Mark H. Ellisman - Publications

Affiliations: 
University of California, San Diego, La Jolla, CA 
Area:
Bioinformatics, Electron Microscopy, Imaging, Microscopy, Subcellular Structure
Website:
http://cancer.ucsd.edu/summaries/mellisman.asp

264 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Mendelsohn R, Garcia GC, Bartol TM, Lee CT, Khandelwal P, Liu E, Spencer DJ, Husar A, Bushong EA, Phan S, Perkins G, Ellisman MH, Skupin A, Sejnowski TJ, Rangamani P. Morphological principles of neuronal mitochondria. The Journal of Comparative Neurology. PMID 34608995 DOI: 10.1002/cne.25254  0.605
2021 Ganguly A, Sharma R, Boyer NP, Wernert F, Phan S, Boassa D, Parra L, Das U, Caillol G, Han X, Yates JR, Ellisman MH, Leterrier C, Roy S. Clathrin packets move in slow axonal transport and deliver functional payloads to synapses. Neuron. 109: 2884-2901.e7. PMID 34534453 DOI: 10.1016/j.neuron.2021.08.016  0.671
2021 Petersen MA, Tognatta R, Meyer-Franke A, Bushong EA, Mendiola AS, Yan Z, Muthusamy A, Merlini M, Meza-Acevedo R, Cabriga B, Zhou Y, Thomas R, Ryu JK, Lassmann H, Ellisman MH, et al. BMP receptor blockade overcomes extrinsic inhibition of remyelination and restores neurovascular homeostasis. Brain : a Journal of Neurology. PMID 34426831 DOI: 10.1093/brain/awab106  0.588
2021 Nava Gonzales C, McKaughan Q, Bushong EA, Cauwenberghs K, Ng R, Madany M, Ellisman MH, Su CY. Systematic morphological and morphometric analysis of identified olfactory receptor neurons in . Elife. 10. PMID 34423777 DOI: 10.7554/eLife.69896  0.613
2021 Zhu Y, Uytiepo M, Bushong E, Haberl M, Beutter E, Scheiwe F, Zhang W, Chang L, Luu D, Chui B, Ellisman M, Maximov A. Nanoscale 3D EM reconstructions reveal intrinsic mechanisms of structural diversity of chemical synapses. Cell Reports. 35: 108953. PMID 33826888 DOI: 10.1016/j.celrep.2021.108953  0.629
2021 Ashaber M, Tomina Y, Kassraian P, Bushong EA, Kristan WB, Ellisman MH, Wagenaar DA. Anatomy and activity patterns in a multifunctional motor neuron and its surrounding circuits. Elife. 10. PMID 33587033 DOI: 10.7554/eLife.61881  0.602
2021 Steinkellner T, Madany M, Haberl MG, Zell V, Li C, Hu J, Mackey M, Ramachandra R, Adams S, Ellisman MH, Hnasko TS, Boassa D. Genetic Probe for Visualizing Glutamatergic Synapses and Vesicles by 3D Electron Microscopy. Acs Chemical Neuroscience. PMID 33522227 DOI: 10.1021/acschemneuro.0c00643  0.681
2020 Merlini M, Rafalski VA, Ma K, Kim KY, Bushong EA, Rios Coronado PE, Yan Z, Mendiola AS, Sozmen EG, Ryu JK, Haberl MG, Madany M, Sampson DN, Petersen MA, Bardehle S, ... ... Ellisman MH, et al. Microglial G-dependent dynamics regulate brain network hyperexcitability. Nature Neuroscience. PMID 33318667 DOI: 10.1038/s41593-020-00756-7  0.573
2020 Binns TC, Ayala AX, Grimm JB, Tkachuk AN, Castillon GA, Phan S, Zhang L, Brown TA, Liu Z, Adams SR, Ellisman MH, Koyama M, Lavis LD. Rational Design of Bioavailable Photosensitizers for Manipulation and Imaging of Biological Systems. Cell Chemical Biology. PMID 32698018 DOI: 10.1016/J.Chembiol.2020.07.001  0.315
2020 Cherra SJ, Goncharov A, Boassa D, Ellisman M, Jin Y. MAGU-2/Mpp5 homolog regulates epidermal phagocytosis and synapse density. Journal of Neurogenetics. 1-9. PMID 32366143 DOI: 10.1080/01677063.2020.1726915  0.691
2019 Sanculi D, Pannoni KE, Bushong EA, Crump M, Sung M, Popat V, Zaher C, Hicks E, Song A, Mofakham N, Li P, Antzoulatos EG, Fioravante D, Ellisman MH, DeBello WM. Toric spines at a site of learning. Eneuro. PMID 31822521 DOI: 10.1523/ENEURO.0197-19.2019  0.619
2019 Garcia GC, Bartol TM, Phan S, Bushong EA, Perkins G, Sejnowski TJ, Ellisman MH, Skupin A. Mitochondrial morphology provides a mechanism for energy buffering at synapses. Scientific Reports. 9: 18306. PMID 31797946 DOI: 10.1038/S41598-019-54159-1  0.632
2019 Wesseling JF, Phan S, Bushong EA, Siksou L, Marty S, Pérez-Otaño I, Ellisman M. Sparse force-bearing bridges between neighboring synaptic vesicles. Brain Structure & Function. PMID 31667576 DOI: 10.1007/S00429-019-01966-X  0.646
2019 Han Y, Branon TC, Martell JD, Boassa D, Shechner D, Ellisman MH, Ting A. Correction to Directed Evolution of Split APEX2 Peroxidase. Acs Chemical Biology. PMID 31657543 DOI: 10.1021/Acschembio.9B00798  0.636
2019 Kim KY, Rios LC, Le H, Perez AJ, Phan S, Bushong EA, Deerinck TJ, Liu YH, Ellisman MA, Lev-Ram V, Ju S, Panda SA, Yoon S, Hirayama M, Mure LS, ... ... Ellisman MH, et al. Synaptic Specializations of Melanopsin-Retinal Ganglion Cells in Multiple Brain Regions Revealed by Genetic Label for Light and Electron Microscopy. Cell Reports. 29: 628-644.e6. PMID 31618632 DOI: 10.1016/J.Celrep.2019.09.006  0.796
2019 E Drigo RA, Jacob S, García-Prieto CF, Zheng X, Fukuda M, Nhu HTT, Stelmashenko O, Peçanha FLM, Rodriguez-Diaz R, Bushong E, Deerinck T, Phan S, Ali Y, Leibiger I, Chua M, ... ... Ellisman MH, et al. Author Correction: Structural basis for delta cell paracrine regulation in pancreatic islets. Nature Communications. 10: 4218. PMID 31511521 DOI: 10.1038/S41467-019-12258-7  0.605
2019 Arrojo E Drigo R, Jacob S, García-Prieto CF, Zheng X, Fukuda M, Nhu HTT, Stelmashenko O, Peçanha FLM, Rodriguez-Diaz R, Bushong E, Deerinck T, Phan S, Ali Y, Leibiger I, Chua M, ... ... Ellisman MH, et al. Structural basis for delta cell paracrine regulation in pancreatic islets. Nature Communications. 10: 3700. PMID 31420552 DOI: 10.1038/S41467-019-11517-X  0.619
2019 Vasin A, Sabeva N, Torres C, Phan S, Bushong EA, Ellisman MH, Bykhovskaia M. Two Pathways for the Activity-Dependent Growth and Differentiation of Synaptic Boutons in . Eneuro. PMID 31387877 DOI: 10.1523/ENEURO.0060-19.2019  0.608
2019 Boassa D, Lemieux SP, Lev-Ram V, Hu J, Xiong Q, Phan S, Mackey M, Ramachandra R, Peace RE, Adams SR, Ellisman MH, Ngo JT. Split-miniSOG for Spatially Detecting Intracellular Protein-Protein Interactions by Correlated Light and Electron Microscopy. Cell Chemical Biology. PMID 31378710 DOI: 10.1016/J.Chembiol.2019.07.007  0.675
2019 Zhu Y, Huang M, Bushong E, Phan S, Uytiepo M, Beutter E, Boemer D, Tsui K, Ellisman M, Maximov A. Class IIa HDACs regulate learning and memory through dynamic experience-dependent repression of transcription. Nature Communications. 10: 3469. PMID 31375688 DOI: 10.1038/S41467-019-11409-0  0.603
2019 Schmidt SH, Knape MJ, Boassa D, Mumdey N, Kornev AP, Ellisman MH, Taylor SS, Herberg FW. The dynamic switch mechanism that leads to activation of LRRK2 is embedded in the DFGψ motif in the kinase domain. Proceedings of the National Academy of Sciences of the United States of America. PMID 31292254 DOI: 10.1073/Pnas.1900289116  0.648
2019 Arrojo E Drigo R, Lev-Ram V, Tyagi S, Ramachandra R, Deerinck T, Bushong E, Phan S, Orphan V, Lechene C, Ellisman MH, Hetzer MW. Age Mosaicism across Multiple Scales in Adult Tissues. Cell Metabolism. PMID 31178361 DOI: 10.1016/J.Cmet.2019.05.010  0.633
2019 Zhang Y, Tsang TK, Bushong EA, Chu LA, Chiang AS, Ellisman MH, Reingruber J, Su CY. Asymmetric ephaptic inhibition between compartmentalized olfactory receptor neurons. Nature Communications. 10: 1560. PMID 30952860 DOI: 10.1038/S41467-019-09346-Z  0.626
2019 Han Y, Branon TC, Martell JD, Boassa D, Shechner D, Ellisman MH, Ting A. Directed Evolution of Split APEX2 Peroxidase. Acs Chemical Biology. PMID 30848125 DOI: 10.1021/Acschembio.8B00919  0.667
2019 Boassa D, Ngo JT, Mackey MR, Ramachandra R, Deerinck TJ, Ellisman MH, Adams SR. New Molecular Tools for Protein Detection and Dynamics in Electron Microscopy Microscopy and Microanalysis. 25: 1042-1043. DOI: 10.1017/S1431927619005944  0.677
2018 Pipkin JE, Bushong EA, Ellisman MH, Kristan WB. Verifying, Challenging, and Discovering New Synapses Among Fully EM-Reconstructed Neurons in the Leech Ganglion. Frontiers in Neuroanatomy. 12: 95. PMID 30487738 DOI: 10.3389/Fnana.2018.00095  0.649
2018 Hatani T, Funakoshi S, Deerinck TJ, Bushong EA, Kimura T, Takeshima H, Ellisman MH, Hoshijima M, Yoshida Y. Nano-structural analysis of engrafted human induced pluripotent stem cell-derived cardiomyocytes in mouse hearts using a genetic-probe APEX2. Biochemical and Biophysical Research Communications. PMID 30333092 DOI: 10.1016/J.Bbrc.2018.10.020  0.635
2018 Haberl MG, Churas C, Tindall L, Boassa D, Phan S, Bushong EA, Madany M, Akay R, Deerinck TJ, Peltier ST, Ellisman MH. CDeep3M-Plug-and-Play cloud-based deep learning for image segmentation. Nature Methods. 15: 677-680. PMID 30171236 DOI: 10.1038/S41592-018-0106-Z  0.781
2018 Zerbi V, Ielacqua GD, Markicevic M, Haberl MG, Ellisman MH, A-Bhaskaran A, Frick A, Rudin M, Wenderoth N. Dysfunctional Autism Risk Genes Cause Circuit-Specific Connectivity Deficits With Distinct Developmental Trajectories. Cerebral Cortex (New York, N.Y. : 1991). 28: 2495-2506. PMID 29901787 DOI: 10.1093/Cercor/Bhy046  0.772
2018 Katchalski T, Case T, Kim KY, Ramachandra R, Bushong EA, Deerinck TJ, Haberl MG, Mackey MR, Peltier S, Castillon GA, Fujikawa N, Lawrence AR, Ellisman MH. Iron-specific Signal Separation from within Heavy Metal Stained Biological Samples Using X-Ray Microtomography with Polychromatic Source and Energy-Integrating Detectors. Scientific Reports. 8: 7553. PMID 29765060 DOI: 10.1038/S41598-018-25099-Z  0.777
2018 Tsang TK, Bushong EA, Boassa D, Hu J, Romoli B, Phan S, Dulcis D, Su CY, Ellisman MH. High-quality ultrastructural preservation using cryofixation for 3D electron microscopy of genetically labeled tissues. Elife. 7. PMID 29749931 DOI: 10.7554/Elife.35524  0.784
