Olivier Marre - Publications

Affiliations: 
CNRS Gif/yvette, Gif-sur-Yvette, Île-de-France, France 
Area:
vision - modeling

62 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Khabou H, Orendorff E, Trapani F, Rucli M, Desrosiers M, Yger P, Dalkara D, Marre O. Optogenetic targeting of AII amacrine cells restores retinal computations performed by the inner retina. Molecular Therapy. Methods & Clinical Development. 31: 101107. PMID 37868206 DOI: 10.1016/j.omtm.2023.09.003  0.789
2023 Mahuas G, Marre O, Mora T, Ferrari U. Small-correlation expansion to quantify information in noisy sensory systems. Physical Review. E. 108: 024406. PMID 37723816 DOI: 10.1103/PhysRevE.108.024406  0.303
2023 Trapani F, Spampinato GLB, Yger P, Marre O. Differences in non-linearities determine retinal cell types. Journal of Neurophysiology. PMID 37584082 DOI: 10.1152/jn.00243.2022  0.803
2023 Cadoni S, Demené C, Alcala I, Provansal M, Nguyen D, Nelidova D, Labernède G, Lubetzki J, Goulet R, Burban E, Dégardin J, Simonutti M, Gauvain G, Arcizet F, Marre O, et al. Ectopic expression of a mechanosensitive channel confers spatiotemporal resolution to ultrasound stimulations of neurons for visual restoration. Nature Nanotechnology. PMID 37012508 DOI: 10.1038/s41565-023-01359-6  0.549
2022 Wilmet B, Callebert J, Duvoisin R, Goulet R, Tourain C, Michiels C, Frederiksen H, Schaeffel F, Marre O, Sahel JA, Audo I, Picaud S, Zeitz C. Mice Lacking with Complete Congenital Stationary Night Blindness Are a Good Model for Myopia. International Journal of Molecular Sciences. 24. PMID 36613663 DOI: 10.3390/ijms24010219  0.491
2022 Goldin MA, Lefebvre B, Virgili S, Pham Van Cang MK, Ecker A, Mora T, Ferrari U, Marre O. Context-dependent selectivity to natural images in the retina. Nature Communications. 13: 5556. PMID 36138007 DOI: 10.1038/s41467-022-33242-8  0.772
2022 Spampinato GLB, Ronzitti E, Zampini V, Ferrari U, Trapani F, Khabou H, Agraval A, Dalkara D, Picaud S, Papagiakoumou E, Marre O, Emiliani V. All-optical inter-layers functional connectivity investigation in the mouse retina. Cell Reports Methods. 2: 100268. PMID 36046629 DOI: 10.1016/j.crmeth.2022.100268  0.558
2021 Chalk M, Tkacik G, Marre O. Inferring the function performed by a recurrent neural network. Plos One. 16: e0248940. PMID 33857170 DOI: 10.1371/journal.pone.0248940  0.77
2021 Sorochynskyi O, Deny S, Marre O, Ferrari U. Predicting synchronous firing of large neural populations from sequential recordings. Plos Computational Biology. 17: e1008501. PMID 33507938 DOI: 10.1371/journal.pcbi.1008501  0.808
2021 Gauvain G, Akolkar H, Chaffiol A, Arcizet F, Khoei MA, Desrosiers M, Jaillard C, Caplette R, Marre O, Bertin S, Fovet CM, Demilly J, Forster V, Brazhnikova E, Hantraye P, et al. Optogenetic therapy: high spatiotemporal resolution and pattern discrimination compatible with vision restoration in non-human primates. Communications Biology. 4: 125. PMID 33504896 DOI: 10.1038/s42003-020-01594-w  0.538
2020 Ferrari U, Deny S, Sengupta A, Caplette R, Trapani F, Sahel JA, Dalkara D, Picaud S, Duebel J, Marre O. Towards optogenetic vision restoration with high resolution. Plos Computational Biology. 16: e1007857. PMID 32667921 DOI: 10.1371/Journal.Pcbi.1007857  0.799
