Benjamin L. de Bivort, Ph.D. - Publications

Affiliations: 
2007 Harvard University, Cambridge, MA, United States 

9/57 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 de Bivort B, Buchanan S, Skutt-Kakaria K, Gajda E, Ayroles J, O'Leary C, Reimers P, Akhund-Zade J, Senft R, Maloney R, Ho S, Werkhoven Z, Smith MA. Precise Quantification of Behavioral Individuality From 80 Million Decisions Across 183,000 Flies. Frontiers in Behavioral Neuroscience. 16: 836626. PMID 35692381 DOI: 10.3389/fnbeh.2022.836626  0.627
2022 Smith MA, Honegger KS, Turner G, de Bivort B. Idiosyncratic learning performance in flies. Biology Letters. 18: 20210424. PMID 35104427 DOI: 10.1098/rsbl.2021.0424  0.68
2020 Xu C, Theisen E, Maloney R, Peng J, Santiago I, Yapp C, Werkhoven Z, Rumbaut E, Shum B, Tarnogorska D, Borycz J, Tan L, Courgeon M, Griffin T, Levin R, ... ... de Bivort B, et al. Control of Synaptic Specificity by Establishing a Relative Preference for Synaptic Partners. Neuron. 106: 355. PMID 32325060 DOI: 10.1016/j.neuron.2020.04.007  0.658
2019 Honegger KS, Smith MA, Churgin MA, Turner GC, de Bivort BL. Idiosyncratic neural coding and neuromodulation of olfactory individuality in . Proceedings of the National Academy of Sciences of the United States of America. PMID 31455738 DOI: 10.1073/pnas.1901623116  0.694
2019 Xu C, Theisen E, Maloney R, Peng J, Santiago I, Yapp C, Werkhoven Z, Rumbaut E, Shum B, Tarnogorska D, Borycz J, Tan L, Courgeon M, Meinertzhagen IA, de Bivort B, et al. Control of Synaptic Specificity by Establishing a Relative Preference for Synaptic Partners. Neuron. PMID 31300277 DOI: 10.1016/J.Neuron.2019.06.006  0.666
2018 Honegger K, de Bivort B. Stochasticity, individuality and behavior. Current Biology : Cb. 28: R8-R12. PMID 29316423 DOI: 10.1016/j.cub.2017.11.058  0.638
2012 Song E, de Bivort B, Dan C, Kunes S. Determinants of the Drosophila odorant receptor pattern. Developmental Cell. 22: 363-76. PMID 22340498 DOI: 10.1016/J.Devcel.2011.12.015  0.632
2009 de Bivort BL, Perlstein EO, Kunes S, Schreiber SL. Amino acid metabolic origin as an evolutionary influence on protein sequence in yeast. Journal of Molecular Evolution. 68: 490-7. PMID 19357800 DOI: 10.1007/S00239-009-9218-5  0.609
2007 Perlstein EO, de Bivort BL, Kunes S, Schreiber SL. Evolutionarily conserved optimization of amino acid biosynthesis. Journal of Molecular Evolution. 65: 186-96. PMID 17684697 DOI: 10.1007/S00239-007-0013-X  0.604
Low-probability matches (unlikely to be authored by this person)
2009 de Bivort BL, Guo HF, Zhong Y. Notch signaling is required for activity-dependent synaptic plasticity at the Drosophila neuromuscular junction. Journal of Neurogenetics. 23: 395-404. PMID 19863270 DOI: 10.3109/01677060902878481  0.264
2015 Buchanan SM, Kain JS, de Bivort BL. Neuronal control of locomotor handedness in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 112: 6700-5. PMID 25953337 DOI: 10.1073/Pnas.1500804112  0.253
2013 Gaudry Q, Hong EJ, Kain J, de Bivort BL, Wilson RI. Asymmetric neurotransmitter release enables rapid odour lateralization in Drosophila. Nature. 493: 424-8. PMID 23263180 DOI: 10.1038/Nature11747  0.241
2013 Kane EA, Gershow M, Afonso B, Larderet I, Klein M, Carter AR, de Bivort BL, Sprecher SG, Samuel AD. Sensorimotor structure of Drosophila larva phototaxis. Proceedings of the National Academy of Sciences of the United States of America. 110: E3868-77. PMID 24043822 DOI: 10.1073/Pnas.1215295110  0.223
