Year |
Citation |
Score |
2023 |
Abdill RJ, Graham SP, Rubinetti V, Albert FW, Greene CS, Davis S, Blekhman R. Integration of 168,000 samples reveals global patterns of the human gut microbiome. Biorxiv : the Preprint Server For Biology. PMID 37873416 DOI: 10.1101/2023.10.11.560955 |
0.766 |
|
2022 |
Fink I, Abdill RJ, Blekhman R, Grieneisen L. : Visualizing Microbiome Time Series Data in R. Msystems. e0138021. PMID 35499306 DOI: 10.1128/msystems.01380-21 |
0.741 |
|
2022 |
Abdill RJ, Adamowicz EM, Blekhman R. Public human microbiome data are dominated by highly developed countries. Plos Biology. 20: e3001536. PMID 35167588 DOI: 10.1371/journal.pbio.3001536 |
0.756 |
|
2020 |
Mars RAT, Yang Y, Ward T, Houtti M, Priya S, Lekatz HR, Tang X, Sun Z, Kalari KR, Korem T, Bhattarai Y, Zheng T, Bar N, Frost G, Johnson AJ, ... ... Blekhman R, et al. Longitudinal Multi-omics Reveals Subset-Specific Mechanisms Underlying Irritable Bowel Syndrome. Cell. PMID 32916129 DOI: 10.1016/J.Cell.2020.08.007 |
0.351 |
|
2020 |
Grieneisen L, Muehlbauer AL, Blekhman R. Microbial control of host gene regulation and the evolution of host-microbiome interactions in primates. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 375: 20190598. PMID 32772669 DOI: 10.1098/Rstb.2019.0598 |
0.4 |
|
2020 |
Abdill RJ, Adamowicz EM, Blekhman R. International authorship and collaboration across bioRxiv preprints. Elife. 9. PMID 32716295 DOI: 10.7554/Elife.58496 |
0.735 |
|
2020 |
Dayama G, Priya S, Niccum DE, Khoruts A, Blekhman R. Interactions between the gut microbiome and host gene regulation in cystic fibrosis. Genome Medicine. 12: 12. PMID 31992345 DOI: 10.1186/S13073-020-0710-2 |
0.314 |
|
2019 |
Priya S, Blekhman R. Population dynamics of the human gut microbiome: change is the only constant. Genome Biology. 20: 150. PMID 31366367 DOI: 10.1186/S13059-019-1775-3 |
0.334 |
|
2019 |
Mangul S, Mosqueiro T, Abdill RJ, Duong D, Mitchell K, Sarwal V, Hill B, Brito J, Littman RJ, Statz B, Lam AK, Dayama G, Grieneisen L, Martin LS, Flint J, ... ... Blekhman R, et al. Challenges and recommendations to improve the installability and archival stability of omics computational tools. Plos Biology. 17: e3000333. PMID 31220077 DOI: 10.1371/Journal.Pbio.3000333 |
0.73 |
|
2019 |
Sharma AK, Pafčo B, Vlčková K, Červená B, Kreisinger J, Davison S, Beeri K, Fuh T, Leigh SR, Burns MB, Blekhman R, Petrželková KJ, Gomez A. Mapping gastrointestinal gene expression patterns in wild primates and humans via fecal RNA-seq. Bmc Genomics. 20: 493. PMID 31200636 DOI: 10.1186/S12864-019-5813-Z |
0.357 |
|
2019 |
Abdill RJ, Blekhman R. Rxivist.org: Sorting biology preprints using social media and readership metrics. Plos Biology. 17: e3000269. PMID 31112533 DOI: 10.1371/Journal.Pbio.3000269 |
0.736 |
|
2019 |
Abdill RJ, Blekhman R. Meta-Research: Tracking the popularity and outcomes of all bioRxiv preprints. Elife. 8. PMID 31017570 DOI: 10.7554/Elife.45133 |
0.74 |
|
2019 |
