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Carlos R. Baiz, Ph.D. - Publications

Affiliations: 
2015- University of Texas at Austin, Austin, Texas, U.S.A. 
Area:
ultrafast nonlinear, multidimensional spectroscopy of biomolecules; optical control of biomolecular dynamics
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64 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Baiz C, Bredenbeck J, Cho M, Jansen T, Krummel A, Roberts S. Celebrating 25 years of 2D IR spectroscopy. The Journal of Chemical Physics. 160. PMID 38165102 DOI: 10.1063/5.0190809  0.596
2023 Lorenz-Ochoa KA, Baiz CR. Ultrafast Spectroscopy Reveals Slow Water Dynamics in Biocondensates. Journal of the American Chemical Society. PMID 38061016 DOI: 10.1021/jacs.3c10862  0.312
2023 Xu C, Baiz CR. Cutting through the Noise: Extracting Dynamics from Ultrafast Spectra Using Dynamic Mode Decomposition. The Journal of Physical Chemistry. A. PMID 37942956 DOI: 10.1021/acs.jpca.3c05755  0.333
2023 Maia RNA, Mitra S, Baiz CR. Extracting accurate infrared lineshapes from weak vibrational probes at low concentrations. Methodsx. 11: 102309. PMID 37577166 DOI: 10.1016/j.mex.2023.102309  0.349
2022 Zhao R, Shirley JC, Lee E, Grofe A, Li H, Baiz CR, Gao J. Origin of thiocyanate spectral shifts in water and organic solvents. The Journal of Chemical Physics. 156: 104106. PMID 35291777 DOI: 10.1063/5.0082969  0.339
2021 Baiz CR, Błasiak B, Bredenbeck J, Cho M, Choi JH, Corcelli SA, Dijkstra AG, Feng CJ, Garrett-Roe S, Ge NH, Hanson-Heine MWD, Hirst JD, Jansen TLC, Kwac K, Kubarych KJ, et al. Correction to Vibrational Spectroscopic Map, Vibrational Spectroscopy, and Intermolecular Interaction. Chemical Reviews. PMID 34709802 DOI: 10.1021/acs.chemrev.1c00758  0.717
2021 Valentine ML, Al-Mualem ZA, Baiz CR. Pump Slice Amplitudes: A Simple and Robust Method for Connecting Two-Dimensional Infrared and Fourier Transform Infrared Spectra. The Journal of Physical Chemistry. A. PMID 34259508 DOI: 10.1021/acs.jpca.1c04558  0.319
2021 Edington SC, Liu S, Baiz CR. Infrared spectroscopy probes ion binding geometries. Methods in Enzymology. 651: 157-191. PMID 33888203 DOI: 10.1016/bs.mie.2020.12.028  0.787
2020 Flanagan JC, Valentine ML, Baiz CR. Ultrafast Dynamics at Lipid-Water Interfaces. Accounts of Chemical Research. PMID 32866390 DOI: 10.1021/Acs.Accounts.0C00302  0.45
2020 Baiz CR, Błasiak B, Bredenbeck J, Cho M, Choi JH, Corcelli SA, Dijkstra AG, Feng CJ, Garrett-Roe S, Ge NH, Hanson-Heine MWD, Hirst JD, Jansen TLC, Kwac K, Kubarych KJ, et al. Vibrational Spectroscopic Map, Vibrational Spectroscopy, and Intermolecular Interaction. Chemical Reviews. PMID 32598850 DOI: 10.1021/Acs.Chemrev.9B00813  0.818
2020 Fathizadeh A, Valentine M, Baiz CR, Elber R. Phase Transition in a Heterogeneous Membrane: Atomically Detailed Picture. The Journal of Physical Chemistry Letters. 5263-5267. PMID 32525318 DOI: 10.1021/Acs.Jpclett.0C01255  0.33
2020 Venkatraman RK, Baiz CR. Ultrafast dynamics at the lipid-water interface: DMSO modulates H-bond lifetimes. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 32423219 DOI: 10.1021/Acs.Langmuir.0C00870  0.795
2020 Flanagan JC, Cardenas AE, Baiz CR. Ultrafast Spectroscopy of Lipid-Water Interfaces: Transmembrane Crowding Drives H-Bond Dynamics. The Journal of Physical Chemistry Letters. 4093-4098. PMID 32364385 DOI: 10.1021/Acs.Jpclett.0C00783  0.353
2020 Valentine ML, Cardenas AE, Elber R, Baiz CR. Calcium-Lipid Interactions Observed with Isotope-Edited Infrared Spectroscopy. Biophysical Journal. PMID 32362342 DOI: 10.1016/J.Bpj.2020.04.013  0.302
