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Vincent Hakim - Publications

Affiliations: 
École normale supérieure Paris, Paris, Île-de-France, France 
Area:
computational neuroscience
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35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Kulkarni A, Ranft J, Hakim V. Synchronization, Stochasticity, and Phase Waves in Neuronal Networks With Spatially-Structured Connectivity. Frontiers in Computational Neuroscience. 14: 569644. PMID 33192427 DOI: 10.3389/fncom.2020.569644  0.311
2020 Hakim V, Ranft J. Lifetime of a structure evolving by cluster aggregation and particle loss, and application to postsynaptic scaffold domains. Physical Review. E. 101: 012411. PMID 32069640 DOI: 10.1103/PhysRevE.101.012411  0.3
2018 Bouvier G, Aljadeff J, Clopath C, Bimbard C, Ranft J, Blot A, Nadal JP, Brunel N, Hakim V, Barbour B. Cerebellar learning using perturbations. Elife. 7. PMID 30418871 DOI: 10.7554/Elife.31599  0.656
2018 Bouvier G, Aljadeff J, Clopath C, Bimbard C, Ranft J, Blot A, Nadal J, Brunel N, Hakim V, Barbour B. Author response: Cerebellar learning using perturbations Elife. DOI: 10.7554/Elife.31599.026  0.635
2017 Ranft J, Almeida LG, Rodriguez PC, Triller A, Hakim V. An aggregation-removal model for the formation and size determination of post-synaptic scaffold domains. Plos Computational Biology. 13: e1005516. PMID 28437460 DOI: 10.1371/Journal.Pcbi.1005516  0.312
2016 Santolini M, Sakakibara I, Gauthier M, Ribas-Aulinas F, Takahashi H, Sawasaki T, Mouly V, Concordet JP, Defossez PA, Hakim V, Maire P. MyoD reprogramming requires Six1 and Six4 homeoproteins: genome-wide cis-regulatory module analysis. Nucleic Acids Research. PMID 27302134 DOI: 10.1093/nar/gkw512  0.69
2016 Blot A, de Solages C, Ostojic S, Szapiro G, Hakim V, Léna C. Time-invariant feed-forward inhibition of Purkinje cells in the cerebellar cortex in vivo. The Journal of Physiology. PMID 26918702 DOI: 10.1113/Jp271518  0.604
2015 Murisic N, Hakim V, Kevrekidis IG, Shvartsman SY, Audoly B. From discrete to continuum models of three-dimensional deformations in epithelial sheets. Biophysical Journal. 109: 154-63. PMID 26153712 DOI: 10.1016/J.Bpj.2015.05.019  0.308
2015 Ostojic S, Szapiro G, Schwartz E, Barbour B, Brunel N, Hakim V. Neuronal morphology generates high-frequency firing resonance. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 7056-68. PMID 25948257 DOI: 10.1523/JNEUROSCI.3924-14.2015  0.756
2014 Santolini M, Mora T, Hakim V. A general pairwise interaction model provides an accurate description of in vivo transcription factor binding sites. Plos One. 9: e99015. PMID 24926895 DOI: 10.1371/Journal.Pone.0099015  0.704
2014 Sakakibara I, Santolini M, Ferry A, Hakim V, Maire P. Six homeoproteins and a Iinc-RNA at the fast MYH locus lock fast myofiber terminal phenotype. Plos Genetics. 10: e1004386. PMID 24852826 DOI: 10.1371/journal.pgen.1004386  0.681
2014 Deforet M, Hakim V, Yevick HG, Duclos G, Silberzan P. Emergence of collective modes and tri-dimensional structures from epithelial confinement. Nature Communications. 5: 3747. PMID 24796352 DOI: 10.1038/ncomms4747  0.312
2014 Rouault H, Santolini M, Schweisguth F, Hakim V. Imogene: identification of motifs and cis-regulatory modules underlying gene co-regulation. Nucleic Acids Research. 42: 6128-45. PMID 24682824 DOI: 10.1093/Nar/Gku209  0.703
2014 Brunel N, Hakim V, Richardson MJ. Single neuron dynamics and computation. Current Opinion in Neurobiology. 25: 149-55. PMID 24492069 DOI: 10.1016/j.conb.2014.01.005  0.732
2013 Menoret D, Santolini M, Fernandes I, Spokony R, Zanet J, Gonzalez I, Latapie Y, Ferrer P, Rouault H, White KP, Besse P, Hakim V, Aerts S, Payre F, Plaza S. Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization. Genome Biology. 14: R86. PMID 23972280 DOI: 10.1186/Gb-2013-14-8-R86  0.71
2012 Rouault H, Hakim V. Different cell fates from cell-cell interactions: core architectures of two-cell bistable networks. Biophysical Journal. 102: 417-26. PMID 22325263 DOI: 10.1016/J.Bpj.2011.11.4022  0.321
