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Chunming Ding, Ph.D. - Publications

Affiliations: 
2003 Boston University, Boston, MA, United States 
Area:
Human genome analysis; molecular genetics; new biophysical tools and methodologies; genetic engineering
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33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Jin S, Zhu D, Shao F, Chen S, Guo Y, Li K, Wang Y, Ding R, Gao L, Ma W, Lu T, Li D, Zhang Z, Cai S, Liang X, ... ... Ding C, et al. Efficient detection and post-surgical monitoring of colon cancer with a multi-marker DNA methylation liquid biopsy. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33495330 DOI: 10.1073/pnas.2017421118  0.465
2014 Jin S, Lim YC, Ng DP, Law HY, Kwek KY, Yeo GS, Ding C. Accurate fetal chromosome dosage determination by shotgun sequencing of maternal plasma DNA without PCR amplification during library preparation. Clinical Chemistry. 60: 690-2. PMID 24491273 DOI: 10.1373/Clinchem.2013.216838  0.39
2014 Lee YK, Jin S, Duan S, Lim YC, Ng DP, Lin XM, Yeo GSh, Ding C. Improved reduced representation bisulfite sequencing for epigenomic profiling of clinical samples. Biological Procedures Online. 16: 1. PMID 24406024 DOI: 10.1186/1480-9222-16-1  0.371
2013 Das R, Lee YK, Strogantsev R, Jin S, Lim YC, Ng PY, Lin XM, Chng K, Yeo GSh, Ferguson-Smith AC, Ding C. DNMT1 and AIM1 Imprinting in human placenta revealed through a genome-wide screen for allele-specific DNA methylation. Bmc Genomics. 14: 685. PMID 24094292 DOI: 10.1186/1471-2164-14-685  0.348
2013 Jin S, Lee YK, Lim YC, Zheng Z, Lin XM, Ng DP, Holbrook JD, Law HY, Kwek KY, Yeo GS, Ding C. Global DNA hypermethylation in down syndrome placenta. Plos Genetics. 9: e1003515. PMID 23754950 DOI: 10.1371/Journal.Pgen.1003515  0.356
2012 Jin S, Lin XM, Law H, Kwek KY, Yeo GS, Ding C. Further improvement in quantifying male fetal DNA in maternal plasma. Clinical Chemistry. 58: 465-8. PMID 22100805 DOI: 10.1373/Clinchem.2011.174417  0.345
2010 Tong YK, Jin S, Chiu RW, Ding C, Chan KC, Leung TY, Yu L, Lau TK, Lo YM. Noninvasive prenatal detection of trisomy 21 by an epigenetic-genetic chromosome-dosage approach. Clinical Chemistry. 56: 90-8. PMID 19850629 DOI: 10.1373/Clinchem.2009.134114  0.34
2009 Luan J, Yuan J, Li X, Jin S, Yu L, Liao M, Zhang H, Xu C, He Q, Wen B, Zhong X, Chen X, Chan HL, Sung JJ, Zhou B, ... Ding C, et al. Multiplex detection of 60 hepatitis B virus variants by maldi-tof mass spectrometry. Clinical Chemistry. 55: 1503-9. PMID 19541863 DOI: 10.1373/Clinchem.2009.124859  0.343
2009 Heung MM, Jin S, Tsui NB, Ding C, Leung TY, Lau TK, Chiu RW, Lo YM. Placenta-derived fetal specific mRNA is more readily detectable in maternal plasma than in whole blood. Plos One. 4: e5858. PMID 19516908 DOI: 10.1371/Journal.Pone.0005858  0.316
2008 Zhou Bp, Zhang Hm, Li Xh, Yuan J, Li W, Xu Lm, Wang Hs, Chen Xc, Ding Cm. High throughput detection of drug-resistance gene mutations in HBV using MALDI-TOF mass spectrometry Zhonghua Shi Yan He Lin Chuang Bing Du Xue Za Zhi = Zhonghua Shiyan He Linchuang Bingduxue Zazhi = Chinese Journal of Experimental and Clinical Virology. 22: 351-353. PMID 19469172 DOI: 10.3760/Cma.J.Issn.1003-9279.2008.05.011  0.359
