David Parichy - Publications

Affiliations: 
University of Washington, Seattle, Seattle, WA 

66 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Patterson LB, Parichy DM. Zebrafish Pigment Pattern Formation: Insights into the Development and Evolution of Adult Form. Annual Review of Genetics. PMID 31509458 DOI: 10.1146/annurev-genet-112618-043741  1
2019 Lewis VM, Saunders LM, Larson TA, Bain EJ, Sturiale SL, Gur D, Chowdhury S, Flynn JD, Allen MC, Deheyn DD, Lee JC, Simon JA, Lippincott-Schwartz J, Raible DW, Parichy DM. Fate plasticity and reprogramming in genetically distinct populations of leucophores. Proceedings of the National Academy of Sciences of the United States of America. PMID 31138706 DOI: 10.1073/pnas.1901021116  0.68
2018 Spiewak JE, Bain EJ, Liu J, Kou K, Sturiale SL, Patterson LB, Diba P, Eisen JS, Braasch I, Ganz J, Parichy DM. Evolution of Endothelin signaling and diversification of adult pigment pattern in Danio fishes. Plos Genetics. 14: e1007538. PMID 30226839 DOI: 10.1371/journal.pgen.1007538  1
2018 Patterson LB, Parichy DM. Melanophores Tune Out the Noise to Make Stripes. Developmental Cell. 45: 544-545. PMID 29870715 DOI: 10.1016/j.devcel.2018.05.014  1
2017 Hur M, Gistelinck CA, Huber P, Lee J, Thompson MH, Monstad-Rios AT, Watson CJ, McMenamin SK, Willaert A, Parichy DM, Coucke P, Kwon RY. MicroCT-Based Phenomics in the Zebrafish Skeleton Reveals Virtues of Deep Phenotyping in a Distributed Organ System. Zebrafish. PMID 29173118 DOI: 10.1089/zeb.2017.1540  0.92
2017 Hur M, Gistelinck CA, Huber P, Lee J, Thompson MH, Monstad-Rios AT, Watson CJ, McMenamin SK, Willaert A, Parichy DM, Coucke P, Kwon RY. microCT-based phenomics in the zebrafish skeleton reveals virtues of deep phenotyping in a distributed organ system. Elife. 6. PMID 28884682 DOI: 10.7554/eLife.26014  0.92
2017 Eom DS, Parichy DM. A macrophage relay for long-distance signaling during postembryonic tissue remodeling. Science (New York, N.Y.). PMID 28209639 DOI: 10.1126/science.aal2745  0.52
2016 Parichy DM. The gar is a fish... is a bird... is a mammal? Nature Genetics. 48: 344-5. PMID 27023772 DOI: 10.1038/ng.3532  1
2016 McMenamin SK, Chandless MN, Parichy DM. Working with zebrafish at postembryonic stages Methods in Cell Biology. DOI: 10.1016/bs.mcb.2015.12.001  1
2015 Eom DS, Bain EJ, Patterson LB, Grout ME, Parichy DM. Long-distance communication by specialized cellular projections during pigment pattern development and evolution. Elife. 4. PMID 26701906 DOI: 10.7554/eLife.12401  1
2015 Parichy DM, Spiewak JE. Origins of adult pigmentation: diversity in pigment stem cell lineages and implications for pattern evolution. Pigment Cell & Melanoma Research. 28: 31-50. PMID 25421288 DOI: 10.1111/pcmr.12332  1
2015 Parichy DM. The natural history of model organisms: Advancing biology through a deeper understanding of zebrafish ecology and evolution Elife. 2015. DOI: 10.7554/eLife.05635.001  1
2014 Patterson LB, Bain EJ, Parichy DM. Pigment cell interactions and differential xanthophore recruitment underlying zebrafish stripe reiteration and Danio pattern evolution. Nature Communications. 5: 5299. PMID 25374113 DOI: 10.1038/ncomms6299  1
2014 McMenamin SK, Bain EJ, McCann AE, Patterson LB, Eom DS, Waller ZP, Hamill JC, Kuhlman JA, Eisen JS, Parichy DM. Thyroid hormone-dependent adult pigment cell lineage and pattern in zebrafish. Science (New York, N.Y.). 345: 1358-61. PMID 25170046 DOI: 10.1126/science.1256251  1
2014 Inoue S, Kondo S, Parichy DM, Watanabe M. Tetraspanin 3c requirement for pigment cell interactions and boundary formation in zebrafish adult pigment stripes. Pigment Cell & Melanoma Research. 27: 190-200. PMID 24734316 DOI: 10.1111/pcmr.12192  1
2014 Hamada H, Watanabe M, Lau HE, Nishida T, Hasegawa T, Parichy DM, Kondo S. Involvement of Delta/Notch signaling in zebrafish adult pigment stripe patterning. Development (Cambridge, England). 141: 318-24. PMID 24306107 DOI: 10.1242/dev.099804  1
