| Year |
Citation |
Score |
| 2023 |
Connors BM, Thompson J, Ertmer S, Clark RL, Pfleger BF, Venturelli OS. Control points for design of taxonomic composition in synthetic human gut communities. Cell Systems. PMID 38091992 DOI: 10.1016/j.cels.2023.11.007 |
0.345 |
|
| 2023 |
Ostrem Loss E, Thompson J, Cheung PLK, Qian Y, Venturelli OS. Carbohydrate complexity limits microbial growth and reduces the sensitivity of human gut communities to perturbations. Nature Ecology & Evolution. 7: 127-142. PMID 36604549 DOI: 10.1038/s41559-022-01930-9 |
0.313 |
|
| 2022 |
Baranwal M, Clark RL, Thompson J, Sun Z, Hero AO, Venturelli OS. Recurrent neural networks enable design of multifunctional synthetic human gut microbiome dynamics. Elife. 11. PMID 35736613 DOI: 10.7554/eLife.73870 |
0.331 |
|
| 2022 |
Feng J, Qian Y, Zhou Z, Ertmer S, Vivas EI, Lan F, Hamilton JJ, Rey FE, Anantharaman K, Venturelli OS. Polysaccharide utilization loci in Bacteroides determine population fitness and community-level interactions. Cell Host & Microbe. PMID 34995484 DOI: 10.1016/j.chom.2021.12.006 |
0.35 |
|
| 2021 |
Qian Y, Lan F, Venturelli OS. Towards a deeper understanding of microbial communities: integrating experimental data with dynamic models. Current Opinion in Microbiology. 62: 84-92. PMID 34098512 DOI: 10.1016/j.mib.2021.05.003 |
0.335 |
|
| 2020 |
Gupta S, Ross TD, Gomez MM, Grant JL, Romero PA, Venturelli OS. Investigating the dynamics of microbial consortia in spatially structured environments. Nature Communications. 11: 2418. PMID 32415107 DOI: 10.1038/S41467-020-16200-0 |
0.504 |
|
| 2019 |
Hsu RH, Clark RL, Tan JW, Ahn JC, Gupta S, Romero PA, Venturelli OS. Microbial Interaction Network Inference in Microfluidic Droplets. Cell Systems. PMID 31494089 DOI: 10.1016/J.Cels.2019.06.008 |
0.418 |
|
| 2019 |
Zengler K, Hofmockel K, Baliga NS, Behie SW, Bernstein HC, Brown JB, Dinneny JR, Floge SA, Forry SP, Hess M, Jackson SA, Jansson C, Lindemann SR, Pett-Ridge J, Maranas C, ... Venturelli OS, et al. EcoFABs: advancing microbiome science through standardized fabricated ecosystems. Nature Methods. PMID 31227812 DOI: 10.1038/S41592-019-0465-0 |
0.347 |
|
| 2018 |
Cao X, Hamilton JJ, Venturelli OS. Understanding and Engineering Distributed Biochemical Pathways in Microbial Communities. Biochemistry. PMID 30457843 DOI: 10.1021/Acs.Biochem.8B01006 |
0.442 |
|
| 2018 |
Venturelli OS, Carr AC, Fisher G, Hsu RH, Lau R, Bowen BP, Hromada S, Northen T, Arkin AP. Deciphering microbial interactions in synthetic human gut microbiome communities. Molecular Systems Biology. 14: e8157. PMID 29930200 DOI: 10.15252/Msb.20178157 |
0.423 |
|
| 2017 |
Venturelli OS, Tei M, Bauer S, Chan LJG, Petzold CJ, Arkin AP. Programming mRNA decay to modulate synthetic circuit resource allocation. Nature Communications. 8: 15128. PMID 28443619 DOI: 10.1038/Ncomms15128 |
0.338 |
|
| 2015 |
Venturelli OS, Egbert RG, Arkin AP. Towards engineering biological systems in a broader context. Journal of Molecular Biology. PMID 26546279 DOI: 10.1016/J.Jmb.2015.10.025 |
0.379 |
|
| 2015 |
Chevalier M, Venturelli O, El-Samad H. The Impact of Different Sources of Fluctuations on Mutual Information in Biochemical Networks. Plos Computational Biology. 11: e1004462. PMID 26484538 DOI: 10.1371/Journal.Pcbi.1004462 |
0.327 |
|
| 2015 |
Venturelli OS, Zuleta I, Murray RM, El-Samad H. Population diversification in a yeast metabolic program promotes anticipation of environmental shifts. Plos Biology. 13: e1002042. PMID 25626086 DOI: 10.1371/Journal.Pbio.1002042 |
0.418 |
|
| 2012 |
Venturelli OS, El-Samad H, Murray RM. Synergistic dual positive feedback loops established by molecular sequestration generate robust bimodal response. Proceedings of the National Academy of Sciences of the United States of America. 109: E3324-33. PMID 23150580 DOI: 10.1073/Pnas.1211902109 |
0.462 |
|
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