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Satrajit S. Ghosh, Ph.D. - Publications

Affiliations: 
2004-2011 Research Laboratory of Electronics Massachusetts Institute of Technology, Cambridge, MA, United States 
 2011- McGovern Institute for Brain Research Massachusetts Institute of Technology, Cambridge, MA, United States 
 2014- Department of Otolaryngology Harvard Medical School, Boston, MA, United States 
Area:
Neuroinformatics, Neuroimaging, Speech communication
Website:
http://www.mit.edu/~satra

56 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Esteban O, Ciric R, Finc K, Blair RW, Markiewicz CJ, Moodie CA, Kent JD, Goncalves M, DuPre E, Gomez DEP, Ye Z, Salo T, Valabregue R, Amlien IK, Liem F, ... ... Ghosh SS, et al. Analysis of task-based functional MRI data preprocessed with fMRIPrep. Nature Protocols. PMID 32514178 DOI: 10.1038/s41596-020-0327-3  1
2020 Hung Y, Uchida M, Gaillard SL, Woodworth H, Kelberman C, Capella J, Kadlec K, Goncalves M, Ghosh S, Yendiki A, Chai XJ, Hirshfeld-Becker DR, Whitfield-Gabrieli S, Gabrieli JDE, Biederman J. Cingulum-Callosal white-matter microstructure associated with emotional dysregulation in children: A diffusion tensor imaging study. Neuroimage. Clinical. 27: 102266. PMID 32408198 DOI: 10.1016/j.nicl.2020.102266  1
2020 Siless V, Hubbard NA, Jones R, Wang J, Lo N, Bauer CCC, Goncalves M, Frosch I, Norton D, Vergara G, Conroy K, De Souza FV, Rosso IM, Wickham AH, Cosby EA, ... ... Ghosh S, et al. Image acquisition and quality assurance in the Boston Adolescent Neuroimaging of Depression and Anxiety study. Neuroimage. Clinical. 26: 102242. PMID 32339824 DOI: 10.1016/j.nicl.2020.102242  1
2020 Okano K, Bauer CCC, Ghosh SS, Lee YJ, Melero H, de Los Angeles C, Nestor PG, Del Re EC, Northoff G, Whitfield-Gabrieli S, Niznikiewicz MA. Real-time fMRI feedback impacts brain activation, results in auditory hallucinations reduction: Part 1: Superior temporal gyrus -Preliminary evidence. Psychiatry Research. 286: 112862. PMID 32113035 DOI: 10.1016/j.psychres.2020.112862  1
2019 Wagley N, Perrachione TK, Ostrovskaya I, Ghosh SS, Saxler PK, Lymberis J, Wexler K, Gabrieli JDE, Kovelman I. Persistent Neurobehavioral Markers of Developmental Morphosyntax Errors in Adults. Journal of Speech, Language, and Hearing Research : Jslhr. 1-12. PMID 31825709 DOI: 10.1044/2019_JSLHR-19-00154  1
2019 Sitek KR, Gulban OF, Calabrese E, Johnson GA, Lage-Castellanos A, Moerel M, Ghosh SS, de Martino F. Mapping the human subcortical auditory system using histology, post mortem MRI and in vivo MRI at 7T. Elife. 8. PMID 31368891 DOI: 10.7554/eLife.48932  1
2019 Guell X, Anteraper SA, Ghosh SS, Gabrieli JDE, Schmahmann JD. Neurodevelopmental and Psychiatric Symptoms in Patients with a Cyst Compressing the Cerebellum: an Ongoing Enigma. Cerebellum (London, England). PMID 31321675 DOI: 10.1007/s12311-019-01050-4  1
2019 Kennedy DN, Abraham SA, Bates JF, Crowley A, Ghosh S, Gillespie T, Goncalves M, Grethe JS, Halchenko YO, Hanke M, Haselgrove C, Hodge SM, Jarecka D, Kaczmarzyk J, Keator DB, et al. Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging. Frontiers in Neuroinformatics. 13: 1. PMID 30792636 DOI: 10.3389/fninf.2019.00001  1
