Chanseok Shin, Ph.D. - Publications

Affiliations: 
2004 Columbia University, New York, NY 
Area:
mRNA processing

30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Shin SY, Shin C. Regulatory non-coding RNAs in plants: potential gene resources for the improvement of agricultural traits Plant Biotechnology Reports. 1-13. DOI: 10.1007/s11816-016-0389-4  1
2015 Park JH, Shin C. Slicer-independent mechanism drives small-RNA strand separation during human RISC assembly. Nucleic Acids Research. PMID 26384428 DOI: 10.1093/nar/gkv937  1
2015 Park JH, Shin C. The role of plant small RNAs in NB-LRR regulation. Briefings in Functional Genomics. PMID 25777149 DOI: 10.1093/bfgp/elv006  1
2015 Lee HJ, Park YJ, Kwak KJ, Kim D, Park JH, Lim JY, Shin C, Yang KY, Kang H. MicroRNA844-Guided Downregulation of Cytidinephosphate Diacylglycerol Synthase3 (CDS3) mRNA Affects the Response of Arabidopsis thaliana to Bacteria and Fungi. Molecular Plant-Microbe Interactions : Mpmi. MPMI02150028R. PMID 25775269 DOI: 10.1094/MPMI-02-15-0028-R  1
2015 Jayakodi M, Jung JW, Park D, Ahn YJ, Lee SC, Shin SY, Shin C, Yang TJ, Kwon HW. Genome-wide characterization of long intergenic non-coding RNAs (lincRNAs) provides new insight into viral diseases in honey bees Apis cerana and Apis mellifera Bmc Genomics. 16. DOI: 10.1186/s12864-015-1868-7  1
2014 Eichhorn SW, Guo H, McGeary SE, Rodriguez-Mias RA, Shin C, Baek D, Hsu SH, Ghoshal K, Villén J, Bartel DP. mRNA destabilization is the dominant effect of mammalian microRNAs by the time substantial repression ensues. Molecular Cell. 56: 104-15. PMID 25263593 DOI: 10.1016/j.molcel.2014.08.028  1
2014 Park JH, Hong SW, Yun S, Lee DK, Shin C. Effect of siRNA with an asymmetric RNA/dTdT overhang on RNA interference activity. Nucleic Acid Therapeutics. 24: 364-71. PMID 25211666 DOI: 10.1089/nat.2014.0494  1
2014 Park JH, Shin C. MicroRNA-directed cleavage of targets: mechanism and experimental approaches. Bmb Reports. 47: 417-23. PMID 24856832 DOI: 10.5483/BMBRep.2014.47.8.109  1
2014 Hong SW, Park JH, Yun S, Lee CH, Shin C, Lee DK. Effect of the guide strand 3'-end structure on the gene-silencing potency of asymmetric siRNA. The Biochemical Journal. 461: 427-34. PMID 24800867 DOI: 10.1042/BJ20140407  1
2014 Kim S, Park M, Yeom SI, Kim YM, Lee JM, Lee HA, Seo E, Choi J, Cheong K, Kim KT, Jung K, Lee GW, Oh SK, Bae C, Kim SB, ... ... Shin C, et al. Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum species. Nature Genetics. 46: 270-8. PMID 24441736 DOI: 10.1038/ng.2877  1
2013 Hwang DG, Park JH, Lim JY, Kim D, Choi Y, Kim S, Reeves G, Yeom SI, Lee JS, Park M, Kim S, Choi IY, Choi D, Shin C. The hot pepper (Capsicum annuum) microRNA transcriptome reveals novel and conserved targets: a foundation for understanding MicroRNA functional roles in hot pepper. Plos One. 8: e64238. PMID 23737975 DOI: 10.1371/journal.pone.0064238  1
2013 Lee J, Kim DI, Park JH, Choi IY, Shin C. MiRAuto: an automated user-friendly microRNA prediction tool utilizing plant small RNA sequencing data. Molecules and Cells. 35: 342-7. PMID 23625170 DOI: 10.1007/s10059-013-0019-8  1
2013 Lee TY, Chang CI, Lee D, Hong SW, Shin C, Li CJ, Kim S, Haussecker D, Lee DK. RNA interference-mediated simultaneous silencing of four genes using cross-shaped RNA. Molecules and Cells. 35: 320-6. PMID 23563800 DOI: 10.1007/s10059-013-2316-7  1
2013 Park JH, Ahn S, Kim S, Lee J, Nam JW, Shin C. Degradome sequencing reveals an endogenous microRNA target in C. elegans. Febs Letters. 587: 964-9. PMID 23485825 DOI: 10.1016/j.febslet.2013.02.029  1
