Kristin M. Kohler, Ph.D. - Related publications

Affiliations: 
2011 Yale University, New Haven, CT 
Area:
immunology
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Khayat M, Deri S, Wolf D, Trigano T, Medalia O, Ben-Harush K. Biomimetic nuclear lamin fibers with remarkable toughness and stiffness. International Journal of Biological Macromolecules. PMID 32961198 DOI: 10.1016/j.ijbiomac.2020.09.113   
2020 Cohen M, Pignatti E, Dines M, Mory A, Ekhilevitch N, Kolodny R, Flück CE, Tiosano D. In Silico Structural and Biochemical Functional Analysis of a Novel Pathogenic Variant. International Journal of Molecular Sciences. 21. PMID 32824094 DOI: 10.3390/ijms21165857   
2020 Jaleel Z, Zhou S, Martín-Moldes Z, Baugh LM, Yeh J, Dinjaski N, Brown LT, Garb JE, Kaplan DL. Expanding Canonical Spider Silk Properties through a DNA Combinatorial Approach. Materials (Basel, Switzerland). 13. PMID 32823912 DOI: 10.3390/ma13163596   
2020 Vitorino R, Guedes S, Trindade F, Correia I, Moura G, Carvalho P, Santos M, Amado F. sequencing of proteins by mass spectrometry. Expert Review of Proteomics. PMID 33016158 DOI: 10.1080/14789450.2020.1831387   
2020 McGauran G, Dorris E, Borza R, Morgan N, Shields DC, Matallanas D, Wilson AG, O'Connell DJ. Resolving the Interactome of the Human Immune Regulator MACIR with Enhanced Membrane Protein Preparation and Affinity Proteomics. Proteomics. e2000062. PMID 32864787 DOI: 10.1002/pmic.202000062   
2020 Dass R, Mulder FAA, Nielsen JT. ODiNPred: comprehensive prediction of protein order and disorder. Scientific Reports. 10: 14780. PMID 32901090 DOI: 10.1038/s41598-020-71716-1   
2020 Nash MA. Single-molecule and Single-cell Approaches in Molecular Bioengineering. Chimia. 74: 704-709. PMID 32958108 DOI: 10.2533/chimia.2020.704   
2020 Jayathirtha M, Dupree EJ, Manzoor Z, Larose B, Sechrist Z, Neagu AN, Petre BA, Darie CC. Mass Spectrometric (MS) Analysis of Proteins and Peptides. Current Protein & Peptide Science. PMID 32713333 DOI: 10.2174/1389203721666200726223336   
2020 Haghroosta A, Goudarzi H, Faghihloo E, Ghalavand Z, Ranjbar MM, Langroudi RP. In silico analysis of a chimeric fusion protein as a new vaccine candidate against type A and alpha toxins. Comparative Clinical Pathology. 1-9. PMID 32837501 DOI: 10.1007/s00580-020-03136-6   
2020 Parida S, Mohapatra A, Das S, Kumar Sahoo P. Cloning and characterization of linker histone H1 gene in rohu, . Animal Biotechnology. 1-12. PMID 33063599 DOI: 10.1080/10495398.2020.1832506   
2020 Deveshwar P, Sharma S, Prusty A, Sinha N, Zargar SM, Karwal D, Parashar V, Singh S, Tyagi AK. Analysis of rice nuclear-localized seed-expressed proteins and their database (RSNP-DB). Scientific Reports. 10: 15116. PMID 32934280 DOI: 10.1038/s41598-020-70713-8   
2020 Samodova D, Hosfield CM, Cramer CN, Giuli MV, Cappellini E, Franciosa G, Rosenblatt M, Kelstrup CD, Olsen JV. ProAlanase is an effective alternative to trypsin for proteomics applications and disulfide bond mapping. Molecular & Cellular Proteomics : McP. PMID 33020190 DOI: 10.1074/mcp.TIR120.002129   