2019 Matzakos-Karvouniari D, Gil L, Orendorff E, Marre O, Picaud S, Cessac B. A biophysical model explains the spontaneous bursting behavior in the developing retina. Scientific Reports. 9: 1859. PMID 30755684 DOI: 10.1038/S41598-018-38299-4  0.592
2019 Gardella C, Marre O, Mora T. Modeling the Correlated Activity of Neural Populations: A Review. Neural Computation. 31: 233-269. PMID 30576613 DOI: 10.1162/Neco_A_01154  0.422
2018 Ferrari U, Deny S, Marre O, Mora T. A Simple Model for Low Variability in Neural Spike Trains. Neural Computation. 1-28. PMID 30148708 DOI: 10.1162/Neco_A_01125  0.795
2018 Nghiem TA, Telenczuk B, Marre O, Destexhe A, Ferrari U. Maximum-entropy models reveal the excitatory and inhibitory correlation structures in cortical neuronal activity. Physical Review. E. 98: 012402. PMID 30110850 DOI: 10.1103/Physreve.98.012402  0.399
2018 Botella-Soler V, Deny S, Martius G, Marre O, Tkačik G. Nonlinear decoding of a complex movie from the mammalian retina. Plos Computational Biology. 14: e1006057. PMID 29746463 DOI: 10.1371/Journal.Pcbi.1006057  0.807
2018 Yger P, Spampinato GL, Esposito E, Lefebvre B, Deny S, Gardella C, Stimberg M, Jetter F, Zeck G, Picaud S, Duebel J, Marre O. A spike sorting toolbox for up to thousands of electrodes validated with ground truth recordingsand. Elife. 7. PMID 29557782 DOI: 10.7554/Elife.34518  0.768
2018 Gardella C, Marre O, Mora T. Blindfold learning of an accurate neural metric. Proceedings of the National Academy of Sciences of the United States of America. PMID 29531065 DOI: 10.1073/Pnas.1718710115  0.38
2018 Chalk M, Marre O, Tkačik G. Toward a unified theory of efficient, predictive, and sparse coding. Proceedings of the National Academy of Sciences of the United States of America. 115: 186-191. PMID 29259111 DOI: 10.1073/Pnas.1711114115  0.78
2018 Yger P, Spampinato GL, Esposito E, Lefebvre B, Deny S, Gardella C, Stimberg M, Jetter F, Zeck G, Picaud S, Duebel J, Marre O. Author response: A spike sorting toolbox for up to thousands of electrodes validated with ground truth recordings in vitro and in vivo Elife. DOI: 10.7554/Elife.34518.015  0.759
2018 Lefebvre B, Stimberg M, Marre O, Yger P. Online template-matching based spike sorting for microelectrode arrays with hundreds of channels Frontiers in Cellular Neuroscience. 12. DOI: 10.3389/conf.fncel.2018.38.00031  0.76
2018 Ferrari U, Deny S, Chalk M, Tkačik G, Marre O, Mora T. Separating intrinsic interactions from extrinsic correlations in a network of sensory neurons Physical Review E. 98. DOI: 10.1103/Physreve.98.042410  0.809
2017 Ferrari U, Gardella C, Marre O, Mora T. Closed-Loop Estimation of Retinal Network Sensitivity by Local Empirical Linearization. Eneuro. 4. PMID 29379871 DOI: 10.1523/Eneuro.0166-17.2017  0.415
2017 Deny S, Ferrari U, Macé E, Yger P, Caplette R, Picaud S, Tkačik G, Marre O. Multiplexed computations in retinal ganglion cells of a single type. Nature Communications. 8: 1964. PMID 29213097 DOI: 10.1038/S41467-017-02159-Y  0.763
2017 Chaffiol A, Caplette R, Jaillard C, Brazhnikova E, Desrosiers M, Dubus E, Duhamel L, Macé E, Marre O, Benoit P, Hantraye P, Bemelmans AP, Bamberg E, Duebel J, Sahel JA, et al. A New Promoter Allows Optogenetic Vision Restoration with Enhanced Sensitivity in Macaque Retina. Molecular Therapy : the Journal of the American Society of Gene Therapy. PMID 28807567 DOI: 10.1016/J.Ymthe.2017.07.011  0.587