2013 Patterson LB, Parichy DM. Interactions with iridophores and the tissue environment required for patterning melanophores and xanthophores during zebrafish adult pigment stripe formation. Plos Genetics. 9: e1003561. PMID 23737760 DOI: 10.1371/journal.pgen.1003561  1
2013 McMenamin SK, Minchin JE, Gordon TN, Rawls JF, Parichy DM. Dwarfism and increased adiposity in the gh1 mutant zebrafish vizzini. Endocrinology. 154: 1476-87. PMID 23456361 DOI: 10.1210/en.2012-1734  1
2013 McMenamin SK, Parichy DM. Metamorphosis in teleosts. Current Topics in Developmental Biology. 103: 127-65. PMID 23347518 DOI: 10.1016/B978-0-12-385979-2.00005-8  1
2012 Eom DS, Inoue S, Patterson LB, Gordon TN, Slingwine R, Kondo S, Watanabe M, Parichy DM. Melanophore migration and survival during zebrafish adult pigment stripe development require the immunoglobulin superfamily adhesion molecule Igsf11. Plos Genetics. 8: e1002899. PMID 22916035 DOI: 10.1371/journal.pgen.1002899  1
2011 Budi EH, Patterson LB, Parichy DM. Post-embryonic nerve-associated precursors to adult pigment cells: genetic requirements and dynamics of morphogenesis and differentiation. Plos Genetics. 7: e1002044. PMID 21625562 DOI: 10.1371/journal.pgen.1002044  1
2011 Roeselers G, Mittge EK, Stephens WZ, Parichy DM, Cavanaugh CM, Guillemin K, Rawls JF. Evidence for a core gut microbiota in the zebrafish. The Isme Journal. 5: 1595-608. PMID 21472014 DOI: 10.1038/ismej.2011.38  1
2010 Elizondo MR, Budi EH, Parichy DM. trpm7 regulation of in vivo cation homeostasis and kidney function involves stanniocalcin 1 and fgf23. Endocrinology. 151: 5700-9. PMID 20881241 DOI: 10.1210/en.2010-0853  1
2010 Larson TA, Gordon TN, Lau HE, Parichy DM. Defective adult oligodendrocyte and Schwann cell development, pigment pattern, and craniofacial morphology in puma mutant zebrafish having an alpha tubulin mutation. Developmental Biology. 346: 296-309. PMID 20692250 DOI: 10.1016/j.ydbio.2010.07.035  1
2010 Curran K, Lister JA, Kunkel GR, Prendergast A, Parichy DM, Raible DW. Interplay between Foxd3 and Mitf regulates cell fate plasticity in the zebrafish neural crest. Developmental Biology. 344: 107-18. PMID 20460180 DOI: 10.1016/j.ydbio.2010.04.023  1
2009 Christiansen HE, Lang MR, Pace JM, Parichy DM. Critical early roles for col27a1a and col27a1b in zebrafish notochord morphogenesis, vertebral mineralization and post-embryonic axial growth. Plos One. 4: e8481. PMID 20041163 DOI: 10.1371/journal.pone.0008481  1
2009 Lang MR, Patterson LB, Gordon TN, Johnson SL, Parichy DM. Basonuclin-2 requirements for zebrafish adult pigment pattern development and female fertility. Plos Genetics. 5: e1000744. PMID 19956727 DOI: 10.1371/journal.pgen.1000744  1
2009 Parichy DM, Elizondo MR, Mills MG, Gordon TN, Engeszer RE. Normal table of postembryonic zebrafish development: staging by externally visible anatomy of the living fish. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 238: 2975-3015. PMID 19891001 DOI: 10.1002/dvdy.22113  1
2009 Hultman KA, Budi EH, Teasley DC, Gottlieb AY, Parichy DM, Johnson SL. Defects in ErbB-dependent establishment of adult melanocyte stem cells reveal independent origins for embryonic and regeneration melanocytes. Plos Genetics. 5: e1000544. PMID 19578401 DOI: 10.1371/journal.pgen.1000544  1
2009 Parichy DM. Animal pigment pattern: an integrative model system for studying the development, evolution, and regeneration of form. Seminars in Cell & Developmental Biology. 20: 63-4. PMID 19146966 DOI: 10.1016/j.semcdb.2008.12.010  1
2008 Ekker SC, Parichy DM, Cheng KC. Research implications of pigment biology in zebrafish. Zebrafish. 5: 233-5. PMID 19133820 DOI: 10.1089/zeb.2008.9981  1
2008 Budi EH, Patterson LB, Parichy DM. Embryonic requirements for ErbB signaling in neural crest development and adult pigment pattern formation. Development (Cambridge, England). 135: 2603-14. PMID 18508863 DOI: 10.1242/dev.019299  1