2020 Baryiames CP, Baiz CR. Slow Oil, Slow Water: Long-Range Dynamic Coupling across a Liquid-Liquid Interface. Journal of the American Chemical Society. PMID 32275819 DOI: 10.1021/Jacs.0C00817  0.329
2020 Oh KI, You X, Flanagan JC, Baiz CR. Liquid-Liquid Phase Separation Produces Fast H-Bond Dynamics in DMSO-Water Mixtures. The Journal of Physical Chemistry Letters. PMID 32069416 DOI: 10.1021/Acs.Jpclett.0C00378  0.407
2020 Oh K, Baiz CR. Molecular heterogeneity in aqueous cosolvent systems The Journal of Chemical Physics. 152: 190901. DOI: 10.1063/5.0007647  0.363
2020 Valentine ML, Cardenas AE, Elber R, Baiz CR. Fast Dynamics of Lipid Mixtures Investigated with Vibrational Spectroscopy Biophysical Journal. 118: 85a. DOI: 10.1016/J.Bpj.2019.11.631  0.435
2020 Venkatraman RK, Baiz CR. Cryoprotectants Disrupt Hydrogen-Bond Networks at the Lipid-Water Interface Biophysical Journal. 118: 80a. DOI: 10.1016/J.Bpj.2019.11.609  0.75
2019 Oh KI, Baiz CR. Empirical S=O stretch vibrational frequency map. The Journal of Chemical Physics. 151: 234107. PMID 31864235 DOI: 10.1063/1.5129464  0.444
2019 Flanagan JC, Baiz CR. Ultrafast pH-jump two-dimensional infrared spectroscopy. Optics Letters. 44: 4937-4940. PMID 31613233 DOI: 10.1364/Ol.44.004937  0.432
2019 Baryiames CP, Teel M, Baiz CR. Interfacial H-Bond Dynamics in Reverse Micelles: The Role of Surfactant Heterogeneity. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 31407910 DOI: 10.1021/Acs.Langmuir.9B01693  0.396
2019 Edington SC, Halling DB, Bennett S, Middendorf T, Aldrich R, Baiz CR. Non-additive effects of binding site mutations in calmodulin. Biochemistry. PMID 31124357 DOI: 10.1021/Acs.Biochem.9B00096  0.786
2019 Flanagan JC, Baiz CR. Site-Specific Peptide Probes Detect Buried Water in a Lipid Membrane. Biophysical Journal. PMID 31000156 DOI: 10.1016/J.Bpj.2019.03.002  0.318
2019 Edington S, Middendorf TR, Brent Halling D, Aldrich RW, Baiz CR. Ion-Dependent Binding-Site Configurations in Ef-Hand Proteins Measured with Ultrafast Infrared Spectroscopy Biophysical Journal. 116: 49a. DOI: 10.1016/J.Bpj.2018.11.307  0.777
2018 Valentine ML, Cardenas AE, Elber R, Baiz CR. Physiological Calcium Concentrations Slow Dynamics at the Lipid-Water Interface. Biophysical Journal. PMID 30269885 DOI: 10.1016/J.Bpj.2018.08.044  0.334
2018 Edington SC, Baiz CR. Vibrational Relaxation in EDTA Is Ion-Dependent. The Journal of Physical Chemistry. A. PMID 30024164 DOI: 10.1021/Acs.Jpca.8B06075  0.796
2018 Oh KI, Baiz CR. Crowding Stabilizes DMSO - Water Hydrogen-Bonding Interactions. The Journal of Physical Chemistry. B. PMID 29742900 DOI: 10.1021/Acs.Jpcb.8B02739  0.319
2018 Edington SC, Gonzalez A, Middendorf TR, Halling DB, Aldrich RW, Baiz CR. Coordination to lanthanide ions distorts binding site conformation in calmodulin. Proceedings of the National Academy of Sciences of the United States of America. PMID 29545272 DOI: 10.1073/Pnas.1722042115  0.783
2017 Baiz CR, Oh KI, Rajesh K, Stanton JF. Quantifying hydrogen-bond populations in DMSO/water mixtures. Angewandte Chemie (International Ed. in English). PMID 28521075 DOI: 10.1002/anie.201704162  0.31
2016 Edington SC, Flanagan JC, Baiz CR. An Empirical IR Frequency Map for Ester C=O Stretching Vibrations. The Journal of Physical Chemistry. A. PMID 27214642 DOI: 10.1021/Acs.Jpca.6B02887  0.807
2016 Zhang XX, Jones KC, Fitzpatrick A, Peng CS, Feng CJ, Baiz CR, Tokmakoff A. Studying Protein-Protein Binding Through T-Jump Induced Dissociation: Transient 2D IR Spectroscopy of Insulin Dimer. The Journal of Physical Chemistry. B. PMID 27203447 DOI: 10.1021/Acs.Jpcb.6B03246  0.697
2015 Baiz CR, Tokmakoff A. Structural disorder of folded proteins: isotope-edited 2D IR spectroscopy and Markov state modeling. Biophysical Journal. 108: 1747-57. PMID 25863066 DOI: 10.1016/J.Bpj.2014.12.061  0.582