Devoto AE, Santini JM, Olm MR, Anantharaman K, Munk P, Tung J, Archie EA, Turnbaugh PJ, Seed KD, Blekhman R, Aarestrup FM, Thomas BC, Banfield JF. Megaphages infect Prevotella and variants are widespread in gut microbiomes. Nature Microbiology. PMID 30692672 DOI: 10.1038/S41564-018-0338-9 |
0.39 |
|
2018 |
Brooks AW, Priya S, Blekhman R, Bordenstein SR. Gut microbiota diversity across ethnicities in the United States. Plos Biology. 16: e2006842. PMID 30513082 DOI: 10.1371/Journal.Pbio.2006842 |
0.331 |
|
2018 |
Clayton JB, Gomez A, Amato K, Knights D, Travis DA, Blekhman R, Knight R, Leigh S, Stumpf R, Wolf T, Glander KE, Cabana F, Johnson TJ. The gut microbiome of nonhuman primates: Lessons in ecology and evolution. American Journal of Primatology. e22867. PMID 29862519 DOI: 10.1002/Ajp.22867 |
0.389 |
|
2018 |
Gomez A, Torralba M, Nelson KE, Stumpf R, Blekhman R, Petrzelkova K. Host microbe interactions in the primate gut: Implications for human origins The Faseb Journal. 32: 101.1-101.1. DOI: 10.1096/Fasebj.32.1_Supplement.101.1 |
0.323 |
|
2017 |
Lynch J, Tang K, Priya S, Sands J, Sands M, Tang E, Mukherjee S, Knights D, Blekhman R. HOMINID: A framework for identifying associations between host genetic variation and microbiome composition. Gigascience. PMID 29126115 DOI: 10.1093/Gigascience/Gix107 |
0.318 |
|
2017 |
Luca F, Kupfer SS, Knights D, Khoruts A, Blekhman R. Functional Genomics of Host-Microbiome Interactions in Humans. Trends in Genetics : Tig. PMID 29107345 DOI: 10.1016/J.Tig.2017.10.001 |
0.356 |
|
2017 |
Xu D, Pavlidis P, Taskent RO, Alachiotis N, Flanagan C, DeGiorgio M, Blekhman R, Ruhl S, Gokcumen O. Archaic Hominin Introgression in Africa Contributes to Functional Salivary MUC7 Genetic Variation. Molecular Biology and Evolution. 34: 2704-2715. PMID 28957509 DOI: 10.1093/Molbev/Msx206 |
0.334 |
|
2016 |
Nédélec Y, Sanz J, Baharian G, Szpiech ZA, Pacis A, Dumaine A, Grenier JC, Freiman A, Sams AJ, Hebert S, Pagé Sabourin A, Luca F, Blekhman R, Hernandez RD, Pique-Regi R, et al. Genetic Ancestry and Natural Selection Drive Population Differences in Immune Responses to Pathogens. Cell. 167: 657-669.e21. PMID 27768889 DOI: 10.1016/J.Cell.2016.09.025 |
0.326 |
|
2016 |
Eaaswarkhanth M, Xu D, Flanagan C, Rzhetskaya M, Hayes MG, Blekhman R, Jablonski N, Gokcumen O. Atopic Dermatitis Susceptibility Variants In Filaggrin Hitchhike Hornerin Selective Sweep. Genome Biology and Evolution. PMID 27678121 DOI: 10.1093/Gbe/Evw242 |
0.362 |
|
2016 |
Xu D, Pavlidis P, Thamadilok S, Redwood E, Fox S, Blekhman R, Ruhl S, Gokcumen O. Recent evolution of the salivary mucin MUC7. Scientific Reports. 6: 31791. PMID 27558399 DOI: 10.1038/Srep31791 |
0.355 |
|
2016 |
Blekhman R, Tang K, Archie EA, Barreiro LB, Johnson ZP, Wilson ME, Kohn J, Yuan ML, Gesquiere L, Grieneisen LE, Tung J. Common methods for fecal sample storage in field studies yield consistent signatures of individual identity in microbiome sequencing data. Scientific Reports. 6: 31519. PMID 27528013 DOI: 10.1038/Srep31519 |
