Yoav Gilad - Publications

Affiliations: 
University of Chicago, Chicago, IL 
Area:
Olfaction
Website:
http://giladlab.uchicago.edu/index.htm

109 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Pavlovic BJ, Blake LE, Roux J, Chavarria C, Gilad Y. A Comparative Assessment of Human and Chimpanzee iPSC-derived Cardiomyocytes with Primary Heart Tissues. Scientific Reports. 8: 15312. PMID 30333510 DOI: 10.1038/s41598-018-33478-9  0.32
2018 Blake LE, Thomas SM, Blischak JD, Hsiao CJ, Chavarria C, Myrthil M, Gilad Y, Pavlovic BJ. A comparative study of endoderm differentiation in humans and chimpanzees. Genome Biology. 19: 162. PMID 30322406 DOI: 10.1186/s13059-018-1490-5  0.44
2018 Knowles DA, Burrows CK, Blischak JD, Patterson KM, Serie DJ, Norton N, Ober C, Pritchard JK, Gilad Y. Determining the genetic basis of anthracycline-cardiotoxicity by response QTL mapping in induced cardiomyocytes. Elife. 7. PMID 29737278 DOI: 10.7554/eLife.33480  0.44
2018 Ward MC, Zhao S, Luo K, Pavlovic BJ, Karimi MM, Stephens M, Gilad Y. Silencing of transposable elements may not be a major driver of regulatory evolution in primate iPSCs. Elife. 7. PMID 29648536 DOI: 10.7554/eLife.33084  0.44
2017 Banovich NE, Li YI, Raj A, Ward MC, Greenside P, Calderon D, Tung PY, Burnett JE, Myrthil M, Thomas SM, Burrows CK, Romero IG, Pavlovic BJ, Kundaje A, Pritchard JK, ... Gilad Y, et al. Impact of regulatory variation across human iPSCs and differentiated cells. Genome Research. PMID 29208628 DOI: 10.1101/gr.224436.117  0.44
2017 Blischak JD, Tailleux L, Myrthil M, Charlois C, Bergot E, Dinh A, Morizot G, Chény O, Platen CV, Herrmann JL, Brosch R, Barreiro LB, Gilad Y. Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells. Scientific Reports. 7: 5702. PMID 28720766 DOI: 10.1038/s41598-017-05878-w  0.44
2017 Montefiori L, Hernandez L, Zhang Z, Gilad Y, Ober C, Crawford G, Nobrega M, Jo Sakabe N. Reducing mitochondrial reads in ATAC-seq using CRISPR/Cas9. Scientific Reports. 7: 2451. PMID 28550296 DOI: 10.1038/s41598-017-02547-w  0.44
2017 Igartua C, Davenport ER, Gilad Y, Nicolae DL, Pinto J, Ober C. Host genetic variation in mucosal immunity pathways influences the upper airway microbiome. Microbiome. 5: 16. PMID 28143570 DOI: 10.1186/s40168-016-0227-5  0.44
2017 Tung PY, Blischak JD, Hsiao CJ, Knowles DA, Burnett JE, Pritchard JK, Gilad Y. Batch effects and the effective design of single-cell gene expression studies. Scientific Reports. 7: 39921. PMID 28045081 DOI: 10.1038/srep39921  0.44
2016 Nicodemus-Johnson J, Myers RA, Sakabe NJ, Sobreira DR, Hogarth DK, Naureckas ET, Sperling AI, Solway J, White SR, Nobrega MA, Nicolae DL, Gilad Y, Ober C. DNA methylation in lung cells is associated with asthma endotypes and genetic risk. Jci Insight. 1: e90151. PMID 27942592 DOI: 10.1172/jci.insight.90151  0.44
2016 Olender T, Keydar I, Pinto JM, Tatarskyy P, Alkelai A, Chien MS, Fishilevich S, Restrepo D, Matsunami H, Gilad Y, Lancet D. The human olfactory transcriptome. Bmc Genomics. 17: 619. PMID 27515280 DOI: 10.1186/s12864-016-2960-3  0.92
2016 Raj A, Wang SH, Shim H, Harpak A, Li YI, Engelmann B, Stephens M, Gilad Y, Pritchard JK. Thousands of novel translated open reading frames in humans inferred by ribosome footprint profiling. Elife. 5. PMID 27232982 DOI: 10.7554/eLife.13328  0.92
