Chiquito Crasto - Publications

Affiliations: 
The University of Alabama, Tuscaloosa, AL 

33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Marenco L, Wang R, McDougal R, Olender T, Twik M, Bruford E, Liu X, Zhang J, Lancet D, Shepherd G, Crasto C. ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions. Database : the Journal of Biological Databases and Curation. 2016. PMID 27694208 DOI: 10.1093/database/baw132  0.52
2015 Breton GW, Crasto CJ. Substituted 2-(Dimethylamino)biphenyl-2'-carboxaldehydes as Substrates for Studying n→π* Interactions and as a Promising Framework for Tracing the Bürgi-Dunitz Trajectory. The Journal of Organic Chemistry. 80: 7375-84. PMID 26154076 DOI: 10.1021/acs.joc.5b00766  1
2015 Yang Y, Mishra V, Crasto CJ, Chen M, Dimmitt R, Harmon CM. Third transmembrane domain of the adrenocorticotropic receptor is critical for ligand selectivity and potency. The Journal of Biological Chemistry. 290: 7685-92. PMID 25605722 DOI: 10.1074/jbc.M114.596122  1
2014 Lai PC, Guida B, Shi J, Crasto CJ. Preferential binding of an odor within olfactory receptors: a precursor to receptor activation. Chemical Senses. 39: 107-23. PMID 24398973 DOI: 10.1093/chemse/bjt060  1
2013 Charlier L, Topin J, de March CA, Lai PC, Crasto CJ, Golebiowski J. Molecular modelling of odorant/olfactory receptor complexes. Methods in Molecular Biology (Clifton, N.J.). 1003: 53-65. PMID 23585033 DOI: 10.1007/978-1-62703-377-0_4  1
2013 Marenco LN, Bahl G, Hyland L, Shi J, Wang R, Lai PC, Miller PL, Shepherd GM, Crasto CJ. Databases in SenseLab for the genomics, proteomics, and function of olfactory receptors. Methods in Molecular Biology (Clifton, N.J.). 1003: 3-22. PMID 23585030 DOI: 10.1007/978-1-62703-377-0_1  1
2013 Crasto C, Narne C, Kawai M, Wilson L, Barnes S. MRMPath and MRMutation, Facilitating Discovery of Mass Transitions for Proteotypic Peptides in Biological Pathways Using a Bioinformatics Approach. Advances in Bioinformatics. 2013: 527295. PMID 23424586 DOI: 10.1155/2013/527295  1
2013 Crasto CJ. Preface Methods in Molecular Biology. 1003: vii-viii. DOI: 10.1007/978-1-62703-377_0  1
2012 Lai PC, Crasto CJ. Beyond modeling: all-atom olfactory receptor model simulations. Frontiers in Genetics. 3: 61. PMID 22563330 DOI: 10.3389/fgene.2012.00061  1
2011 Crasto C, Luo D, Yu F, Forero A, Chen D. GenDrux: a biomedical literature search system to identify gene expression-based drug sensitivity in breast cancer. Bmc Medical Informatics and Decision Making. 11: 28. PMID 21545721 DOI: 10.1186/1472-6947-11-28  1
2010 PopÅ‚awski AB, Jankowski M, Erickson SW, Díaz de StÃ¥hl T, Partridge EC, Crasto C, Guo J, Gibson J, Menzel U, Bruder CE, Kaczmarczyk A, Benetkiewicz M, Andersson R, Sandgren J, Zegarska B, et al. Frequent genetic differences between matched primary and metastatic breast cancer provide an approach to identification of biomarkers for disease progression. European Journal of Human Genetics : Ejhg. 18: 560-8. PMID 20051991 DOI: 10.1038/ejhg.2009.230  1
2009 Crasto CJ. Computational Biology of Olfactory Receptors. Current Bioinformatics. 4: 8-15. PMID 21984880 DOI: 10.2174/157489309787158143  1
2009 Yang Y, Hruby VJ, Chen M, Crasto C, Cai M, Harmon CM. Novel binding motif of ACTH analogues at the melanocortin receptors. Biochemistry. 48: 9775-84. PMID 19743876 DOI: 10.1021/bi900634e  1
2008 Lai PC, Bahl G, Gremigni M, Matarazzo V, Clot-Faybesse O, Ronin C, Crasto CJ. An olfactory receptor pseudogene whose function emerged in humans: a case study in the evolution of structure-function in GPCRs. Journal of Structural and Functional Genomics. 9: 29-40. PMID 18802787 DOI: 10.1007/s10969-008-9043-x  1
2008 Piotrowski A, Bruder CE, Andersson R, Diaz de StÃ¥hl T, Menzel U, Sandgren J, Poplawski A, von Tell D, Crasto C, Bogdan A, Bartoszewski R, Bebok Z, Krzyzanowski M, Jankowski Z, Partridge EC, et al. Somatic mosaicism for copy number variation in differentiated human tissues. Human Mutation. 29: 1118-24. PMID 18570184 DOI: 10.1002/humu.20815  1