0.314 |
|
2016 |
Gomez A, Petrzelkova KJ, Burns MB, Yeoman CJ, Amato KR, Vlckova K, Modry D, Todd A, Jost Robinson CA, Remis MJ, Torralba MG, Morton E, Umaña JD, Carbonero F, Gaskins HR, ... ... Blekhman R, et al. Gut Microbiome of Coexisting BaAka Pygmies and Bantu Reflects Gradients of Traditional Subsistence Patterns. Cell Reports. PMID 26923597 DOI: 10.1016/J.Celrep.2016.02.013 |
0.321 |
|
2015 |
Morton ER, Lynch J, Froment A, Lafosse S, Heyer E, Przeworski M, Blekhman R, Ségurel L. Variation in Rural African Gut Microbiota Is Strongly Correlated with Colonization by Entamoeba and Subsistence. Plos Genetics. 11: e1005658. PMID 26619199 DOI: 10.1371/Journal.Pgen.1005658 |
0.339 |
|
2015 |
Blekhman R, Goodrich JK, Huang K, Sun Q, Bukowski R, Bell JT, Spector TD, Keinan A, Ley RE, Gevers D, Clark AG. Host genetic variation impacts microbiome composition across human body sites. Genome Biology. 16: 191. PMID 26374288 DOI: 10.1186/S13059-015-0759-1 |
0.367 |
|
2015 |
Gomez A, Rothman JM, Petrzelkova K, Yeoman CJ, Vlckova K, Umaña JD, Carr M, Modry D, Todd A, Torralba M, Nelson KE, Stumpf RM, Wilson BA, Blekhman R, White BA, et al. Temporal variation selects for diet-microbe co-metabolic traits in the gut of Gorilla spp. The Isme Journal. PMID 26315972 DOI: 10.1038/Ismej.2015.146 |
0.332 |
|
2015 |
Yu F, Lu J, Liu X, Gazave E, Chang D, Raj S, Hunter-Zinck H, Blekhman R, Arbiza L, Van Hout C, Morrison A, Johnson AD, Bis J, Cupples LA, Psaty BM, et al. Population genomic analysis of 962 whole genome sequences of humans reveals natural selection in non-coding regions. Plos One. 10: e0121644. PMID 25807536 DOI: 10.1371/Journal.Pone.0121644 |
0.319 |
|
2014 |
Goodrich JK, Waters JL, Poole AC, Sutter JL, Koren O, Blekhman R, Beaumont M, Van Treuren W, Knight R, Bell JT, Spector TD, Clark AG, Ley RE. Human genetics shape the gut microbiome. Cell. 159: 789-99. PMID 25417156 DOI: 10.1016/J.Cell.2014.09.053 |
0.307 |
|
2014 |
Blekhman R, Perry GH, Shahbaz S, Fiehn O, Clark AG, Gilad Y. Comparative metabolomics in primates reveals the effects of diet and gene regulatory variation on metabolic divergence. Scientific Reports. 4: 5809. PMID 25069065 DOI: 10.1038/Srep05809 |
0.59 |
|
2012 |
Blekhman R. A database of orthologous exons in primates for comparative analysis of RNA-seq data Nature Precedings. 7: 1-1. DOI: 10.1038/Npre.2012.7054.1 |
0.338 |
|
2011 |
Cain CE, Blekhman R, Marioni JC, Gilad Y. Gene expression differences among primates are associated with changes in a histone epigenetic modification. Genetics. 187: 1225-34. PMID 21321133 DOI: 10.1534/Genetics.110.126177 |
0.688 |
|
2010 |
Barreiro LB, Marioni JC, Blekhman R, Stephens M, Gilad Y. Functional comparison of innate immune signaling pathways in primates. Plos Genetics. 6: e1001249. PMID 21187902 DOI: 10.1371/Journal.Pgen.1001249 |
0.569 |
|
2010 |
Blekhman R, Marioni JC, Zumbo P, Stephens M, Gilad Y. Sex-specific and lineage-specific alternative splicing in primates. Genome Research. 20: 180-9. PMID 20009012 DOI: 10.1101/Gr.099226.109 |
