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Andrew W. Grimson, Ph.D. - Publications

Affiliations: 
2004 University of Wisconsin, Madison, Madison, WI 
Area:
C. Elegans
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32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Carro MLM, Grimson A, Cohen PE. Small RNAs and their protein partners in animal meiosis. Current Topics in Developmental Biology. 151: 245-279. PMID 36681472 DOI: 10.1016/bs.ctdb.2022.06.001  0.304
2022 Kwak Y, Daly CWP, Fogarty EA, Grimson A, Kwak H. Dynamic and Widespread Control of Poly(A) Tail Length during Macrophage Activation. Rna (New York, N.Y.). PMID 35512831 DOI: 10.1261/rna.078918.121  0.316
2020 Patel RK, West JD, Jiang Y, Fogarty EA, Grimson A. Robust partitioning of microRNA targets from downstream regulatory changes. Nucleic Acids Research. PMID 32821933 DOI: 10.1093/Nar/Gkaa687  0.345
2020 Simkin A, Geissler R, McIntyre ABR, Grimson A. Evolutionary dynamics of microRNA target sites across vertebrate evolution. Plos Genetics. 16: e1008285. PMID 32012152 DOI: 10.1371/Journal.Pgen.1008285  0.334
2019 Singh P, Patel RK, Palmer N, Grenier JK, Paduch D, Kaldis P, Grimson A, Schimenti JC. CDK2 kinase activity is a regulator of male germ cell fate. Development (Cambridge, England). PMID 31582414 DOI: 10.1242/Dev.180273  0.373
2019 Grive KJ, Hu Y, Shu E, Grimson A, Elemento O, Grenier JK, Cohen PE. Dynamic transcriptome profiles within spermatogonial and spermatocyte populations during postnatal testis maturation revealed by single-cell sequencing. Plos Genetics. 15: e1007810. PMID 30893341 DOI: 10.1371/Journal.Pgen.1007810  0.327
2018 Geissler R, Grimson A. Characterizing mRNA Sequence Motifs in the 3'-UTR Using GFP Reporter Constructs. Methods of Molecular Biology. 1720: 77-88. PMID 29236252 DOI: 10.1007/978-1-4939-7540-2_6  0.363
2016 Guo Y, Alexander K, Clark AG, Grimson A, Yu H. Integrated network analysis reveals distinct regulatory roles of transcription factors and microRNAs. Rna (New York, N.Y.). PMID 27604961 DOI: 10.1261/Rna.048025.114  0.413
2016 Hilz S, Modzelewski AJ, Cohen PE, Grimson A. The roles of microRNAs and siRNAs in mammalian spermatogenesis. Development (Cambridge, England). 143: 3061-73. PMID 27578177 DOI: 10.1242/Dev.136721  0.37
2016 Geissler R, Grimson A. A position-specific 3′UTR sequence that accelerates mRNA decay Rna Biology. 13: 1075-1077. PMID 27565004 DOI: 10.1080/15476286.2016.1225645  0.473
2016 Geissler R, Simkin A, Floss D, Patel R, Fogarty EA, Scheller J, Grimson A. A widespread sequence-specific mRNA decay pathway mediated by hnRNPs A1 and A2/B1. Genes & Development. 30: 1070-85. PMID 27151978 DOI: 10.1101/Gad.277392.116  0.423
2016 Wissink EM, Fogarty EA, Grimson A. High-throughput discovery of post-transcriptional cis-regulatory elements. Bmc Genomics. 17: 177. PMID 26941072 DOI: 10.1186/S12864-016-2479-7  0.35
2016 Vo TV, Das J, Meyer MJ, Cordero NA, Akturk N, Wei X, Fair BJ, Degatano AG, Fragoza R, Liu LG, Matsuyama A, Trickey M, Horibata S, Grimson A, Yamano H, et al. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Cell. 164: 310-323. PMID 26771498 DOI: 10.1016/J.Cell.2015.11.037  0.387
2015 Wissink EM, Smith NL, Spektor R, Rudd BD, Grimson A. MicroRNAs and Their Targets Are Differentially Regulated in Adult and Neonatal Mouse CD8+ T Cells. Genetics. 201: 1017-30. PMID 26416483 DOI: 10.1534/Genetics.115.179176  0.315
2015 Stepankiw N, Raghavan M, Fogarty EA, Grimson A, Pleiss JA. Widespread alternative and aberrant splicing revealed by lariat sequencing. Nucleic Acids Research. 43: 8488-501. PMID 26261211 DOI: 10.1093/Nar/Gkv763  0.366
2015 Guda S, Brendel C, Renella R, Du P, Bauer DE, Canver MC, Grenier JK, Grimson AW, Kamran SC, Thornton J, de Boer H, Root DE, Milsom MD, Orkin SH, Gregory RI, et al. miRNA-embedded shRNAs for Lineage-specific BCL11A Knockdown and Hemoglobin F Induction. Molecular Therapy : the Journal of the American Society of Gene Therapy. 23: 1465-74. PMID 26080908 DOI: 10.1038/Mt.2015.113  0.396