2016 Li YI, van de Geijn B, Raj A, Knowles DA, Petti AA, Golan D, Gilad Y, Pritchard JK. RNA splicing is a primary link between genetic variation and disease. Science (New York, N.Y.). 352: 600-4. PMID 27126046 DOI: 10.1126/science.aad9417  0.92
2016 Igartua C, Davenport ER, Chupp GL, Elias JA, Gilad Y, Ober C, Pinto JM. Nasal Microbiome Composition Is Associated with Chitotriosidase (Chit1) Activity in Adult Hutterites. Annals of the American Thoracic Society. 13: S100-1. PMID 27027937 DOI: 10.1513/AnnalsATS.201508-521MG  0.44
2016 Cusanovich DA, Caliskan M, Billstrand C, Michelini K, Chavarria C, De Leon S, Mitrano A, Lewellyn N, Elias JA, Chupp GL, Lang RM, Shah SJ, DeCara JM, Gilad Y, Ober C. Integrated Analyses of Gene Expression and Genetic Association Studies in a Founder Population. Human Molecular Genetics. PMID 26931462 DOI: 10.1093/hmg/ddw061  0.44
2016 Burrows CK, Banovich NE, Pavlovic BJ, Patterson K, Gallego Romero I, Pritchard JK, Gilad Y. Genetic Variation, Not Cell Type of Origin, Underlies the Majority of Identifiable Regulatory Differences in iPSCs. Plos Genetics. 12: e1005793. PMID 26812582 DOI: 10.1371/journal.pgen.1005793  0.92
2015 Blischak JD, Tailleux L, Mitrano A, Barreiro LB, Gilad Y. Mycobacterial infection induces a specific human innate immune response. Scientific Reports. 5: 16882. PMID 26586179 DOI: 10.1038/srep16882  0.92
2015 Davenport ER, Cusanovich DA, Michelini K, Barreiro LB, Ober C, Gilad Y. Genome-Wide Association Studies of the Human Gut Microbiota. Plos One. 10: e0140301. PMID 26528553 DOI: 10.1371/journal.pone.0140301  0.92
2015 Raj A, Shim H, Gilad Y, Pritchard JK, Stephens M. msCentipede: Modeling Heterogeneity across Genomic Sites and Replicates Improves Accuracy in the Inference of Transcription Factor Binding. Plos One. 10: e0138030. PMID 26406244 DOI: 10.1371/journal.pone.0138030  0.92
2015 Pacis A, Tailleux L, Morin AM, Lambourne J, Maclsaac JL, Yotova V, Dumaine A, Danckaert A, Luca F, Grenier JC, Hansen KD, Gicquel B, Yu M, Pai A, He C, ... ... Gilad Y, et al. Bacterial infection remodels the DNA methylation landscape of human dendritic cells. Genome Research. PMID 26392366 DOI: 10.1101/gr.192005.115  0.92
2015 van de Geijn B, McVicker G, Gilad Y, Pritchard JK. WASP: allele-specific software for robust molecular quantitative trait locus discovery. Nature Methods. 12: 1061-3. PMID 26366987 DOI: 10.1038/nmeth.3582  0.92
2015 Frankenberger C, Rabe D, Bainer R, Sankarasharma D, Chada K, Krausz T, Gilad Y, Becker L, Rosner MR. Metastasis suppressors regulate the tumor microenvironment by blocking recruitment of pro-metastatic tumor-associated macrophages. Cancer Research. PMID 26238785 DOI: 10.1158/0008-5472.CAN-14-3394  0.92
2015 Gilad Y, Mizrahi-Man O. A reanalysis of mouse ENCODE comparative gene expression data. F1000research. 4: 121. PMID 26236466 DOI: 10.12688/f1000research.6536.1  0.92
2015 Gallego Romero I, Pavlovic BJ, Hernando-Herraez I, Zhou X, Ward MC, Banovich NE, Kagan CL, Burnett JE, Huang CH, Mitrano A, Chavarria CI, Friedrich Ben-Nun I, Li Y, Sabatini K, Leonardo TR, ... ... Gilad Y, et al. A panel of induced pluripotent stem cells from chimpanzees: a resource for comparative functional genomics. Elife. 4. PMID 26102527 DOI: 10.7554/eLife.07103  0.44