2017 Lefebvre B, Yger P, Marre O. Recent progress in multi-electrode spike sorting methods. Journal of Physiology, Paris. PMID 28263793 DOI: 10.1016/j.jphysparis.2017.02.005  0.787
2017 Newton AJH, Seidenstein AH, McDougal RA, Pérez-Cervera A, Huguet G, M-Seara T, Haimerl C, Angulo-Garcia D, Torcini A, Cossart R, Malvache A, Skiker K, Maouene M, Ragognetti G, Lorusso L, ... ... Marre O, et al. 26th Annual Computational Neuroscience Meeting (CNS*2017): Part 3 Bmc Neuroscience. 18. DOI: 10.1186/S12868-017-0372-1  0.734
2017 Denham S, Poirazi P, De Schutter E, Friston K, Chan HK, Nowotny T, Han D, Hong S, Rosay S, Wernle T, Treves A, Goethals S, Brette R, Van Pottelbergh T, Sepulchre R, ... ... Marre O, et al. 26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1 Bmc Neuroscience. 18. DOI: 10.1186/S12868-017-0370-3  0.629
2016 Prentice JS, Marre O, Ioffe ML, Loback AR, Tkačik G, Berry MJ. Error-Robust Modes of the Retinal Population Code. Plos Computational Biology. 12: e1005148. PMID 27855154 DOI: 10.1371/Journal.Pcbi.1005148  0.684
2016 Sengupta A, Chaffiol A, Macé E, Caplette R, Desrosiers M, Lampič M, Forster V, Marre O, Lin JY, Sahel JA, Picaud S, Dalkara D, Duebel J. Red-shifted channelrhodopsin stimulation restores light responses in blind mice, macaque retina, and human retina. Embo Molecular Medicine. PMID 27679671 DOI: 10.15252/Emmm.201505699  0.569
2016 Gardella C, Marre O, Mora T. A Tractable Method for Describing Complex Couplings between Neurons and Population Rate. Eneuro. 3. PMID 27570827 DOI: 10.1523/Eneuro.0160-15.2016  0.345
2015 Tkačik G, Mora T, Marre O, Amodei D, Palmer SE, Berry MJ, Bialek W. Thermodynamics and signatures of criticality in a network of neurons. Proceedings of the National Academy of Sciences of the United States of America. 112: 11508-13. PMID 26330611 DOI: 10.1073/Pnas.1514188112  0.694
2015 Marre O, Botella-Soler V, Simmons KD, Mora T, Tkačik G, Berry MJ. High Accuracy Decoding of Dynamical Motion from a Large Retinal Population. Plos Computational Biology. 11: e1004304. PMID 26132103 DOI: 10.1371/Journal.Pcbi.1004304  0.698
2015 Palmer SE, Marre O, Berry MJ, Bialek W. Predictive information in a sensory population. Proceedings of the National Academy of Sciences of the United States of America. 112: 6908-13. PMID 26038544 DOI: 10.1073/pnas.1506855112  0.36
2015 Mora T, Deny S, Marre O. Dynamical criticality in the collective activity of a population of retinal neurons. Physical Review Letters. 114: 078105. PMID 25763977 DOI: 10.1103/Physrevlett.114.078105  0.799
2015 Akolkar H, Meyer C, Clady Z, Marre O, Bartolozzi C, Panzeri S, Benosman R. What can neuromorphic event-driven precise timing add to spike-based pattern recognition? Neural Computation. 27: 561-93. PMID 25602775 DOI: 10.1162/Neco_A_00703  0.376
2015 Macé E, Caplette R, Marre O, Sengupta A, Chaffiol A, Barbe P, Desrosiers M, Bamberg E, Sahel JA, Picaud S, Duebel J, Dalkara D. Targeting channelrhodopsin-2 to ON-bipolar cells with vitreally administered AAV Restores ON and OFF visual responses in blind mice. Molecular Therapy : the Journal of the American Society of Gene Therapy. 23: 7-16. PMID 25095892 DOI: 10.1038/Mt.2014.154  0.59