2015 Kristjánsdóttir K, Fogarty EA, Grimson A. Systematic analysis of the Hmga2 3' UTR identifies many independent regulatory sequences and a novel interaction between distal sites. Rna (New York, N.Y.). 21: 1346-60. PMID 25999317 DOI: 10.1261/Rna.051177.115  0.442
2015 Modzelewski AJ, Hilz S, Crate EA, Schweidenback CT, Fogarty EA, Grenier JK, Freire R, Cohen PE, Grimson A. Dgcr8 and Dicer are essential for sex chromosome integrity during meiosis in males. Journal of Cell Science. 128: 2314-27. PMID 25934699 DOI: 10.1242/Dev.127498  0.409
2015 Grimson A. Noncoding RNA: linking microRNAs to their targets. Nature Chemical Biology. 11: 100-101. PMID 25602729 DOI: 10.1038/Nchembio.1741  0.34
2013 Guo Y, Wei X, Das J, Grimson A, Lipkin SM, Clark AG, Yu H. Dissecting disease inheritance modes in a three-dimensional protein network challenges the "guilt-by-association" principle. American Journal of Human Genetics. 93: 78-89. PMID 23791107 DOI: 10.1016/J.Ajhg.2013.05.022  0.305
2012 Modzelewski AJ, Holmes RJ, Hilz S, Grimson A, Cohen PE. AGO4 regulates entry into meiosis and influences silencing of sex chromosomes in the male mouse germline. Developmental Cell. 23: 251-64. PMID 22863743 DOI: 10.1016/J.Devcel.2012.07.003  0.357
2011 Garcia DM, Baek D, Shin C, Bell GW, Grimson A, Bartel DP. Weak seed-pairing stability and high target-site abundance decrease the proficiency of lsy-6 and other microRNAs. Nature Structural & Molecular Biology. 18: 1139-46. PMID 21909094 DOI: 10.1038/Nsmb.2115  0.34
2008 Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP. Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals. Nature. 455: 1193-7. PMID 18830242 DOI: 10.1038/Nature07415  0.369
2007 Grimson A, Farh KK, Johnston WK, Garrett-Engele P, Lim LP, Bartel DP. MicroRNA targeting specificity in mammals: determinants beyond seed pairing. Molecular Cell. 27: 91-105. PMID 17612493 DOI: 10.1016/J.Molcel.2007.06.017  0.342
2007 Johns L, Grimson A, Kuchma SL, Newman CL, Anderson P. Caenorhabditis elegans SMG-2 selectively marks mRNAs containing premature translation termination codons. Molecular and Cellular Biology. 27: 5630-8. PMID 17562857 DOI: 10.1128/Mcb.00410-07  0.705
2006 Squirrell JM, Eggers ZT, Luedke N, Saari B, Grimson A, Lyons GE, Anderson P, White JG. CAR-1, a protein that localizes with the mRNA decapping component DCAP-1, is required for cytokinesis and ER organization in Caenorhabditis elegans embryos. Molecular Biology of the Cell. 17: 336-44. PMID 16267265 DOI: 10.1091/Mbc.E05-09-0874  0.659
2005 Farh KK, Grimson A, Jan C, Lewis BP, Johnston WK, Lim LP, Burge CB, Bartel DP. The widespread impact of mammalian MicroRNAs on mRNA repression and evolution. Science (New York, N.Y.). 310: 1817-21. PMID 16308420 DOI: 10.1126/Science.1121158  0.366
2005 Lim LP, Lau NC, Garrett-Engele P, Grimson A, Schelter JM, Castle J, Bartel DP, Linsley PS, Johnson JM. Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs. Nature. 433: 769-73. PMID 15685193 DOI: 10.1038/Nature03315  0.361
2004 Grimson A, O'Connor S, Newman CL, Anderson P. SMG-1 is a phosphatidylinositol kinase-related protein kinase required for nonsense-mediated mRNA Decay in Caenorhabditis elegans. Molecular and Cellular Biology. 24: 7483-90. PMID 15314158 DOI: 10.1128/Mcb.24.17.7483-7490.2004  0.665
2003 Ohnishi T, Yamashita A, Kashima I, Schell T, Anders KR, Grimson A, Hachiya T, Hentze MW, Anderson P, Ohno S. Phosphorylation of hUPF1 induces formation of mRNA surveillance complexes containing hSMG-5 and hSMG-7. Molecular Cell. 12: 1187-200. PMID 14636577 DOI: 10.1016/S1097-2765(03)00443-X  0.675
2003 Anders KR, Grimson A, Anderson P. SMG-5, required for C.elegans nonsense-mediated mRNA decay, associates with SMG-2 and protein phosphatase 2A. The Embo Journal. 22: 641-50. PMID 12554664 DOI: 10.1093/Emboj/Cdg056  0.68
1999 Page MF, Carr B, Anders KR, Grimson A, Anderson P. SMG-2 is a phosphorylated protein required for mRNA surveillance in Caenorhabditis elegans and related to Upf1p of yeast. Molecular and Cellular Biology. 19: 5943-51. PMID 10454541 DOI: 10.1128/Mcb.19.9.5943  0.681
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