2018 McGlynn SE, Chadwick GL, O'Neill A, Mackey M, Thor A, Deerinck TJ, Ellisman MH, Orphan VJ. Subgroup characteristics of marine methane-oxidizing ANME-2 archaea and their syntrophic partners revealed by integrated multimodal analytical microscopy. Applied and Environmental Microbiology. PMID 29625978 DOI: 10.1128/Aem.00399-18  0.322
2018 Lee JK, Enciso GA, Boassa D, Chander CN, Lou TH, Pairawan SS, Guo MC, Wan FYM, Ellisman MH, Sütterlin C, Tan M. Replication-dependent size reduction precedes differentiation in Chlamydia trachomatis. Nature Communications. 9: 45. PMID 29298975 DOI: 10.1038/S41467-017-02432-0  0.655
2018 Tsang TK, Bushong EA, Boassa D, Hu J, Romoli B, Phan S, Dulcis D, Su C, Ellisman MH. Author response: High-quality ultrastructural preservation using cryofixation for 3D electron microscopy of genetically labeled tissues Elife. DOI: 10.7554/Elife.35524.028  0.769
2018 E DRIGO RA, TOYAMA BH, TYAGI S, LEV-RAM V, DEERINCK TJ, BUSHONG EA, RAMACHANDRA R, LECHENE C, ELLISMAN MH, HETZER M. Longevity of Beta Cells and Protein Complexes Revealed by Isotope Imaging Diabetes. 67: 307-LB. DOI: 10.2337/Db18-307-Lb  0.623
2017 Deerinck TJ, Shone TM, Bushong EA, Ramachandra R, Peltier ST, Ellisman MH. High-performance serial block-face SEM of nonconductive biological samples enabled by focal gas injection-based charge compensation. Journal of Microscopy. 270: 142-149. PMID 29194648 DOI: 10.1111/Jmi.12667  0.629
2017 Petersen MA, Ryu JK, Chang KJ, Etxeberria A, Bardehle S, Mendiola AS, Kamau-Devers W, Fancy SPJ, Thor A, Bushong EA, Baeza-Raja B, Syme CA, Wu MD, Rios Coronado PE, Meyer-Franke A, ... ... Ellisman MH, et al. Fibrinogen Activates BMP Signaling in Oligodendrocyte Progenitor Cells and Inhibits Remyelination after Vascular Damage. Neuron. PMID 29103804 DOI: 10.1016/J.Neuron.2017.10.008  0.612
2017 Churas C, Perez AJ, Hakozaki H, Wong W, Lee D, Peltier ST, Ellisman MH. Probability Map Viewer: near real-time probability map generator of serial block electron microscopy collections. Bioinformatics (Oxford, England). 33: 3145-3147. PMID 28957496 DOI: 10.1093/Bioinformatics/Btx376  0.776
2017 Vollnhals F, Audinot JN, Wirtz T, Mercier-Bonin M, Fourquaux I, Schroeppel B, Kraushaar U, Lev-Ram V, Ellisman MH, Eswara S. Correlative Microscopy combining Secondary Ion Mass Spectrometry and Electron Microscopy: Comparison of Intensity-Hue-Saturation and Laplace Pyramid Methods for Image Fusion. Analytical Chemistry. PMID 28901122 DOI: 10.1021/Acs.Analchem.7B01256  0.329
2017 Martell JD, Deerinck TJ, Lam SS, Ellisman MH, Ting AY. Electron microscopy using the genetically encoded APEX2 tag in cultured mammalian cells. Nature Protocols. 12: 1792-1816. PMID 28796234 DOI: 10.1038/Nprot.2017.065  0.356
2017 Goo MS, Sancho L, Slepak N, Boassa D, Deerinck TJ, Ellisman MH, Bloodgood BL, Patrick GN. Activity-dependent trafficking of lysosomes in dendrites and dendritic spines. The Journal of Cell Biology. PMID 28630145 DOI: 10.1083/Jcb.201704068  0.691
2017 Sando R, Bushong E, Zhu Y, Huang M, Considine C, Phan S, Ju S, Uytiepo M, Ellisman M, Maximov A. Assembly of Excitatory Synapses in the Absence of Glutamatergic Neurotransmission. Neuron. 94: 312-321.e3. PMID 28426966 DOI: 10.1016/J.Neuron.2017.03.047  0.637
2017 Wan X, Katchalski T, Churas C, Ghosh S, Phan S, Lawrence A, Hao Y, Zhou Z, Chen R, Chen Y, Zhang F, Ellisman MH. Electron tomography simulator with realistic 3D phantom for evaluation of acquisition, alignment and reconstruction methods. Journal of Structural Biology. PMID 28392451 DOI: 10.1016/j.jsb.2017.04.002  0.342
2017 Falkenberg CV, Azeloglu EU, Stothers M, Deerinck TJ, Chen Y, He JC, Ellisman MH, Hone JC, Iyengar R, Loew LM. Fragility of foot process morphology in kidney podocytes arises from chaotic spatial propagation of cytoskeletal instability. Plos Computational Biology. 13: e1005433. PMID 28301477 DOI: 10.1371/Journal.Pcbi.1005433  0.303
2017 Cao M, Wu Y, Ashrafi G, McCartney AJ, Wheeler H, Bushong EA, Boassa D, Ellisman MH, Ryan TA, De Camilli P. Parkinson Sac Domain Mutation in Synaptojanin 1 Impairs Clathrin Uncoating at Synapses and Triggers Dystrophic Changes in Dopaminergic Axons. Neuron. 93: 882-896.e5. PMID 28231468 DOI: 10.1016/J.Neuron.2017.01.019  0.766
2017 de Vivo L, Bellesi M, Marshall W, Bushong EA, Ellisman MH, Tononi G, Cirelli C. Ultrastructural evidence for synaptic scaling across the wake/sleep cycle. Science (New York, N.Y.). 355: 507-510. PMID 28154076 DOI: 10.1126/Science.Aah5982  0.618
2017 Hammerling BC, Najor RH, Cortez MQ, Shires SE, Leon LJ, Gonzalez ER, Boassa D, Phan S, Thor A, Jimenez RE, Li H, Kitsis RN, Dorn Ii GW, Sadoshima J, Ellisman MH, et al. A Rab5 endosomal pathway mediates Parkin-dependent mitochondrial clearance. Nature Communications. 8: 14050. PMID 28134239 DOI: 10.1038/Ncomms14050  0.655
2017 Ilouz R, Lev-Ram V, Bushong EA, Stiles TL, Friedmann-Morvinski D, Douglas C, Goldberg G, Ellisman MH, Taylor SS. Isoform-specific subcellular localization and function of protein kinase A identified by mosaic imaging of mouse brain. Elife. 6. PMID 28079521 DOI: 10.7554/Elife.17681  0.655
2017 Bouwer JC, Deerinck TJ, Bushong E, Astakhov V, Ramachandra R, Peltier ST, Ellisman MH. Deceleration of probe beam by stage bias potential improves resolution of serial block-face scanning electron microscopic images. Advanced Structural and Chemical Imaging. 2: 11. PMID 27695667 DOI: 10.1186/S40679-016-0025-Y  0.794
2017 Phan S, Boassa D, Nguyen P, Wan X, Lanman J, Lawrence A, Ellisman MH. 3D reconstruction of biological structures: automated procedures for alignment and reconstruction of multiple tilt series in electron tomography. Advanced Structural and Chemical Imaging. 2: 8. PMID 27547706 DOI: 10.1186/S40679-016-0021-2  0.703
2016 Gillies AR, Chapman MA, Bushong EA, Deerinck TJ, Ellisman MH, Lieber RL. High resolution three-dimensional reconstruction of fibrotic skeletal muscle extracellular matrix. The Journal of Physiology. PMID 27859324 DOI: 10.1113/Jp273376  0.612
2016 Adams SR, Mackey MR, Ramachandra R, Palida Lemieux SF, Steinbach P, Bushong EA, Butko MT, Giepmans BN, Ellisman MH, Tsien RY. Multicolor Electron Microscopy for Simultaneous Visualization of Multiple Molecular Species. Cell Chemical Biology. PMID 27818300 DOI: 10.1016/J.Chembiol.2016.10.006  0.678
2016 Pipkin JE, Bushong EA, Ellisman MH, Kristan WB. Patterns and distribution of presynaptic and postsynaptic elements within serial electron microscopic reconstructions of neuronal arbors from the medicinal leech Hirudo verbana. The Journal of Comparative Neurology. PMID 27636374 DOI: 10.1002/Cne.24120  0.658
2016 Loh KH, Stawski PS, Draycott AS, Udeshi ND, Lehrman EK, Wilton DK, Svinkina T, Deerinck TJ, Ellisman MH, Stevens B, Carr SA, Ting AY. Proteomic Analysis of Unbounded Cellular Compartments: Synaptic Clefts. Cell. 166: 1295-1307.e21. PMID 27565350 DOI: 10.1016/J.Cell.2016.07.041  0.525
2016 Martell JD, Yamagata M, Deerinck TJ, Phan S, Kwa CG, Ellisman MH, Sanes JR, Ting AY. A split horseradish peroxidase for the detection of intercellular protein-protein interactions and sensitive visualization of synapses. Nature Biotechnology. PMID 27240195 DOI: 10.1038/Nbt.3563  0.318
2016 Ou HD, Deerinck TJ, Bushong E, Ellisman MH, O'Shea CC. Corrigendum to 'Visualizing viral protein structures in cells using genetic probes for correlated light and electron microscopy' [Methods 90 (2015) 39-48]. Methods (San Diego, Calif.). PMID 27221672 DOI: 10.1016/J.Ymeth.2016.05.005  0.642
2016 Ngo JT, Adams SR, Deerinck TJ, Boassa D, Rodriguez-Rivera F, Palida SF, Bertozzi CR, Ellisman MH, Tsien RY. Click-EM for imaging metabolically tagged nonprotein biomolecules. Nature Chemical Biology. PMID 27110681 DOI: 10.1038/Nchembio.2076  0.687
2016 Moss J, Gebara E, Bushong EA, Sánchez-Pascual I, O'Laoi R, El M'Ghari I, Kocher-Braissant J, Ellisman MH, Toni N. Fine processes of Nestin-GFP-positive radial glia-like stem cells in the adult dentate gyrus ensheathe local synapses and vasculature. Proceedings of the National Academy of Sciences of the United States of America. PMID 27091993 DOI: 10.1073/Pnas.1514652113  0.647
2016 Jung JY, Naleway SE, Yaraghi NA, Herrera S, Sherman VR, Bushong EA, Ellisman MH, Kisailus D, McKittrick J. Structural analysis of the tongue and hyoid apparatus in a woodpecker. Acta Biomaterialia. PMID 27000554 DOI: 10.1016/J.Actbio.2016.03.030  0.618
2016 Zhong Z, Umemura A, Sanchez-Lopez E, Liang S, Shalapour S, Wong J, He F, Boassa D, Perkins G, Ali SR, McGeough MD, Ellisman MH, Seki E, Gustafsson AB, Hoffman HM, et al. NF-κB Restricts Inflammasome Activation via Elimination of Damaged Mitochondria. Cell. 164: 896-910. PMID 26919428 DOI: 10.1016/J.Cell.2015.12.057  0.64
2016 Lawrence A, Katchalski T, Perez A, Lev-Ram V, Boassa D, Deerinck T, Phan S, Peltier S, Ellisman M. Biological systems through the informational lens Procedia Computer Science. 80: 650-661. DOI: 10.1016/j.procs.2016.05.355  0.775
2015 Rubio-Marrero EN, Vincelli G, Jeffries CM, Shaikh TR, Pakos I, Ranaivoson FM, von Daake S, Demeler B, De Jaco A, Perkins G, Ellisman MH, Trewhella J, Comoletti D. Structural characterization of the extracellular domain of CASPR2 and insights into its association with the novel ligand Contactin1. The Journal of Biological Chemistry. PMID 26721881 DOI: 10.1074/Jbc.M115.705681  0.303
2015 Mills EA, Davis CH, Bushong EA, Boassa D, Kim KY, Ellisman MH, Marsh-Armstrong N. Astrocytes phagocytose focal dystrophies from shortening myelin segments in the optic nerve of Xenopus laevis at metamorphosis. Proceedings of the National Academy of Sciences of the United States of America. 112: 10509-14. PMID 26240339 DOI: 10.1073/Pnas.1506486112  0.754