2015 Thomas SM, Kagan C, Pavlovic BJ, Burnett J, Patterson K, Pritchard JK, Gilad Y. Reprogramming LCLs to iPSCs Results in Recovery of Donor-Specific Gene Expression Signature. Plos Genetics. 11: e1005216. PMID 25950834 DOI: 10.1371/journal.pgen.1005216  0.92
2015 Çal??kan M, Baker SW, Gilad Y, Ober C. Host genetic variation influences gene expression response to rhinovirus infection. Plos Genetics. 11: e1005111. PMID 25874939 DOI: 10.1371/journal.pgen.1005111  0.92
2015 Tung J, Zhou X, Alberts SC, Stephens M, Gilad Y. The genetic architecture of gene expression levels in wild baboons. Elife. 4. PMID 25714927 DOI: 10.7554/eLife.04729  0.92
2015 Battle A, Khan Z, Wang SH, Mitrano A, Ford MJ, Pritchard JK, Gilad Y. Genomic variation. Impact of regulatory variation from RNA to protein. Science (New York, N.Y.). 347: 664-7. PMID 25657249 DOI: 10.1126/science.1260793  0.92
2015 Pai AA, Pritchard JK, Gilad Y. The genetic and mechanistic basis for variation in gene regulation. Plos Genetics. 11: e1004857. PMID 25569255 DOI: 10.1371/journal.pgen.1004857  0.92
2015 Romero IG, Pavlovic BJ, Hernando-Herraez I, Zhou X, Ward MC, Banovich NE, Kagan CL, Burnett JE, Huang CH, Mitrano A, Chavarria CI, Ben-Nun IF, Li Y, Sabatini K, Leonardo TR, ... ... Gilad Y, et al. A panel of induced pluripotent stem cells from chimpanzees: A resource for comparative functional genomics Elife. 4: 1-29. DOI: 10.7554/eLife.07103.001  0.92
2014 Zhou X, Cain CE, Myrthil M, Lewellen N, Michelini K, Davenport ER, Stephens M, Pritchard JK, Gilad Y. Epigenetic modifications are associated with inter-species gene expression variation in primates. Genome Biology. 15: 547. PMID 25468404 DOI: 10.1186/s13059-014-0547-3  0.92
2014 Banovich NE, Lan X, McVicker G, van de Geijn B, Degner JF, Blischak JD, Roux J, Pritchard JK, Gilad Y. Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels. Plos Genetics. 10: e1004663. PMID 25233095 DOI: 10.1371/journal.pgen.1004663  0.92
2014 Pai AA, Gilad Y. Comparative studies of gene regulatory mechanisms. Current Opinion in Genetics & Development. 29: 68-74. PMID 25215415 DOI: 10.1016/j.gde.2014.08.010  0.92
2014 Çal??kan M, Pritchard JK, Ober C, Gilad Y. The effect of freeze-thaw cycles on gene expression levels in lymphoblastoid cell lines. Plos One. 9: e107166. PMID 25192014 DOI: 10.1371/journal.pone.0107166  0.92
2014 Blekhman R, Perry GH, Shahbaz S, Fiehn O, Clark AG, Gilad Y. Comparative metabolomics in primates reveals the effects of diet and gene regulatory variation on metabolic divergence. Scientific Reports. 4: 5809. PMID 25069065 DOI: 10.1038/srep05809  0.92
2014 Gallego Romero I, Pai AA, Tung J, Gilad Y. RNA-seq: impact of RNA degradation on transcript quantification. Bmc Biology. 12: 42. PMID 24885439 DOI: 10.1186/1741-7007-12-42  0.92
2014 Davenport ER, Mizrahi-Man O, Michelini K, Barreiro LB, Ober C, Gilad Y. Seasonal variation in human gut microbiome composition. Plos One. 9: e90731. PMID 24618913 DOI: 10.1371/journal.pone.0090731  0.92
2014 Cusanovich DA, Pavlovic B, Pritchard JK, Gilad Y. The functional consequences of variation in transcription factor binding. Plos Genetics. 10: e1004226. PMID 24603674 DOI: 10.1371/journal.pgen.1004226  0.92
2014 Frumin I, Sobel N, Gilad Y. Does a unique olfactory genome imply a unique olfactory world? Nature Neuroscience. 17: 6-8. PMID 24369370 DOI: 10.1038/nn.3608  0.92