2019 Guell X, Goncalves M, Kaczmarzyk JR, Gabrieli JDE, Schmahmann JD, Ghosh SS. LittleBrain: A gradient-based tool for the topographical interpretation of cerebellar neuroimaging findings. Plos One. 14: e0210028. PMID 30650101 DOI: 10.1371/journal.pone.0210028  1
2018 Esteban O, Markiewicz CJ, Blair RW, Moodie CA, Isik AI, Erramuzpe A, Kent JD, Goncalves M, DuPre E, Snyder M, Oya H, Ghosh SS, Wright J, Durnez J, Poldrack RA, et al. fMRIPrep: a robust preprocessing pipeline for functional MRI. Nature Methods. PMID 30532080 DOI: 10.1038/s41592-018-0235-4  1
2017 Ghosh SS, Poline JB, Keator DB, Halchenko YO, Thomas AG, Kessler DA, Kennedy DN. A very simple, re-executable neuroimaging publication. F1000research. 6: 124. PMID 28781753 DOI: 10.12688/f1000research.10783.1  1
2017 Perrachione TK, Ghosh SS, Ostrovskaya I, Gabrieli JDE, Kovelman I. Phonological Working Memory for Words and Nonwords in Cerebral Cortex. Journal of Speech, Language, and Hearing Research : Jslhr. 1-21. PMID 28631005 DOI: 10.1044/2017_JSLHR-L-15-0446  1
2017 Nenning KH, Liu H, Ghosh S, Sabuncu M, Schwartz E, Langs G. Diffeomorphic Functional Brain Surface Alignment: Functional Demons. Neuroimage. PMID 28416451 DOI: 10.1016/j.neuroimage.2017.04.028  1
2017 Gorgolewski KJ, Alfaro-Almagro F, Auer T, Bellec P, Capotă M, Chakravarty MM, Churchill NW, Cohen AL, Craddock RC, Devenyi GA, Eklund A, Esteban O, Flandin G, Ghosh SS, Guntupalli JS, et al. BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods. Plos Computational Biology. 13: e1005209. PMID 28278228 DOI: 10.1371/journal.pcbi.1005209  1
2017 Klein A, Ghosh SS, Bao FS, Giard J, Häme Y, Stavsky E, Lee N, Rossa B, Reuter M, Chaibub Neto E, Keshavan A. Mindboggling morphometry of human brains. Plos Computational Biology. 13: e1005350. PMID 28231282 DOI: 10.1371/journal.pcbi.1005350  1
2016 Perrachione TK, Del Tufo SN, Winter R, Murtagh J, Cyr A, Chang P, Halverson K, Ghosh SS, Christodoulou JA, Gabrieli JD. Dysfunction of Rapid Neural Adaptation in Dyslexia. Neuron. 92: 1383-1397. PMID 28009278 DOI: 10.1016/j.neuron.2016.11.020  1
2016 Maumet C, Auer T, Bowring A, Chen G, Das S, Flandin G, Ghosh S, Glatard T, Gorgolewski KJ, Helmer KG, Jenkinson M, Keator DB, Nichols BN, Poline JB, Reynolds R, et al. Sharing brain mapping statistical results with the neuroimaging data model. Scientific Data. 3: 160102. PMID 27922621 DOI: 10.1038/sdata.2016.102  1
2016 Margulies DS, Ghosh SS, Goulas A, Falkiewicz M, Huntenburg JM, Langs G, Bezgin G, Eickhoff SB, Castellanos FX, Petrides M, Jefferies E, Smallwood J. Situating the default-mode network along a principal gradient of macroscale cortical organization. Proceedings of the National Academy of Sciences of the United States of America. PMID 27791099 DOI: 10.1073/pnas.1608282113  1
2016 Gorgolewski KJ, Auer T, Calhoun VD, Craddock RC, Das S, Duff EP, Flandin G, Ghosh SS, Glatard T, Halchenko YO, Handwerker DA, Hanke M, Keator D, Li X, Michael Z, et al. The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data. 3: 160044. PMID 27326542 DOI: 10.1038/sdata.2016.44  1
2016 Sitek KR, Cai S, Beal DS, Perkell JS, Guenther FH, Ghosh SS. Decreased Cerebellar-Orbitofrontal Connectivity Correlates with Stuttering Severity: Whole-Brain Functional and Structural Connectivity Associations with Persistent Developmental Stuttering. Frontiers in Human Neuroscience. 10: 190. PMID 27199712 DOI: 10.3389/fnhum.2016.00190  1
