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Michael R. DeWeese, Ph.D. - Publications

Affiliations: 
Helen Wills Neuroscience Institute & Dept. of Physics University of California, Berkeley, Berkeley, CA, United States 
Area:
Auditory Cortex
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57 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Frim AG, DeWeese MR. Geometric Bound on the Efficiency of Irreversible Thermodynamic Cycles. Physical Review Letters. 128: 230601. PMID 35749204 DOI: 10.1103/PhysRevLett.128.230601  0.759
2022 Frim AG, DeWeese MR. Optimal finite-time Brownian Carnot engine. Physical Review. E. 105: L052103. PMID 35706186 DOI: 10.1103/PhysRevE.105.L052103  0.764
2022 Wadia NS, Zarcone RV, DeWeese MR. Solution to the Fokker-Planck equation for slowly driven Brownian motion: Emergent geometry and a formula for the corresponding thermodynamic metric. Physical Review. E. 105: 034130. PMID 35428124 DOI: 10.1103/PhysRevE.105.034130  0.772
2021 Frye CG, Simon J, Wadia NS, Ligeralde A, DeWeese MR, Bouchard KE. Critical Point-Finding Methods Reveal Gradient-Flat Regions of Deep Network Losses. Neural Computation. 33: 1469-1497. PMID 34496389 DOI: 10.1162/neco_a_01388  0.749
2021 Frim AG, Zhong A, Chen SF, Mandal D, DeWeese MR. Engineered swift equilibration for arbitrary geometries. Physical Review. E. 103: L030102. PMID 33862711 DOI: 10.1103/PhysRevE.103.L030102  0.765
2020 Sachdeva PS, Livezey JA, DeWeese MR. Heterogeneous Synaptic Weighting Improves Neural Coding in the Presence of Common Noise. Neural Computation. 1-38. PMID 32433901 DOI: 10.1162/neco_a_01287  0.772
2019 Kang L, DeWeese MR. Replay as wavefronts and theta sequences as bump oscillations in a grid cell attractor network. Elife. 8. PMID 31736462 DOI: 10.7554/Elife.46351  0.759
2019 Dodds EM, DeWeese MR. On the Sparse Structure of Natural Sounds and Natural Images: Similarities, Differences, and Implications for Neural Coding. Frontiers in Computational Neuroscience. 13: 39. PMID 31293408 DOI: 10.3389/fncom.2019.00039  0.671
2019 Fang MY, Manipatruni S, Wierzynski C, Khosrowshahi A, DeWeese MR. Design of optical neural networks with component imprecisions. Optics Express. 27: 14009-14029. PMID 31163856 DOI: 10.1364/Oe.27.014009  0.751
2019 Insanally MN, Carcea I, Field RE, Rodgers CC, DePasquale B, Rajan K, DeWeese MR, Albanna BF, Froemke RC. Spike-timing-dependent ensemble encoding by non-classically responsive cortical neurons. Elife. 8. PMID 30688649 DOI: 10.7554/Elife.42409  0.783
2019 Kang L, DeWeese MR. Author response: Replay as wavefronts and theta sequences as bump oscillations in a grid cell attractor network Elife. DOI: 10.7554/Elife.46351.Sa2  0.747
2019 Insanally MN, Carcea I, Field RE, Rodgers CC, DePasquale B, Rajan K, DeWeese MR, Albanna BF, Froemke RC. Author response: Spike-timing-dependent ensemble encoding by non-classically responsive cortical neurons Elife. DOI: 10.7554/Elife.42409.029  0.774
2018 Mandal D, Klymko K, DeWeese MR. Mandal, Klymko, and DeWeese Reply. Physical Review Letters. 121: 139802. PMID 30312081 DOI: 10.1103/Physrevlett.121.139802  0.467
2017 Albanna BF, Hillar C, Sohl-Dickstein J, DeWeese MR. Minimum and Maximum Entropy Distributions for Binary Systems with Known Means and Pairwise Correlations. Entropy (Basel, Switzerland). 19. PMID 33535369 DOI: 10.3390/E19080427  0.769
2017 Mandal D, Klymko K, DeWeese MR. Entropy Production and Fluctuation Theorems for Active Matter. Physical Review Letters. 119: 258001. PMID 29303303 DOI: 10.1103/Physrevlett.119.258001  0.56
2016 Mandal D, DeWeese MR. Nonequilibrium work energy relation for non-Hamiltonian dynamics. Physical Review. E. 93: 042129. PMID 27176276 DOI: 10.1103/Physreve.93.042129  0.54
2016 Mandal D, Deweese MR. Nonequilibrium work energy relation for non-Hamiltonian dynamics Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 93. DOI: 10.1103/PhysRevE.93.042129  0.487