2008 Bruder CE, Piotrowski A, Gijsbers AA, Andersson R, Erickson S, Diaz de StÃ¥hl T, Menzel U, Sandgren J, von Tell D, Poplawski A, Crowley M, Crasto C, Partridge EC, Tiwari H, Allison DB, et al. Phenotypically concordant and discordant monozygotic twins display different DNA copy-number-variation profiles. American Journal of Human Genetics. 82: 763-71. PMID 18304490 DOI: 10.1016/j.ajhg.2007.12.011  1
2007 Crasto CJ, Shepherd GM. Managing knowledge in neuroscience. Methods in Molecular Biology (Clifton, N.J.). 401: 3-21. PMID 18368357 DOI: 10.1007/978-1-59745-520-6_1  1
2007 Man O, Willhite DC, Crasto CJ, Shepherd GM, Gilad Y. A framework for exploring functional variability in olfactory receptor genes. Plos One. 2: e682. PMID 17668060 DOI: 10.1371/journal.pone.0000682  1
2007 Liu N, Crasto CJ, Ma M. Integrated olfactory receptor and microarray gene expression databases. Bmc Bioinformatics. 8: 231. PMID 17603910 DOI: 10.1186/1471-2105-8-231  1
2007 Crasto CJ, Marenco LN, Liu N, Morse TM, Cheung KH, Lai PC, Bahl G, Masiar P, Lam HY, Lim E, Chen H, Nadkarni P, Migliore M, Miller PL, Shepherd GM. SenseLab: new developments in disseminating neuroscience information. Briefings in Bioinformatics. 8: 150-62. PMID 17510162 DOI: 10.1093/bib/bbm018  1
2007 Lam HY, Marenco L, Clark T, Gao Y, Kinoshita J, Shepherd G, Miller P, Wu E, Wong GT, Liu N, Crasto C, Morse T, Stephens S, Cheung KH. AlzPharm: integration of neurodegeneration data using RDF. Bmc Bioinformatics. 8: S4. PMID 17493287 DOI: 10.1186/1471-2105-8-S3-S4  1
2007 Crasto CJ, Masiar P, Miller PL. NeuroExtract: facilitating neuroscience-oriented retrieval from broadly-focused bioscience databases using text-based query mediation. Journal of the American Medical Informatics Association : Jamia. 14: 355-60. PMID 17329721 DOI: 10.1197/jamia.M2321  1
2005 Lai PC, Singer MS, Crasto CJ. Structural activation pathways from dynamic olfactory receptor-odorant interactions. Chemical Senses. 30: 781-92. PMID 16243965 DOI: 10.1093/chemse/bji070  1
2003 Crasto CJ, Marenco LN, Migliore M, Mao B, Nadkarni PM, Miller P, Shepherd GM. Text mining neuroscience journal articles to populate neuroscience databases. Neuroinformatics. 1: 215-37. PMID 15046245 DOI: 10.1385/NI:1:3:215  1
2003 Crasto CJ, Morse TM, Migliore M, Nadkarni P, Hines M, Brash DE, Miller PL, Shepherd GM. Creating knowledgebases to text-mine PUBMED articles using clustering techniques. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 821. PMID 14728326  1
2003 Marenco L, Tosches N, Crasto C, Shepherd G, Miller PL, Nadkarni PM. Achieving evolvable Web-database bioscience applications using the EAV/CR framework: recent advances. Journal of the American Medical Informatics Association : Jamia. 10: 444-53. PMID 12807806 DOI: 10.1197/jamia.M1303  1
2002 Crasto C, Marenco L, Miller P, Shepherd G. Olfactory Receptor Database: a metadata-driven automated population from sources of gene and protein sequences. Nucleic Acids Research. 30: 354-60. PMID 11752336  1
2002 Crasto CJ, Stevens ED. Non-bonded intra-molecular interactions in 1,8-disubstituted naphthalenes with a cyano group as the electrophilic substituent Journal of Molecular Structure: Theochem. 582: 77-84. DOI: 10.1016/S0166-1280(01)00767-9  1
2001 Crasto C, Singer MS, Shepherd GM. The olfactory receptor family album. Genome Biology. 2: REVIEWS1027. PMID 11597337  1
2001 Crasto CJ, Feng J. Sequence codes for extended conformation: a neighbor-dependent sequence analysis of loops in proteins. Proteins. 42: 399-413. PMID 11151011 DOI: 10.1002/1097-0134(20010215)42:3<399::AID-PROT100>3.0.CO;2-E  1
2000 Crasto CJ, Feng JA. LINKER: a program to generate linker sequences for fusion proteins. Protein Engineering. 13: 309-12. PMID 10835103  1
1998 Feng JA, Crasto CJ, Matsumoto Y. Deoxyribose phosphate excision by the N-terminal domain of the polymerase beta: the mechanism revisited. Biochemistry. 37: 9605-11. PMID 9657672 DOI: 10.1021/bi9808619  1
1998 Crasto CJ, Stevens ED. Use of electrostatic potentials to study non-bonded intramolecular interactions in 1,8-disubstituted naphthalenes with carbonyl groups as electrophilic substituents Journal of Molecular Structure: Theochem. 454: 51-59.  1
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