2015 Stevenson P, Götz C, Baiz CR, Akerboom J, Tokmakoff A, Vaziri A. Visualizing KcsA Conformational Changes upon Ion Binding by Infrared Spectroscopy and Atomistic Modeling. The Journal of Physical Chemistry. B. 119: 5824-31. PMID 25861001 DOI: 10.1021/Acs.Jpcb.5B02223  0.676
2014 Baiz CR, Schach D, Tokmakoff A. Ultrafast 2D IR microscopy. Optics Express. 22: 18724-35. PMID 25089490 DOI: 10.1364/Oe.22.018724  0.621
2014 Baiz CR, Lin YS, Peng CS, Beauchamp KA, Voelz VA, Pande VS, Tokmakoff A. A molecular interpretation of 2D IR protein folding experiments with Markov state models. Biophysical Journal. 106: 1359-70. PMID 24655511 DOI: 10.1016/J.Bpj.2014.02.008  0.707
2014 Stevenson P, Götz C, Baiz CR, Vaziri A, Tokmakoff A. 2D Ir as an Experimental Probe of Ion-Induced Structural Changes in KCSA Biophysical Journal. 106: 539a-540a. DOI: 10.1016/J.Bpj.2013.11.3008  0.719
2014 Baiz CR, Tokmakoff A. Measuring Protein Structural Heterogeneity with Two-Dimensional Infrared Spectroscopy Biophysical Journal. 106: 459a. DOI: 10.1016/J.Bpj.2013.11.2604  0.624
2014 Peng CS, Baiz C, Reppert M, Li D, Fedeles BI, Singh V, Essigmann JM, Tokmakoff A. Observing Tautomerization of a Deoxycytidine Analog Kp1212: Molecular Origin of Lethal Mutagenesis Against Hiv Biophysical Journal. 106: 440a. DOI: 10.1016/J.Bpj.2013.11.2480  0.776
2013 Peng CS, Baiz CR, Tokmakoff A. Direct observation of ground-state lactam-lactim tautomerization using temperature-jump transient 2D IR spectroscopy. Proceedings of the National Academy of Sciences of the United States of America. 110: 9243-8. PMID 23690588 DOI: 10.1073/Pnas.1303235110  0.695
2013 Luan B, Shan B, Baiz C, Tokmakoff A, Raleigh DP. Cooperative cold denaturation: the case of the C-terminal domain of ribosomal protein L9. Biochemistry. 52: 2402-9. PMID 23461364 DOI: 10.1021/Bi3016789  0.527
2013 Baiz CR, Reppert M, Tokmakoff A. Amide I two-dimensional infrared spectroscopy: methods for visualizing the vibrational structure of large proteins. The Journal of Physical Chemistry. A. 117: 5955-61. PMID 23228111 DOI: 10.1021/Jp310689A  0.782
2013 Baiz C, Peng CS, Reppert M, Jones KC, Tokmakoff A. Two-Dimensional Infrared Spectroscopy as a Probe of Protein Folding: Bridging the Gap between Experiment and Simulation Biophysical Journal. 104: 188a. DOI: 10.1016/J.Bpj.2012.11.1062  0.812
2012 Baiz CR, Peng CS, Reppert ME, Jones KC, Tokmakoff A. Coherent two-dimensional infrared spectroscopy: quantitative analysis of protein secondary structure in solution. The Analyst. 137: 1793-9. PMID 22398665 DOI: 10.1039/C2An16031E  0.797
2012 Anna JM, Baiz CR, Ross MR, Mccanne R, Kubarych KJ. Ultrafast equilibrium and non-equilibrium chemical reaction dynamics probed with multidimensional infrared spectroscopy International Reviews in Physical Chemistry. 31: 367-419. DOI: 10.1080/0144235X.2012.716610  0.795
2011 Baiz CR, Kubarych KJ, Geva E, Sibert EL. Local-mode approach to modeling multidimensional infrared spectra of metal carbonyls. The Journal of Physical Chemistry. A. 115: 5354-63. PMID 21545166 DOI: 10.1021/Jp201641H  0.666
2011 Baiz CR, Kubarych KJ, Geva E. Molecular theory and simulation of coherence transfer in metal carbonyls and its signature on multidimensional infrared spectra. The Journal of Physical Chemistry. B. 115: 5322-39. PMID 21375310 DOI: 10.1021/Jp109357D  0.697
2011 Baiz CR, Kubarych KJ. Ultrabroadband detection of a mid-IR continuum by chirped-pulse upconversion. Optics Letters. 36: 187-9. PMID 21263495 DOI: 10.1364/Ol.36.000187  0.61