2013 Schwalie PC, Ward MC, Cain CE, Faure AJ, Gilad Y, Odom DT, Flicek P. Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomes. Genome Biology. 14: R148. PMID 24380390 DOI: 10.1186/gb-2013-14-12-r148  0.92
2013 McVicker G, van de Geijn B, Degner JF, Cain CE, Banovich NE, Raj A, Lewellen N, Myrthil M, Gilad Y, Pritchard JK. Identification of genetic variants that affect histone modifications in human cells. Science (New York, N.Y.). 342: 747-9. PMID 24136359 DOI: 10.1126/science.1242429  0.92
2013 Khan Z, Ford MJ, Cusanovich DA, Mitrano A, Pritchard JK, Gilad Y. Primate transcript and protein expression levels evolve under compensatory selection pressures. Science (New York, N.Y.). 342: 1100-4. PMID 24136357 DOI: 10.1126/science.1242379  0.92
2013 Tung J, Gilad Y. Social environmental effects on gene regulation. Cellular and Molecular Life Sciences : Cmls. 70: 4323-39. PMID 23685902 DOI: 10.1007/s00018-013-1357-6  0.92
2013 Mizrahi-Man O, Davenport ER, Gilad Y. Taxonomic classification of bacterial 16S rRNA genes using short sequencing reads: evaluation of effective study designs. Plos One. 8: e53608. PMID 23308262 DOI: 10.1371/journal.pone.0053608  0.92
2013 Keydar I, Ben-Asher E, Feldmesser E, Nativ N, Oshimoto A, Restrepo D, Matsunami H, Chien MS, Pinto JM, Gilad Y, Olender T, Lancet D. General olfactory sensitivity database (GOSdb): candidate genes and their genomic variations. Human Mutation. 34: 32-41. PMID 22936402 DOI: 10.1002/humu.22212  0.92
2012 Gaffney DJ, McVicker G, Pai AA, Fondufe-Mittendorf YN, Lewellen N, Michelini K, Widom J, Gilad Y, Pritchard JK. Controls of nucleosome positioning in the human genome. Plos Genetics. 8: e1003036. PMID 23166509 DOI: 10.1371/journal.pgen.1003036  0.92
2012 Pai AA, Cain CE, Mizrahi-Man O, De Leon S, Lewellen N, Veyrieras JB, Degner JF, Gaffney DJ, Pickrell JK, Stephens M, Pritchard JK, Gilad Y. The contribution of RNA decay quantitative trait loci to inter-individual variation in steady-state gene expression levels. Plos Genetics. 8: e1003000. PMID 23071454 DOI: 10.1371/journal.pgen.1003000  0.92
2012 Ecker JR, Bickmore WA, Barroso I, Pritchard JK, Gilad Y, Segal E. Genomics: ENCODE explained. Nature. 489: 52-5. PMID 22955614 DOI: 10.1038/489052a  0.92
2012 Iskow RC, Gokcumen O, Abyzov A, Malukiewicz J, Zhu Q, Sukumar AT, Pai AA, Mills RE, Habegger L, Cusanovich DA, Rubel MA, Perry GH, Gerstein M, Stone AC, Gilad Y, et al. Regulatory element copy number differences shape primate expression profiles. Proceedings of the National Academy of Sciences of the United States of America. 109: 12656-61. PMID 22797897 DOI: 10.1073/pnas.1205199109  0.92
2012 Romero IG, Ruvinsky I, Gilad Y. Comparative studies of gene expression and the evolution of gene regulation. Nature Reviews. Genetics. 13: 505-16. PMID 22705669 DOI: 10.1038/nrg3229  0.92
2012 Tung J, Barreiro LB, Johnson ZP, Hansen KD, Michopoulos V, Toufexis D, Michelini K, Wilson ME, Gilad Y. Social environment is associated with gene regulatory variation in the rhesus macaque immune system. Proceedings of the National Academy of Sciences of the United States of America. 109: 6490-5. PMID 22493251 DOI: 10.1073/pnas.1202734109  0.92
2012 Pickrell JK, Gilad Y, Pritchard JK. Comment on "Widespread RNA and DNA sequence differences in the human transcriptome". Science (New York, N.Y.). 335: 1302; author reply 1. PMID 22422963 DOI: 10.1126/science.1210484  0.92