2023 Krama T, Munkevics M, Krams R, Grigorjeva T, Trakimas G, Jõers P, Popovs S, Zants K, Elferts D, Rantala MJ, Sledevskis E, Contreras-Garduño J, de Bivort BL, Krams IA. Development under predation risk increases serotonin-signaling, variability of turning behavior and survival in adult fruit flies . Frontiers in Behavioral Neuroscience. 17: 1189301. PMID 37304760 DOI: 10.3389/fnbeh.2023.1189301  0.211
2019 Akhund-Zade J, Ho S, O'Leary C, de Bivort B. The effect of environmental enrichment on behavioral variability depends on genotype, behavior, and type of enrichment. The Journal of Experimental Biology. PMID 31413102 DOI: 10.1242/jeb.202234  0.21
2021 Werkhoven Z, Bravin A, Skutt-Kakaria K, Reimers P, Pallares LF, Ayroles J, de Bivort BL. The structure of behavioral variation within a genotype. Elife. 10. PMID 34664550 DOI: 10.7554/eLife.64988  0.197
2012 Kain JS, Stokes C, de Bivort BL. Phototactic personality in fruit flies and its suppression by serotonin and white. Proceedings of the National Academy of Sciences of the United States of America. 109: 19834-9. PMID 23150588 DOI: 10.1073/pnas.1211988109  0.197
2015 Ayroles JF, Buchanan SM, O'Leary C, Skutt-Kakaria K, Grenier JK, Clark AG, Hartl DL, de Bivort BL. Behavioral idiosyncrasy reveals genetic control of phenotypic variability. Proceedings of the National Academy of Sciences of the United States of America. 112: 6706-11. PMID 25953335 DOI: 10.1073/Pnas.1503830112  0.186
2015 Kain JS, Zhang S, Akhund-Zade J, Samuel AD, Klein M, de Bivort BL. Variability in thermal and phototactic preferences in Drosophila may reflect an adaptive bet-hedging strategy. Evolution; International Journal of Organic Evolution. PMID 26531165 DOI: 10.1111/Evo.12813  0.182
2023 Elya C, Lavrentovich D, Lee E, Pasadyn C, Duval J, Basak M, Saykina V, de Bivort B. Neural mechanisms of parasite-induced summiting behavior in 'zombie' . Elife. 12. PMID 37184212 DOI: 10.7554/eLife.85410  0.173
2013 Kain J, Stokes C, Gaudry Q, Song X, Foley J, Wilson R, De Bivort B. Leg-tracking and automated behavioural classification in Drosophila Nature Communications. 4. PMID 23715269 DOI: 10.1038/Ncomms2908  0.152
2020 Versace E, Caffini M, Werkhoven Z, de Bivort BL. Individual, but not population asymmetries, are modulated by social environment and genotype in Drosophila melanogaster. Scientific Reports. 10: 4480. PMID 32161330 DOI: 10.1038/s41598-020-61410-7  0.152
2007 de Bivort B, Huang S, Bar-Yam Y. Empirical multiscale networks of cellular regulation. Plos Computational Biology. 3: 1968-78. PMID 17953478 DOI: 10.1371/Journal.Pcbi.0030207  0.147
2004 de Bivort B, Huang S, Bar-Yam Y. Dynamics of cellular level function and regulation derived from murine expression array data. Proceedings of the National Academy of Sciences of the United States of America. 101: 17687-92. PMID 15598744 DOI: 10.1073/Pnas.0406707102  0.144
2022 Asahina K, de Bivort BL, Grunwald Kadow IC, Yapici N. Editorial: Revisiting Behavioral Variability: What It Reveals About Neural Circuit Structure and Function. Frontiers in Behavioral Neuroscience. 16: 956388. PMID 35783229 DOI: 10.3389/fnbeh.2022.956388  0.143
2017 Kakaria KS, de Bivort BL. Ring Attractor Dynamics Emerge from a Spiking Model of the Entire Protocerebral Bridge. Frontiers in Behavioral Neuroscience. 11: 8. PMID 28261066 DOI: 10.3389/fnbeh.2017.00008  0.139
2017 Todd JG, Kain JS, de Bivort BL. Systematic exploration of unsupervised methods for mapping behavior. Physical Biology. 14: 015002. PMID 28166059 DOI: 10.1088/1478-3975/14/1/015002  0.131
2016 Isakov A, Buchanan SM, Sullivan B, Ramachandran A, Chapman JK, Lu ES, Mahadevan L, de Bivort B. Recovery of locomotion after injury in Drosophila depends on proprioception. The Journal of Experimental Biology. PMID 26994176 DOI: 10.1242/Jeb.133652  0.13