0.61 |
|
2010 |
Bainer R, Marioni J, Barriero L, Blekhman R, Onel K, Gilad Y. Abstract LB-332: MDM4 transcription is discordantly regulated by common variants of p53 Cancer Research. 70. DOI: 10.1158/1538-7445.Am10-Lb-332 |
0.716 |
|
2009 |
Blekhman R, Oshlack A, Gilad Y. Segmental duplications contribute to gene expression differences between humans and chimpanzees. Genetics. 182: 627-30. PMID 19332884 DOI: 10.1534/Genetics.108.099960 |
0.601 |
|
2009 |
De la Cruz O, Blekhman R, Zhang X, Nicolae D, Firestein S, Gilad Y. A signature of evolutionary constraint on a subset of ectopically expressed olfactory receptor genes. Molecular Biology and Evolution. 26: 491-4. PMID 19103638 DOI: 10.1093/Molbev/Msn294 |
0.568 |
|
2009 |
Blekhman R, Oshlack A, Chabot AE, Smyth GK, Gilad Y. Correction: Gene Regulation in Primates Evolves under Tissue-Specific Selection Pressures Plos Genetics. 5. DOI: 10.1371/Annotation/06105Fdb-F0Fa-4Fe2-88D0-Db9F6036509F |
0.516 |
|
2008 |
Blekhman R, Oshlack A, Chabot AE, Smyth GK, Gilad Y. Gene regulation in primates evolves under tissue-specific selection pressures. Plos Genetics. 4: e1000271. PMID 19023414 DOI: 10.1371/Journal.Pgen.1000271 |
0.614 |
|
2008 |
Gaffney DJ, Blekhman R, Majewski J. Selective constraints in experimentally defined primate regulatory regions. Plos Genetics. 4: e1000157. PMID 18704158 DOI: 10.1371/Journal.Pgen.1000157 |
0.383 |
|
2008 |
Blekhman R, Man O, Herrmann L, Boyko AR, Indap A, Kosiol C, Bustamante CD, Teshima KM, Przeworski M. Natural selection on genes that underlie human disease susceptibility. Current Biology : Cb. 18: 883-9. PMID 18571414 DOI: 10.1016/J.Cub.2008.04.074 |
0.338 |
|
2008 |
Reinius B, Saetre P, Leonard JA, Blekhman R, Merino-Martinez R, Gilad Y, Jazin E. An evolutionarily conserved sexual signature in the primate brain. Plos Genetics. 4: e1000100. PMID 18566661 DOI: 10.1371/Journal.Pgen.1000100 |
0.574 |
|
2008 |
de Candia P, Blekhman R, Chabot AE, Oshlack A, Gilad Y. A combination of genomic approaches reveals the role of FOXO1a in regulating an oxidative stress response pathway. Plos One. 3: e1670. PMID 18301748 DOI: 10.1371/Journal.Pone.0001670 |
0.602 |
|
2008 |
Elkon R, Vesterman R, Amit N, Ulitsky I, Zohar I, Weisz M, Mass G, Orlev N, Sternberg G, Blekhman R, Assa J, Shiloh Y, Shamir R. SPIKE--a database, visualization and analysis tool of cellular signaling pathways. Bmc Bioinformatics. 9: 110. PMID 18289391 DOI: 10.1186/1471-2105-9-110 |
0.309 |
|
2007 |
Chabot A, Shrit RA, Blekhman R, Gilad Y. Using reporter gene assays to identify cis regulatory differences between humans and chimpanzees. Genetics. 176: 2069-76. PMID 17565944 DOI: 10.1534/Genetics.107.073429 |
0.614 |
|
2006 |
Dagan T, Blekhman R, Graur D. The "domino theory" of gene death: gradual and mass gene extinction events in three lineages of obligate symbiotic bacterial pathogens. Molecular Biology and Evolution. 23: 310-6. PMID 16237210 DOI: 10.1093/Molbev/Msj036 |