2015 Schachtrup C, Ryu JK, Mammadzada K, Khan AS, Carlton PM, Perez A, Christian F, Le Moan N, Vagena E, Baeza-Raja B, Rafalski V, Chan JP, Nitschke R, Houslay MD, Ellisman MH, et al. Nuclear pore complex remodeling by p75(NTR) cleavage controls TGF-β signaling and astrocyte functions. Nature Neuroscience. PMID 26120963 DOI: 10.1038/Nn.4054  0.767
2015 Ou HD, Deerinck TJ, Bushong E, Ellisman MH, O'Shea CC. Visualizing viral protein structures in cells using genetic probes for correlated light and electron microscopy. Methods (San Diego, Calif.). PMID 26066760 DOI: 10.1016/J.Ymeth.2015.06.002  0.64
2015 Kim D, Deerinck TJ, Sigal YM, Babcock HP, Ellisman MH, Zhuang X. Correlative stochastic optical reconstruction microscopy and electron microscopy. Plos One. 10: e0124581. PMID 25874453 DOI: 10.1371/Journal.Pone.0124581  0.346
2015 Jones C, Liu T, Cohan NW, Ellisman M, Tasdizen T. Efficient semi-automatic 3D segmentation for neuron tracing in electron microscopy images. Journal of Neuroscience Methods. 246: 13-21. PMID 25769273 DOI: 10.1016/J.Jneumeth.2015.03.005  0.323
2015 Lam SS, Martell JD, Kamer KJ, Deerinck TJ, Ellisman MH, Mootha VK, Ting AY. Directed evolution of APEX2 for electron microscopy and proximity labeling. Nature Methods. 12: 51-4. PMID 25419960 DOI: 10.1038/Nmeth.3179  0.351
2015 Bushong EA, Johnson DD, Kim KY, Terada M, Hatori M, Peltier ST, Panda S, Merkle A, Ellisman MH. X-ray microscopy as an approach to increasing accuracy and efficiency of serial block-face imaging for correlated light and electron microscopy of biological specimens. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 21: 231-8. PMID 25392009 DOI: 10.1017/S1431927614013579  0.671
2015 Mills EA, Davis CHO, Bushong EA, Boassa D, Kim KY, Ellisman MH, Marsh-Armstrong N. Astrocytes phagocytose focal dystrophies from shortening myelin segments in the optic nerve of Xenopus laevis at metamorphosis Proceedings of the National Academy of Sciences of the United States of America. 112: 10509-10514. DOI: 10.1073/pnas.1506486112  0.735
2015 Kim KY, Perkins GA, Shim MS, Bushong E, Alcasid N, Ju S, Ellisman MH, Weinreb RN, Ju WK. DRP1 inhibition rescues retinal ganglion cells and their axons by preserving mitochondrial integrity in a mouse model of glaucoma Cell Death and Disease. 6. DOI: 10.1038/cddis.2015.180  0.576
2015 Deerinck T, Bushong E, Ellisman M. Correlative Microscopy using Serial Blockface Scanning EM Microscopy and Microanalysis. 21: 1381-1382. DOI: 10.1017/S1431927615007692  0.629
2015 Ellisman MH, Deerinck TJ, Kim KY, Bushong EA, Phan S, Ting AY, Boassa D. Advances in molecular probe-based labeling tools and their application to multiscale multimodal correlated microscopies Journal of Chemical Biology. DOI: 10.1007/S12154-015-0132-6  0.783
2014 Boassa D, Nguyen P, Hu J, Ellisman MH, Sosinsky GE. Pannexin2 oligomers localize in the membranes of endosomal vesicles in mammalian cells while Pannexin1 channels traffic to the plasma membrane. Frontiers in Cellular Neuroscience. 8: 468. PMID 25698922 DOI: 10.3389/Fncel.2014.00468  0.697
2014 Perez AJ, Seyedhosseini M, Deerinck TJ, Bushong EA, Panda S, Tasdizen T, Ellisman MH. A workflow for the automatic segmentation of organelles in electron microscopy image stacks. Frontiers in Neuroanatomy. 8: 126. PMID 25426032 DOI: 10.3389/Fnana.2014.00126  0.799
2014 Liu DS, Nivón LG, Richter F, Goldman PJ, Deerinck TJ, Yao JZ, Richardson D, Phipps WS, Ye AZ, Ellisman MH, Drennan CL, Baker D, Ting AY. Computational design of a red fluorophore ligase for site-specific protein labeling in living cells. Proceedings of the National Academy of Sciences of the United States of America. 111: E4551-9. PMID 25313043 DOI: 10.1073/Pnas.1404736111  0.325
2014 Patwardhan A, Ashton A, Brandt R, Butcher S, Carzaniga R, Chiu W, Collinson L, Doux P, Duke E, Ellisman MH, Franken E, Grünewald K, Heriche JK, Koster A, Kühlbrandt W, et al. A 3D cellular context for the macromolecular world. Nature Structural & Molecular Biology. 21: 841-5. PMID 25289590 DOI: 10.1038/Nsmb.2897  0.309
2014 Gillies AR, Bushong EA, Deerinck TJ, Ellisman MH, Lieber RL. Three-dimensional reconstruction of skeletal muscle extracellular matrix ultrastructure. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 20: 1835-40. PMID 25275291 DOI: 10.1017/S1431927614013300  0.627
2014 Davis CH, Kim KY, Bushong EA, Mills EA, Boassa D, Shih T, Kinebuchi M, Phan S, Zhou Y, Bihlmeyer NA, Nguyen JV, Jin Y, Ellisman MH, Marsh-Armstrong N. Transcellular degradation of axonal mitochondria. Proceedings of the National Academy of Sciences of the United States of America. 111: 9633-8. PMID 24979790 DOI: 10.1073/Pnas.1404651111  0.767
2014 Cleyrat C, Darehshouri A, Steinkamp MP, Vilaine M, Boassa D, Ellisman MH, Hermouet S, Wilson BS. Mpl traffics to the cell surface through conventional and unconventional routes. Traffic (Copenhagen, Denmark). 15: 961-82. PMID 24931576 DOI: 10.1111/Tra.12185  0.674
2014 Haustein MD, Kracun S, Lu XH, Shih T, Jackson-Weaver O, Tong X, Xu J, Yang XW, O'Dell TJ, Marvin JS, Ellisman MH, Bushong EA, Looger LL, Khakh BS. Conditions and constraints for astrocyte calcium signaling in the hippocampal mossy fiber pathway. Neuron. 82: 413-29. PMID 24742463 DOI: 10.1016/J.Neuron.2014.02.041  0.621
2014 Bos E, Hussaarts L, van Weering JR, Ellisman MH, de Wit H, Koster AJ. Vitrification of Tokuyasu-style immuno-labelled sections for correlative cryo light microscopy and cryo electron tomography. Journal of Structural Biology. 186: 273-82. PMID 24704216 DOI: 10.1016/j.jsb.2014.03.021  0.353
2014 Ramachandra R, Bouwer JC, Mackey MR, Bushong E, Peltier ST, Xuong NH, Ellisman MH. Improving signal to noise in labeled biological specimens using energy-filtered TEM of sections with a drift correction strategy and a direct detection device. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 20: 706-14. PMID 24641915 DOI: 10.1017/S1431927614000452  0.792
2014 Wilke SA, Raam T, Antonios JK, Bushong EA, Koo EH, Ellisman MH, Ghosh A. Specific disruption of hippocampal mossy fiber synapses in a mouse model of familial Alzheimer's disease. Plos One. 9: e84349. PMID 24454724 DOI: 10.1371/Journal.Pone.0084349  0.627
2014 Kittelmann M, Hegermann J, Goncharov A, Taru H, Ellisman MH, Richmond JE, Jin Y, Eimer S. Liprin-alpha/SYD-2 determines the size of dense projections in presynaptic active zones in C. elegans The Journal of General Physiology. 143. DOI: 10.1085/Jgp.1431Oia55  0.336
2014 Ellisman MH, Boassa D, Nguyen P, Wan X, Lawrence A, Lanman J, Phan S. Automated procedures for the alignment and reconstruction of multiple tilt electron microscopic tomography data Microscopy and Microanalysis. 20: 1258-1259. DOI: 10.1017/S1431927614008022  0.678
2013 Kittelmann M, Hegermann J, Goncharov A, Taru H, Ellisman MH, Richmond JE, Jin Y, Eimer S. Liprin-α/SYD-2 determines the size of dense projections in presynaptic active zones in C. elegans. The Journal of Cell Biology. 203: 849-63. PMID 24322429 DOI: 10.1083/Jcb.201302022  0.34
2013 Holcomb PS, Hoffpauir BK, Hoyson MC, Jackson DR, Deerinck TJ, Marrs GS, Dehoff M, Wu J, Ellisman MH, Spirou GA. Synaptic inputs compete during rapid formation of the calyx of Held: a new model system for neural development. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 12954-69. PMID 23926251 DOI: 10.1523/Jneurosci.1087-13.2013  0.313
2013 Wong J, Baddeley D, Bushong EA, Yu Z, Ellisman MH, Hoshijima M, Soeller C. Nanoscale distribution of ryanodine receptors and caveolin-3 in mouse ventricular myocytes: dilation of t-tubules near junctions. Biophysical Journal. 104: L22-4. PMID 23746531 DOI: 10.1016/J.Bpj.2013.02.059  0.639
2013 Lu W, Bushong EA, Shih TP, Ellisman MH, Nicoll RA. The cell-autonomous role of excitatory synaptic transmission in the regulation of neuronal structure and function. Neuron. 78: 433-9. PMID 23664612 DOI: 10.1016/J.Neuron.2013.02.030  0.635
2013 Shigetomi E, Bushong EA, Haustein MD, Tong X, Jackson-Weaver O, Kracun S, Xu J, Sofroniew MV, Ellisman MH, Khakh BS. Imaging calcium microdomains within entire astrocyte territories and endfeet with GCaMPs expressed using adeno-associated viruses. The Journal of General Physiology. 141: 633-47. PMID 23589582 DOI: 10.1085/Jgp.201210949  0.636
2013 Boassa D, Berlanga ML, Yang MA, Terada M, Hu J, Bushong EA, Hwang M, Masliah E, George JM, Ellisman MH. Mapping the subcellular distribution of α-synuclein in neurons using genetically encoded probes for correlated light and electron microscopy: implications for Parkinson's disease pathogenesis. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 2605-15. PMID 23392688 DOI: 10.1523/Jneurosci.2898-12.2013  0.797
2013 Wilke SA, Antonios JK, Bushong EA, Badkoobehi A, Malek E, Hwang M, Terada M, Ellisman MH, Ghosh A. Deconstructing complexity: serial block-face electron microscopic analysis of the hippocampal mossy fiber synapse. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 507-22. PMID 23303931 DOI: 10.1523/Jneurosci.1600-12.2013  0.659
2013 Orloff DN, Iwasa JH, Martone ME, Ellisman MH, Kane CM. The cell: an image library-CCDB: a curated repository of microscopy data. Nucleic Acids Research. 41: D1241-50. PMID 23203874 DOI: 10.1093/Nar/Gks1257  0.67