2020 Curnow P, Hardy BJ, Dufour V, Arthur CJ, Stenner R, Hodgson LR, Verkade P, Williams C, Shoemark DK, Sessions RB, Crump MP, Jones MR, Anderson JLR. Small-residue packing motifs modulate the structure and function of a minimal de novo membrane protein. Scientific Reports. 10: 15203. PMID 32938984 DOI: 10.1038/s41598-020-71585-8   
2020 Liu J, Cheng R, Van Eps N, Wang N, Morizumi T, Ou WL, Klauser P, Rozovsky S, Ernst OP, Wang L. Genetically Encoded Quinone Methides Enabling Rapid, Site-specific, and Photo-controlled Protein Modification with Amine Reagents. Journal of the American Chemical Society. PMID 32915556 DOI: 10.1021/jacs.0c06820   
2020 Chowdhury R, Grisewood MJ, Boorla VS, Yan Q, Pfleger BF, Maranas CD. IPRO+/-: Computational Protein Design Tool Allowing for Insertions and Deletions. Structure (London, England : 1993). PMID 32857964 DOI: 10.1016/j.str.2020.08.003   
2020 Joshi AG, Harini K, Meenakshi I, Shafi KM, Pasha SN, Mahita J, Sajeevan RS, Karpe SD, Ghosh P, Nitish S, Gandhimathi A, Mathew OK, Prasanna SH, Malini M, Mutt E, et al. A knowledge-driven protocol for prediction of proteins of interest with an emphasis on biosynthetic pathways. Methodsx. 7: 101053. PMID 33024710 DOI: 10.1016/j.mex.2020.101053   
2020 Rogals MJ, Yang JY, Williams RV, Moremen KW, Amster IJ, Prestegard JH. Sparse isotope labeling for nuclear magnetic resonance (NMR) of glycoproteins using 13C-glucose. Glycobiology. PMID 32902634 DOI: 10.1093/glycob/cwaa071   
2020 Kumar G, Srinivasan N, Sandhya S. Artificial protein sequences enable recognition of vicinal and distant protein functional relationships. Proteins. PMID 32725917 DOI: 10.1002/prot.25986   
2020 Hussain M, Jabeen N, Shabbir S, Udin N, Aziz B, Amanullah A, Raza F, Baig AA. Dataset for homologous proteins in for SARS-CoV-2/human interactome. Data in Brief. 32: 106082. PMID 32775582 DOI: 10.1016/j.dib.2020.106082   
2020 Lipsh-Sokolik R, Listov D, Fleishman SJ. The AbDesign computational pipeline for modular backbone assembly and design of binders and enzymes. Protein Science : a Publication of the Protein Society. PMID 33040418 DOI: 10.1002/pro.3970   
2020 Flores DR, Casados LE, Velasco SF, Ramírez AC, Velázquez G. Comparative study of composition, antioxidant and antimicrobial activity of two adult edible insects from Tenebrionidae family. Bmc Chemistry. 14: 55. PMID 32944716 DOI: 10.1186/s13065-020-00707-0   
2020 Giri SJ, Dutta P, Halani P, Saha S. MultiPredGO: Deep Multi-Modal Protein Function Prediction by Amalgamating Protein Structure, Sequence, and Interaction. Ieee Journal of Biomedical and Health Informatics. PMID 32897865 DOI: 10.1109/JBHI.2020.3022806   
2020 Banyuls N, Quan Y, González-Martínez RM, Hernández-Martínez P, Ferré J. Effect of substitutions of key residues on the stability and the insecticidal activity of Vip3Af from Bacillus thuringiensis. Journal of Invertebrate Pathology. 107439. PMID 32663546 DOI: 10.1016/j.jip.2020.107439   
2020 Banyuls N, Quan Y, González-Martínez RM, Hernández-Martínez P, Ferré J. Effect of substitutions of key residues on the stability and the insecticidal activity of Vip3Af from Bacillus thuringiensis. Journal of Invertebrate Pathology. 107439. PMID 32663546 DOI: 10.1016/j.jip.2020.107439   
