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Etienne Caron, Ph.D. - Publications

Affiliations: 
2011 Université de Montréal, Montréal, Canada 
Area:
Mass spectrometry
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23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Huang X, Gan Z, Cui H, Lan T, Liu Y, Caron E, Shao W. The SysteMHC Atlas v2.0, an updated resource for mass spectrometry-based immunopeptidomics. Nucleic Acids Research. PMID 38000392 DOI: 10.1093/nar/gkad1068  0.383
2023 Stutzmann C, Peng J, Wu Z, Savoie C, Sirois I, Thibault P, Wheeler AR, Caron E. Unlocking the potential of microfluidics in mass spectrometry-based immunopeptidomics for tumor antigen discovery. Cell Reports Methods. 3: 100511. PMID 37426761 DOI: 10.1016/j.crmeth.2023.100511  0.512
2022 Kovalchik K, Hamelin D, Caron E. Generation of HLA Allele-Specific Spectral Libraries to Identify and Quantify Immunopeptidomes by SWATH/DIA-MS. Methods in Molecular Biology (Clifton, N.J.). 2420: 137-147. PMID 34905171 DOI: 10.1007/978-1-0716-1936-0_11  0.416
2021 Kovalchik KA, Ma Q, Wessling L, Saab F, Despault J, Kubiniok P, Hamelin DJ, Faridi P, Li C, Purcell AW, Jang A, Paramithiotis E, Tognetti M, Reiter L, Bruderer R, ... ... Caron E, et al. MhcVizPipe: A Quality Control Software for Rapid Assessment of Small- to Large-Scale Immunopeptidome Data Sets. Molecular & Cellular Proteomics : McP. 100178. PMID 34798331 DOI: 10.1016/j.mcpro.2021.100178  0.673
2021 Saab F, Hamelin DJ, Ma Q, Kovalchik KA, Sirois I, Faridi P, Li C, Purcell AW, Kubiniok P, Caron E. RHybridFinder: An R package to process immunopeptidomic data for putative hybrid peptide discovery. Star Protocols. 2: 100875. PMID 34746858 DOI: 10.1016/j.xpro.2021.100875  0.388
2021 Sirois I, Isabelle M, Duquette JD, Saab F, Caron E. Immunopeptidomics: Isolation of Mouse and Human MHC Class I- and II-Associated Peptides for Mass Spectrometry Analysis. Journal of Visualized Experiments : Jove. PMID 34723952 DOI: 10.3791/63052  0.432
2020 Shao W, Caron E, Pedrioli P, Aebersold R. The SysteMHC Atlas: a Computational Pipeline, a Website, and a Data Repository for Immunopeptidomic Analyses. Methods in Molecular Biology (Clifton, N.J.). 2120: 173-181. PMID 32124319 DOI: 10.1007/978-1-0716-0327-7_12  0.33
2019 Vizcaíno JA, Kubiniok P, Kovalchik K, Ma Q, Duquette JD, Mongrain I, Deutsch EW, Peters B, Sette A, Sirois I, Caron E. The Human Immunopeptidome Project: a roadmap to predict and treat immune diseases. Molecular & Cellular Proteomics : McP. PMID 31744855 DOI: 10.1074/Mcp.R119.001743  0.393
2018 Schuster H, Shao W, Weiss T, Pedrioli PGA, Roth P, Weller M, Campbell DS, Deutsch EW, Moritz RL, Planz O, Rammensee HG, Aebersold R, Caron E. A tissue-based draft map of the murine MHC class I immunopeptidome. Scientific Data. 5: 180157. PMID 30084848 DOI: 10.1038/Sdata.2018.157  0.484
2017 Shao W, Pedrioli PGA, Wolski W, Scurtescu C, Schmid E, Vizcaíno JA, Courcelles M, Schuster H, Kowalewski D, Marino F, Arlehamn CSL, Vaughan K, Peters B, Sette A, Ottenhoff THM, ... ... Caron E, et al. The SysteMHC Atlas project. Nucleic Acids Research. PMID 28985418 DOI: 10.1093/Nar/Gkx664  0.7
2017 Caron E, Aebersold R, Banaei-Esfahani A, Chong C, Bassani-Sternberg M. A Case for a Human Immuno-Peptidome Project Consortium. Immunity. 47: 203-208. PMID 28813649 DOI: 10.1016/J.Immuni.2017.07.010  0.349