0.353 |
|
Low-probability matches (unlikely to be authored by this person) |
2015 |
Burns MB, Lynch J, Starr TK, Knights D, Blekhman R. Virulence genes are a signature of the microbiome in the colorectal tumor microenvironment. Genome Medicine. 7: 55. PMID 26170900 DOI: 10.1186/S13073-015-0177-8 |
0.299 |
|
2019 |
Grieneisen LE, Charpentier MJE, Alberts SC, Blekhman R, Bradburd G, Tung J, Archie EA. Genes, geology and germs: gut microbiota across a primate hybrid zone are explained by site soil properties, not host species. Proceedings. Biological Sciences. 286: 20190431. PMID 31014219 DOI: 10.1098/Rspb.2019.0431 |
0.298 |
|
2018 |
Hale VL, Jeraldo P, Chen J, Mundy M, Yao J, Priya S, Keeney G, Lyke K, Ridlon J, White BA, French AJ, Thibodeau SN, Diener C, Resendis-Antonio O, Gransee J, ... ... Blekhman R, et al. Distinct microbes, metabolites, and ecologies define the microbiome in deficient and proficient mismatch repair colorectal cancers. Genome Medicine. 10: 78. PMID 30376889 DOI: 10.1186/S13073-018-0586-6 |
0.292 |
|
2019 |
Richards AL, Muehlbauer AL, Alazizi A, Burns MB, Findley A, Messina F, Gould TJ, Cascardo C, Pique-Regi R, Blekhman R, Luca F. Gut Microbiota Has a Widespread and Modifiable Effect on Host Gene Regulation. Msystems. 4. PMID 31481602 DOI: 10.1128/mSystems.00323-18 |
0.291 |
|
2018 |
Burns MB, Blekhman R. Integrating tumor genomics into studies of the microbiome in colorectal cancer. Gut Microbes. 1-6. PMID 30556775 DOI: 10.1080/19490976.2018.1549421 |
0.289 |
|
2015 |
Tung J, Barreiro LB, Burns MB, Grenier JC, Lynch J, Grieneisen LE, Altmann J, Alberts SC, Blekhman R, Archie EA. Social networks predict gut microbiome composition in wild baboons. Elife. 4. PMID 25774601 DOI: 10.7554/Elife.05224 |
0.287 |
|
2018 |
Burns MB, Montassier E, Abrahante J, Priya S, Niccum DE, Khoruts A, Starr TK, Knights D, Blekhman R. Colorectal cancer mutational profiles correlate with defined microbial communities in the tumor microenvironment. Plos Genetics. 14: e1007376. PMID 29924794 DOI: 10.1371/Journal.Pgen.1007376 |
0.28 |
|
2019 |
Mangul S, Martin LS, Eskin E, Blekhman R. Improving the usability and archival stability of bioinformatics software. Genome Biology. 20: 47. PMID 30813962 DOI: 10.1186/S13059-019-1649-8 |
0.275 |
|
2018 |
Clark CR, Maile M, Blaney P, Hellweg SR, Strauss A, Durose W, Priya S, Habicht J, Burns MB, Blekhman R, Abrahante JE, Starr TK. Transposon mutagenesis screen in mice identifies TM9SF2 as a novel colorectal cancer oncogene. Scientific Reports. 8: 15327. PMID 30333512 DOI: 10.1038/S41598-018-33527-3 |
0.274 |
|
2016 |
Richards AL, Burns MB, Alazizi A, Barreiro LB, Pique-Regi R, Blekhman R, Luca F. Genetic and transcriptional analysis of human host response to healthy gut microbiota. Msystems. 1. PMID 27709125 DOI: 10.1128/mSystems.00067-16 |
0.27 |
|
2019 |