2008 Engeszer RE, Wang G, Ryan MJ, Parichy DM. Sex-specific perceptual spaces for a vertebrate basal social aggregative behavior. Proceedings of the National Academy of Sciences of the United States of America. 105: 929-33. PMID 18199839 DOI: 10.1073/pnas.0708778105  1
2007 Engeszer RE, Barbiano LA, Ryan MJ, Parichy DM. Timing and plasticity of shoaling behaviour in the zebrafish, Danio rerio. Animal Behaviour. 74: 1269-1275. PMID 18978932 DOI: 10.1016/j.anbehav.2007.01.032  1
2007 Engeszer RE, Patterson LB, Rao AA, Parichy DM. Zebrafish in the wild: a review of natural history and new notes from the field. Zebrafish. 4: 21-40. PMID 18041940 DOI: 10.1089/zeb.2006.9997  1
2007 Mills MG, Nuckels RJ, Parichy DM. Deconstructing evolution of adult phenotypes: genetic analyses of kit reveal homology and evolutionary novelty during adult pigment pattern development of Danio fishes. Development (Cambridge, England). 134: 1081-90. PMID 17287252 DOI: 10.1242/dev.02799  1
2007 Parichy DM. Homology and the evolution of novelty during Danio adult pigment pattern development. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 308: 578-90. PMID 17094081 DOI: 10.1002/jez.b.21141  1
2007 Streelman JT, Peichel CL, Parichy DM. Developmental genetics of adaptation in fishes: The case for novelty Annual Review of Ecology, Evolution, and Systematics. 38: 655-681. DOI: 10.1146/annurev.ecolsys.38.091206.095537  1
2007 Parichy DM, Reedy MV, Erickson CA. Regulation of Melanoblast Migration and Differentiation The Pigmentary System: Physiology and Pathophysiology: Second Edition. 108-139. DOI: 10.1002/9780470987100.ch5  1
2006 Parichy DM. Evolution of danio pigment pattern development. Heredity. 97: 200-10. PMID 16835593 DOI: 10.1038/sj.hdy.6800867  1
2005 Kocher TD, Jeffery WR, Parichy DM, Peichel CL, Streelman JT, Thorgaard GH. Special feature--roundtable discussion. Fish models for studying adaptive evolution and speciation. Zebrafish. 2: 147-56. PMID 18248189 DOI: 10.1089/zeb.2005.2.147  1
2005 Smith JJ, Kump DK, Walker JA, Parichy DM, Voss SR. A comprehensive expressed sequence tag linkage map for tiger salamander and Mexican axolotl: enabling gene mapping and comparative genomics in Ambystoma. Genetics. 171: 1161-71. PMID 16079226 DOI: 10.1534/genetics.105.046433  1
2005 Elizondo MR, Arduini BL, Paulsen J, MacDonald EL, Sabel JL, Henion PD, Cornell RA, Parichy DM. Defective skeletogenesis with kidney stone formation in dwarf zebrafish mutant for trpm7. Current Biology : Cb. 15: 667-71. PMID 15823540 DOI: 10.1016/j.cub.2005.02.050  1
2005 Quigley IK, Manuel JL, Roberts RA, Nuckels RJ, Herrington ER, MacDonald EL, Parichy DM. Evolutionary diversification of pigment pattern in Danio fishes: differential fms dependence and stripe loss in D. albolineatus. Development (Cambridge, England). 132: 89-104. PMID 15563521 DOI: 10.1242/dev.01547  1
2005 Parichy DM. Variation and developmental biology: Prospects for the future Variation. 475-498. DOI: 10.1016/B978-012088777-4/50022-3  1
2004 Quigley IK, Turner JM, Nuckels RJ, Manuel JL, Budi EH, MacDonald EL, Parichy DM. Pigment pattern evolution by differential deployment of neural crest and post-embryonic melanophore lineages in Danio fishes. Development (Cambridge, England). 131: 6053-69. PMID 15537688 DOI: 10.1242/dev.01526  1
2004 Putta S, Smith JJ, Walker JA, Rondet M, Weisrock DW, Monaghan J, Samuels AK, Kump K, King DC, Maness NJ, Habermann B, Tanaka E, Bryant SV, Gardiner DM, Parichy DM, et al. From biomedicine to natural history research: EST resources for ambystomatid salamanders. Bmc Genomics. 5: 54. PMID 15310388 DOI: 10.1186/1471-2164-5-54  1
2004 Engeszer RE, Ryan MJ, Parichy DM. Learned social preference in zebrafish. Current Biology : Cb. 14: 881-4. PMID 15186744 DOI: 10.1016/j.cub.2004.04.042  1
2003 Parichy DM. Pigment patterns: fish in stripes and spots. Current Biology : Cb. 13: R947-50. PMID 14680649  1
2003 Parichy DM, Turner JM. Zebrafish puma mutant decouples pigment pattern and somatic metamorphosis. Developmental Biology. 256: 242-57. PMID 12679100 DOI: 10.1016/S0012-1606(03)00015-0  1