2013 Jurrus E, Watanabe S, Giuly RJ, Paiva AR, Ellisman MH, Jorgensen EM, Tasdizen T. Semi-automated neuron boundary detection and nonbranching process segmentation in electron microscopy images. Neuroinformatics. 11: 5-29. PMID 22644867 DOI: 10.1007/S12021-012-9149-Y  0.329
2013 Cone A, Martell J, Deerinck T, Cavin G, Ambrosi C, Ting A, Ellisman M, Sosinsky G. Correlative Light and Electron Microscopic Imaging of Gap Junction Life Cycle Dynamics Using the EM Protein Tags and Phospho-Specific Antibodies Microscopy and Microanalysis. 19: 552-553. DOI: 10.1017/S1431927613004753  0.331
2012 Perkins GA, Scott R, Perez A, Ellisman MH, Johnson JE, Fox DA. Bcl-xL-mediated remodeling of rod and cone synaptic mitochondria after postnatal lead exposure: electron microscopy, tomography and oxygen consumption. Molecular Vision. 18: 3029-48. PMID 23288995  0.678
2012 Butko MT, Yang J, Geng Y, Kim HJ, Jeon NL, Shu X, Mackey MR, Ellisman MH, Tsien RY, Lin MZ. Fluorescent and photo-oxidizing TimeSTAMP tags track protein fates in light and electron microscopy. Nature Neuroscience. 15: 1742-51. PMID 23103964 DOI: 10.1038/Nn.3246  0.339
2012 Friedmann-Morvinski D, Bushong EA, Ke E, Soda Y, Marumoto T, Singer O, Ellisman MH, Verma IM. Dedifferentiation of neurons and astrocytes by oncogenes can induce gliomas in mice. Science (New York, N.Y.). 338: 1080-4. PMID 23087000 DOI: 10.1126/Science.1226929  0.618
2012 Martell JD, Deerinck TJ, Sancak Y, Poulos TL, Mootha VK, Sosinsky GE, Ellisman MH, Ting AY. Engineered ascorbate peroxidase as a genetically encoded reporter for electron microscopy. Nature Biotechnology. 30: 1143-8. PMID 23086203 DOI: 10.1038/Nbt.2375  0.352
2012 Phan S, Lawrence A, Molina T, Lanman J, Berlanga M, Terada M, Kulungowski A, Obayashi J, Ellisman M. TxBR montage reconstruction for large field electron tomography. Journal of Structural Biology. 180: 154-64. PMID 22749959 DOI: 10.1016/J.Jsb.2012.06.006  0.335
2012 Burette AC, Lesperance T, Crum J, Martone M, Volkmann N, Ellisman MH, Weinberg RJ. Electron tomographic analysis of synaptic ultrastructure. The Journal of Comparative Neurology. 520: 2697-711. PMID 22684938 DOI: 10.1002/Cne.23067  0.643
2012 Hatori M, Vollmers C, Zarrinpar A, DiTacchio L, Bushong EA, Gill S, Leblanc M, Chaix A, Joens M, Fitzpatrick JA, Ellisman MH, Panda S. Time-restricted feeding without reducing caloric intake prevents metabolic diseases in mice fed a high-fat diet. Cell Metabolism. 15: 848-60. PMID 22608008 DOI: 10.1016/J.Cmet.2012.04.019  0.587
2012 Giuly RJ, Martone ME, Ellisman MH. Method: automatic segmentation of mitochondria utilizing patch classification, contour pair classification, and automatically seeded level sets. Bmc Bioinformatics. 13: 29. PMID 22321695 DOI: 10.1186/1471-2105-13-29  0.643
2012 Kett LR, Boassa D, Ho CC, Rideout HJ, Hu J, Terada M, Ellisman M, Dauer WT. LRRK2 Parkinson disease mutations enhance its microtubule association. Human Molecular Genetics. 21: 890-9. PMID 22080837 DOI: 10.1093/Hmg/Ddr526  0.659
2012 Cleyrat C, Darehshouri A, Vilaine M, Steinkamp MP, Boassa D, Ellisman MH, Hermouet S, Wilson BS. Autophagy of ER-Retained Mpl Is Linked to Low Expression Levels of Jak2 and Provides an Unconventional Route to Cell Surface. Blood. 120: 2861-2861. DOI: 10.1182/Blood.V120.21.2861.2861  0.683
2012 Friedmann-Morvinski D, Bushong E, Ke E, Singer O, Marumoto T, Soda Y, Ellisman MH, Verma IM. Abstract LB-191: Glioblastomas can originate from neurons in the CNS Cancer Research. 72. DOI: 10.1158/1538-7445.Am2012-Lb-191  0.626
2012 Deerinck T, Bushong E, Tsien R, Ellisman M, Shu X. Advances in Correlated Light and Electron Microscopy Imaging Probes Microscopy and Microanalysis. 18: 834-835. DOI: 10.1017/S1431927612006022  0.625
2012 Astakhov V, Bandrowski A, Gupta A, Kulungowski AW, Grethe JS, Bouwer J, Molina T, Rowley V, Penticoff S, Terada M, Wong W, Hakozaki H, Kwon O, Martone ME, Ellisman M. Prototype of Kepler processing workflows for microscopy and neuroinformatics Procedia Computer Science. 9: 1595-1603. DOI: 10.1016/j.procs.2012.04.175  0.738
2012 Yan J, Walker CG, O'sullivan MJ, Bushong EA, Ellisman MH, Hoshijima M, Rajagopal V. Visualization, Modeling, and Spatial Statistics of Mitochondrial Assembly in Adult Cardiomyocytes using Serial Block-Face Scanning Electron Microscopy Biophysical Journal. 102: 142a. DOI: 10.1016/J.Bpj.2011.11.780  0.655
2012 Wong JIS, Baddeley D, Bushong EA, Ellisman M, Hoshijima M, Soeller C. 3D Imaging of Nanoscopic Membrane Systems Regulating Cardiac Excitation-Contraction Coupling: Multi-Color Optical Super-Resolution and Serial Block-Face Scanning Electron Microscopy Biophysical Journal. 102: 408a. DOI: 10.1016/J.Bpj.2011.11.2229  0.657
2011 Milazzo AC, Cheng A, Moeller A, Lyumkis D, Jacovetty E, Polukas J, Ellisman MH, Xuong NH, Carragher B, Potter CS. Initial evaluation of a direct detection device detector for single particle cryo-electron microscopy. Journal of Structural Biology. 176: 404-8. PMID 21933715 DOI: 10.1016/J.Jsb.2011.09.002  0.304
2011 Foo LC, Allen NJ, Bushong EA, Ventura PB, Chung WS, Zhou L, Cahoy JD, Daneman R, Zong H, Ellisman MH, Barres BA. Development of a method for the purification and culture of rodent astrocytes. Neuron. 71: 799-811. PMID 21903074 DOI: 10.1016/J.Neuron.2011.07.022  0.611
2011 Williams ME, Wilke SA, Daggett A, Davis E, Otto S, Ravi D, Ripley B, Bushong EA, Ellisman MH, Klein G, Ghosh A. Cadherin-9 regulates synapse-specific differentiation in the developing hippocampus. Neuron. 71: 640-55. PMID 21867881 DOI: 10.1016/J.Neuron.2011.06.019  0.62
2011 Bagnall MW, Hull C, Bushong EA, Ellisman MH, Scanziani M. Multiple clusters of release sites formed by individual thalamic afferents onto cortical interneurons ensure reliable transmission. Neuron. 71: 180-94. PMID 21745647 DOI: 10.1016/J.Neuron.2011.05.032  0.637
2011 Berlanga ML, Phan S, Bushong EA, Wu S, Kwon O, Phung BS, Lamont S, Terada M, Tasdizen T, Martone ME, Ellisman MH. Three-dimensional reconstruction of serial mouse brain sections: solution for flattening high-resolution large-scale mosaics. Frontiers in Neuroanatomy. 5: 17. PMID 21629828 DOI: 10.3389/Fnana.2011.00017  0.76
2011 Shu X, Lev-Ram V, Deerinck TJ, Qi Y, Ramko EB, Davidson MW, Jin Y, Ellisman MH, Tsien RY. A genetically encoded tag for correlated light and electron microscopy of intact cells, tissues, and organisms. Plos Biology. 9: e1001041. PMID 21483721 DOI: 10.1371/Journal.Pbio.1001041  0.349
2011 Berlanga ML, Price DL, Phung BS, Giuly R, Terada M, Yamada N, Cyr M, Caron MG, Laakso A, Martone ME, Ellisman MH. Multiscale imaging characterization of dopamine transporter knockout mice reveals regional alterations in spine density of medium spiny neurons. Brain Research. 1390: 41-9. PMID 21439946 DOI: 10.1016/J.Brainres.2011.03.044  0.668
2011 Shu X, Lev-Ram V, Olson ES, Aguilera TA, Jiang T, Whitney M, Crisp JL, Steinbach P, Deerinck T, Ellisman MH, Ellies LG, Nguyen QT, Tsien RY. Spiers Memorial Lecture. Breeding and building molecular spies. Faraday Discussions. 149: 9; discussion 63-77. PMID 21413170 DOI: 10.1039/C0Fd90021D  0.322
2011 Nguyen JV, Soto I, Kim KY, Bushong EA, Oglesby E, Valiente-Soriano FJ, Yang Z, Davis CH, Bedont JL, Son JL, Wei JO, Buchman VL, Zack DJ, Vidal-Sanz M, Ellisman MH, et al. Myelination transition zone astrocytes are constitutively phagocytic and have synuclein dependent reactivity in glaucoma. Proceedings of the National Academy of Sciences of the United States of America. 108: 1176-81. PMID 21199938 DOI: 10.1073/Pnas.1013965108  0.623
2011 Sun S, Chen J, Li W, Altintas I, Lin A, Peltier S, Stocks K, Allen EE, Ellisman M, Grethe J, Wooley J. Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource. Nucleic Acids Research. 39: D546-51. PMID 21045053 DOI: 10.1093/Nar/Gkq1102  0.611
2011 Friedmann-Morvinski D, Bushong E, Singer O, Marumoto T, Soda Y, Ellisman MH, Verma IM. Abstract 975: Glioma cell of origin: Reprogramming and cancer stem cells Cancer Research. 71: 975-975. DOI: 10.1158/1538-7445.Am2011-975  0.623
2011 Ragsdale EJ, Ngo PT, Crum J, Ellisman MH, Baldwin JG. Reconstruction of the pharyngeal corpus of Aphelenchus avenae (Nematoda: Tylenchomorpha), with implications for phylogenetic congruence Zoological Journal of the Linnean Society. 161: 1-30. DOI: 10.1111/J.1096-3642.2009.00632.X  0.311
2011 Ellisman M, Deerinck T, Bushong E, Bouwer J, Shone T, Jin L, Milazzo A, Peltier S, Xuong N. Advances in Extreme-Scale 3D EM: Specimen Preparation and Recording Systems for Electron Microscopic Tomography and Serial Block Face SEM Microscopy and Microanalysis. 17: 976-977. DOI: 10.1017/S1431927611005757  0.787
2011 Bouwer J, Astakov V, Wong W, Molina T, Rowley V, Lamont S, Hakozaki H, Kwon O, Kulungowski A, Terada M, Peltier S, Martone M, Ellisman M. Petabyte Data Management and Automated Data Workflow in Neuroscience: Delivering Data from the Instruments to the Researcher's Fingertips Microscopy and Microanalysis. 17: 276-277. DOI: 10.1017/S143192761100225X  0.767
2011 Mungall CJ, Anderson D, Bandrowski A, Canada B, Chatyr-Aryamontri A, Cheng K, Conn PM, Dolinski K, Ellisman M, Eppig J, Grethe JS, Kemnitz J, Iadonato S, Larson SD, Magness C, et al. An ontology-based approach to linking model organisms and resources to human diseases Ceur Workshop Proceedings. 833: 263-265.  0.719
2010 Kim CE, Perez A, Perkins G, Ellisman MH, Dauer WT. A molecular mechanism underlying the neural-specific defect in torsinA mutant mice. Proceedings of the National Academy of Sciences of the United States of America. 107: 9861-6. PMID 20457914 DOI: 10.1073/Pnas.0912877107  0.689