2010 King JT, Baiz CR, Kubarych KJ. Solvent-dependent spectral diffusion in a hydrogen bonded "vibrational aggregate". The Journal of Physical Chemistry. A. 114: 10590-604. PMID 20831231 DOI: 10.1021/Jp106142U  0.762
2010 Baiz CR, McCanne R, Kubarych KJ. Transient vibrational echo versus transient absorption spectroscopy: a direct experimental and theoretical comparison. Applied Spectroscopy. 64: 1037-44. PMID 20828441 DOI: 10.1366/000370210792434369  0.789
2010 Baiz CR, Kubarych KJ. Ultrafast vibrational Stark-effect spectroscopy: exploring charge-transfer reactions by directly monitoring the solvation shell response. Journal of the American Chemical Society. 132: 12784-5. PMID 20738086 DOI: 10.1021/Ja1043853  0.705
2010 Anna JM, Nee MJ, Baiz CR, McCanne R, Kubarych KJ. Measuring absorptive two-dimensional infrared spectra using chirped-pulse upconversion detection Journal of the Optical Society of America B: Optical Physics. 27: 382-393. DOI: 10.1364/Josab.27.000382  0.759
2010 Baiz CR, Kubarych KJ. Dynamic vibrational stark spectroscopy: Measuring the solvent response in ultrafast charge-transfer reactions Optics Infobase Conference Papers.  0.648
2010 Baiz CR, McCanne R, Kubarych KJ. Structurally-sensitive rebinding dynamics of solvent-caged radical pairs: Exploring the viscosity dependence Optics Infobase Conference Papers.  0.615
2010 Baiz CR, Anna JM, McCanne R, King JT, Kubarych KJ. Watching chemical reactions and dynamics with ultrafast multidimensional infrared spectroscopy Optics Infobase Conference Papers.  0.8
2010 Baiz CR, McCanne R, Anna JM, Kubarych KJ. Tracking ultrafast chemical reaction dynamics using transient 2DIR spectroscopy Optics Infobase Conference Papers.  0.78
2009 Baiz CR, McCanne R, Kubarych KJ. Structurally selective geminate rebinding dynamics of solvent-caged radicals studied with nonequilibrium infrared echo spectroscopy. Journal of the American Chemical Society. 131: 13590-1. PMID 19728710 DOI: 10.1021/Ja905459Y  0.796
2009 Baiz CR, McRobbie PL, Preketes NK, Kubarych KJ, Geva E. Two-dimensional infrared spectroscopy of dimanganese decacarbonyl and its photoproducts: an ab initio study. The Journal of Physical Chemistry. A. 113: 9617-23. PMID 19670842 DOI: 10.1021/Jp9054654  0.668
2009 Baiz CR, McCanne R, Nee MJ, Kubarych KJ. Orientational dynamics of transient molecules measured by nonequilibrium two-dimensional infrared spectroscopy. The Journal of Physical Chemistry. A. 113: 8907-16. PMID 19522493 DOI: 10.1021/Jp9027595  0.787
2009 Baiz CR, McRobbie PL, Anna JM, Geva E, Kubarych KJ. Two-dimensional infrared spectroscopy of metal carbonyls. Accounts of Chemical Research. 42: 1395-404. PMID 19453102 DOI: 10.1021/Ar9000263  0.803
2009 Baiz CR, Ledford SJ, Kubarych KJ, Dunietz BD. Beyond 7-azaindole: conjugation effects on intermolecular double hydrogen-atom transfer reactions. The Journal of Physical Chemistry. A. 113: 4862-7. PMID 19331395 DOI: 10.1021/Jp8098472  0.626
2008 Nee MJ, Baiz CR, Anna JM, McCanne R, Kubarych KJ. Multilevel vibrational coherence transfer and wavepacket dynamics probed with multidimensional IR spectroscopy. The Journal of Chemical Physics. 129: 084503. PMID 19044831 DOI: 10.1063/1.2969900  0.783
2008 Baiz CR, Nee MJ, McCanne R, Kubarych KJ. Ultrafast nonequilibrium Fourier-transform two-dimensional infrared spectroscopy. Optics Letters. 33: 2533-5. PMID 18978911 DOI: 10.1364/Ol.33.002533  0.797
2007 Baiz CR, Dunietz BD. Theoretical studies of conjugation effects on excited state intramolecular hydrogen-atom transfer reactions in model systems. The Journal of Physical Chemistry. A. 111: 10139-43. PMID 17880051 DOI: 10.1021/Jp074290I  0.33
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