Stephen M. Mount - Publications

Affiliations: 
University of Maryland, College Park, College Park, MD 
Area:
RNA splicing
Website:
http://stevemount.org

53 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Rahmatpour N, Kuo LY, Kang J, Herman E, Lei L, Li M, Srinivasan S, Zipper R, Wolniak SM, Delwiche CF, Mount S, Li FW. Analyses of Marsilea vestita genome and transcriptomes do not support widespread intron retention during spermatogenesis. The New Phytologist. PMID 36451524 DOI: 10.1111/nph.18652  0.392
2021 Sretenovic S, Yin D, Levav A, Selengut JD, Mount SM, Qi Y. Expanding plant genome-editing scope by an engineered iSpyMacCas9 system that targets A-rich PAM sequences. Plant Communications. 2: 100101. PMID 33898973 DOI: 10.1016/j.xplc.2020.100101  0.312
2021 Zhang Y, Ren Q, Tang X, Liu S, Malzahn AA, Zhou J, Wang J, Yin D, Pan C, Yuan M, Huang L, Yang H, Zhao Y, Fang Q, Zheng X, ... ... Mount SM, et al. Expanding the scope of plant genome engineering with Cas12a orthologs and highly multiplexable editing systems. Nature Communications. 12: 1944. PMID 33782402 DOI: 10.1038/s41467-021-22330-w  0.308
2019 Gunady MK, Mount SM, Corrada Bravo H. Yanagi: Fast and interpretable segment-based alternative splicing and gene expression analysis. Bmc Bioinformatics. 20: 421. PMID 31409274 DOI: 10.1186/S12859-019-2947-6  0.423
2019 Mount SM, Avsec Ž, Carmel L, Casadio R, Çelik MH, Chen K, Cheng J, Cohen NE, Fairbrother WG, Fenesh T, Gagneur J, Gotea V, Holzer T, Lin CF, Martelli PL, et al. Assessing predictions of the impact of variants on splicing in CAGI5. Human Mutation. PMID 31301154 DOI: 10.1002/Humu.23869  0.405
2018 Nazario-Toole AE, Robalino J, Okrah K, Corrada-Bravo H, Mount SM, Wu LP. The Splicing Factor Mediates the Cellular Immune Response in . Journal of Immunology (Baltimore, Md. : 1950). PMID 29997126 DOI: 10.4049/Jimmunol.1800496  0.3
2017 Zhang XN, Shi Y, Powers JJ, Gowda NB, Zhang C, Ibrahim HMM, Ball HB, Chen SL, Lu H, Mount SM. Transcriptome analyses reveal SR45 to be a neutral splicing regulator and a suppressor of innate immunity in Arabidopsis thaliana. Bmc Genomics. 18: 772. PMID 29020934 DOI: 10.1186/s12864-017-4183-7  0.372
2016 Buffalo V, Mount SM, Coop G. A Genealogical Look at Shared Ancestry on the X Chromosome. Genetics. PMID 27356612 DOI: 10.1534/Genetics.116.190041  0.314
2015 Mount SM, Wolin SL. Recognizing the 35th anniversary of the proposal that snRNPs are involved in splicing. Molecular Biology of the Cell. 26: 3557-60. PMID 26463979 DOI: 10.1091/Mbc.E14-10-1486  0.355
2015 Gibbons TR, Mount SM, Cooper ED, Delwiche CF. Erratum to: Evaluation of BLAST-based edge-weighting metrics used for homology inference with the Markov Clustering algorithm. Bmc Bioinformatics. 16: 274. PMID 26315999 DOI: 10.1186/S12859-015-0690-1  0.329
2015 Pal LR, Yu CH, Mount SM, Moult J. Insights from GWAS: emerging landscape of mechanisms underlying complex trait disease. Bmc Genomics. 16: S4. PMID 26110739 DOI: 10.1186/1471-2164-16-S8-S4  0.334
2014 Patro R, Mount SM, Kingsford C. Sailfish enables alignment-free isoform quantification from RNA-seq reads using lightweight algorithms. Nature Biotechnology. 32: 462-4. PMID 24752080 DOI: 10.1038/Nbt.2862  0.389
2010 Lin CF, Mount SM, Jarmo?owski A, Maka?owski W. Evolutionary dynamics of U12-type spliceosomal introns. Bmc Evolutionary Biology. 10: 47. PMID 20163699 DOI: 10.1186/1471-2148-10-47  0.331
2009 Zhang XN, Mount SM. Two alternatively spliced isoforms of the Arabidopsis SR45 protein have distinct roles during normal plant development. Plant Physiology. 150: 1450-8. PMID 19403727 DOI: 10.1104/pp.109.138180  0.32
2008 Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KL, Salzberg SL, Feng L, Jones MR, Skelton RL, Murray JE, ... ... Mount SM, et al. The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature. 452: 991-6. PMID 18432245 DOI: 10.1038/Nature06856  0.537