2010 Milazzo AC, Moldovan G, Lanman J, Jin L, Bouwer JC, Klienfelder S, Peltier ST, Ellisman MH, Kirkland AI, Xuong NH. Characterization of a direct detection device imaging camera for transmission electron microscopy. Ultramicroscopy. 110: 744-7. PMID 20382479 DOI: 10.1016/J.Ultramic.2010.03.007  0.729
2010 Perkins GA, Tjong J, Brown JM, Poquiz PH, Scott RT, Kolson DR, Ellisman MH, Spirou GA. The micro-architecture of mitochondria at active zones: electron tomography reveals novel anchoring scaffolds and cristae structured for high-rate metabolism. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 1015-26. PMID 20089910 DOI: 10.1523/Jneurosci.1517-09.2010  0.325
2010 Altintas I, Lin AW, Chen J, Churas C, Gujral M, Sun S, Li W, Manansala R, Sedova M, Grethe JS, Ellisman M. CAMERA 2.0: A data-centric metagenomics community infrastructure driven by scientific workflows Proceedings - 2010 6th World Congress On Services, Services-1 2010. 352-359. DOI: 10.1109/SERVICES.2010.89  0.557
2010 Altintas I, Chen J, Sedova M, Gupta A, Sun S, Lin AW, Gujral M, Anand MK, Li W, Grethe JS, Ellisman M. Extending the data model for data-centric metagenomics analysis using scientific workflows in CAMERA Proceedings - 6th Ieee International Conference On E-Science Workshops, E-Sciencew 2010. 49-56. DOI: 10.1109/eScienceW.2010.18  0.586
2010 Boassa D, Cone A, Solan J, Smock A, Papas A, Thornton P, Lampe P, Ellisman M, Sosinsky G. Imaging Connexin And Pannexin Trafficking Structures In Situ Microscopy and Microanalysis. 16: 842-843. DOI: 10.1017/S1431927610055479  0.679
2010 Deerinck T, Bushong E, Lev-Ram V, Shu X, Tsien R, Ellisman M. Enhancing Serial Block-Face Scanning Electron Microscopy to Enable High Resolution 3-D Nanohistology of Cells and Tissues Microscopy and Microanalysis. 16: 1138-1139. DOI: 10.1017/S1431927610055170  0.655
2010 Shu X, Lev-Ram V, Gaietta GM, Deerinck TJ, Ramko EB, Davidson MW, Ellisman MH, Tsien R. Genetically Encoded Singlet Oxygen Generator (SOG) Requiring No Exogenous Cofactors Biophysical Journal. 98: 612a. DOI: 10.1016/J.Bpj.2009.12.3338  0.327
2009 Ragsdale EJ, Ngo PT, Crum J, Ellisman MH, Baldwin JG. Comparative, three-dimensional anterior sensory reconstruction of Aphelenchus avenae (nematoda: Tylenchomorpha). The Journal of Comparative Neurology. 517: 616-32. PMID 19824103 DOI: 10.1002/Cne.22170  0.312
2009 Ellisman M, Hutton T, Kirkland A, Lin A, Lin C, Molina T, Peltier S, Singh R, Tang K, Trefethen AE, Wallom DC, Xiong X. The OptIPuter microscopy demonstrator: enabling science through a transatlantic lightpath. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 367: 2645-53. PMID 19487201 DOI: 10.1098/rsta.2009.0058  0.303
2009 Hayashi T, Martone ME, Yu Z, Thor A, Doi M, Holst MJ, Ellisman MH, Hoshijima M. Three-dimensional electron microscopy reveals new details of membrane systems for Ca2+ signaling in the heart. Journal of Cell Science. 122: 1005-13. PMID 19295127 DOI: 10.1242/Jcs.028175  0.643
2009 Shawkey MD, Saranathan V, Pálsdóttir H, Crum J, Ellisman MH, Auer M, Prum RO. Electron tomography, three-dimensional Fourier analysis and colour prediction of a three-dimensional amorphous biophotonic nanostructure. Journal of the Royal Society, Interface / the Royal Society. 6: S213-20. PMID 19158016 DOI: 10.1098/Rsif.2008.0374.Focus  0.329
2009 Bumbarger DJ, Wijeratne S, Carter C, Crum J, Ellisman MH, Baldwin JG. Three-dimensional reconstruction of the amphid sensilla in the microbial feeding nematode, Acrobeles complexus (Nematoda: Rhabditida). The Journal of Comparative Neurology. 512: 271-81. PMID 19003904 DOI: 10.1002/Cne.21882  0.306
2009 Larson S, Aprea C, Maynard S, Imam F, Ellisman M, Martone M. A multi-scale spatial and semantic knowledge framework for neuroanatomy Frontiers in Neuroinformatics. 3. DOI: 10.3389/Conf.Neuro.11.2009.08.015  0.748
2009 Milazzo AC, Lanman J, Bouwer JC, Jin L, Peltier ST, Johnson JE, Kleinfelder S, Xuong NH, Ellisman MH. Advanced detector development for electron microscopy enables new insight into the study of the virus life cycle in cells and alzheimers disease Microscopy and Microanalysis. 15: 8-9. DOI: 10.1017/S1431927609098766  0.71
2008 Marko M, Ellisman M, Medalia O. The 4th International Conference on Electron Tomography. Journal of Structural Biology. 161: 219. PMID 19255594 DOI: 10.1016/J.Jsb.2008.03.001  0.377
2008 Buccigrossi R, Ellisman M, Grethe J, Haselgrove C, Kennedy DN, Martone M, Preuss N, Reynolds K, Sullivan M, Turner J, Wagner K. The Neuroimaging Informatics Tools and Resources Clearinghouse (NITRC). Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1000. PMID 18999128 DOI: 10.3389/Conf.Neuro.11.2008.01.122  0.738
2008 Yu Z, Holst MJ, Hayashi T, Bajaj CL, Ellisman MH, McCammon JA, Hoshijima M. Three-dimensional geometric modeling of membrane-bound organelles in ventricular myocytes: bridging the gap between microscopic imaging and mathematical simulation. Journal of Structural Biology. 164: 304-13. PMID 18835449 DOI: 10.1016/J.Jsb.2008.09.004  0.33
2008 Saini V, Martyshkin DV, Mirov SB, Perez A, Perkins G, Ellisman MH, Towner VD, Wu H, Pereboeva L, Borovjagin A, Curiel DT, Everts M. An adenoviral platform for selective self-assembly and targeted delivery of nanoparticles. Small (Weinheim An Der Bergstrasse, Germany). 4: 262-9. PMID 18200644 DOI: 10.1002/Smll.200700403  0.759
2008 Perkins GA, Sosinsky GE, Ghassemzadeh S, Perez A, Jones Y, Ellisman MH. Electron tomographic analysis of cytoskeletal cross-bridges in the paranodal region of the node of Ranvier in peripheral nerves. Journal of Structural Biology. 161: 469-80. PMID 18096402 DOI: 10.1016/J.Jsb.2007.10.005  0.782
2008 Martone ME, Tran J, Wong WW, Sargis J, Fong L, Larson S, Lamont SP, Gupta A, Ellisman MH. The cell centered database project: an update on building community resources for managing and sharing 3D imaging data. Journal of Structural Biology. 161: 220-31. PMID 18054501 DOI: 10.1016/J.Jsb.2007.10.003  0.79
2008 Jin L, Milazzo AC, Kleinfelder S, Li S, Leblanc P, Duttweiler F, Bouwer JC, Peltier ST, Ellisman MH, Xuong NH. Applications of direct detection device in transmission electron microscopy. Journal of Structural Biology. 161: 352-8. PMID 18054249 DOI: 10.1016/J.Jsb.2007.10.007  0.735
2008 Sosinsky GE, Crum J, Jones YZ, Lanman J, Smarr B, Terada M, Martone ME, Deerinck TJ, Johnson JE, Ellisman MH. The combination of chemical fixation procedures with high pressure freezing and freeze substitution preserves highly labile tissue ultrastructure for electron tomography applications. Journal of Structural Biology. 161: 359-71. PMID 17962040 DOI: 10.1016/J.Jsb.2007.09.002  0.655
2007 Sun MG, Williams J, Munoz-Pinedo C, Perkins GA, Brown JM, Ellisman MH, Green DR, Frey TG. Correlated three-dimensional light and electron microscopy reveals transformation of mitochondria during apoptosis. Nature Cell Biology. 9: 1057-65. PMID 17721514 DOI: 10.1038/Ncb1630  0.329
2007 Toni N, Teng EM, Bushong EA, Aimone JB, Zhao C, Consiglio A, van Praag H, Martone ME, Ellisman MH, Gage FH. Synapse formation on neurons born in the adult hippocampus. Nature Neuroscience. 10: 727-34. PMID 17486101 DOI: 10.1038/Nn1908  0.767
2007 Chang SY, Zagha E, Kwon ES, Ozaita A, Bobik M, Martone ME, Ellisman MH, Heintz N, Rudy B. Distribution of Kv3.3 potassium channel subunits in distinct neuronal populations of mouse brain. The Journal of Comparative Neurology. 502: 953-72. PMID 17444489 DOI: 10.1002/Cne.21353  0.665
2007 Xuong NH, Jin L, Kleinfelder S, Li S, Leblanc P, Duttweiler F, Bouwer JC, Peltier ST, Milazzo AC, Ellisman M. Future directions for camera systems in electron microscopy. Methods in Cell Biology. 79: 721-39. PMID 17327181 DOI: 10.1016/S0091-679X(06)79028-8  0.724
2007 Bouwer JC, Mackey MR, Lawrence A, Deerinck TJ, Jones YZ, Terada M, Martone ME, Peltier ST, Ellisman MH. The application of energy-filtered electron microscopy to tomography of thick, selectively stained biological samples. Methods in Cell Biology. 79: 643-60. PMID 17327179 DOI: 10.1016/S0091-679X(06)79026-4  0.8
2007 Deerinck TJ, Giepmans BN, Smarr BL, Martone ME, Ellisman MH. Light and electron microscopic localization of multiple proteins using quantum dots. Methods in Molecular Biology (Clifton, N.J.). 374: 43-53. PMID 17237528 DOI: 10.1385/1-59745-369-2:43  0.674
2007 Jin L, Milazzo A, Kleinfelder S, Li S, Leblanc P, Duttweiler F, Bouwer JC, Peltier ST, Ellisman M, Xuong N. The Intermediate Size Direct Detection Detector for Electron Microscopy Electronic Imaging. 6501. DOI: 10.1117/12.704329  0.733
2007 Martone M, Price D, Thor A, Terada M, Berlanga M, Memon A, Wong W, Zaslavsky I, Ellisman M. Multiscale Investigation of the Mammalian Nervous System: Imaging and Informatics Microscopy and Microanalysis. 13. DOI: 10.1017/S143192760707715X  0.652
2007 Burette A, Crum J, Martone M, Ellisman M, Weinberg R. The Architecture of the Presynaptic Active Zone Microscopy and Microanalysis. 13. DOI: 10.1017/S1431927607074521  0.643
2007 Lin AW, Peltier ST, Grethe JS, Ellisman MH. Case studies on the use of workflow technologies for scientific analysis: The biomedical informatics research network and the telescience project Workflows For E-Science: Scientific Workflows For Grids. 109-125. DOI: 10.1007/978-1-84628-757-2_8  0.586
2006 Gaietta GM, Giepmans BN, Deerinck TJ, Smith WB, Ngan L, Llopis J, Adams SR, Tsien RY, Ellisman MH. Golgi twins in late mitosis revealed by genetically encoded tags for live cell imaging and correlated electron microscopy. Proceedings of the National Academy of Sciences of the United States of America. 103: 17777-82. PMID 17101980 DOI: 10.1073/pnas.0608509103  0.362