2020 Wang B, Hao J, Pan N, Wang Z, Chen Y, Wan C. Identification and analysis of small proteins and short open reading frame encoded peptides in Hep3B cell. Journal of Proteomics. 103965. PMID 32891891 DOI: 10.1016/j.jprot.2020.103965   
2020 Ferdous N, Reza MN, Emon MTH, Islam MS, Mohiuddin AKM, Hossain MU. Molecular characterization and functional annotation of a hypothetical protein (SCO0618) of Streptomyces coelicolor A3(2). Genomics & Informatics. 18: e28. PMID 33017872 DOI: 10.5808/GI.2020.18.3.e28   
2020 Ferdous N, Reza MN, Emon MTH, Islam MS, Mohiuddin AKM, Hossain MU. Molecular characterization and functional annotation of a hypothetical protein (SCO0618) of Streptomyces coelicolor A3(2). Genomics & Informatics. 18: e28. PMID 33017872 DOI: 10.5808/GI.2020.18.3.e28   
2020 Avelar GST, Gonçalves LO, Guimarães FG, Guimarães PAS, do Nascimento Rocha LG, Carvalho MGR, de Melo Resende D, Ruiz JC. Diversity and genome mapping assessment of disordered and functional domains in trypanosomatids. Journal of Proteomics. 227: 103919. PMID 32721629 DOI: 10.1016/j.jprot.2020.103919   
2020 Ren H. Genetically encoded selective cross-linkers and emerging applications. Biochemical Society Transactions. 48: 1807-1817. PMID 32657352 DOI: 10.1042/BST20200508   
2020 Lyu X, Liu Y. Nonoptimal Codon Usage Is Critical for Protein Structure and Function of the Master General Amino Acid Control Regulator CPC-1. Mbio. 11. PMID 33051373 DOI: 10.1128/mBio.02605-20   
2020 Deighan WI, Winton VJ, Melani RD, Anderson LC, McGee JP, Schachner LF, Barnidge D, Murray D, Alexander HD, Gibson DS, Deery MJ, McNicholl FP, McLaughlin J, Kelleher NL, Thomas PM. Development of novel methods for non-canonical myeloma protein analysis with an innovative adaptation of immunofixation electrophoresis, native top-down mass spectrometry, and middle-down de novo sequencing. Clinical Chemistry and Laboratory Medicine. PMID 33079696 DOI: 10.1515/cclm-2020-1072   
2020 Jiang L, Wang M, Lin S, Jian R, Li X, Chan J, Dong G, Fang H, Robinson AE, , Snyder MP. A Quantitative Proteome Map of the Human Body. Cell. PMID 32916130 DOI: 10.1016/j.cell.2020.08.036   
2020 Mirela-Bota P, Aguirre-Plans J, Meseguer A, Galletti C, Segura J, Planas-Iglesias J, Garcia-Garcia J, Guney E, Oliva B, Fernandez-Fuentes N. Galaxy InteractoMIX: An Integrated Computational Platform for the Study of Protein-Protein Interaction Data. Journal of Molecular Biology. PMID 32976910 DOI: 10.1016/j.jmb.2020.09.015   
2020 Zhang X, Liu X, Li F, Yue X. The Differential Composition of Whey Proteomes in Hu Sheep Colostrum and Milk during Different Lactation Periods. Animals : An Open Access Journal From Mdpi. 10. PMID 33019658 DOI: 10.3390/ani10101784   
2020 Hassan SS, Choudhury PP, Roy B. Molecular phylogeny and missense mutations of envelope proteins across coronaviruses. Genomics. PMID 32927009 DOI: 10.1016/j.ygeno.2020.09.014   
2020 Strokach A, Becerra D, Corbi-Verge C, Perez-Riba A, Kim PM. Fast and Flexible Protein Design Using Deep Graph Neural Networks. Cell Systems. PMID 32971019 DOI: 10.1016/j.cels.2020.08.016   
2020 Strokach A, Becerra D, Corbi-Verge C, Perez-Riba A, Kim PM. Fast and Flexible Protein Design Using Deep Graph Neural Networks. Cell Systems. PMID 32971019 DOI: 10.1016/j.cels.2020.08.016   