2008 Ding C. Maldi-TOF mass spectrometry for analyzing cell-free fetal DNA in maternal plasma. Methods in Molecular Biology (Clifton, N.J.). 444: 253-67. PMID 18425487 DOI: 10.1007/978-1-59745-066-9_20  0.322
2008 Chim SS, Jin S, Lee TY, Lun FM, Lee WS, Chan LY, Jin Y, Yang N, Tong YK, Leung TY, Lau TK, Ding C, Chiu RW, Lo YM. Systematic search for placental DNA-methylation markers on chromosome 21: toward a maternal plasma-based epigenetic test for fetal trisomy 21. Clinical Chemistry. 54: 500-11. PMID 18202156 DOI: 10.1373/Clinchem.2007.098731  0.365
2007 Tong YK, Chiu RW, Leung TY, Ding C, Lau TK, Leung TN, Lo YM. Detection of restriction enzyme-digested target DNA by PCR amplification using a stem-loop primer: application to the detection of hypomethylated fetal DNA in maternal plasma. Clinical Chemistry. 53: 1906-14. PMID 17901110 DOI: 10.1373/Clinchem.2007.092619  0.389
2007 Lo YM, Tsui NB, Chiu RW, Lau TK, Leung TN, Heung MM, Gerovassili A, Jin Y, Nicolaides KH, Cantor CR, Ding C. Plasma placental RNA allelic ratio permits noninvasive prenatal chromosomal aneuploidy detection. Nature Medicine. 13: 218-23. PMID 17206148 DOI: 10.1038/Nm1530  0.522
2007 Chow KC, Chiu RW, Tsui NB, Ding C, Lau TK, Leung TN, Lo YM. Mass spectrometric detection of an SNP panel as an internal positive control for fetal DNA analysis in maternal plasma. Clinical Chemistry. 53: 141-2. PMID 17202498 DOI: 10.1373/Clinchem.2007.079335  0.411
2007 Tsui NBY, Chiu RWK, Ding C, Lo YMD. Detection of placental RNA allelic ratio in maternal plasma by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry Nature Protocols. DOI: 10.1038/Nprot.2007.82  0.361
2006 Ding C, Lo YM. MALDI-TOF mass spectrometry for quantitative, specific, and sensitive analysis of DNA and RNA. Annals of the New York Academy of Sciences. 1075: 282-7. PMID 17108222 DOI: 10.1196/Annals.1368.038  0.371
2006 Chan KC, Ding C, Gerovassili A, Yeung SW, Chiu RW, Leung TN, Lau TK, Chim SS, Chung GT, Nicolaides KH, Lo YM. Hypermethylated RASSF1A in maternal plasma: A universal fetal DNA marker that improves the reliability of noninvasive prenatal diagnosis. Clinical Chemistry. 52: 2211-8. PMID 17068167 DOI: 10.1373/Clinchem.2006.074997  0.385
2006 Tong YK, Ding C, Chiu RW, Gerovassili A, Chim SS, Leung TY, Leung TN, Lau TK, Nicolaides KH, Lo YM. Noninvasive prenatal detection of fetal trisomy 18 by epigenetic allelic ratio analysis in maternal plasma: Theoretical and empirical considerations. Clinical Chemistry. 52: 2194-202. PMID 17040955 DOI: 10.1373/Clinchem.2006.076851  0.397
2006 Ding C. Qualitative and quantitative DNA and RNA analysis by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Methods in Molecular Biology (Clifton, N.J.). 336: 59-71. PMID 16916253 DOI: 10.1385/1-59745-074-X:59  0.313
2005 Tsui NB, Chiu RW, Ding C, El-Sheikhah A, Leung TN, Lau TK, Nicolaides KH, Lo YM. Detection of trisomy 21 by quantitative mass spectrometric analysis of single-nucleotide polymorphisms. Clinical Chemistry. 51: 2358-62. PMID 16306096 DOI: 10.1373/Clinchem.2005.056978  0.398