2016 Allen GI, Amoroso N, Anghel C, Balagurusamy V, Bare CJ, Beaton D, Bellotti R, Bennett DA, Boehme K, Boutros PC, Caberlotto L, Caloian C, Campbell F, Neto EC, Chang YC, ... ... Ghosh SS, et al. Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. PMID 27079753 DOI: 10.1016/j.jalz.2016.02.006  1
2016 Christodoulou JA, Murtagh J, Cyr A, Perrachione TK, Chang P, Halverson K, Hook P, Yendiki A, Ghosh S, Gabrieli JD. Relation of White-Matter Microstructure to Reading Ability and Disability in Beginning Readers. Neuropsychology. PMID 26949926 DOI: 10.1037/neu0000243  1
2015 Langs G, Golland P, Ghosh SS. Predicting Activation Across Individuals with Resting-State Functional Connectivity Based Multi-Atlas Label Fusion. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 9350: 313-320. PMID 26855977 DOI: 10.1007/978-3-319-24571-3_38  1
2015 Whitfield-Gabrieli S, Ghosh SS, Nieto-Castanon A, Saygin Z, Doehrmann O, Chai XJ, Reynolds GO, Hofmann SG, Pollack MH, Gabrieli JD. Brain connectomics predict response to treatment in social anxiety disorder. Molecular Psychiatry. PMID 26260493 DOI: 10.1038/mp.2015.109  1
2015 Gorgolewski KJ, Varoquaux G, Rivera G, Schwarz Y, Ghosh SS, Maumet C, Sochat VV, Nichols TE, Poldrack RA, Poline JB, Yarkoni T, Margulies DS. NeuroVault.org: a web-based repository for collecting and sharing unthresholded statistical maps of the human brain. Frontiers in Neuroinformatics. 9: 8. PMID 25914639 DOI: 10.3389/fninf.2015.00008  1
2015 Gorgolewski KJ, Varoquaux G, Rivera G, Schwartz Y, Sochat VV, Ghosh SS, Maumet C, Nichols TE, Poline JB, Yarkoni T, Margulies DS, Poldrack RA. NeuroVault.org: A repository for sharing unthresholded statistical maps, parcellations, and atlases of the human brain. Neuroimage. PMID 25869863 DOI: 10.1016/j.neuroimage.2015.04.016  1
2015 Gabrieli JD, Ghosh SS, Whitfield-Gabrieli S. Prediction as a humanitarian and pragmatic contribution from human cognitive neuroscience. Neuron. 85: 11-26. PMID 25569345 DOI: 10.1016/j.neuron.2014.10.047  1
2014 Stoeckel LE, Garrison KA, Ghosh S, Wighton P, Hanlon CA, Gilman JM, Greer S, Turk-Browne NB, deBettencourt MT, Scheinost D, Craddock C, Thompson T, Calderon V, Bauer CC, George M, et al. Optimizing real time fMRI neurofeedback for therapeutic discovery and development. Neuroimage. Clinical. 5: 245-55. PMID 25161891 DOI: 10.1016/j.nicl.2014.07.002  1
2014 Christodoulou JA, Del Tufo SN, Lymberis J, Saxler PK, Ghosh SS, Triantafyllou C, Whitfield-Gabrieli S, Gabrieli JD. Brain bases of reading fluency in typical reading and impaired fluency in dyslexia. Plos One. 9: e100552. PMID 25058010 DOI: 10.1371/journal.pone.0100552  1
2014 Cai S, Tourville JA, Beal DS, Perkell JS, Guenther FH, Ghosh SS. Diffusion imaging of cerebral white matter in persons who stutter: evidence for network-level anomalies. Frontiers in Human Neuroscience. 8: 54. PMID 24611042 DOI: 10.3389/fnhum.2014.00054  1
2014 Cai S, Beal DS, Ghosh SS, Guenther FH, Perkell JS. Impaired timing adjustments in response to time-varying auditory perturbation during connected speech production in persons who stutter. Brain and Language. 129: 24-9. PMID 24486601 DOI: 10.1016/j.bandl.2014.01.002  1