2015 Zulkowski PR, DeWeese MR. Optimal control of overdamped systems. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 92: 032117. PMID 26465436 DOI: 10.1103/PhysRevE.92.032117  0.784
2015 Zulkowski PR, DeWeese MR. Optimal protocols for slowly driven quantum systems. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 92: 032113. PMID 26465432 DOI: 10.1103/PhysRevE.92.032113  0.772
2015 Marzen SE, DeWeese MR, Crutchfield JP. Time resolution dependence of information measures for spiking neurons: scaling and universality. Frontiers in Computational Neuroscience. 9: 105. PMID 26379538 DOI: 10.3389/fncom.2015.00105  0.713
2015 Carels VM, DeWeese MR. Rats Exert Executive Control. Neuron. 86: 1324-6. PMID 26087159 DOI: 10.1016/j.neuron.2015.06.004  0.765
2015 Sohl-Dickstein J, Teng S, Gaub BM, Rodgers CC, Li C, DeWeese MR, Harper NS. A Device for Human Ultrasonic Echolocation. Ieee Transactions On Bio-Medical Engineering. 62: 1526-34. PMID 25608301 DOI: 10.1109/Tbme.2015.2393371  0.727
2015 Carels VM, DeWeese MR. Rats Exert Executive Control Neuron. 86: 1324-1326. DOI: 10.1016/j.neuron.2015.06.004  0.767
2014 Zulkowski PR, DeWeese MR. Optimal finite-time erasure of a classical bit. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 89: 052140. PMID 25353772 DOI: 10.1103/PhysRevE.89.052140  0.785
2014 Rodgers CC, DeWeese MR. Neural correlates of task switching in prefrontal cortex and primary auditory cortex in a novel stimulus selection task for rodents. Neuron. 82: 1157-70. PMID 24908492 DOI: 10.1016/j.neuron.2014.04.031  0.511
2014 Sohl-Dickstein J, Mudigonda M, Deweese MR. Hamiltonian Monte Carlo without detailed balance 31st International Conference On Machine Learning, Icml 2014. 2: 1081-1088.  0.674
2013 Zulkowski PR, Sivak DA, DeWeese MR. Optimal control of transitions between nonequilibrium steady states. Plos One. 8: e82754. PMID 24386112 DOI: 10.1371/Journal.Pone.0082754  0.775
2013 Zylberberg J, DeWeese MR. Sparse coding models can exhibit decreasing sparseness while learning sparse codes for natural images. Plos Computational Biology. 9: e1003182. PMID 24009489 DOI: 10.1371/Journal.Pcbi.1003182  0.699
2013 King PD, Zylberberg J, DeWeese MR. Inhibitory interneurons decorrelate excitatory cells to drive sparse code formation in a spiking model of V1. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 5475-85. PMID 23536063 DOI: 10.1523/Jneurosci.4188-12.2013  0.705
2013 Hromádka T, Zador AM, DeWeese MR. Up states are rare in awake auditory cortex. Journal of Neurophysiology. 109: 1989-95. PMID 23343898 DOI: 10.1152/jn.00600.2012  0.7
2013 Marzen SE, Zylberberg J, DeWeese MR. How efficient coding of binocular disparity statistics in the primary visual cortex influences eye rotation strategy Bmc Neuroscience. 14. DOI: 10.1186/1471-2202-14-S1-O7  0.774
2012 Zylberberg J, Pfau D, Deweese MR. Dead leaves and the dirty ground: low-level image statistics in transmissive and occlusive imaging environments. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 86: 066112. PMID 23368009 DOI: 10.1103/Physreve.86.066112  0.65
2012 Zulkowski PR, Sivak DA, Crooks GE, DeWeese MR. Geometry of thermodynamic control. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 86: 041148. PMID 23214570 DOI: 10.1103/Physreve.86.041148  0.784
2012 Carlson NL, Ming VL, Deweese MR. Sparse codes for speech predict spectrotemporal receptive fields in the inferior colliculus. Plos Computational Biology. 8: e1002594. PMID 22807665 DOI: 10.1371/journal.pcbi.1002594  0.535
2011 Sohl-Dickstein J, Battaglino PB, DeWeese MR. New method for parameter estimation in probabilistic models: minimum probability flow. Physical Review Letters. 107: 220601. PMID 22182019 DOI: 10.1103/Physrevlett.107.220601  0.753