2012 Gilad Y. Using genomic tools to study regulatory evolution. Methods in Molecular Biology (Clifton, N.J.). 856: 335-61. PMID 22399466 DOI: 10.1007/978-1-61779-585-5_14  0.92
2012 Veyrieras JB, Gaffney DJ, Pickrell JK, Gilad Y, Stephens M, Pritchard JK. Exon-specific QTLs skew the inferred distribution of expression QTLs detected using gene expression array data. Plos One. 7: e30629. PMID 22359548 DOI: 10.1371/journal.pone.0030629  0.92
2012 Bainer RO, Veneris JT, Yamada SD, Montag A, Lingen MW, Gilad Y, Rinker-Schaeffer CW. Time-dependent transcriptional profiling links gene expression to mitogen-activated protein kinase kinase 4 (MKK4)-mediated suppression of omental metastatic colonization. Clinical & Experimental Metastasis. 29: 397-408. PMID 22350525 DOI: 10.1007/s10585-011-9448-y  0.92
2012 Degner JF, Pai AA, Pique-Regi R, Veyrieras JB, Gaffney DJ, Pickrell JK, De Leon S, Michelini K, Lewellen N, Crawford GE, Stephens M, Gilad Y, Pritchard JK. DNase I sensitivity QTLs are a major determinant of human expression variation. Nature. 482: 390-4. PMID 22307276 DOI: 10.1038/nature10808  0.92
2012 Gaffney DJ, Veyrieras JB, Degner JF, Pique-Regi R, Pai AA, Crawford GE, Stephens M, Gilad Y, Pritchard JK. Dissecting the regulatory architecture of gene expression QTLs. Genome Biology. 13: R7. PMID 22293038 DOI: 10.1186/gb-2012-13-1-r7  0.92
2012 Cusanovich DA, Billstrand C, Zhou X, Chavarria C, De Leon S, Michelini K, Pai AA, Ober C, Gilad Y. The combination of a genome-wide association study of lymphocyte count and analysis of gene expression data reveals novel asthma candidate genes. Human Molecular Genetics. 21: 2111-23. PMID 22286170 DOI: 10.1093/hmg/dds021  0.92
2012 Barreiro LB, Tailleux L, Pai AA, Gicquel B, Marioni JC, Gilad Y. Deciphering the genetic architecture of variation in the immune response to Mycobacterium tuberculosis infection. Proceedings of the National Academy of Sciences of the United States of America. 109: 1204-9. PMID 22233810 DOI: 10.1073/pnas.1115761109  0.92
2012 Perry GH, Melsted P, Marioni JC, Wang Y, Bainer R, Pickrell JK, Michelini K, Zehr S, Yoder AD, Stephens M, Pritchard JK, Gilad Y. Comparative RNA sequencing reveals substantial genetic variation in endangered primates. Genome Research. 22: 602-10. PMID 22207615 DOI: 10.1101/gr.130468.111  0.92
2012 Perry GH, Reeves D, Melsted P, Ratan A, Miller W, Michelini K, Louis EE, Pritchard JK, Mason CE, Gilad Y. A genome sequence resource for the aye-aye (Daubentonia madagascariensis), a nocturnal lemur from Madagascar. Genome Biology and Evolution. 4: 126-35. PMID 22155688 DOI: 10.1093/gbe/evr132  0.92
2011 Pickrell JK, Gaffney DJ, Gilad Y, Pritchard JK. False positive peaks in ChIP-seq and other sequencing-based functional assays caused by unannotated high copy number regions. Bioinformatics (Oxford, England). 27: 2144-6. PMID 21690102 DOI: 10.1093/bioinformatics/btr354  0.92
2011 Pai AA, Bell JT, Marioni JC, Pritchard JK, Gilad Y. A genome-wide study of DNA methylation patterns and gene expression levels in multiple human and chimpanzee tissues. Plos Genetics. 7: e1001316. PMID 21383968 DOI: 10.1371/journal.pgen.1001316  0.92
2011 Cain CE, Blekhman R, Marioni JC, Gilad Y. Gene expression differences among primates are associated with changes in a histone epigenetic modification. Genetics. 187: 1225-34. PMID 21321133 DOI: 10.1534/genetics.110.126177  0.92