2010 Rouault H, Mazouni K, Couturier L, Hakim V, Schweisguth F. Genome-wide identification of cis-regulatory motifs and modules underlying gene coregulation using statistics and phylogeny. Proceedings of the National Academy of Sciences of the United States of America. 107: 14615-20. PMID 20671200 DOI: 10.1073/Pnas.1002876107  0.312
2009 Ostojic S, Brunel N, Hakim V. How connectivity, background activity, and synaptic properties shape the cross-correlation between spike trains. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 10234-53. PMID 19692598 DOI: 10.1523/JNEUROSCI.1275-09.2009  0.757
2009 Dugué GP, Brunel N, Hakim V, Schwartz E, Chat M, Lévesque M, Courtemanche R, Léna C, Dieudonné S. Electrical coupling mediates tunable low-frequency oscillations and resonance in the cerebellar Golgi cell network. Neuron. 61: 126-39. PMID 19146818 DOI: 10.1016/J.Neuron.2008.11.028  0.712
2009 Ostojic S, Brunel N, Hakim V. Synchronization properties of networks of electrically coupled neurons in the presence of noise and heterogeneities. Journal of Computational Neuroscience. 26: 369-92. PMID 19034642 DOI: 10.1007/s10827-008-0117-3  0.753
2009 Ostojic S, de Solages C, Szapiro G, Léna C, Hakim V. Irregular firing, quasi-stationary state and spike-time dependent response Bmc Neuroscience. 10. DOI: 10.1186/1471-2202-10-S1-O2  0.555
2009 Hakim V, Karma A. Laws of crack motion and phase-field models of fracture Journal of the Mechanics and Physics of Solids. 57: 342-368. DOI: 10.1016/J.Jmps.2008.10.012  0.495
2008 Roxin A, Hakim V, Brunel N. The statistics of repeating patterns of cortical activity can be reproduced by a model network of stochastic binary neurons. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 28: 10734-45. PMID 18923048 DOI: 10.1523/Jneurosci.1016-08.2008  0.701
2008 de Solages C, Szapiro G, Brunel N, Hakim V, Isope P, Buisseret P, Rousseau C, Barbour B, Léna C. High-frequency organization and synchrony of activity in the purkinje cell layer of the cerebellum. Neuron. 58: 775-88. PMID 18549788 DOI: 10.1016/J.Neuron.2008.05.008  0.695
2008 Brunel N, Hakim V. Sparsely synchronized neuronal oscillations. Chaos (Woodbury, N.Y.). 18: 015113. PMID 18377094 DOI: 10.1063/1.2779858  0.713
2008 Roxin A, Hakim V, Brunel N. The statistics of rapeating patterns of cortical activity can be reproduced by a model network of stochastic binary neurons (Journal of Neuroscience (October 15, 2008) (10734-10745)) Journal of Neuroscience. 28: 1P.  0.673
2007 Barbour B, Brunel N, Hakim V, Nadal JP. What can we learn from synaptic weight distributions? Trends in Neurosciences. 30: 622-9. PMID 17983670 DOI: 10.1016/j.tins.2007.09.005  0.661
2005 Hakim V, Karma A. Crack path prediction in anisotropic brittle materials. Physical Review Letters. 95: 235501. PMID 16384316 DOI: 10.1103/PhysRevLett.95.235501  0.496
2005 François P, Hakim V. Core genetic module: the mixed feedback loop. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 72: 031908. PMID 16241483 DOI: 10.1103/PhysRevE.72.031908  0.32
2004 Brunel N, Hakim V, Isope P, Nadal JP, Barbour B. Optimal information storage and the distribution of synaptic weights: perceptron versus Purkinje cell. Neuron. 43: 745-57. PMID 15339654 DOI: 10.1016/J.Neuron.2004.08.023  0.67
2003 Brunel N, Hakim V, Richardson MJ. Firing-rate resonance in a generalized integrate-and-fire neuron with subthreshold resonance. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 67: 051916. PMID 12786187 DOI: 10.1103/Physreve.67.051916  0.731
2003 Richardson MJ, Brunel N, Hakim V. From subthreshold to firing-rate resonance. Journal of Neurophysiology. 89: 2538-54. PMID 12611957 DOI: 10.1152/jn.00955.2002  0.74
1999 Hakim V, Karma A. Theory of spiral wave dynamics in weakly excitable media: asymptotic reduction to a kinematic model and applications. Physical Review. E, Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 60: 5073-105. PMID 11970375 DOI: 10.1103/Physreve.60.5073  0.519
1999 Brunel N, Hakim V. Fast global oscillations in networks of integrate-and-fire neurons with low firing rates. Neural Computation. 11: 1621-71. PMID 10490941 DOI: 10.1162/089976699300016179  0.718
1997 Hakim V, Karma A. Spiral wave meander in excitable media: the large core limit Physical Review Letters. 79: 665-668. DOI: 10.1103/Physrevlett.79.665  0.482
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