| Year |
Citation |
Score |
| 2024 |
Moore AFT, Berhie Y, Weislow IS, Koculi E. Substrate Specificities of DDX1: A Human DEAD-box protein. Biorxiv : the Preprint Server For Biology. PMID 38260591 DOI: 10.1101/2024.01.09.573566 |
0.429 |
|
| 2023 |
Narayan G, Gracia Mazuca LA, Cho SS, Mohl JE, Koculi E. RNA Post-transcriptional Modifications of an Early-Stage Large-Subunit Ribosomal Intermediate. Biochemistry. 62: 2908-2915. PMID 37751522 DOI: 10.1021/acs.biochem.3c00291 |
0.435 |
|
| 2022 |
Koculi E, Cho SS. RNA Post-Transcriptional Modifications in Two Large Subunit Intermediates Populated in Cells Expressing Helicase Inactive R331A DbpA. Biochemistry. 61: 833-842. PMID 35481783 DOI: 10.1021/acs.biochem.2c00096 |
0.318 |
|
| 2021 |
Moore AFT, de Victoria AL, Koculi E. Interactions of the C-Terminal Truncated DEAD-Box Protein DDX3X With RNA and Nucleotide Substrates. Acs Omega. 6: 12640-12646. PMID 34056415 DOI: 10.1021/acsomega.1c00700 |
0.43 |
|
| 2018 |
Gentry RC, Koculi E. Identifying the RNA Kinetic Traps in Ribosome Assembly Biophysical Journal. 114: 593a-594a. DOI: 10.1016/J.Bpj.2017.11.3244 |
0.541 |
|
| 2017 |
López de Victoria A, Moore AFT, Gittis AG, Koculi E. Kinetics and Thermodynamics of DbpA Protein's C-Terminal Domain Interaction with RNA. Acs Omega. 2: 8033-8038. PMID 29214235 DOI: 10.1021/acsomega.7b01205 |
0.501 |
|
| 2017 |
Moore AF, Lopez A, Victoria d, Koculi E. Deciphering the Action Mechanism of DDX3: An RNA Helicase Implicated in Cancer Propagation and Pathogenic Viral Infection Biophysical Journal. 112: 73a. DOI: 10.1016/J.Bpj.2016.11.437 |
0.474 |
|
| 2016 |
Moore AF, Gentry RC, Koculi E. DbpA is a region-specific RNA helicase. Biopolymers. PMID 27813083 DOI: 10.1002/Bip.23001 |
0.565 |
|
| 2016 |
Gentry RC, Childs JJ, Gevorkyan J, Gerasimova YV, Koculi E. Time course of large ribosomal subunit assembly in E. coli cells overexpressing a helicase inactive DbpA protein. Rna (New York, N.Y.). PMID 27194011 DOI: 10.1261/Rna.055137.115 |
0.339 |
|
| 2016 |
Childs JJ, Gentry RC, Moore AF, Koculi E. The DbpA catalytic core unwinds double-helix substrates by directly loading on them. Rna (New York, N.Y.). PMID 26755693 DOI: 10.1261/Rna.052928.115 |
0.542 |
|
| 2015 |
Childs JJ, Gevorkyan J, Koculi E. RNA Structural Modulation in the Heart of the Ribosome Biophysical Journal. 108: 390a. DOI: 10.1016/J.Bpj.2014.11.2139 |
0.494 |
|
| 2015 |
Victoria ALd, Koculi E. Targeting the Human DEAD-Box RNA Helicase, DDX3, as a Novel Strategy to Inhibit Aggressive Breast Cancer Metastasis Biophysical Journal. 108. DOI: 10.1016/J.Bpj.2014.11.1242 |
0.349 |
|
| 2012 |
Koculi E, Cho SS, Desai R, Thirumalai D, Woodson SA. Folding path of P5abc RNA involves direct coupling of secondary and tertiary structures. Nucleic Acids Research. 40: 8011-20. PMID 22641849 DOI: 10.1093/Nar/Gks468 |
0.624 |
|
| 2009 |
Woodson SA, Koculi E. Analysis of RNA folding by native polyacrylamide gel electrophoresis. Methods in Enzymology. 469: 189-208. PMID 20946790 DOI: 10.1016/S0076-6879(09)69009-1 |
0.603 |
|
| 2007 |
Pedrini B, Placzek WJ, Koculi E, Alimenti C, LaTerza A, Luporini P, Wüthrich K. Cold-adaptation in sea-water-borne signal proteins: sequence and NMR structure of the pheromone En-6 from the Antarctic ciliate Euplotes nobilii. Journal of Molecular Biology. 372: 277-86. PMID 17663000 DOI: 10.1016/J.Jmb.2007.06.046 |
0.321 |
|
| 2007 |
Koculi E, Hyeon C, Thirumalai D, Woodson SA. Charge density of divalent metal cations determines RNA stability. Journal of the American Chemical Society. 129: 2676-82. PMID 17295487 DOI: 10.1021/Ja068027R |
0.614 |
|
| 2006 |
Koculi E, Thirumalai D, Woodson SA. Counterion charge density determines the position and plasticity of RNA folding transition states. Journal of Molecular Biology. 359: 446-54. PMID 16626736 DOI: 10.1016/J.Jmb.2006.03.031 |
0.621 |
|
| 2004 |
Koculi E, Lee NK, Thirumalai D, Woodson SA. Folding of the Tetrahymena ribozyme by polyamines: importance of counterion valence and size. Journal of Molecular Biology. 341: 27-36. PMID 15312760 DOI: 10.1016/J.Jmb.2004.06.008 |
0.654 |
|
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