2013 Tustison NJ, Johnson HJ, Rohlfing T, Klein A, Ghosh SS, Ibanez L, Avants BB. Instrumentation bias in the use and evaluation of scientific software: recommendations for reproducible practices in the computational sciences. Frontiers in Neuroscience. 7: 162. PMID 24058331 DOI: 10.3389/fnins.2013.00162  1
2013 Perrachione TK, Ghosh SS. Optimized design and analysis of sparse-sampling FMRI experiments. Frontiers in Neuroscience. 7: 55. PMID 23616742 DOI: 10.3389/fnins.2013.00055  1
2013 Hinds O, Thompson TW, Ghosh S, Yoo JJ, Whitfield-Gabrieli S, Triantafyllou C, Gabrieli JD. Roles of default-mode network and supplementary motor area in human vigilance performance: evidence from real-time fMRI. Journal of Neurophysiology. 109: 1250-8. PMID 23236006 DOI: 10.1152/jn.00533.2011  1
2013 Doehrmann O, Ghosh SS, Polli FE, Reynolds GO, Horn F, Keshavan A, Triantafyllou C, Saygin ZM, Whitfield-Gabrieli S, Hofmann SG, Pollack M, Gabrieli JD. Predicting treatment response in social anxiety disorder from functional magnetic resonance imaging. Jama Psychiatry. 70: 87-97. PMID 22945462 DOI: 10.1001/2013.jamapsychiatry.5  1
2013 Ghosh SS, Keshavan A, Langs G. Predicting treatment response from resting state fMRI data: Comparison of parcellation approaches Proceedings - 2013 3rd International Workshop On Pattern Recognition in Neuroimaging, Prni 2013. 225-228. DOI: 10.1109/PRNI.2013.64  1
2012 Cai S, Beal DS, Ghosh SS, Tiede MK, Guenther FH, Perkell JS. Weak responses to auditory feedback perturbation during articulation in persons who stutter: evidence for abnormal auditory-motor transformation. Plos One. 7: e41830. PMID 22911857 DOI: 10.1371/journal.pone.0041830  1
2012 Ghosh SS, Klein A, Avants B, Millman KJ. Learning from open source software projects to improve scientific review. Frontiers in Computational Neuroscience. 6: 18. PMID 22529798 DOI: 10.3389/fncom.2012.00018  1
2012 Poline JB, Breeze JL, Ghosh S, Gorgolewski K, Halchenko YO, Hanke M, Haselgrove C, Helmer KG, Keator DB, Marcus DS, Poldrack RA, Schwartz Y, Ashburner J, Kennedy DN. Data sharing in neuroimaging research. Frontiers in Neuroinformatics. 6: 9. PMID 22493576 DOI: 10.3389/fninf.2012.00009  1
2011 Cai S, Ghosh SS, Guenther FH, Perkell JS. Focal manipulations of formant trajectories reveal a role of auditory feedback in the online control of both within-syllable and between-syllable speech timing. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 16483-90. PMID 22072698 DOI: 10.1523/JNEUROSCI.3653-11.2011  1
2011 Silver AL, Nimkin K, Ashland JE, Ghosh SS, van der Kouwe AJ, Brigger MT, Hartnick CJ. Cine magnetic resonance imaging with simultaneous audio to evaluate pediatric velopharyngeal insufficiency. Archives of Otolaryngology--Head & Neck Surgery. 137: 258-63. PMID 21422310 DOI: 10.1001/archoto.2011.11  1
2011 Golfinopoulos E, Tourville JA, Bohland JW, Ghosh SS, Nieto-Castanon A, Guenther FH. fMRI investigation of unexpected somatosensory feedback perturbation during speech. Neuroimage. 55: 1324-38. PMID 21195191 DOI: 10.1016/j.neuroimage.2010.12.065  1
2011 Brunner J, Ghosh S, Hoole P, Matthies M, Tiede M, Perkella J. The influence of auditory acuity on acoustic variability and the use of motor equivalence during adaptation to a perturbation Journal of Speech, Language, and Hearing Research. 54: 727-739. PMID 20966388 DOI: 10.1044/1092-4388(2010/09-0256)  1