2011 Caliskan M, Cusanovich DA, Ober C, Gilad Y. The effects of EBV transformation on gene expression levels and methylation profiles. Human Molecular Genetics. 20: 1643-52. PMID 21289059 DOI: 10.1093/hmg/ddr041  0.92
2011 Bell JT, Pai AA, Pickrell JK, Gaffney DJ, Pique-Regi R, Degner JF, Gilad Y, Pritchard JK. DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines. Genome Biology. 12: R10. PMID 21251332 DOI: 10.1186/gb-2011-12-1-r10  0.92
2011 Pique-Regi R, Degner JF, Pai AA, Gaffney DJ, Gilad Y, Pritchard JK. Accurate inference of transcription factor binding from DNA sequence and chromatin accessibility data. Genome Research. 21: 447-55. PMID 21106904 DOI: 10.1101/gr.112623.110  0.92
2011 Bell JT, Pai AA, Pickrell JK, Gaffney DJ, Pique-Regi R, Degner JF, Gilad Y, Pritchard JK. Correction: DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines Genome Biology. 12. DOI: 10.1186/gb-2011-12-6-405  0.92
2010 Barreiro LB, Marioni JC, Blekhman R, Stephens M, Gilad Y. Functional comparison of innate immune signaling pathways in primates. Plos Genetics. 6: e1001249. PMID 21187902 DOI: 10.1371/journal.pgen.1001249  0.92
2010 Pickrell JK, Pai AA, Gilad Y, Pritchard JK. Noisy splicing drives mRNA isoform diversity in human cells. Plos Genetics. 6: e1001236. PMID 21151575 DOI: 10.1371/journal.pgen.1001236  0.92
2010 Perry GH, Marioni JC, Melsted P, Gilad Y. Genomic-scale capture and sequencing of endogenous DNA from feces. Molecular Ecology. 19: 5332-44. PMID 21054605 DOI: 10.1111/j.1365-294X.2010.04888.x  0.92
2010 Pickrell JK, Marioni JC, Pai AA, Degner JF, Engelhardt BE, Nkadori E, Veyrieras JB, Stephens M, Gilad Y, Pritchard JK. Understanding mechanisms underlying human gene expression variation with RNA sequencing. Nature. 464: 768-72. PMID 20220758 DOI: 10.1038/nature08872  0.92
2010 Blekhman R, Marioni JC, Zumbo P, Stephens M, Gilad Y. Sex-specific and lineage-specific alternative splicing in primates. Genome Research. 20: 180-9. PMID 20009012 DOI: 10.1101/gr.099226.109  0.92
2010 Gilad Y. Olfactory receptor genes: Human loss during evolution Encyclopedia of Neuroscience. 157-161. DOI: 10.1016/B978-008045046-9.00972-4  0.92
2009 Degner JF, Marioni JC, Pai AA, Pickrell JK, Nkadori E, Gilad Y, Pritchard JK. Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data. Bioinformatics (Oxford, England). 25: 3207-12. PMID 19808877 DOI: 10.1093/bioinformatics/btp579  0.92
2009 Gilad Y, Pritchard JK, Thornton K. Characterizing natural variation using next-generation sequencing technologies. Trends in Genetics : Tig. 25: 463-71. PMID 19801172 DOI: 10.1016/j.tig.2009.09.003  0.92
2009 Bullaughey K, Chavarria CI, Coop G, Gilad Y. Expression quantitative trait loci detected in cell lines are often present in primary tissues. Human Molecular Genetics. 18: 4296-303. PMID 19671653 DOI: 10.1093/hmg/ddp382  0.92
2009 Blekhman R, Oshlack A, Gilad Y. Segmental duplications contribute to gene expression differences between humans and chimpanzees. Genetics. 182: 627-30. PMID 19332884 DOI: 10.1534/genetics.108.099960  0.92
2009 Degenhardt JD, de Candia P, Chabot A, Schwartz S, Henderson L, Ling B, Hunter M, Jiang Z, Palermo RE, Katze M, Eichler EE, Ventura M, Rogers J, Marx P, Gilad Y, et al. Copy number variation of CCL3-like genes affects rate of progression to simian-AIDS in Rhesus Macaques (Macaca mulatta). Plos Genetics. 5: e1000346. PMID 19165326 DOI: 10.1371/journal.pgen.1000346  0.92