2018 Crall JD, Switzer CM, Oppenheimer RL, Ford Versypt AN, Dey B, Brown A, Eyster M, Guérin C, Pierce NE, Combes SA, de Bivort BL. Neonicotinoid exposure disrupts bumblebee nest behavior, social networks, and thermoregulation. Science (New York, N.Y.). 362: 683-686. PMID 30409882 DOI: 10.1126/Science.Aat1598  0.128
2023 Easton-Calabria AC, Thuma JA, Cronin K, Melone G, Laskowski M, Smith MAY, Pasadyn CL, de Bivort BL, Crall JD. Colony size buffers interactions between neonicotinoid exposure and cold stress in bumblebees. Proceedings. Biological Sciences. 290: 20230555. PMID 37464757 DOI: 10.1098/rspb.2023.0555  0.12
2023 Stajich JE, Lovett B, Lee E, Macias AM, Hajek AE, de Bivort BL, Kasson MT, De Fine Licht HH, Elya C. Signatures of transposon-mediated genome inflation, host specialization, and photoentrainment in and allied entomophthoralean fungi. Biorxiv : the Preprint Server For Biology. PMID 37745330 DOI: 10.1101/2023.09.13.557621  0.113
2019 Werkhoven Z, Rohrsen C, Qin C, Brembs B, de Bivort B. MARGO (Massively Automated Real-time GUI for Object-tracking), a platform for high-throughput ethology. Plos One. 14: e0224243. PMID 31765421 DOI: 10.1371/Journal.Pone.0224243  0.11
2012 Raz S, Graham JH, Cohen A, de Bivort BL, Grishkan I, Nevo E. Growth and asymmetry of soil microfungal colonies from "Evolution Canyon," Lower Nahal Oren, Mount Carmel, Israel. Plos One. 7: e34689. PMID 22523554 DOI: 10.1371/Journal.Pone.0034689  0.109
2021 Krams IA, Krama T, Krams R, Trakimas G, Popovs S, Jõers P, Munkevics M, Elferts D, Rantala MJ, Makņa J, de Bivort BL. Serotoninergic Modulation of Phototactic Variability Underpins a Bet-Hedging Strategy in . Frontiers in Behavioral Neuroscience. 15: 659331. PMID 33935664 DOI: 10.3389/fnbeh.2021.659331  0.101
2010 de Bivort BL. Derivation of large-scale cellular regulatory networks from biological time series data. Methods in Molecular Biology (Clifton, N.J.). 662: 149-65. PMID 20824470 DOI: 10.1007/978-1-60761-800-3_7  0.096
2021 Akhund-Zade J, Lall S, Gajda E, Yoon D, Ayroles JF, de Bivort BL. Genetic basis of offspring number-body weight tradeoff in Drosophila melanogaster. G3 (Bethesda, Md.). PMID 33871609 DOI: 10.1093/g3journal/jkab129  0.094
2018 Alisch T, Crall JD, Kao AB, Zucker D, de Bivort BL. MAPLE (Modular Automated Platform for Large-scale Experiments), a robot for integrated organism-handling and phenotyping. Elife. 7. PMID 30117804 DOI: 10.7554/eLife.37166  0.091
2009 Clouse RM, De Bivort BL, Giribet G. A phylogenetic analysis for the South-east Asian mite harvestman family Stylocellidae (Opiliones:Cyphophthalmi) a combined analysis using morphometric and molecular data Invertebrate Systematics. 23: 515-529. DOI: 10.1071/Is09044  0.09
2019 Crall JD, de Bivort BL, Dey B, Ford Versypt AN. Social Buffering of Pesticides in Bumblebees: Agent-Based Modeling of the Effects of Colony Size and Neonicotinoid Exposure on Behavior Within Nests Frontiers in Ecology and Evolution. 7. DOI: 10.3389/fevo.2019.00051  0.087
2019 de Bivort B. Courtship Behavior: Hearing New Notes in Classic Songs. Current Biology : Cb. 28: R826-R828. PMID 30086313 DOI: 10.1016/j.cub.2018.06.066  0.08
2007 de Bivort BL, Chen CC, Perretti F, Negro G, Philip TM, Bar-Yam Y. Metabolic implications for the mechanism of mitochondrial endosymbiosis and human hereditary disorders. Journal of Theoretical Biology. 248: 26-36. PMID 17574602 DOI: 10.1016/J.Jtbi.2007.04.017  0.079
2009 Bar-Yam Y, Harmon D, De Bivort B. Systems biology: Attractors and democratic dynamics Science. 323: 1016-1017. PMID 19229023 DOI: 10.1126/Science.1163225  0.077