Gomez A, Sharma AK, Mallott EK, Petrzelkova KJ, Jost Robinson CA, Yeoman CJ, Carbonero F, Pafco B, Rothman JM, Ulanov A, Vlckova K, Amato KR, Schnorr SL, Dominy NJ, Modry D, ... ... Blekhman R, et al. Plasticity in the Human Gut Microbiome Defies Evolutionary Constraints. Msphere. 4. PMID 31366708 DOI: 10.1128/mSphere.00271-19 |
0.268 |
|
2021 |
Muehlbauer AL, Richards AL, Alazizi A, Burns MB, Gomez A, Clayton JB, Petrzelkova K, Cascardo C, Resztak J, Wen X, Pique-Regi R, Luca F, Blekhman R. Interspecies variation in hominid gut microbiota controls host gene regulation. Cell Reports. 37: 110057. PMID 34818542 DOI: 10.1016/j.celrep.2021.110057 |
0.266 |
|
2022 |
Suzuki TA, Fitzstevens JL, Schmidt VT, Enav H, Huus KE, Mbong Ngwese M, Grießhammer A, Pfleiderer A, Adegbite BR, Zinsou JF, Esen M, Velavan TP, Adegnika AA, Song LH, Spector TD, ... ... Blekhman R, et al. Codiversification of gut microbiota with humans. Science (New York, N.Y.). 377: 1328-1332. PMID 36108023 DOI: 10.1126/science.abm7759 |
0.259 |
|
2016 |
Gomez A, Rothman JM, Petrzelkova K, Yeoman CJ, Vlckova K, Umaña JD, Carr M, Modry D, Todd A, Torralba M, Nelson KE, Stumpf RM, Wilson BA, Blekhman R, White BA, et al. Temporal variation selects for diet-microbe co-metabolic traits in the gut of Gorilla spp. The Isme Journal. 10: 532. PMID 26784513 DOI: 10.1038/Ismej.2015.252 |
0.25 |
|
2020 |
Abdill RJ, Adamowicz EM, Blekhman R. Author response: International authorship and collaboration across bioRxiv preprints Elife. DOI: 10.7554/Elife.58496.Sa2 |
0.239 |
|
2020 |
Sharma AK, Petrzelkova K, Pafco B, Jost Robinson CA, Fuh T, Wilson BA, Stumpf RM, Torralba MG, Blekhman R, White B, Nelson KE, Leigh SR, Gomez A. Traditional Human Populations and Nonhuman Primates Show Parallel Gut Microbiome Adaptations to Analogous Ecological Conditions. Msystems. 5. PMID 33361321 DOI: 10.1128/mSystems.00815-20 |
0.239 |
|
2018 |
Grieneisen LE, Blekhman R. Crowdsourcing Our National Gut. Msystems. 3. PMID 29795799 DOI: 10.1128/mSystems.00060-18 |
0.239 |
|
2015 |
Tung J, Barreiro LB, Burns MB, Grenier J, Lynch J, Grieneisen LE, Altmann J, Alberts SC, Blekhman R, Archie EA. Author response: Social networks predict gut microbiome composition in wild baboons Elife. DOI: 10.7554/Elife.05224.023 |
0.227 |
|
2021 |
Danko D, Bezdan D, Afshin EE, Ahsanuddin S, Bhattacharya C, Butler DJ, Chng KR, Donnellan D, Hecht J, Jackson K, Kuchin K, Karasikov M, Lyons A, Mak L, Meleshko D, ... ... Blekhman R, et al. A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell. PMID 34043940 DOI: 10.1016/j.cell.2021.05.002 |
0.226 |
|
2021 |
Grieneisen L, Dasari M, Gould TJ, Björk JR, Grenier JC, Yotova V, Jansen D, Gottel N, Gordon JB, Learn NH, Gesquiere LR, Wango TL, Mututua RS, Warutere JK, Siodi L, ... ... Blekhman R, et al. Gut microbiome heritability is nearly universal but environmentally contingent. Science (New York, N.Y.). 373: 181-186. PMID 34244407 DOI: 10.1126/science.aba5483 |
0.22 |
|
2021 |