2011 Zylberberg J, Murphy JT, DeWeese MR. A sparse coding model with synaptically local plasticity and spiking neurons can account for the diverse shapes of V1 simple cell receptive fields. Plos Computational Biology. 7: e1002250. PMID 22046123 DOI: 10.1371/Journal.Pcbi.1002250  0.702
2011 Zylberberg J, Deweese MR. How should prey animals respond to uncertain threats? Frontiers in Computational Neuroscience. 5: 20. PMID 21559347 DOI: 10.3389/Fncom.2011.00020  0.657
2011 Sohl-Dickstein J, Battaglino P, DeWeese MR. Minimum probability flow learning Proceedings of the 28th International Conference On Machine Learning, Icml 2011. 905-912.  0.733
2010 Olshausen BA, Deweese MR. Applied mathematics: The statistics of style. Nature. 463: 1027-8. PMID 20182498 DOI: 10.1038/4631027a  0.58
2008 Yang Y, DeWeese MR, Otazu GH, Zador AM. Millisecond-scale differences in neural activity in auditory cortex can drive decisions. Nature Neuroscience. 11: 1262-3. PMID 18849984 DOI: 10.1038/Nn.2211  0.77
2008 Hromádka T, Deweese MR, Zador AM. Sparse representation of sounds in the unanesthetized auditory cortex. Plos Biology. 6: e16. PMID 18232737 DOI: 10.1371/journal.pbio.0060016  0.725
2006 DeWeese MR, Zador AM. Non-Gaussian membrane potential dynamics imply sparse, synchronous activity in auditory cortex. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 26: 12206-18. PMID 17122045 DOI: 10.1523/JNEUROSCI.2813-06.2006  0.648
2006 DeWeese MR, Zador A. Neurobiology: efficiency measures. Nature. 439: 920-1. PMID 16495979 DOI: 10.1038/439920a  0.612
2005 DeWeese MR, Hromádka T, Zador AM. Reliability and representational bandwidth in the auditory cortex. Neuron. 48: 479-88. PMID 16269364 DOI: 10.1016/j.neuron.2005.10.016  0.711
2005 Deweese MR, Zador AM. Neural gallops across auditory streams. Neuron. 48: 5-7. PMID 16202703 DOI: 10.1016/j.neuron.2005.09.010  0.619
2004 Deweese MR, Zador AM. Shared and private variability in the auditory cortex. Journal of Neurophysiology. 92: 1840-55. PMID 15115790 DOI: 10.1152/jn.00197.2004  0.626
2003 DeWeese MR, Wehr M, Zador AM. Binary spiking in auditory cortex. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 23: 7940-9. PMID 12944525 DOI: 10.1523/Jneurosci.23-21-07940.2003  0.726
2003 DeWeese MR, Zador AM. Binary coding in auditory cortex Advances in Neural Information Processing Systems.  0.562
2000 DeWeese MR. An optimal preparation for studying optimization. Neuron. 26: 546-8. PMID 10896148 DOI: 10.1016/S0896-6273(00)81188-5  0.306
1999 DeWeese MR, Meister M. How to measure the information gained from one symbol. Network (Bristol, England). 10: 325-40. PMID 10695762 DOI: 10.1088/0954-898X_10_4_303  0.37
1998 Buracas GT, Zador AM, DeWeese MR, Albright TD. Efficient discrimination of temporal patterns by motion-sensitive neurons in primate visual cortex. Neuron. 20: 959-69. PMID 9620700 DOI: 10.1016/S0896-6273(00)80477-8  0.632
1998 DeWeese M, Zador A. Asymmetric Dynamics in Optimal Variance Adaptation Neural Computation. 10: 1179-1202. DOI: 10.1162/089976698300017403  0.634
1996 DeWeese M. Optimization principles for the neural code Network: Computation in Neural Systems. 7: 325-331. DOI: 10.1088/0954-898X/7/2/013  0.359
1995 Bialek W, DeWeese M. Random switching and optimal processing in the perception of ambiguous signals. Physical Review Letters. 74: 3077-3080. PMID 10058097 DOI: 10.1103/Physrevlett.74.3077  0.667
1995 Bialek W, Deweese M. Random switching and optimal processing in the perception of ambiguous signals Physical Review Letters. 74: 3077-3080. DOI: 10.1103/PhysRevLett.74.3077  0.643
1995 DeWeese M, Bialek W. Information flow in sensory neurons Il Nuovo Cimento D. 17: 733-741. DOI: 10.1007/BF02451830  0.689
1993 Bialek W, DeWeese M, Rieke F, Warland D. Bits and brains: Information flow in the nervous system Physica a: Statistical Mechanics and Its Applications. 200: 581-593. DOI: 10.1016/0378-4371(93)90563-J  0.772
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