Andrew Garst, Ph.D. - Publications

Affiliations: 
2012 Chemistry University of Colorado, Boulder, Boulder, CO, United States 

23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Chen C, Choudhury A, Zhang S, Garst AD, Song X, Liu X, Chen T, Gill RT, Wang Z. Integrating CRISPR-Enabled Trackable Genome Engineering and Transcriptomic Analysis of Global Regulators for Antibiotic Resistance Selection and Identification in Escherichia coli. Msystems. 5. PMID 32317390 DOI: 10.1128/mSystems.00232-20  0.68
2020 Iwasaki RS, Ozdilek BA, Garst AD, Choudhury A, Batey RT. Small molecule regulated sgRNAs enable control of genome editing in E. coli by Cas9. Nature Communications. 11: 1394. PMID 32170140 DOI: 10.1038/S41467-020-15226-8  1
2018 Bassalo MC, Garst AD, Choudhury A, Grau WC, Oh EJ, Spindler E, Lipscomb T, Gill RT. Deep scanning lysine metabolism in . Molecular Systems Biology. 14: e8371. PMID 30478237 DOI: 10.15252/Msb.20188371  0.68
2018 Pines G, Oh EJ, Bassalo MC, Choudhury A, Garst AD, Fankhauser RG, Eckert CA, Gill RT. Genomic Deoxyxylulose Phosphate Reductoisomerase (DXR) Mutations Conferring Resistance to the Antimalarial Drug Fosmidomycin in E. coli. Acs Synthetic Biology. PMID 30462485 DOI: 10.1021/Acssynbio.8B00219  0.68
2018 Liu R, Liang L, Choudhury A, Garst AD, Eckert CA, Oh EJ, Winkler J, Gill RT. Multiplex Navigation of Global Regulatory Networks (MINR) in yeast for Improved Ethanol Tolerance and Production. Metabolic Engineering. PMID 30030154 DOI: 10.1016/J.Ymben.2018.07.007  0.68
2018 Liu R, Liang L, Choudhury A, Bassalo MC, Garst AD, Tarasava K, Gill RT. Iterative Genome Editing of Escherichia coli for 3-Hydroxypropionic Acid Production. Metabolic Engineering. PMID 29665411 DOI: 10.1016/J.Ymben.2018.04.007  0.68
2018 Liu R, Liang L, Garst AD, Choudhury A, Nogué VSI, Beckham GT, Gill RT. Directed combinatorial mutagenesis of Escherichia coli for complex phenotype engineering. Metabolic Engineering. PMID 29477855 DOI: 10.1016/J.Ymben.2018.02.007  0.68
2015 Freed EF, Winkler JD, Weiss SJ, Garst AD, Mutalik VK, Arkin AP, Knight R, Gill RT. Genome-Wide Tuning of Protein Expression Levels to Rapidly Engineer Microbial Traits. Acs Synthetic Biology. PMID 26478262 DOI: 10.1021/Acssynbio.5B00133  1
2015 Halweg-Edwards AL, Grau WC, Winkler JD, Garst AD, Gill RT. The emergence of commodity-scale genetic manipulation. Current Opinion in Chemical Biology. 28: 150-5. PMID 26302383 DOI: 10.1016/J.Cbpa.2015.07.009  1
2015 Zeitoun RI, Garst AD, Degen GD, Pines G, Mansell TJ, Glebes TY, Boyle NR, Gill RT. Multiplexed tracking of combinatorial genomic mutations in engineered cell populations. Nature Biotechnology. 33: 631-7. PMID 25798935 DOI: 10.1038/Nbt.3177  1
2015 Pines G, Pines A, Garst AD, Zeitoun RI, Lynch SA, Gill RT. Codon compression algorithms for saturation mutagenesis. Acs Synthetic Biology. 4: 604-14. PMID 25303315 DOI: 10.1021/Sb500282V  1
2013 Garst A, Lynch M, Evans R, Gill RT. Strategies for the multiplex mapping of genes to traits. Microbial Cell Factories. 12: 99. PMID 24171944 DOI: 10.1186/1475-2859-12-99  1
2013 Ceres P, Garst AD, Marcano-Velázquez JG, Batey RT. Modularity of select riboswitch expression platforms enables facile engineering of novel genetic regulatory devices. Acs Synthetic Biology. 2: 463-72. PMID 23654267 DOI: 10.1021/Sb4000096  1
2013 Nordwald EM, Garst A, Gill RT, Kaar JL. Accelerated protein engineering for chemical biotechnology via homologous recombination. Current Opinion in Biotechnology. 24: 1017-22. PMID 23540421 DOI: 10.1016/J.Copbio.2013.03.003  1
2012 Fiegland LR, Garst AD, Batey RT, Nesbitt DJ. Single-molecule studies of the lysine riboswitch reveal effector-dependent conformational dynamics of the aptamer domain. Biochemistry. 51: 9223-33. PMID 23067368 DOI: 10.1021/Bi3007753  1
2012 Garst AD, Porter EB, Batey RT. Insights into the regulatory landscape of the lysine riboswitch. Journal of Molecular Biology. 423: 17-33. PMID 22771573 DOI: 10.1016/J.Jmb.2012.06.038  1
2011 Garst AD, Edwards AL, Batey RT. Riboswitches: structures and mechanisms. Cold Spring Harbor Perspectives in Biology. 3. PMID 20943759 DOI: 10.1101/Cshperspect.A003533  1
2010 Montange RK, Mondragón E, van Tyne D, Garst AD, Ceres P, Batey RT. Discrimination between closely related cellular metabolites by the SAM-I riboswitch. Journal of Molecular Biology. 396: 761-72. PMID 20006621 DOI: 10.1016/J.Jmb.2009.12.007  1
2009 Reyes FE, Garst AD, Batey RT. Strategies in RNA crystallography. Methods in Enzymology. 469: 119-39. PMID 20946787 DOI: 10.1016/S0076-6879(09)69006-6  1
2009 Garst AD, Batey RT. A switch in time: detailing the life of a riboswitch. Biochimica Et Biophysica Acta. 1789: 584-91. PMID 19595806 DOI: 10.1016/J.Bbagrm.2009.06.004  1
2009 Edwards AL, Garst AD, Batey RT. Determining structures of RNA aptamers and riboswitches by X-ray crystallography. Methods in Molecular Biology (Clifton, N.J.). 535: 135-63. PMID 19377976 DOI: 10.1007/978-1-59745-557-2_9  1
2009 Zysling DA, Garst AD, Demas GE. Photoperiod and food restriction differentially affect reproductive and immune responses in Siberian hamsters Phodopus sungorus Functional Ecology. 23: 979-988. DOI: 10.1111/j.1365-2435.2009.01572.x  1
2008 Garst AD, Héroux A, Rambo RP, Batey RT. Crystal structure of the lysine riboswitch regulatory mRNA element. The Journal of Biological Chemistry. 283: 22347-51. PMID 18593706 DOI: 10.1074/Jbc.C800120200  1
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