Grieneisen L, Dasari M, Gould TJ, Björk JR, Grenier JC, Yotova V, Jansen D, Gottel N, Gordon JB, Learn NH, Gesquiere LR, Wango TL, Mututua RS, Warutere JK, Siodi L, ... ... Blekhman R, et al. Gut microbiome heritability is nearly universal but environmentally contingent. Science (New York, N.Y.). 373: 181-186. PMID 34244407 DOI: 10.1126/science.aba5483 |
0.22 |
|
2019 |
Abdill RJ, Blekhman R. Author response: Tracking the popularity and outcomes of all bioRxiv preprints Elife. DOI: 10.7554/Elife.45133.054 |
0.216 |
|
2022 |
Priya S, Burns MB, Ward T, Mars RAT, Adamowicz B, Lock EF, Kashyap PC, Knights D, Blekhman R. Identification of shared and disease-specific host gene-microbiome associations across human diseases using multi-omic integration. Nature Microbiology. PMID 35577971 DOI: 10.1038/s41564-022-01121-z |
0.212 |
|
2023 |
Roche KE, Bjork JR, Dasari MR, Grieneisen L, Jansen DAWAM, Gould TJ, Gesquiere LR, Barreiro LB, Alberts SC, Blekhman R, Gilbert JA, Tung J, Mukherjee S, Archie EA. Universal gut microbial relationships in the gut microbiome of wild baboons. Elife. 12. PMID 37158607 DOI: 10.7554/eLife.83152 |
0.211 |
|
2022 |
Björk JR, Dasari MR, Roche K, Grieneisen L, Gould TJ, Grenier JC, Yotova V, Gottel N, Jansen D, Gesquiere LR, Gordon JB, Learn NH, Wango TL, Mututua RS, Kinyua Warutere J, ... ... Blekhman R, et al. Synchrony and idiosyncrasy in the gut microbiome of wild baboons. Nature Ecology & Evolution. PMID 35654895 DOI: 10.1038/s41559-022-01773-4 |
0.211 |
|
2023 |
Veseli I, Chen YT, Schechter MS, Vanni C, Fogarty EC, Watson AR, Jabri B, Blekhman R, Willis AD, Yu MK, Fernàndez-Guerra A, Füssel J, Eren AM. Microbes with higher metabolic independence are enriched in human gut microbiomes under stress. Biorxiv : the Preprint Server For Biology. PMID 37293035 DOI: 10.1101/2023.05.10.540289 |
0.208 |
|
2024 |
Chetty A, Blekhman R. Multi-omic approaches for host-microbiome data integration. Gut Microbes. 16: 2297860. PMID 38166610 DOI: 10.1080/19490976.2023.2297860 |
0.202 |
|
2019 |
Abdill RJ, Blekhman R. Tracking the popularity and outcomes of all bioRxiv preprints F1000research. 8. DOI: 10.7490/F1000Research.1116822.1 |
0.198 |
|
2021 |
Bramble MS, Vashist N, Ko A, Priya S, Musasa C, Mathieu A, Spencer A, Lupamba Kasendue M, Mamona Dilufwasayo P, Karume K, Nsibu J, Manya H, Uy MNA, Colwell B, Boivin M, ... ... Blekhman R, et al. The gut microbiome in konzo. Nature Communications. 12: 5371. PMID 34508085 DOI: 10.1038/s41467-021-25694-1 |
0.173 |
|
2023 |
Grieneisen L, Blekhman R, Archie E. How longitudinal data can contribute to our understanding of host genetic effects on the gut microbiome. Gut Microbes. 15: 2178797. PMID 36794811 DOI: 10.1080/19490976.2023.2178797 |
0.166 |
|
2021 |
Mihindukulasuriya KA, Mars RAT, Johnson AJ, Ward T, Priya S, Lekatz HR, Kalari KR, Droit L, Zheng T, Blekhman R, D'Amato M, Farrugia G, Knights D, Handley SA, Kashyap PC. Multi-omics analyses show disease, diet, and transcriptome interactions with the virome. Gastroenterology. PMID 34245762 DOI: 10.1053/j.gastro.2021.06.077 |
0.162 |
|
2021 |
