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Daniel Russel, Ph.D. - Publications

Affiliations: 
2007 Stanford University, Palo Alto, CA 
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11 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2014 Bonomi M, Pellarin R, Kim SJ, Russel D, Sundin BA, Riffle M, Jaschob D, Ramsden R, Davis TN, Muller EG, Sali A. Determining protein complex structures based on a Bayesian model of in vivo Förster resonance energy transfer (FRET) data. Molecular & Cellular Proteomics : McP. 13: 2812-23. PMID 25139910 DOI: 10.1074/Mcp.M114.040824  0.365
2012 Russel D, Lasker K, Webb B, Velázquez-Muriel J, Tjioe E, Schneidman-Duhovny D, Peterson B, Sali A. Putting the pieces together: integrative modeling platform software for structure determination of macromolecular assemblies. Plos Biology. 10: e1001244. PMID 22272186 DOI: 10.1371/Journal.Pbio.1001244  0.326
2011 Webb B, Lasker K, Schneidman-Duhovny D, Tjioe E, Phillips J, Kim SJ, Velázquez-Muriel J, Russel D, Sali A. Modeling of proteins and their assemblies with the integrative modeling platform. Methods in Molecular Biology (Clifton, N.J.). 781: 377-97. PMID 21877292 DOI: 10.1007/978-1-61779-276-2_19  0.363
2010 Lasker K, Phillips JL, Russel D, Velázquez-Muriel J, Schneidman-Duhovny D, Tjioe E, Webb B, Schlessinger A, Sali A. Integrative structure modeling of macromolecular assemblies from proteomics data. Molecular & Cellular Proteomics : McP. 9: 1689-702. PMID 20507923 DOI: 10.1074/Mcp.R110.000067  0.359
2009 Russel D, Lasker K, Phillips J, Schneidman-Duhovny D, Velázquez-Muriel JA, Sali A. The structural dynamics of macromolecular processes. Current Opinion in Cell Biology. 21: 97-108. PMID 19223165 DOI: 10.1016/J.Ceb.2009.01.022  0.304
2007 Russel D, Karavelas MI, Guibas LJ. A package for exact kinetic data structures and sweepline algorithms. Computational Geometry : Theory and Applications. 38: 111-127. PMID 21165159 DOI: 10.1016/J.Comgeo.2006.11.006  0.593
2005 Aishima J, Russel DS, Guibas LJ, Adams PD, Brunger AT. Automated crystallographic ligand building using the medial axis transform of an electron-density isosurface. Acta Crystallographica. Section D, Biological Crystallography. 61: 1354-63. PMID 16204887 DOI: 10.1107/S0907444905023152  0.421
2005 Russel D, Guibas L. Exploring protein folding trajectories using geometric spanners. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 40-51. PMID 15759612  0.441
2004 Agarwal P, Guibas L, Nguyen A, Russel D, Zhang L. Collision detection for deforming necklaces Computational Geometry: Theory and Applications. 28: 137-163. DOI: 10.1016/j.comgeo.2004.03.008  0.471
2004 Guibas L, Karavelas MI, Russel D. A computational framework for handling motion Proceedings of the Sixth Workshop On Algorithm Engineering and Experiments and the First Workshop On Analytic Algorithms and Combinatorics. 129-141.  0.577
2004 Guibas L, Russel D. An empirical comparison of techniques for updating delaunay triangulations Proceedings of the Annual Symposium On Computational Geometry. 170-179.  0.371
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