2017 Vaughan K, Xu X, Caron E, Peters B, Sette A. Deciphering the MHC-associated peptidome: a review of naturally processed ligand data. Expert Review of Proteomics. PMID 28756714 DOI: 10.1080/14789450.2017.1361825  0.393
2017 Caron E, Roncagalli R, Hase T, Wolski WE, Choi M, Menoita MG, Durand S, García-Blesa A, Fierro-Monti I, Sajic T, Heusel M, Weiss T, Malissen M, Schlapbach R, Collins BC, et al. Precise Temporal Profiling of Signaling Complexes in Primary Cells Using SWATH Mass Spectrometry. Cell Reports. 18: 3219-3226. PMID 28355572 DOI: 10.1016/J.Celrep.2017.03.019  0.308
2016 Faridi P, Aebersold R, Caron E. A first dataset toward a standardized community-driven global mapping of the human immunopeptidome. Data in Brief. 7: 201-5. PMID 26958639 DOI: 10.1016/J.Dib.2016.02.016  0.492
2015 Caron E, Kowalewski DJ, Chiek Koh C, Sturm T, Schuster H, Aebersold R. Analysis of Major Histocompatibility Complex (MHC) Immunopeptidomes Using Mass Spectrometry. Molecular & Cellular Proteomics : McP. 14: 3105-17. PMID 26628741 DOI: 10.1074/Mcp.O115.052431  0.478
2014 Rosenberger G, Koh CC, Guo T, Röst HL, Kouvonen P, Collins BC, Heusel M, Liu Y, Caron E, Vichalkovski A, Faini M, Schubert OT, Faridi P, Ebhardt HA, Matondo M, et al. A repository of assays to quantify 10,000 human proteins by SWATH-MS. Scientific Data. 1: 140031. PMID 25977788 DOI: 10.1038/Sdata.2014.31  0.351
2011 Caron E, Vincent K, Fortier MH, Laverdure JP, Bramoullé A, Hardy MP, Voisin G, Roux PP, Lemieux S, Thibault P, Perreault C. The MHC I immunopeptidome conveys to the cell surface an integrative view of cellular regulation. Molecular Systems Biology. 7: 533. PMID 21952136 DOI: 10.1038/Msb.2011.68  0.547
2010 de Verteuil D, Muratore-Schroeder TL, Granados DP, Fortier MH, Hardy MP, Bramoullé A, Caron E, Vincent K, Mader S, Lemieux S, Thibault P, Perreault C. Deletion of immunoproteasome subunits imprints on the transcriptome and has a broad impact on peptides presented by major histocompatibility complex I molecules. Molecular & Cellular Proteomics : McP. 9: 2034-47. PMID 20484733 DOI: 10.1074/Mcp.M900566-Mcp200  0.577
2009 Granados DP, Tanguay PL, Hardy MP, Caron E, de Verteuil D, Meloche S, Perreault C. ER stress affects processing of MHC class I-associated peptides. Bmc Immunology. 10: 10. PMID 19220912 DOI: 10.1186/1471-2172-10-10  0.434
2008 Fortier MH, Caron E, Hardy MP, Voisin G, Lemieux S, Perreault C, Thibault P. The MHC class I peptide repertoire is molded by the transcriptome. The Journal of Experimental Medicine. 205: 595-610. PMID 18299400 DOI: 10.1084/Jem.20071985  0.611
2007 Fortier M, Caron E, De Verteuil D, Perreault C, Thibault P. Influence of mTOR Signalling Pathway on the MHC I Immunopeptidome. Blood. 110: 3887-3887. DOI: 10.1182/Blood.V110.11.3887.3887  0.615
2007 Fortier M, Caron E, Hardy M, Voisin G, Lemieux S, Perreault C, Thibault P. The MHC I Immunopeptidome Is Moulded by the Transcriptome and Conceals a Tissue-Specific Signature. Blood. 110: 1327-1327. DOI: 10.1182/Blood.V110.11.1327.1327  0.61
2005 Caron E, Charbonneau R, Huppé G, Brochu S, Perreault C. The structure and location of SIMP/STT3B account for its prominent imprint on the MHC I immunopeptidome. International Immunology. 17: 1583-96. PMID 16263756 DOI: 10.1093/Intimm/Dxh336  0.456
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