2005 Chim SS, Tong YK, Chiu RW, Lau TK, Leung TN, Chan LY, Oudejans CB, Ding C, Lo YM. Detection of the placental epigenetic signature of the maspin gene in maternal plasma. Proceedings of the National Academy of Sciences of the United States of America. 102: 14753-8. PMID 16203989 DOI: 10.1073/Pnas.0503335102  0.39
2005 Rachlin J, Ding C, Cantor C, Kasif S. Computational tradeoffs in multiplex PCR assay design for SNP genotyping. Bmc Genomics. 6: 102. PMID 16042802 DOI: 10.1186/1471-2164-6-102  0.534
2005 Rachlin J, Ding C, Cantor C, Kasif S. MuPlex: multi-objective multiplex PCR assay design. Nucleic Acids Research. 33: W544-7. PMID 15980531 DOI: 10.1093/Nar/Gki377  0.534
2005 McCullough RM, Cantor CR, Ding C. High-throughput alternative splicing quantification by primer extension and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Nucleic Acids Research. 33: e99. PMID 15967806 DOI: 10.1093/Nar/Gni098  0.681
2004 Ding C, Chiu RW, Lau TK, Leung TN, Chan LC, Chan AY, Charoenkwan P, Ng IS, Law HY, Ma ES, Xu X, Wanapirak C, Sanguansermsri T, Liao C, Ai MA, et al. MS analysis of single-nucleotide differences in circulating nucleic acids: Application to noninvasive prenatal diagnosis. Proceedings of the National Academy of Sciences of the United States of America. 101: 10762-7. PMID 15247415 DOI: 10.1073/Pnas.0403962101  0.556
2004 Isaacs FJ, Dwyer DJ, Ding C, Pervouchine DD, Cantor CR, Collins JJ. Engineered riboregulators enable post-transcriptional control of gene expression. Nature Biotechnology. 22: 841-7. PMID 15208640 DOI: 10.1038/Nbt986  0.493
2004 Ding C, Maier E, Roscher AA, Braun A, Cantor CR. Simultaneous quantitative and allele-specific expression analysis with real competitive PCR. Bmc Genetics. 5: 8. PMID 15128429 DOI: 10.1186/1471-2156-5-8  0.547
2004 Spira A, Beane J, Schembri F, Liu G, Ding C, Gilman S, Yang X, Cantor C, Brody JS. Noninvasive method for obtaining RNA from buccal mucosa epithelial cells for gene expression profiling. Biotechniques. 36: 484-7. PMID 15038164 DOI: 10.2144/04363Rn03  0.451
2004 Karaoz U, Murali TM, Letovsky S, Zheng Y, Ding C, Cantor CR, Kasif S. Whole-genome annotation by using evidence integration in functional-linkage networks. Proceedings of the National Academy of Sciences of the United States of America. 101: 2888-93. PMID 14981259 DOI: 10.1073/Pnas.0307326101  0.496
2004 Ding C, Cantor CR. Quantitative analysis of nucleic acids--the last few years of progress. Journal of Biochemistry and Molecular Biology. 37: 1-10. PMID 14761298 DOI: 10.5483/Bmbrep.2004.37.1.001  0.513
2003 Ding C, Cantor CR. Direct molecular haplotyping of long-range genomic DNA with M1-PCR. Proceedings of the National Academy of Sciences of the United States of America. 100: 7449-53. PMID 12802015 DOI: 10.1073/Pnas.1232475100  0.537
2003 Ding C, Cantor CR. A high-throughput gene expression analysis technique using competitive PCR and matrix-assisted laser desorption ionization time-of-flight MS. Proceedings of the National Academy of Sciences of the United States of America. 100: 3059-64. PMID 12624187 DOI: 10.1073/Pnas.0630494100  0.557
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