2006 Wilhelmsson U, Bushong EA, Price DL, Smarr BL, Phung V, Terada M, Ellisman MH, Pekny M. Redefining the concept of reactive astrocytes as cells that remain within their unique domains upon reaction to injury. Proceedings of the National Academy of Sciences of the United States of America. 103: 17513-8. PMID 17090684 DOI: 10.1073/Pnas.0602841103  0.631
2006 Chow SK, Hakozaki H, Price DL, MacLean NA, Deerinck TJ, Bouwer JC, Martone ME, Peltier ST, Ellisman MH. Automated microscopy system for mosaic acquisition and processing. Journal of Microscopy. 222: 76-84. PMID 16774516 DOI: 10.1111/J.1365-2818.2006.01577.X  0.791
2006 Bumbarger DJ, Crum J, Ellisman MH, Baldwin JG. Three-dimensional reconstruction of the nose epidermal cells in the microbial feeding nematode, Acrobeles complexus (Nematoda: Rhabditida). Journal of Morphology. 267: 1257-72. PMID 16710857 DOI: 10.1002/Jmor.10456  0.304
2006 Frey TG, Perkins GA, Ellisman MH. Electron tomography of membrane-bound cellular organelles. Annual Review of Biophysics and Biomolecular Structure. 35: 199-224. PMID 16689634 DOI: 10.1146/Annurev.Biophys.35.040405.102039  0.378
2006 Price DL, Chow SK, Maclean NA, Hakozaki H, Peltier S, Martone ME, Ellisman MH. High-resolution large-scale mosaic imaging using multiphoton microscopy to characterize transgenic mouse models of human neurological disorders. Neuroinformatics. 4: 65-80. PMID 16595859 DOI: 10.1385/Ni:4:1:65  0.677
2006 Lawrence A, Bouwer JC, Perkins G, Ellisman MH. Transform-based backprojection for volume reconstruction of large format electron microscope tilt series. Journal of Structural Biology. 154: 144-67. PMID 16542854 DOI: 10.1016/J.Jsb.2005.12.012  0.724
2006 Li S, Bouwer J, Duttweiler F, Ellisman M, Jin L, Leblanc P, Milazzo A, Peltier S, Xuong N, Kleinfelder S. A new direct detection camera system for electron microscopy Proceedings of Spie - the International Society For Optical Engineering. 6068. DOI: 10.1117/12.650673  0.744
2006 Astakhov V, Gupta A, Grethe JS, Ross E, Little D, Yilmaz A, Qian X, Santini S, Martone M, Ellisman M. Semantically based data integration environment for biomedical research Proceedings - Ieee Symposium On Computer-Based Medical Systems. 2006: 171-176. DOI: 10.1109/CBMS.2006.143  0.738
2006 Singh R, Schwarz N, Taesombut N, Lee D, Jeong B, Renambot L, Lin AW, West R, Otsuka H, Naito S, Peltier ST, Martone ME, Nozaki K, Leigh J, Ellisman MH. Real-time multi-scale brain data acquisition, assembly, and analysis using an end-to-end OptIPuter Future Generation Computer Systems. 22: 1032-1039. DOI: 10.1016/J.Future.2006.03.017  0.676
2005 Ouyang Y, Wong M, Capani F, Rensing N, Lee CS, Liu Q, Neusch C, Martone ME, Wu JY, Yamada K, Ellisman MH, Choi DW. Transient decrease in F-actin may be necessary for translocation of proteins into dendritic spines. The European Journal of Neuroscience. 22: 2995-3005. PMID 16367766 DOI: 10.1111/J.1460-9568.2005.04521.X  0.647
2005 Giepmans BN, Deerinck TJ, Smarr BL, Jones YZ, Ellisman MH. Correlated light and electron microscopic imaging of multiple endogenous proteins using Quantum dots. Nature Methods. 2: 743-9. PMID 16179920 DOI: 10.1038/nmeth791  0.342
2005 Coggan JS, Bartol TM, Esquenazi E, Stiles JR, Lamont S, Martone ME, Berg DK, Ellisman MH, Sejnowski TJ. Evidence for ectopic neurotransmission at a neuronal synapse. Science (New York, N.Y.). 309: 446-51. PMID 16020730 DOI: 10.1126/Science.1108239  0.664
2005 Grethe JS, Baru C, Gupta A, James M, Ludaescher B, Martone ME, Papadopoulos PM, Peltier ST, Rajasekar A, Santini S, Zaslavsky IN, Ellisman MH. Biomedical informatics research network: building a national collaboratory to hasten the derivation of new understanding and treatment of disease. Studies in Health Technology and Informatics. 112: 100-9. PMID 15923720  0.725
2005 Milazzo AC, Leblanc P, Duttweiler F, Jin L, Bouwer JC, Peltier S, Ellisman M, Bieser F, Matis HS, Wieman H, Denes P, Kleinfelder S, Xuong NH. Active pixel sensor array as a detector for electron microscopy. Ultramicroscopy. 104: 152-9. PMID 15890445 DOI: 10.1016/J.Ultramic.2005.03.006  0.726
2005 Wilhelmsson U, Li L, Pekna M, Berthold CH, Blom S, Eliasson C, Renner O, Bushong E, Ellisman M, Morgan TE, Pekny M. Absence of glial fibrillary acidic protein and vimentin prevents hypertrophy of astrocytic processes and improves post-traumatic regeneration. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 24: 5016-21. PMID 15163694 DOI: 10.1523/Jneurosci.0820-04.2004  0.613
2005 Bouwer JC, Peltier ST, Jin L, Khodjasaryan K, Geist S, Xuong NH, Ellisman MH. Analysis of the performance of an 8k x 8k lens coupled detector for wide-field, high-resolution transmission electron microscopy (TEM) Microscopy and Microanalysis. 11: 62-63. DOI: 10.1017/S1431927605510250  0.714
2005 Peltier ST, Bouwer JC, Jin L, Khodjasaryan K, Geist S, Xuong N, Ellisman MH. Design of a New 8k x 8k Lens Coupled Detector for Wide-field, High-resolution Transmission Electron Microscopy Microscopy and Microanalysis. 11. DOI: 10.1017/S1431927605510249  0.712
2005 Xuong NH, Milazzo AC, Peltier S, Leblanc P, Duttweiler F, Jin L, Bouwer JC, Peltier S, Ellisman M, Kleinfelder S. A New Type of Detector for Electron Microscopy Microscopy and Microanalysis. 11. DOI: 10.1017/S1431927605510213  0.723
2004 Bouwer JC, Mackey MR, Lawrence A, Deerinck TJ, Jones YZ, Terada M, Martone ME, Peltier S, Ellisman MH. Automated most-probable loss tomography of thick selectively stained biological specimens with quantitative measurement of resolution improvement. Journal of Structural Biology. 148: 297-306. PMID 15522778 DOI: 10.1016/J.Jsb.2004.08.005  0.797
2004 Bobik M, Ellisman MH, Rudy B, Martone ME. Potassium channel subunit Kv3.2 and the water channel aquaporin-4 are selectively localized to cerebellar pinceau. Brain Research. 1026: 168-78. PMID 15488478 DOI: 10.1016/J.Brainres.2004.07.088  0.664
2004 Martone ME, Gupta A, Ellisman MH. E-neuroscience: challenges and triumphs in integrating distributed data from molecules to brains. Nature Neuroscience. 7: 467-72. PMID 15114360 DOI: 10.1038/Nn1229  0.661
2004 Bushong EA, Martone ME, Ellisman MH. Maturation of astrocyte morphology and the establishment of astrocyte domains during postnatal hippocampal development. International Journal of Developmental Neuroscience : the Official Journal of the International Society For Developmental Neuroscience. 22: 73-86. PMID 15036382 DOI: 10.1016/J.Ijdevneu.2003.12.008  0.76
2004 Ju W, Morishita W, Tsui J, Gaietta G, Deerinck TJ, Adams SR, Garner CC, Tsien RY, Ellisman MH, Malenka RC. Activity-dependent regulation of dendritic synthesis and trafficking of AMPA receptors. Nature Neuroscience. 7: 244-53. PMID 14770185 DOI: 10.1038/nn1189  0.308
2004 Xuong N, Milazzo A, LeBlanc P, Duttweiler F, Bouwer J, Peltier S, Ellisman M, Denes P, Bieser F, Matis HS, Wieman H, Kleinfelder S. First use of a high sensitivity active pixel sensor array as a detector for electron microscopy Electronic Imaging. 5301: 242-249. DOI: 10.1117/12.526021  0.728
2004 Bouwer JC, Mackey M, Lawrence A, Deerinck TJ, Jones Y, Terada M, Martone ME, Peltier S, Ellisman MH. Automated energy filtered most probable loss tomography of thick selectively stained biological samples Microscopy and Microanalysis. 10: 1208-1209. DOI: 10.1017/S1431927604887762  0.761
2004 Price DL, Chow SK, Hakozaki H, Phung V, Smarr B, Peltier S, Martone ME, Ellisman MH. Application of a multi-photon high-resolution large-scale montage imaging technique to characterize transgenic mouse models of human neurodisorders Microscopy and Microanalysis. 10: 1482-1483. DOI: 10.1017/S1431927604886586  0.65
2003 Martone ME, Zhang S, Gupta A, Qian X, He H, Price DL, Wong M, Santini S, Ellisman MH. The cell-centered database: a database for multiscale structural and protein localization data from light and electron microscopy. Neuroinformatics. 1: 379-95. PMID 15043222 DOI: 10.1385/Ni:1:4:379  0.671
2003 Sosinsky GE, Gaietta GM, Hand G, Deerinck TJ, Han A, Mackey M, Adams SR, Bouwer J, Tsien RY, Ellisman MH. Tetracysteine genetic tags complexed with biarsenical ligands as a tool for investigating gap junction structure and dynamics. Cell Communication & Adhesion. 10: 181-6. PMID 14681013 DOI: 10.1080/Cac.10.4-6.181.186  0.733
2003 Mironov AA, Mironov AA, Beznoussenko GV, Trucco A, Lupetti P, Smith JD, Geerts WJ, Koster AJ, Burger KN, Martone ME, Deerinck TJ, Ellisman MH, Luini A. ER-to-Golgi carriers arise through direct en bloc protrusion and multistage maturation of specialized ER exit domains. Developmental Cell. 5: 583-94. PMID 14536060 DOI: 10.1016/S1534-5807(03)00294-6  0.659
2003 Bushong EA, Martone ME, Ellisman MH. Examination of the relationship between astrocyte morphology and laminar boundaries in the molecular layer of adult dentate gyrus. The Journal of Comparative Neurology. 462: 241-51. PMID 12794746 DOI: 10.1002/Cne.10728  0.747
2003 Peltier S, Bouwer JC, Xuong NH, Ellisman MH. High performance digital imaging for transmission electron microscopy Microscopy and Microanalysis. 9: 1566-1567. DOI: 10.1017/S1431927603447831  0.739
2003 Peltier S, Bouwer J, Xuong N, Ellisman MH. High Performance Digital Imaging for Transmission Electron Microscopy Microscopy and Microanalysis. 9: 1566-1567. DOI: 10.1017/s1431927603447831  0.721