2009 De la Cruz O, Blekhman R, Zhang X, Nicolae D, Firestein S, Gilad Y. A signature of evolutionary constraint on a subset of ectopically expressed olfactory receptor genes. Molecular Biology and Evolution. 26: 491-4. PMID 19103638 DOI: 10.1093/molbev/msn294  0.92
2008 Blekhman R, Oshlack A, Chabot AE, Smyth GK, Gilad Y. Gene regulation in primates evolves under tissue-specific selection pressures. Plos Genetics. 4: e1000271. PMID 19023414 DOI: 10.1371/journal.pgen.1000271  0.92
2008 Ober C, Loisel DA, Gilad Y. Sex-specific genetic architecture of human disease. Nature Reviews. Genetics. 9: 911-22. PMID 19002143 DOI: 10.1038/nrg2415  0.92
2008 Veyrieras JB, Kudaravalli S, Kim SY, Dermitzakis ET, Gilad Y, Stephens M, Pritchard JK. High-resolution mapping of expression-QTLs yields insight into human gene regulation. Plos Genetics. 4: e1000214. PMID 18846210 DOI: 10.1371/journal.pgen.1000214  0.92
2008 Gilad Y, Rifkin SA, Pritchard JK. Revealing the architecture of gene regulation: the promise of eQTL studies. Trends in Genetics : Tig. 24: 408-15. PMID 18597885 DOI: 10.1016/j.tig.2008.06.001  0.44
2008 Reinius B, Saetre P, Leonard JA, Blekhman R, Merino-Martinez R, Gilad Y, Jazin E. An evolutionarily conserved sexual signature in the primate brain. Plos Genetics. 4: e1000100. PMID 18566661 DOI: 10.1371/journal.pgen.1000100  0.92
2008 Marioni JC, Mason CE, Mane SM, Stephens M, Gilad Y. RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays. Genome Research. 18: 1509-17. PMID 18550803 DOI: 10.1101/gr.079558.108  0.92
2008 de Candia P, Blekhman R, Chabot AE, Oshlack A, Gilad Y. A combination of genomic approaches reveals the role of FOXO1a in regulating an oxidative stress response pathway. Plos One. 3: e1670. PMID 18301748 DOI: 10.1371/journal.pone.0001670  0.92
2007 Man O, Willhite DC, Crasto CJ, Shepherd GM, Gilad Y. A framework for exploring functional variability in olfactory receptor genes. Plos One. 2: e682. PMID 17668060 DOI: 10.1371/journal.pone.0000682  0.92
2007 Chabot A, Shrit RA, Blekhman R, Gilad Y. Using reporter gene assays to identify cis regulatory differences between humans and chimpanzees. Genetics. 176: 2069-76. PMID 17565944 DOI: 10.1534/genetics.107.073429  0.92
2007 Zhang X, De la Cruz O, Pinto JM, Nicolae D, Firestein S, Gilad Y. Characterizing the expression of the human olfactory receptor gene family using a novel DNA microarray. Genome Biology. 8: R86. PMID 17509148 DOI: 10.1186/gb-2007-8-5-r86  0.92
2007 Oshlack A, Chabot AE, Smyth GK, Gilad Y. Using DNA microarrays to study gene expression in closely related species. Bioinformatics (Oxford, England). 23: 1235-42. PMID 17384014 DOI: 10.1093/bioinformatics/btm111  0.92
2006 Gilad Y, Borevitz J. Using DNA microarrays to study natural variation. Current Opinion in Genetics & Development. 16: 553-8. PMID 17008090 DOI: 10.1016/j.gde.2006.09.005  0.92
2006 Gilad Y, Oshlack A, Rifkin SA. Natural selection on gene expression. Trends in Genetics : Tig. 22: 456-61. PMID 16806568 DOI: 10.1016/j.tig.2006.06.002  0.6
2006 Gilad Y, Oshlack A, Smyth GK, Speed TP, White KP. Expression profiling in primates reveals a rapid evolution of human transcription factors. Nature. 440: 242-5. PMID 16525476 DOI: 10.1038/nature04559  0.92