2007 Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, ... ... Mount SM, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18. PMID 17994087 DOI: 10.1038/Nature06341  0.713
2007 Dogan RI, Getoor L, Wilbur WJ, Mount SM. Features generated for computational splice-site prediction correspond to functional elements. Bmc Bioinformatics. 8: 410. PMID 17958908 DOI: 10.1186/1471-2105-8-410  0.336
2007 Pertea M, Mount SM, Salzberg SL. A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana. Bmc Bioinformatics. 8: 159. PMID 17517127 DOI: 10.1186/1471-2105-8-159  0.357
2007 Mount SM, Gotea V, Lin CF, Hernandez K, Makalowski W. Spliceosomal small nuclear RNA genes in 11 insect genomes. Rna (New York, N.Y.). 13: 5-14. PMID 17095541 DOI: 10.1261/rna.259207  0.585
2006 Campbell MA, Haas BJ, Hamilton JP, Mount SM, Buell CR. Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis. Bmc Genomics. 7: 327. PMID 17194304 DOI: 10.1186/1471-2164-7-327  0.495
2004 Roberts M, Hayes W, Hunt BR, Mount SM, Yorke JA. Reducing storage requirements for biological sequence comparison. Bioinformatics (Oxford, England). 20: 3363-9. PMID 15256412 DOI: 10.1093/Bioinformatics/Bth408  0.412
2003 Haas BJ, Delcher AL, Mount SM, Wortman JR, Smith RK, Hannick LI, Maiti R, Ronning CM, Rusch DB, Town CD, Salzberg SL, White O. Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies. Nucleic Acids Research. 31: 5654-66. PMID 14500829 DOI: 10.1093/Nar/Gkg770  0.542
2003 Nagengast AA, Stitzinger SM, Tseng CH, Mount SM, Salz HK. Sex-lethal splicing autoregulation in vivo: interactions between SEX-LETHAL, the U1 snRNP and U2AF underlie male exon skipping. Development (Cambridge, England). 130: 463-71. PMID 12490553 DOI: 10.1242/dev.00274  0.333
2002 Mount SM, Chang C. Evidence for a plastid origin of plant ethylene receptor genes. Plant Physiology. 130: 10-4. PMID 12226482 DOI: 10.1104/Pp.005397  0.364
2000 Mount SM. Genomic sequence, splicing, and gene annotation. American Journal of Human Genetics. 67: 788-92. PMID 10986039 DOI: 10.1086/303098  0.467
2000 Mount SM, Salz HK. Pre-messenger RNA processing factors in the Drosophila genome. The Journal of Cell Biology. 150: F37-44. PMID 10908584 DOI: 10.1083/Jcb.150.2.F37  0.41
2000 Adams MD, Celniker SE, Holt RA, Evans CA, Gocayne JD, Amanatides PG, Scherer SE, Li PW, Hoskins RA, Galle RF, George RA, Lewis SE, Richards S, Ashburner M, Henderson SN, ... ... Mount SM, et al. The genome sequence of Drosophila melanogaster. Science (New York, N.Y.). 287: 2185-95. PMID 10731132 DOI: 10.1126/Science.287.5461.2185  0.622
2000 Mount SM, Anderson P. Expanding the definition of informational suppression. Trends in Genetics : Tig. 16: 157. PMID 10729829 DOI: 10.1016/S0168-9525(99)01964-2  0.378
1999 Woodson SA, Mount SM. The RNA World, second edition, edited by Raymond F. Gesteland, Thomas R. Cech, and John F. Atkins. 1999. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press. Hardcover, 709 pp. $129. Rna. 5: 1133-1134. DOI: 10.1017/S1355838299001259  0.332
1997 Mount SM. Genetic depletion reveals an essential role for an SR protein splicing factor in vertebrate cells. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 19: 189-92. PMID 9080768 DOI: 10.1002/bies.950190302  0.351
1996 Peculis BA, Mount SM. Ribosomal RNA: small nucleolar RNAs make their mark. Current Biology : Cb. 6: 1413-5. PMID 8939586 DOI: 10.1016/S0960-9822(96)00745-2  0.343
1996 Mount SM. AT-AC introns: an ATtACk on dogma. Science (New York, N.Y.). 271: 1690-2. PMID 8596928 DOI: 10.1126/science.271.5256.1690  0.338
1995 Peng X, Mount SM. Genetic enhancement of RNA-processing defects by a dominant mutation in B52, the Drosophila gene for an SR protein splicing factor. Molecular and Cellular Biology. 15: 6273-82. PMID 7565780 DOI: 10.1128/Mcb.15.11.6273  0.38
1995 Guo M, Mount SM. Localization of sequences required for size-specific splicing of a small Drosophila intron in vitro. Journal of Molecular Biology. 253: 426-37. PMID 7473725 DOI: 10.1006/jmbi.1995.0564  0.444