2003 Zhang S, Price D, Qian X, Gupta A, Wong M, Ellisman M, Martone M. A Cell Centered Database (CCDB) for Multi-Scale Microscopy Data Management Microscopy and Microanalysis. 9: 1502-1503. DOI: 10.1017/S143192760344751X  0.643
2003 Martone ME, Zhang S, Peltier S, Lin AW, Lee D, Molina T, Gupta A, Ellisman MH. Informatics Resources for Electron Tomography Microscopy and Microanalysis. 9: 1164-1165. DOI: 10.1017/S1431927603445820  0.643
2002 Lenzi D, Crum J, Ellisman MH, Roberts WM. Depolarization redistributes synaptic membrane and creates a gradient of vesicles on the synaptic body at a ribbon synapse. Neuron. 36: 649-59. PMID 12441054 DOI: 10.1016/S0896-6273(02)01025-5  0.707
2002 Martone ME, Gupta A, Wong M, Qian X, Sosinsky G, Ludäscher B, Ellisman MH. A cell-centered database for electron tomographic data. Journal of Structural Biology. 138: 145-55. PMID 12160711 DOI: 10.1016/S1047-8477(02)00006-0  0.674
2002 Ozaita A, Martone ME, Ellisman MH, Rudy B. Differential subcellular localization of the two alternatively spliced isoforms of the Kv3.1 potassium channel subunit in brain. Journal of Neurophysiology. 88: 394-408. PMID 12091563 DOI: 10.1152/Jn.2002.88.1.394  0.658
2002 Gaietta G, Deerinck TJ, Adams SR, Bouwer J, Tour O, Laird DW, Sosinsky GE, Tsien RY, Ellisman MH. Multicolor and electron microscopic imaging of connexin trafficking. Science (New York, N.Y.). 296: 503-7. PMID 11964472 DOI: 10.1126/Science.1068793  0.744
2002 Shoop RD, Esquenazi E, Yamada N, Ellisman MH, Berg DK. Ultrastructure of a somatic spine mat for nicotinic signaling in neurons. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 22: 748-56. PMID 11826104 DOI: 10.1523/Jneurosci.22-03-00748.2002  0.308
2002 Bushong EA, Martone ME, Jones YZ, Ellisman MH. Protoplasmic astrocytes in CA1 stratum radiatum occupy separate anatomical domains. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 22: 183-92. PMID 11756501 DOI: 10.1523/Jneurosci.22-01-00183.2002  0.77
2001 Perkins GA, Renken CW, Frey TG, Ellisman MH. Membrane architecture of mitochondria in neurons of the central nervous system. Journal of Neuroscience Research. 66: 857-65. PMID 11746412 DOI: 10.1002/Jnr.10050  0.303
2001 Capani F, Ellisman MH, Martone ME. Filamentous actin is concentrated in specific subpopulations of neuronal and glial structures in rat central nervous system. Brain Research. 923: 1-11. PMID 11743966 DOI: 10.1016/S0006-8993(01)03189-4  0.643
2001 Perkins GA, Wang L, Huang LJ, Humphries K, Yao VJ, Martone M, Deerinck TJ, Barraclough DM, Violin JD, Smith D, Newton A, Scott JD, Taylor SS, Ellisman MH. PKA, PKC, and AKAP localization in and around the neuromuscular junction. Bmc Neuroscience. 2: 17. PMID 11716788 DOI: 10.1186/1471-2202-2-17  0.645
2001 Capani F, Deerinck TJ, Ellisman MH, Bushong E, Bobik M, Martone ME. Phalloidin-eosin followed by photo-oxidation: a novel method for localizing F-actin at the light and electron microscopic levels. The Journal of Histochemistry and Cytochemistry : Official Journal of the Histochemistry Society. 49: 1351-61. PMID 11668188 DOI: 10.1177/002215540104901103  0.769
2001 Capani F, Martone ME, Deerinck TJ, Ellisman MH. Selective localization of high concentrations of F-actin in subpopulations of dendritic spines in rat central nervous system: a three-dimensional electron microscopic study. The Journal of Comparative Neurology. 435: 156-70. PMID 11391638 DOI: 10.1002/Cne.1199  0.643
2001 Perkins GA, Renken CW, van der Klei IJ, Ellisman MH, Neupert W, Frey TG. Electron tomography of mitochondria after the arrest of protein import associated with Tom19 depletion. European Journal of Cell Biology. 80: 139-50. PMID 11302518 DOI: 10.1078/0171-9335-00149  0.308
2001 Hand GM, Martone ME, Stelljes A, Ellisman MH, Sosinsky GE. Specific labeling of connexin43 in NRK cells using tyramide-based signal amplification and fluorescence photooxidation. Microscopy Research and Technique. 52: 331-43. PMID 11180624 DOI: 10.1002/1097-0029(20010201)52:3<331::Aid-Jemt1017>3.0.Co;2-H  0.643
2001 Bobik M, Capani F, Martone ME, Ellisman M. Novel Molecular Specializations of the Pinceau in Rat Cerebellum as Revealed by Correlated Confocal Microscopy and Electron Tomography Microscopy and Microanalysis. 7: 96-97. DOI: 10.1017/S1431927600026556  0.643
2001 Martone ME, Peltier S, Lamont S, Gupta A, Ludaescher B, Khetani S, Molina T, Ellisman MH. Increasing Access to Tomographic Resources: Web-based Telemicroscopy and Database Microscopy and Microanalysis. 7: 92-93. DOI: 10.1017/S1431927600026532  0.615
2001 Stelljes A, Bushong EA, Martone ME, Wiseman PW, Hood KL, Mayford M, Ellisman MH. Study of Distribution and Transport Events of the GluR1 AMPA Receptor: Combination of Genetically Modified Receptors and Multi-Resolution Microscopy Microscopy and Microanalysis. 7: 40-41. DOI: 10.1017/S1431927600026271  0.743
2001 Wiseman PW, Bouwer JC, Peltier S, Ellisman MH. High Speed Two Photon Excitation Microscopy in Live Cell Imaging using Image Correlation Spectroscopy (ICS) Microscopy and Microanalysis. 7: 22-23. DOI: 10.1017/S1431927600026180  0.72
2000 Martone ME, Hu BR, Ellisman MH. Alterations of hippocampal postsynaptic densities following transient ischemia. Hippocampus. 10: 610-6. PMID 11075832 DOI: 10.1002/1098-1063(2000)10:5<610::Aid-Hipo12>3.0.Co;2-E  0.643
2000 Takaoka A, Yoshida K, Mori H, Hayashi S, Young SJ, Ellisman MH. International telemicroscopy with a 3 MV ultrahigh voltage electron microscope. Ultramicroscopy. 83: 93-101. PMID 10805395 DOI: 10.1016/S0304-3991(99)00172-2  0.309
2000 Martone ME, Deerinck TJ, Yamada N, Bushong E, Ellisman MH. Correlated 3D Light and Electron Microscopy: Use of High Voltage Electron Microscopy and Electron Tomography for Imaging Large Biological Structures Journal of Histotechnology. 23: 261-270. DOI: 10.1179/His.2000.23.3.261  0.787
1999 Ellisman M, Martone M. Stephen j. young (1938-1999) Journal of Structural Biology. 125: 253. PMID 10222282 DOI: 10.1006/Jsbi.1999.4099  0.643
1999 Hu BR, Fux CM, Martone ME, Zivin JA, Ellisman MH. Persistent phosphorylation of cyclic AMP responsive element-binding protein and activating transcription factor-2 transcription factors following transient cerebral ischemia in rat brain. Neuroscience. 89: 437-52. PMID 10077326 DOI: 10.1016/S0306-4522(98)00352-2  0.643
1999 Martone ME, Jones YZ, Young SJ, Ellisman MH, Zivin JA, Hu BR. Modification of postsynaptic densities after transient cerebral ischemia: a quantitative and three-dimensional ultrastructural study. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 19: 1988-97. PMID 10066252 DOI: 10.1523/Jneurosci.19-06-01988.1999  0.667
1999 Martone ME, Edelmann VM, Ellisman MH, Nef P. Cellular and subcellular distribution of the calcium-binding protein NCS-1 in the central nervous system of the rat. Cell and Tissue Research. 295: 395-407. PMID 10022960 DOI: 10.1007/S004410051246  0.643
1999 Shoop RD, Martone ME, Yamada N, Ellisman MH, Berg DK. Neuronal acetylcholine receptors with alpha7 subunits are concentrated on somatic spines for synaptic signaling in embryonic chick ciliary ganglia. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 19: 692-704. PMID 9880590 DOI: 10.1523/Jneurosci.19-02-00692.1999  0.659
1999 Lenzi D, Runyeon JW, Crum J, Ellisman MH, Roberts WM. Synaptic vesicle populations in saccular hair cells reconstructed by electron tomography. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 19: 119-32. PMID 9870944 DOI: 10.1523/Jneurosci.19-01-00119.1999  0.716
1999 Martone ME, Deerinck TJ, Young SJ, Ellisman MH. Three Dimensional Protein Localization Using High Voltage Electron Microscopy. Acta Histochemica Et Cytochemica. 32: 35-43. DOI: 10.1267/Ahc.32.35  0.686
1999 Bushong E, Martone ME, Foster C, Ellisman MH. Effectiveness Of Immunolabeling Gfap For Estimating Astrocytic Shape And Volume Microscopy and Microanalysis. 5: 1340-1341. DOI: 10.1017/S143192760002002X  0.734
1999 Shoop R, Martone M, Yamada N, Ellisman M, Berg D. Localization of Nicotinic Acetylcholine Receptors on Somatic Spines of Chick Ciliary Ganglion Neurons Microscopy and Microanalysis. 5: 1028-1029. DOI: 10.1017/S1431927600018468  0.643
1999 Capani F, Martone ME, Deerinck TJ, Ellisman MH. Localization of Actin Filaments in the Central Nervous System Using Phalloidin and Correlative Light and Electron Microscopy Microscopy and Microanalysis. 5: 498-499. DOI: 10.1017/S1431927600015816  0.643
1998 Martone ME, Pollock JA, Ellisman MH. Subcellular localization of mRNA in neuronal cells. Contributions of high-resolution in situ hybridization techniques. Molecular Neurobiology. 18: 227-46. PMID 10206470 DOI: 10.1007/Bf02741301  0.678
1998 Fan GY, Datte P, Beuville E, Beche JF, Millaud J, Downing KH, Burkard FT, Ellisman MH, Xuong NH. ASIC-based event-driven 2D digital electron counter for TEM imaging. Ultramicroscopy. 70: 107-13. PMID 9499588 DOI: 10.1016/S0304-3991(97)00109-5  0.307
1998 Hu BR, Park M, Martone ME, Fischer WH, Ellisman MH, Zivin JA. Assembly of proteins to postsynaptic densities after transient cerebral ischemia. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 18: 625-33. PMID 9425004 DOI: 10.1523/Jneurosci.18-02-00625.1998  0.643
1998 Sosinsky G, Martone M, Handel G, Musil L, Ellisman M. Correlative Confocal and Electron Microscopy of the Connexin43 Gap Junction Protein in NRK Cells: Balancing Fixation Conditions, Cell Permeabilization, Antigen-Antibody Interaction and Cell Ultrastructure. Microscopy and Microanalysis. 4: 450-451. DOI: 10.1017/S1431927600022376  0.643