Mihindukulasuriya KA, Mars RAT, Johnson AJ, Ward T, Priya S, Lekatz HR, Kalari KR, Droit L, Zheng T, Blekhman R, D'Amato M, Farrugia G, Knights D, Handley SA, Kashyap PC. Multi-omics analyses show disease, diet, and transcriptome interactions with the virome. Gastroenterology. PMID 34245762 DOI: 10.1053/j.gastro.2021.06.077 |
0.162 |
|
2019 |
Abernathy B, Blekhman R, Schoenfuss T, Gallaher D. Changes in the Gut Microbiome Contribute to Changes in Tissue Gene Expression in Rats Fed Prebiotic Dietary Fibers (P15-022-19). Current Developments in Nutrition. 3. PMID 31225139 DOI: 10.1093/cdn/nzz037.P15-022-19 |
0.159 |
|
2023 |
Johnson KE, Heisel T, Allert M, Fürst A, Yerabandi N, Knights D, Jacobs KM, Lock EF, Bode L, Fields DA, Rudolph MC, Gale CA, Albert FW, Demerath EW, Blekhman R. Human milk variation is shaped by maternal genetics and impacts the infant gut microbiome. Biorxiv : the Preprint Server For Biology. PMID 36747843 DOI: 10.1101/2023.01.24.525211 |
0.152 |
|
2018 |
Yuan C, Burns MB, Subramanian S, Blekhman R. Interaction between Host MicroRNAs and the Gut Microbiota in Colorectal Cancer. Msystems. 3. PMID 29795787 DOI: 10.1128/mSystems.00205-17 |
0.115 |
|
2018 |
Grieneisen LE, Blekhman R. Erratum for Grieneisen and Blekhman, "Crowdsourcing Our National Gut". Msystems. 3. PMID 30003142 DOI: 10.1128/mSystems.00114-18 |
0.095 |
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2024 |
Allert M, Ferretti P, Johnson KE, Heisel T, Gonia S, Knights D, Fields DA, Albert FW, Demerath EW, Gale CA, Blekhman R. Assembly, stability, and dynamics of the infant gut microbiome are linked to bacterial strains and functions in mother's milk. Biorxiv : the Preprint Server For Biology. PMID 38328166 DOI: 10.1101/2024.01.28.577594 |
0.094 |
|
2021 |
Gomez A, Sharma AK, Mallott EK, Petrzelkova KJ, Jost Robinson CA, Yeoman CJ, Carbonero F, Pafco B, Rothman JM, Ulanov A, Vlckova K, Amato KR, Schnorr SL, Dominy NJ, Modry D, ... ... Blekhman R, et al. Erratum for Gomez et al., "Plasticity in the Human Gut Microbiome Defies Evolutionary Constraints". Msphere. 6. PMID 33731474 DOI: 10.1128/mSphere.00168-21 |
0.086 |
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2023 |
Johnson KE, Heisel T, Fields DA, Isganaitis E, Jacobs KM, Knights D, Lock EF, Rudolph MC, Gale CA, Schleiss MR, Albert FW, Demerath EW, Blekhman R. Human Cytomegalovirus in breast milk is associated with milk composition, the infant gut microbiome, and infant growth. Biorxiv : the Preprint Server For Biology. PMID 37503212 DOI: 10.1101/2023.07.19.549370 |
0.077 |
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2020 |
Mars RAT, Yang Y, Ward T, Houtti M, Priya S, Lekatz HR, Tang X, Sun Z, Kalari KR, Korem T, Bhattarai Y, Zheng T, Bar N, Frost G, Johnson AJ, ... ... Blekhman R, et al. Longitudinal Multi-omics Reveals Subset-Specific Mechanisms Underlying Irritable Bowel Syndrome. Cell. 183: 1137-1140. PMID 33186523 DOI: 10.1016/j.cell.2020.10.040 |
0.049 |
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