1993 Guo M, Lo PC, Mount SM. Species-specific signals for the splicing of a short Drosophila intron in vitro. Molecular and Cellular Biology. 13: 1104-18. PMID 8423778 DOI: 10.1128/Mcb.13.2.1104  0.447
1992 Mount SM, Burks C, Hertz G, Stormo GD, White O, Fields C. Splicing signals in Drosophila: intron size, information content, and consensus sequences. Nucleic Acids Research. 20: 4255-62. PMID 1508718 DOI: 10.1093/nar/20.16.4255  0.428
1991 Kurkulos M, Weinberg JM, Pepling ME, Mount SM. Polyadenylylation in copia requires unusually distant upstream sequences. Proceedings of the National Academy of Sciences of the United States of America. 88: 3038-42. PMID 1849643 DOI: 10.1073/Pnas.88.8.3038  0.463
1990 Lo PC, Mount SM. Drosophila melanogaster genes for U1 snRNA variants and their expression during development. Nucleic Acids Research. 18: 6971-9. PMID 2124674 DOI: 10.1093/Nar/18.23.6971  0.487
1990 Pepling M, Mount SM. Sequence of a cDNA from the Drosophila melanogaster white gene. Nucleic Acids Research. 18: 1633. PMID 2109311 DOI: 10.1093/Nar/18.6.1633  0.47
1990 Mancebo R, Lo PC, Mount SM. Structure and expression of the Drosophila melanogaster gene for the U1 small nuclear ribonucleoprotein particle 70K protein. Molecular and Cellular Biology. 10: 2492-502. PMID 1692955 DOI: 10.1128/Mcb.10.6.2492  0.464
1988 Mount SM, Green MM, Rubin GM. Partial revertants of the transposable element-associated suppressible allele white-apricot in Drosophila melanogaster: structures and responsiveness to genetic modifiers. Genetics. 118: 221-34. PMID 2834265  0.447
1987 Mount SM. Sequence similarity. Nature. 325: 487. PMID 3100960 DOI: 10.1038/325487c0  0.361
1985 Mount SM, Rubin GM. Complete nucleotide sequence of the Drosophila transposable element copia: homology between copia and retroviral proteins. Molecular and Cellular Biology. 5: 1630-8. PMID 2410772 DOI: 10.1128/Mcb.5.7.1630  0.615
1983 Mount S, Steitz J. RNA processing: Lessons from mutant globins Nature. 303: 380-381. PMID 6855891 DOI: 10.1038/303380A0  0.322
1983 Mount SM. RNA processing. Sequences that signal where to splice. Nature. 304: 309-10. PMID 6348551 DOI: 10.1038/304309A0  0.432
1983 Steitz JA, Wolin SL, Rinke J, Pettersson I, Mount SM, Lerner EA, Hinterberger M, Gottlieb E. Small ribonucleoproteins from eukaryotes: structures and roles in RNA biogenesis. Cold Spring Harbor Symposia On Quantitative Biology. 47: 893-900. PMID 6222869 DOI: 10.1101/Sqb.1983.047.01.103  0.33
1983 Padgett RA, Mount SM, Steitz JA, Sharp PA. Splicing of messenger RNA precursors is inhibited by antisera to small nuclear ribonucleoprotein. Cell. 35: 101-7. PMID 6194895 DOI: 10.1016/0092-8674(83)90212-X  0.32
1983 Mount SM, Pettersson I, Hinterberger M, Karmas A, Steitz JA. The U1 small nuclear RNA-protein complex selectively binds a 5' splice site in vitro. Cell. 33: 509-18. PMID 6190573 DOI: 10.1016/0092-8674(83)90432-4  0.399
1983 Bernstein LB, Mount SM, Weiner AM. Pseudogenes for human small nuclear RNA U3 appear to arise by integration of self-primed reverse transcripts of the RNA into new chromosomal sites. Cell. 32: 461-72. PMID 6186397 DOI: 10.1016/0092-8674(83)90466-X  0.386
1982 Mount SM. A catalogue of splice junction sequences. Nucleic Acids Research. 10: 459-72. PMID 7063411 DOI: 10.1093/Nar/10.2.459  0.495
1981 Mount SM, Steitz JA. Sequence of U1 RNA from Drosophila melanogaster: implications for U1 secondary structure and possible involvement in splicing. Nucleic Acids Research. 9: 6351-68. PMID 6172778 DOI: 10.1093/Nar/9.23.6351  0.494
1981 Dingermann T, Sharp S, Appel B, DeFranco D, Mount S, Heiermann R, Pongs O, Söll D. Transcription of cloned tRNA and 5s RNA genes in a Drosophila cell free extract Nucleic Acids Research. 9: 3907-3918. PMID 6170932 DOI: 10.1093/Nar/9.16.3907  0.379
1980 Lerner MR, Boyle JA, Mount SM, Wolin SL, Steitz JA. Are snRNPs involved in splicing? Nature. 283: 220-4. PMID 7350545 DOI: 10.1038/283220A0  0.351
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