1998 Lenzi D, Runyeon JW, Crum J, Ellisman MH, Roberts WM. Tomographic Reconstruction of the Hair Cell Ribbon Synapse Microscopy and Microanalysis. 4: 426-427. DOI: 10.1017/S143192760002225X  0.702
1997 Perkins GA, Renken CW, Song JY, Frey TG, Young SJ, Lamont S, Martone ME, Lindsey S, Ellisman MH. Electron tomography of large, multicomponent biological structures. Journal of Structural Biology. 120: 219-27. PMID 9441927 DOI: 10.1006/Jsbi.1997.3920  0.675
1997 Ouyang Y, Martone ME, Deerinck TJ, Airey JA, Sutko JL, Ellisman MH. Differential distribution and subcellular localization of ryanodine receptor isoforms in the chicken cerebellum during development. Brain Research. 775: 52-62. PMID 9439828 DOI: 10.1016/S0006-8993(97)00840-8  0.643
1997 Martone ME, Holash JA, Bayardo A, Pasquale EB, Ellisman MH. Immunolocalization of the receptor tyrosine kinase EphA4 in the adult rat central nervous system. Brain Research. 771: 238-50. PMID 9401744 DOI: 10.1016/S0006-8993(97)00792-0  0.658
1997 Sekirnjak C, Martone ME, Weiser M, Deerinck T, Bueno E, Rudy B, Ellisman M. Subcellular localization of the K+ channel subunit Kv3.1b in selected rat CNS neurons. Brain Research. 766: 173-87. PMID 9359601 DOI: 10.1016/S0006-8993(97)00527-1  0.669
1997 Perkins G, Renken C, Martone ME, Young SJ, Ellisman M, Frey T. Electron tomography of neuronal mitochondria: three-dimensional structure and organization of cristae and membrane contacts. Journal of Structural Biology. 119: 260-72. PMID 9245766 DOI: 10.1006/Jsbi.1997.3885  0.663
1997 Martone ME, Alba SA, Edelman VM, Airey JA, Ellisman MH. Distribution of inositol-1,4,5-trisphosphate and ryanodine receptors in rat neostriatum. Brain Research. 756: 9-21. PMID 9187309 DOI: 10.1016/S0006-8993(96)01430-8  0.643
1997 Perkins G, Renken C, Young S, Lindsey S, Ellisman M, Frey T. Use of High-Performance Computing Algorithms in Combination With Parallel Computing for Tomography Microscopy and Microanalysis. 3: 1123-1124. DOI: 10.1017/S1431927600012502  0.338
1997 Ellisman MH, Young SJ, Fan GY, Perkins G, Lamont S, Martone ME. Highlights of Selected Microscopy Research Resource Activities at San Diego Microscopy and Microanalysis. 3: 275-276. DOI: 10.1017/S1431927600008266  0.631
1997 Martone ME, Edelman VM, Thor A, Young SJ, Lamont SP, Ross J, Ellisman MH. Three-Dimensional Analysis of Tranverse Tubules in Normal and Failing Heart: A Combined Confocal and High Voltage Electron Microscope Study Microscopy and Microanalysis. 3: 231-232. DOI: 10.1017/S1431927600008047  0.659
1996 Knowles RB, Sabry JH, Martone ME, Deerinck TJ, Ellisman MH, Bassell GJ, Kosik KS. Translocation of RNA granules in living neurons. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 16: 7812-20. PMID 8987809 DOI: 10.1523/Jneurosci.16-24-07812.1996  0.653
1996 Martone ME, Pollock JA, Jones YZ, Ellisman MH. Ultrastructural localization of dendritic messenger RNA in adult rat hippocampus. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 16: 7437-46. PMID 8922399 DOI: 10.1523/Jneurosci.16-23-07437.1996  0.666
1996 Schaad NC, De Castro E, Nef S, Hegi S, Hinrichsen R, Martone ME, Ellisman MH, Sikkink R, Rusnak F, Sygush J, Nef P. Direct modulation of calmodulin targets by the neuronal calcium sensor NCS-1. Proceedings of the National Academy of Sciences of the United States of America. 93: 9253-8. PMID 8799187 DOI: 10.1073/Pnas.93.17.9253  0.643
1996 Fan G, Young S, Deerinck T, Ellisman M. A New Electron-Optical Mode for High Contrast Imaging and Online Stereo Observation in TEM Microscopy and Microanalysis. 2: 137-146. DOI: 10.1017/S1431927696211377  0.333
1995 Weiser M, Bueno E, Sekirnjak C, Martone ME, Baker H, Hillman D, Chen S, Thornhill W, Ellisman M, Rudy B. The potassium channel subunit KV3.1b is localized to somatic and axonal membranes of specific populations of CNS neurons. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 15: 4298-314. PMID 7790912 DOI: 10.1523/Jneurosci.15-06-04298.1995  0.655
1995 Fan GY, Young SJ, Miller P, Ellisman MH. Conditions for electron tomographic data acquisition. Journal of Electron Microscopy. 44: 15-21. PMID 7751829 DOI: 10.1093/Oxfordjournals.Jmicro.A051139  0.315
1995 Luznik L, Martone ME, Kraus G, Zhang Y, Xu Y, Ellisman MH, Wong-Staal F. Localization of human immunodeficiency virus Rev in transfected and virus-infected cells. Aids Research and Human Retroviruses. 11: 795-804. PMID 7546906 DOI: 10.1089/Aid.1995.11.795  0.642
1995 Weiser M, Bueno E, Sekirnjak C, Martone M, Baker H, Hillman D, Chen S, Thornhill W, Ellisman M, Rudy B. The potassium channel subunit KV3.1b is localized to somatic and axonal membranes of specific populations of CNS neurons The Journal of Neuroscience. 15: 4298-4314. DOI: 10.1523/JNEUROSCI.15-06-04298.1995  0.613
1994 Soto GE, Young SJ, Martone ME, Deerinck TJ, Lamont S, Carragher BO, Hama K, Ellisman MH. Serial section electron tomography: a method for three-dimensional reconstruction of large structures. Neuroimage. 1: 230-43. PMID 9343574 DOI: 10.1006/Nimg.1994.1008  0.669
1994 Deerinck TJ, Martone ME, Lev-Ram V, Green DP, Tsien RY, Spector DL, Huang S, Ellisman MH. Fluorescence photooxidation with eosin: a method for high resolution immunolocalization and in situ hybridization detection for light and electron microscopy. The Journal of Cell Biology. 126: 901-10. PMID 7519623 DOI: 10.1083/Jcb.126.4.901  0.676
1993 Martone ME, Zhang Y, Simpliciano VM, Carragher BO, Ellisman MH. Three-dimensional visualization of the smooth endoplasmic reticulum in Purkinje cell dendrites. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 13: 4636-46. PMID 8229189 DOI: 10.1523/Jneurosci.13-11-04636.1993  0.643
1992 Hessler D, Young SJ, Carragher BO, Martone ME, Lamont S, Whittaker M, Milligan RA, Masliah E, Hinshaw JE, Ellisman MH. Programs for visualization in three-dimensional microscopy. Neuroimage. 1: 55-67. PMID 9343557 DOI: 10.1016/1053-8119(92)90007-A  0.669
1992 Masliah E, Ellisman M, Carragher B, Mallory M, Young S, Hansen L, DeTeresa R, Terry RD. Three-dimensional analysis of the relationship between synaptic pathology and neuropil threads in Alzheimer disease. Journal of Neuropathology and Experimental Neurology. 51: 404-14. PMID 1619440 DOI: 10.1097/00005072-199207000-00003  0.306
1992 Pasquale EB, Deerinck TJ, Singer SJ, Ellisman MH. Cek5, a membrane receptor-type tyrosine kinase, is in neurons of the embryonic and postnatal avian brain. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 12: 3956-67. PMID 1403093 DOI: 10.1523/Jneurosci.12-10-03956.1992  0.311
1991 Walton PD, Airey JA, Sutko JL, Beck CF, Mignery GA, Südhof TC, Deerinck TJ, Ellisman MH. Ryanodine and inositol trisphosphate receptors coexist in avian cerebellar Purkinje neurons. The Journal of Cell Biology. 113: 1145-57. PMID 1645737 DOI: 10.1083/Jcb.113.5.1145  0.301
1989 Fields RD, Le Beau JM, Longo FM, Ellisman MH. Nerve regeneration through artificial tubular implants. Progress in Neurobiology. 33: 87-134. PMID 2678271 DOI: 10.1016/0301-0082(89)90036-1  0.601
1988 Fields RD, Ellisman MH. Functionally significant plasticity of synaptic morphology: studies on the ribbon synapse of the ampullae of Lorenzini. Neuroscience. 25: 705-20. PMID 3399063 DOI: 10.1016/0306-4522(88)90271-0  0.567
1987 Fields RD, Ellisman MH, Waxman SG. Changes in synaptic morphology associated with presynaptic and postsynaptic activity: an in vitro study of the electrosensory organ of the thornback ray. Synapse (New York, N.Y.). 1: 335-46. PMID 2901790 DOI: 10.1002/syn.890010407  0.568
1986 Fields RD, Ellisman MH. Axons regenerated through silicone tube splices. II. Functional morphology. Experimental Neurology. 92: 61-74. PMID 3956659 DOI: 10.1016/0014-4886(86)90125-1  0.543
1986 Fields RD, Ellisman MH. Axons regenerated through silicone tube splices. I. Conduction properties. Experimental Neurology. 92: 48-60. PMID 3956658 DOI: 10.1016/0014-4886(86)90124-X  0.535
1985 Fields RD, Ellisman MH. Synaptic morphology and differences in sensitivity. Science (New York, N.Y.). 228: 197-9. PMID 3975637 DOI: 10.1126/Science.3975637  0.578
1985 Lindsey JD, Ellisman MH. The neuronal endomembrane system. I. Direct links between rough endoplasmic reticulum and the cis element of the Golgi apparatus. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 5: 3111-23. PMID 3878393 DOI: 10.1523/Jneurosci.05-12-03111.1985  0.32
1982 Ellisman MH, Agnew WS, Miller JA, Levinson SR. Electron microscopic visualization of the tetrodotoxin-binding protein from Electrophorus electricus. Proceedings of the National Academy of Sciences of the United States of America. 79: 4461-5. PMID 6289303 DOI: 10.1073/PNAS.79.14.4461  0.302
1980 Wiley CA, Ellisman MH. Rows of dimeric-particles within the axolemma and juxtaposed particles within glia, incorporated into a new model for the paranodal glial-axonal junction at the node of Ranvier. The Journal of Cell Biology. 84: 261-80. PMID 7380883 DOI: 10.1083/JCB.84.2.261  0.503
1980 Ellisman MH, Porter KR. Microtrabecular structure of the axoplasmic matrix: Visualization of cross-linking structures and their distribution Journal of Cell Biology. 87: 464-479. PMID 6159361 DOI: 10.1083/JCB.87.2.464  0.595
1976 Ellisman MH, Rash JE, Staehelin LA, Porter KR. Studies of excitable membranes. II. A comparison of specializations at neuromuscular junctions and nonjunctional sarcolemmas of mammalian fast and slow twitch muscle fibers Journal of Cell Biology. 68: 752-774. PMID 1030710 DOI: 10.1083/jcb.68.3.752  0.572
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