2015 Marre O, Botella-Soler V, Simmons KD, Mora T, Tkačik G, Berry MJ. High Accuracy Decoding of Dynamical Motion from a Large Retinal Population Plos Computational Biology. 11. DOI: 10.1371/journal.pcbi.1004304  0.602
2014 Fournier J, Monier C, Levy M, Marre O, Sári K, Kisvárday ZF, Frégnac Y. Hidden complexity of synaptic receptive fields in cat V1. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 34: 5515-28. PMID 24741042 DOI: 10.1523/Jneurosci.0474-13.2014  0.777
2014 Tkačik G, Marre O, Amodei D, Schneidman E, Bialek W, Berry MJ. Searching for collective behavior in a large network of sensory neurons. Plos Computational Biology. 10: e1003408. PMID 24391485 DOI: 10.1371/Journal.Pcbi.1003408  0.696
2013 Baudot P, Levy M, Marre O, Monier C, Pananceau M, Frégnac Y. Animation of natural scene by virtual eye-movements evokes high precision and low noise in V1 neurons. Frontiers in Neural Circuits. 7: 206. PMID 24409121 DOI: 10.3389/Fncir.2013.00206  0.801
2013 Bendali A, Lorach H, Djilas M, Marre O, Bensoman R, Rousseau L, Lissorgues G, Scorsone E, Bergonzo P, Garrido JA, Sahel JA, Picaud S. [Restoring vision in blind patients following photoreceptor degeneration: clinical results and future challenges]. Biologie Aujourd'Hui. 207: 123-32. PMID 24103342 DOI: 10.1051/Jbio/2013008  0.578
2013 Rajan K, Marre O, Tka?ik G. Learning quadratic receptive fields from neural responses to natural stimuli. Neural Computation. 25: 1661-92. PMID 23607557 DOI: 10.1162/Neco_A_00463  0.423
2013 Chen EY, Marre O, Fisher C, Schwartz G, Levy J, da Silveira RA, da Silviera RA, Berry MJ. Alert response to motion onset in the retina. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 120-32. PMID 23283327 DOI: 10.1523/Jneurosci.3749-12.2013  0.343
2013 Lorach H, Marre O, Sahel JA, Benosman R, Picaud S. Neural stimulation for visual rehabilitation: advances and challenges. Journal of Physiology, Paris. 107: 421-31. PMID 23148976 DOI: 10.1016/J.Jphysparis.2012.10.003  0.587
2013 MATONTI F, ROUX S, MARRE O, PICAUD S, CHAVANE F. Analysis of retinal and cortical response to electrical stimulation by subretinal implant in rodent Acta Ophthalmologica. 91: 0-0. DOI: 10.1111/J.1755-3768.2013.T025.X  0.756
2013 Marre O, Destexhe A. Exploring the Neural Manifold Physics. 6. DOI: 10.1103/Physics.6.11  0.373
2013 Berry MJ, Tka?ik G, Dubuis J, Marre O, Da Silveira RA. A simple method for estimating the entropy of neural activity Journal of Statistical Mechanics: Theory and Experiment. 2013. DOI: 10.1088/1742-5468/2013/03/P03015  0.327
2013 Tka?ik G, Marre O, Mora T, Amodei D, Berry MJ, Bialek W. The simplest maximum entropy model for collective behavior in a neural network Journal of Statistical Mechanics: Theory and Experiment. 2013. DOI: 10.1088/1742-5468/2013/03/P03011  0.398
2013 Nasser H, Marre O, Cessac B. Spatio-temporal spike train analysis for large scale networks using the maximum entropy principle and Monte Carlo method Journal of Statistical Mechanics: Theory and Experiment. 2013. DOI: 10.1088/1742-5468/2013/03/P03006  0.391