2021 Simpson JH, de Bivort BL. Orb weavers: Patterns in the movement sequences of spider web construction. Current Biology : Cb. 31: R1467-R1469. PMID 34813748 DOI: 10.1016/j.cub.2021.09.066  0.073
2016 De Bivort BL, Van Swinderen B. Evidence for selective attention in the insect brain Current Opinion in Insect Science. 15: 9-15. DOI: 10.1016/j.cois.2016.02.007  0.07
2016 de Bivort BL, van Swinderen B. Evidence for selective attention in the insect brain. Current Opinion in Insect Science. 15: 9-15. PMID 27436727 DOI: 10.1016/j.cois.2016.02.007  0.07
2010 De Bivort BL, Clouse RM, Giribet G. A morphometrics-based phylogeny of the temperate Gondwanan mite harvestmen (Opiliones, Cyphophthalmi, Pettalidae) Journal of Zoological Systematics and Evolutionary Research. 48: 294-309. DOI: 10.1111/J.1439-0469.2009.00562.X  0.066
2004 De Bivort BL, Giribet G. A new genus of cyphophthalmid from the Iberian Peninsula with a phylogenetic analysis of the Sironidae (Arachnida:Opiliones:Cyphophthalmi) and a SEM database of external morphology Invertebrate Systematics. 18: 7-52. DOI: 10.1071/Is03029  0.058
2010 De Bivort BL, Giribet G. A systematic revision of the South African Pettalidae (Arachnida:Opiliones: Cyphophthalmi) based on a combined analysis of discrete and continuous morphological characters with the description of seven new species Invertebrate Systematics. 24: 371-406. DOI: 10.1071/Is10015  0.051
2012 de Bivort BL, Clouse RM, Giribet G. A cladistic reconstruction of the ancestral mite harvestman (Arachnida, Opiliones, Cyphophthalmi): portrait of a Paleozoic detritivore. Cladistics : the International Journal of the Willi Hennig Society. 28: 582-597. PMID 34856730 DOI: 10.1111/j.1096-0031.2012.00407.x  0.049
2016 Giribet G, Boyer SL, Baker CM, Fernández R, Sharma PP, de Bivort BL, Daniels SR, Harvey MS, Griswold CE. A molecular phylogeny of the temperate Gondwanan family Pettalidae (Arachnida, Opiliones, Cyphophthalmi) and the limits of taxonomic sampling Zoological Journal of the Linnean Society. DOI: 10.1111/Zoj.12419  0.047
2012 De Bivort BL, Clouse RM, Giribet G. A cladistic reconstruction of the ancestral mite harvestman (Arachnida, Opiliones, Cyphophthalmi): Portrait of a Paleozoic detritivore Cladistics. 28: 582-597. DOI: 10.1111/J.1096-0031.2012.00407.X  0.045
2013 Giribet G, De Bivort BL, Hitchcock A, Swart P. On Speleosiro argasiformis-a troglobitic Cyphophthalmi (Arachnida: Opiliones: Pettalidae) from Table Mountain, South Africa Journal of Arachnology. 41: 416-419. DOI: 10.1636/Ha12-78.1  0.042
2016 Crall JD, Souffrant AD, Akandwanaho D, Hescock SD, Callan SE, Coronado WM, Baldwin MW, de Bivort BL. Social context modulates idiosyncrasy of behaviour in the gregarious cockroach Blaberus discoidalis Animal Behaviour. 111: 297-305. DOI: 10.1016/j.anbehav.2015.10.032  0.035
2012 Giribet G, Sharma PP, Benavides LR, Boyer SL, Clouse RM, de Bivort BL, Dimitrov D, Kawauchi GY, Murienne J, Schwendinger PJ. Evolutionary and biogeographical history of an ancient and global group of arachnids (Arachnida: Opiliones: Cyphophthalmi) with a new taxonomic arrangement Biological Journal of the Linnean Society. 105: 92-130. DOI: 10.1111/J.1095-8312.2011.01774.X  0.035
2018 Brown AEX, de Bivort B. Ethology as a physical science Nature Physics. 14: 653-657. DOI: 10.1038/S41567-018-0093-0  0.01
2011 Clouse RM, de Bivort BL, Giribet G. Phylogenetic signal in morphometric data. Cladistics : the International Journal of the Willi Hennig Society. 27: 337-340. PMID 34875789 DOI: 10.1111/j.1096-0031.2010.00346.x  0.01
2011 Clouse RM, de Bivort BL, Giribet G. Phylogenetic signal in morphometric data Cladistics. 27: 337-340. DOI: 10.1111/J.1096-0031.2010.00346.X  0.01
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