2003 Parichy DM, Turner JM, Parker NB. Essential role for puma in development of postembryonic neural crest-derived cell lineages in zebrafish. Developmental Biology. 256: 221-41. PMID 12679099 DOI: 10.1016/S0012-1606(03)00016-2  1
2003 Parichy DM, Turner JM. Temporal and cellular requirements for Fms signaling during zebrafish adult pigment pattern development. Development (Cambridge, England). 130: 817-33. PMID 12538511 DOI: 10.1242/dev.00307  1
2002 Quigley IK, Parichy DM. Pigment pattern formation in zebrafish: a model for developmental genetics and the evolution of form. Microscopy Research and Technique. 58: 442-55. PMID 12242701 DOI: 10.1002/jemt.10162  1
2001 Parichy DM, Johnson SL. Zebrafish hybrids suggest genetic mechanisms for pigment pattern diversification in Danio. Development Genes and Evolution. 211: 319-28. PMID 11466528 DOI: 10.1007/s004270100155  1
2001 Voss SR, Smith JJ, Gardiner DM, Parichy DM. Conserved vertebrate chromosome segments in the large salamander genome. Genetics. 158: 735-46. PMID 11404337  1
2001 Parichy DM. Homology and evolutionary novelty in the deployment of extracellular matrix molecules during pigment pattern formation in the salamanders Taricha torosa and T. rivularis (Salamandridae). The Journal of Experimental Zoology. 291: 13-24. PMID 11335913 DOI: 10.1002/jez.2  1
2000 Parichy DM, Mellgren EM, Rawls JF, Lopes SS, Kelsh RN, Johnson SL. Mutational analysis of endothelin receptor b1 (rose) during neural crest and pigment pattern development in the zebrafish Danio rerio. Developmental Biology. 227: 294-306. PMID 11071756 DOI: 10.1006/dbio.2000.9899  1
2000 Parichy DM, Ransom DG, Paw B, Zon LI, Johnson SL. An orthologue of the kit-related gene fms is required for development of neural crest-derived xanthophores and a subpopulation of adult melanocytes in the zebrafish, Danio rerio. Development (Cambridge, England). 127: 3031-44. PMID 10862741  1
1999 Parichy DM, Rawls JF, Pratt SJ, Whitfield TT, Johnson SL. Zebrafish sparse corresponds to an orthologue of c-kit and is required for the morphogenesis of a subpopulation of melanocytes, but is not essential for hematopoiesis or primordial germ cell development. Development (Cambridge, England). 126: 3425-36. PMID 10393121  1
1999 Parichy DM, Stigson M, Voss SR. Genetic analysis of steel and the PG-M/versican-encoding gene AxPG as candidates for the white (d) pigmentation mutant in the salamander Ambystoma mexicanum. Development Genes and Evolution. 209: 349-56. PMID 10370116 DOI: 10.1007/s004270050263  1
1998 Parichy DM. Experimental analysis of character coupling across a complex life cycle: pigment pattern metamorphosis in the tiger salamander, Ambystoma tigrinum tigrinum. Journal of Morphology. 237: 53-67. PMID 9642792 DOI: 10.1002/(SICI)1097-4687(199807)237:1<53::AID-JMOR5>3.0.CO;2-P  1
1996 Parichy DM. Salamander pigment patterns: how can they be used to study developmental mechanisms and their evolutionary transformation? The International Journal of Developmental Biology. 40: 871-84. PMID 8877461  1
1996 Parichy DM. When neural crest and placodes collide: interactions between melanophores and the lateral lines that generate stripes in the salamander Ambystoma tigrinum tigrinum (Ambystomatidae). Developmental Biology. 175: 283-300. PMID 8626033 DOI: 10.1006/dbio.1996.0115  1
1996 Parichy DM. Pigment patterns of larval salamanders (Ambystomatidae, Salamandridae): the role of the lateral line sensory system and the evolution of pattern-forming mechanisms. Developmental Biology. 175: 265-82. PMID 8626032 DOI: 10.1006/dbio.1996.0114  1
1995 Parichy DM, Kaplan RH. Maternal investment and developmental plasticity: Functional consequences for locomotor performance of hatchling frog larvae Functional Ecology. 9: 606-617.  1
1992 Parichy DM, Kaplan RH. Maternal effects on offspring growth and development depend on environmental quality in the frog Bombina orientalis Oecologia. 91: 579-586. DOI: 10.1007/BF00650334  1
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