2012 Kim J, Park JH, Lim CJ, Lim JY, Ryu JY, Lee BW, Choi JP, Kim WB, Lee HY, Choi Y, Kim D, Hur CG, Kim S, Noh YS, Shin C, et al. Small RNA and transcriptome deep sequencing proffers insight into floral gene regulation in Rosa cultivars. Bmc Genomics. 13: 657. PMID 23171001 DOI: 10.1186/1471-2164-13-657  1
2012 Lee D, Shin C. MicroRNA-target interactions: new insights from genome-wide approaches. Annals of the New York Academy of Sciences. 1271: 118-28. PMID 23050973 DOI: 10.1111/j.1749-6632.2012.06745.x  1
2011 Garcia DM, Baek D, Shin C, Bell GW, Grimson A, Bartel DP. Weak seed-pairing stability and high target-site abundance decrease the proficiency of lsy-6 and other microRNAs. Nature Structural & Molecular Biology. 18: 1139-46. PMID 21909094 DOI: 10.1038/nsmb.2115  1
2011 Flygare J, Rayon Estrada V, Shin C, Gupta S, Lodish HF. HIF1alpha synergizes with glucocorticoids to promote BFU-E progenitor self-renewal. Blood. 117: 3435-44. PMID 21177435 DOI: 10.1182/blood-2010-07-295550  1
2010 Shin C, Nam JW, Farh KK, Chiang HR, Shkumatava A, Bartel DP. Expanding the microRNA targeting code: functional sites with centered pairing. Molecular Cell. 38: 789-802. PMID 20620952 DOI: 10.1016/j.molcel.2010.06.005  1
2008 Baek D, Villén J, Shin C, Camargo FD, Gygi SP, Bartel DP. The impact of microRNAs on protein output. Nature. 455: 64-71. PMID 18668037 DOI: 10.1038/nature07242  1
2006 Marin-Vinader L, Shin C, Onnekink C, Manley JL, Lubsen NH. Hsp27 enhances recovery of splicing as well as rephosphorylation of SRp38 after heat shock. Molecular Biology of the Cell. 17: 886-94. PMID 16339078 DOI: 10.1091/mbc.E05-07-0596  1
2005 Matranga C, Tomari Y, Shin C, Bartel DP, Zamore PD. Passenger-strand cleavage facilitates assembly of siRNA into Ago2-containing RNAi enzyme complexes. Cell. 123: 607-20. PMID 16271386 DOI: 10.1016/j.cell.2005.08.044  1
2005 Shin C, Kleiman FE, Manley JL. Multiple properties of the splicing repressor SRp38 distinguish it from typical SR proteins. Molecular and Cellular Biology. 25: 8334-43. PMID 16135820 DOI: 10.1128/MCB.25.18.8334-8343.2005  1
2004 Shin C, Manley JL. Cell signalling and the control of pre-mRNA splicing. Nature Reviews. Molecular Cell Biology. 5: 727-38. PMID 15340380 DOI: 10.1038/nrm1467  1
2004 Shin C, Feng Y, Manley JL. Dephosphorylated SRp38 acts as a splicing repressor in response to heat shock. Nature. 427: 553-8. PMID 14765198 DOI: 10.1038/nature02288  1
2003 Shin C, Manley JL. Role of Alternative Splicing During the Cell Cycle and Programmed Cell Death Handbook of Cell Signaling. 3: 331-334. DOI: 10.1016/B978-012124546-7/50682-3  1
2002 Shin C, Manley JL. The SR protein SRp38 represses splicing in M phase cells. Cell. 111: 407-17. PMID 12419250 DOI: 10.1016/S0092-8674(02)01038-3  1
2000 Lim JY, Shin CS, Chung EJ, Kim JS, Kim HU, Oh SJ, Choi WB, Ryou CS, Kim JB, Kwon MS, Chung TY, Song SI, Kim JK, Nahm BH, Hwang YS, et al. Analysis of expressed sequence tags from Brassica rapa L. ssp. pekinensis Molecules and Cells. 10: 399-404. PMID 10987136  1
1996 Shin C, Choi JN, Song SI, Song JT, Ahn JH, Lee JS, Choi YD. The loop B domain is physically separable from the loop A domain in the hairpin ribozyme Nucleic Acids Research. 24: 2685-2689. PMID 8758996 DOI: 10.1093/nar/24.14.2685  1
1996 Shin C, Choi JN, Song SI, Song JT, Ahn JH, Lee JS, Choi YD. Site-specific cleavage of RNA encoding garlic latent virus coat protein by a hairpin type ribozyme Molecules and Cells. 6: 209-214.  1
Show low-probability matches.