2011 Hinds O, Ghosh S, Thompson TW, Yoo JJ, Whitfield-Gabrieli S, Triantafyllou C, Gabrieli JD. Computing moment-to-moment BOLD activation for real-time neurofeedback. Neuroimage. 54: 361-8. PMID 20682350 DOI: 10.1016/j.neuroimage.2010.07.060  1
2010 Ghosh SS, Matthies ML, Maas E, Hanson A, Tiede M, Ménard L, Guenther FH, Lane H, Perkell JS. An investigation of the relation between sibilant production and somatosensory and auditory acuity. The Journal of the Acoustical Society of America. 128: 3079-87. PMID 21110603 DOI: 10.1121/1.3493430  1
2010 Cai S, Ghosh SS, Guenther FH, Perkell JS. Adaptive auditory feedback control of the production of formant trajectories in the Mandarin triphthong /iau/ and its pattern of generalization. The Journal of the Acoustical Society of America. 128: 2033-48. PMID 20968374 DOI: 10.1121/1.3479539  1
2010 Ghosh SS, Kakunoori S, Augustinack J, Nieto-Castanon A, Kovelman I, Gaab N, Christodoulou JA, Triantafyllou C, Gabrieli JD, Fischl B. Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age. Neuroimage. 53: 85-93. PMID 20621657 DOI: 10.1016/j.neuroimage.2010.05.075  1
2010 Klein A, Ghosh SS, Avants B, Yeo BT, Fischl B, Ardekani B, Gee JC, Mann JJ, Parsey RV. Evaluation of volume-based and surface-based brain image registration methods. Neuroimage. 51: 214-20. PMID 20123029 DOI: 10.1016/j.neuroimage.2010.01.091  1
2008 Balci SK, Sabuncu MR, Yoo J, Ghosh SS, Whitfield-Gabrieli S, Gabrieli JD, Golland P. Prediction of Successful Memory Encoding from fMRI Data. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 2008: 97-104. PMID 20401334 DOI: 10.1901/jaba.2008.2008-97  1
2008 Ghosh SS, Tourville JA, Guenther FH. A neuroimaging study of premotor lateralization and cerebellar involvement in the production of phonemes and syllables. Journal of Speech, Language, and Hearing Research : Jslhr. 51: 1183-202. PMID 18664692 DOI: 10.1044/1092-4388(2008/07-0119)  1
2008 Perkell JS, Lane H, Ghosh S, Matthies ML, Tiede M, Guenther F, Ménard L. Mechanisms of vowel production: Auditory goals and speaker acuity Proceedings of Issp 2008 - 8th International Seminar On Speech Production. 29-32.  1
2008 Cai S, Boucek M, Ghosh SS, Guenther FH, Perkell JS. A system for online dynamic perturbation of formant trajectories and results from perturbations of the mandarin triphthong /iau Proceedings of Issp 2008 - 8th International Seminar On Speech Production. 65-68.  1
2006 Guenther FH, Ghosh SS, Tourville JA. Neural modeling and imaging of the cortical interactions underlying syllable production. Brain and Language. 96: 280-301. PMID 16040108 DOI: 10.1016/j.bandl.2005.06.001  1
2005 Klein A, Mensh B, Ghosh S, Tourville J, Hirsch J. Mindboggle: automated brain labeling with multiple atlases. Bmc Medical Imaging. 5: 7. PMID 16202176 DOI: 10.1186/1471-2342-5-7  1
2004 Guenther FH, Nieto-Castanon A, Ghosh SS, Tourville JA. Representation of sound categories in auditory cortical maps. Journal of Speech, Language, and Hearing Research : Jslhr. 47: 46-57. PMID 15072527 DOI: 10.1044/1092-4388(2004/005)  1
2003 Nieto-Castanon A, Ghosh SS, Tourville JA, Guenther FH. Region of interest based analysis of functional imaging data. Neuroimage. 19: 1303-16. PMID 12948689 DOI: 10.1016/S1053-8119(03)00188-5  1
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