2020 Chen CH, Chen YC, Huang CH, Wang SH, Lin JS, Lo SC, Huang CC. Exploring Potential Proteomic Biomarkers for Prognosis of Infective Endocarditis through Profiled Autoantibodies by an Immunomics Protein Array Technique. The Heart Surgery Forum. 23: E555-E573. PMID 32990583 DOI: 10.1532/hsf.3017   
2020 Bosch JA, Chen CL, Perrimon N. Proximity-dependent labeling methods for proteomic profiling in living cells: An update. Wiley Interdisciplinary Reviews. Developmental Biology. e392. PMID 32909689 DOI: 10.1002/wdev.392   
2020 Pal S, Sengupta K. Computational-based insights into the phylogeny, structure, and function of alkane-1-monooxygenase. 3 Biotech. 10: 391. PMID 32832341 DOI: 10.1007/s13205-020-02388-x   
2020 Abraham-Juarez MJ, Schrager-Lavelle A, Man J, Whipple C, Handakumbura P, Babbitt C, Bartlett M. Evolutionary Variation in MADS-box Dimerization Affects Floral Development and Protein Abundance in Maize. The Plant Cell. PMID 32873631 DOI: 10.1105/tpc.20.00300   
2020 Will JM, Erbacher C, Sperling M, Karst U. A mass spectrometry-based approach gives new insight into organotin-protein interactions. Metallomics : Integrated Biometal Science. PMID 32930317 DOI: 10.1039/d0mt00171f   
2020 Chen N, Das M, LiWang A, Wang LP. Sequence-Based Prediction of Metamorphic Behavior in Proteins. Biophysical Journal. PMID 32937108 DOI: 10.1016/j.bpj.2020.07.034   
2020 López-Laguna H, Sánchez J, Unzueta U, Mangues R, Vázquez E, Villaverde A. Divalent Cations: A Molecular Glue for Protein Materials. Trends in Biochemical Sciences. PMID 32891514 DOI: 10.1016/j.tibs.2020.08.003   
2020 Shah A, Rashid F, Aziz A, Jan AU, Suleman M. Genetic characterization of structural and open reading Fram-8 proteins of SARS-CoV-2 isolates from different countries. Gene Reports. 21: 100886. PMID 32954047 DOI: 10.1016/j.genrep.2020.100886   
2020 Akhand MRN, Azim KF, Hoque SF, Moli MA, Joy BD, Akter H, Afif IK, Ahmed N, Hasan M. Genome based evolutionary lineage of SARS-CoV-2 towards the development of novel chimeric vaccine. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 85: 104517. PMID 32882432 DOI: 10.1016/j.meegid.2020.104517   
2020 Katali O, Shipingana L, Nyarangó P, Pääkkönen M, Haindongo E, Rennie T, James P, Eriksson J, Hunter CJ. Protein Identification of Venoms of the African Spitting Cobras, and . Toxins. 12. PMID 32823821 DOI: 10.3390/toxins12080520   
2020 Presslee S, Penkman K, Fischer R, Richards-Slidel E, Southon J, Hospitaleche CA, Collins M, MacPhee R. Assessment of different screening methods for selecting palaeontological bone samples for peptide sequencing. Journal of Proteomics. 103986. PMID 32941991 DOI: 10.1016/j.jprot.2020.103986   
2020 Mu L, Yin X, Wu H, Han K, Guo Z, Ye J. MAp34 Regulates the Non-specific Cell Immunity of Monocytes/Macrophages and Inhibits the Lectin Pathway of Complement Activation in a Teleost Fish. Frontiers in Immunology. 11: 1706. PMID 32903484 DOI: 10.3389/fimmu.2020.01706   
2020 Li J, Gao M, Gabriel DW, Liang W, Song L. Secretome-Wide Analysis of Lysine Acetylation in f. sp. Provides Novel Insights Into Infection-Related Proteins. Frontiers in Microbiology. 11: 559440. PMID 33013791 DOI: 10.3389/fmicb.2020.559440