2012 Marre O, Amodei D, Deshmukh N, Sadeghi K, Soo F, Holy TE, Berry MJ. Mapping a complete neural population in the retina. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 14859-73. PMID 23100409 DOI: 10.1523/Jneurosci.0723-12.2012  0.453
2012 Lorach H, Benosman R, Marre O, Ieng SH, Sahel JA, Picaud S. Artificial retina: the multichannel processing of the mammalian retina achieved with a neuromorphic asynchronous light acquisition device. Journal of Neural Engineering. 9: 066004. PMID 23075696 DOI: 10.1088/1741-2560/9/6/066004  0.605
2012 Vasquez JC, Marre O, Palacios AG, Berry MJ, Cessac B. Gibbs distribution analysis of temporal correlations structure in retina ganglion cells. Journal of Physiology, Paris. 106: 120-7. PMID 22115900 DOI: 10.1016/J.Jphysparis.2011.11.001  0.393
2011 Chavane F, Sharon D, Jancke D, Marre O, Frégnac Y, Grinvald A. Lateral Spread of Orientation Selectivity in V1 is Controlled by Intracortical Cooperativity. Frontiers in Systems Neuroscience. 5: 4. PMID 21629708 DOI: 10.3389/Fnsys.2011.00004  0.774
2010 Frégnac Y, Pananceau M, René A, Huguet N, Marre O, Levy M, Shulz DE. A Re-Examination of Hebbian-Covariance Rules and Spike Timing-Dependent Plasticity in Cat Visual Cortex in vivo. Frontiers in Synaptic Neuroscience. 2: 147. PMID 21423533 DOI: 10.3389/fnsyn.2010.00147  0.796
2010 Fregnac Y, Baudot P, Chavane F, Lorenceau J, Marre O, Monier C, Pananceau M, Carelli PV, Sadoc G. Multiscale functional imaging in V1 and cortical correlates of apparent motion Dynamics of Visual Motion Processing: Neuronal, Behavioral, and Computational Approaches. 73-93. DOI: 10.1007/978-1-4419-0781-3_4  0.759
2009 Fregnac Y, Baudot P, Chavane F, Marre O, Monier C, Pananceau M, Sadoc G. [Multiscale functional imaging: reconstructing network dynamics from the synaptic echoes recorded in a single visual cortex neuron]. Bulletin De L'AcadéMie Nationale De MéDecine. 193: 851-62. PMID 20120274  0.804
2009 Marre O, Yger P, Davison AP, Frégnac Y. Reliable recall of spontaneous activity patterns in cortical networks. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 14596-606. PMID 19923292 DOI: 10.1523/JNEUROSCI.0753-09.2009  0.791
2009 El Boustani S, Marre O, Béhuret S, Baudot P, Yger P, Bal T, Destexhe A, Frégnac Y. Network-state modulation of power-law frequency-scaling in visual cortical neurons. Plos Computational Biology. 5: e1000519. PMID 19779556 DOI: 10.1371/Journal.Pcbi.1000519  0.769
2009 Marre O, El Boustani S, Frégnac Y, Destexhe A. Prediction of spatiotemporal patterns of neural activity from pairwise correlations. Physical Review Letters. 102: 138101. PMID 19392405 DOI: 10.1103/Physrevlett.102.138101  0.784
2009 Yger P, El Boustani S, Marre O, Davison AP, Destexhe A, Frégnac Y. Spatial organization of evoked neuronal dynamics in 2D recurrent networks, with or without structured stimulation Bmc Neuroscience. 10. DOI: 10.1186/1471-2202-10-S1-P94  0.798
2009 Fregnac Y, Baudot P, Chavane F, Marre O, Monier C, Pananceau M, Sadoc G. Imagerie fonctionnelle multi-échelle : reconstruction de la dynamique corticale à partir des échos synaptiques enregistrés dans un seul neurone Bulletin De L'AcadéMie Nationale De MéDecine. 193: 851-862. DOI: 10.1016/S0001-4079(19)32526-9  0.745
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