2005 Gilad Y, Man O, Glusman G. A comparison of the human and chimpanzee olfactory receptor gene repertoires. Genome Research. 15: 224-30. PMID 15687286 DOI: 10.1101/gr.2846405  0.92
2005 Fischer A, Gilad Y, Man O, Pääbo S. Evolution of bitter taste receptors in humans and apes. Molecular Biology and Evolution. 22: 432-6. PMID 15496549 DOI: 10.1093/molbev/msi027  0.92
2004 Ptak SE, Roeder AD, Stephens M, Gilad Y, Pääbo S, Przeworski M. Absence of the TAP2 human recombination hotspot in chimpanzees. Plos Biology. 2: e155. PMID 15208713 DOI: 10.1371/journal.pbio.0020155  0.92
2004 Gilad Y, Wiebe V, Przeworski M, Lancet D, Pääbo S. Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates. Plos Biology. 2: E5. PMID 14737185 DOI: 10.1371/journal.pbio.0020005  0.92
2004 Man O, Gilad Y, Lancet D. Prediction of the odorant binding site of olfactory receptor proteins by human-mouse comparisons. Protein Science : a Publication of the Protein Society. 13: 240-54. PMID 14691239 DOI: 10.1110/ps.03296404  0.92
2003 Gilad Y, Bustamante CD, Lancet D, Pääbo S. Natural selection on the olfactory receptor gene family in humans and chimpanzees. American Journal of Human Genetics. 73: 489-501. PMID 12908129 DOI: 10.1086/378132  0.92
2003 Kol R, Pelled O, Canfi A, Gilad Y, German U, Laichter Y, Lantsberg S, Fuksbrauner R, Gold B. The interference of medical radionuclides with occupational in vivo gamma spectrometry. Health Physics. 84: 756-63. PMID 12822585 DOI: 10.1097/00004032-200306000-00008  0.92
2003 Menashe I, Man O, Lancet D, Gilad Y. Different noses for different people. Nature Genetics. 34: 143-4. PMID 12730696 DOI: 10.1038/ng1160  0.92
2003 Gilad Y, Lancet D. Population differences in the human functional olfactory repertoire. Molecular Biology and Evolution. 20: 307-14. PMID 12644552 DOI: 10.1093/molbev/msg013  0.92
2003 Gilad Y, Man O, Pääbo S, Lancet D. Human specific loss of olfactory receptor genes. Proceedings of the National Academy of Sciences of the United States of America. 100: 3324-7. PMID 12612342 DOI: 10.1073/pnas.0535697100  0.92
2002 Gilad Y, Rosenberg S, Przeworski M, Lancet D, Skorecki K. Evidence for positive selection and population structure at the human MAO-A gene. Proceedings of the National Academy of Sciences of the United States of America. 99: 862-7. PMID 11805333 DOI: 10.1073/pnas.022614799  0.92
2001 Lapidot M, Pilpel Y, Gilad Y, Falcovitz A, Sharon D, Haaf T, Lancet D. Mouse-human orthology relationships in an olfactory receptor gene cluster. Genomics. 71: 296-306. PMID 11170746 DOI: 10.1006/geno.2000.6431  0.92
2001 Conticello SG, Gilad Y, Avidan N, Ben-Asher E, Levy Z, Fainzilber M. Mechanisms for evolving hypervariability: the case of conopeptides. Molecular Biology and Evolution. 18: 120-31. PMID 11158371  0.92
2000 Sharon D, Gilad Y, Glusman G, Khen M, Lancet D, Kalush F. Identification and characterization of coding single-nucleotide polymorphisms within a human olfactory receptor gene cluster. Gene. 260: 87-94. PMID 11137294 DOI: 10.1016/S0378-1119(00)00467-4  0.92
2000 Gilad Y, Segré D, Skorecki K, Nachman MW, Lancet D, Sharon D. Dichotomy of single-nucleotide polymorphism haplotypes in olfactory receptor genes and pseudogenes. Nature Genetics. 26: 221-4. PMID 11017082 DOI: 10.1038/79957  0.92
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