Janine LaSalle - Related publications

University of California, Davis, Davis, CA 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Laighneach A, Desbonnet L, Kelly JP, Donohoe G, Morris DW. Meta-Analysis of Brain Gene Expression Data from Mouse Model Studies of Maternal Immune Activation Using Poly(I:C). Genes. 12. PMID 34573345 DOI: 10.3390/genes12091363   
2021 Lambert JT, Su-Feher L, Cichewicz K, Warren TL, Zdilar I, Wang Y, Lim KJ, Haigh JL, Morse SJ, Canales CP, Stradleigh TW, Castillo Palacios E, Haghani V, Moss SD, Parolini H, et al. Parallel functional testing identifies enhancers active in early postnatal mouse brain. Elife. 10. PMID 34605404 DOI: 10.7554/eLife.69479   
2021 Thomson E, Dawson R, H'ng CH, Adikusuma F, Piltz S, Thomas PQ. The Nestin neural enhancer is essential for normal levels of endogenous Nestin in neuroprogenitors but is not required for embryo development. Plos One. 16: e0258538. PMID 34739481 DOI: 10.1371/journal.pone.0258538   
2021 Ridnik M, Schoenfelder S, Gonen N. Cis-Regulatory Control of Mammalian Sex Determination. Sexual Development : Genetics, Molecular Biology, Evolution, Endocrinology, Embryology, and Pathology of Sex Determination and Differentiation. 1-18. PMID 34710870 DOI: 10.1159/000519244   
2021 Chen J, Lambo ME, Ge X, Dearborn JT, Liu Y, McCullough KB, Swift RG, Tabachnick DR, Tian L, Noguchi K, Garbow JR, Constantino JN, Gabel HW, Hengen KB, Maloney SE, et al. A MYT1L syndrome mouse model recapitulates patient phenotypes and reveals altered brain development due to disrupted neuronal maturation. Neuron. PMID 34614421 DOI: 10.1016/j.neuron.2021.09.009   
2021 Liu YX, Li QZ, Cao YN. The effect of key DNA methylation in different regions on gene expression in hepatocellular carcinoma. Molecular Omics. PMID 34782907 DOI: 10.1039/d1mo00282a   
2021 Stamos DB, Clubb LM, Mitra A, Chopp LB, Nie J, Ding Y, Das A, Venkataganesh H, Lee J, El-Khoury D, Li L, Bhandoola A, Bosselut R, Love PE. The histone demethylase Lsd1 regulates multiple repressive gene programs during T cell development. The Journal of Experimental Medicine. 218. PMID 34726730 DOI: 10.1084/jem.20202012   
2021 Wang K, Dai R, Xia Y, Tian J, Jiao C, Mikhailova T, Zhang C, Chen C, Liu C. Spatiotemporal specificity of correlated DNA methylation and gene expression pairs across different human tissues and stages of brain development. Epigenetics. PMID 34652256 DOI: 10.1080/15592294.2021.1993607   
2021 Liang W, Zou X, Li G, Zhou S, Tian C, Schaefke B. Systematic Analysis of Monoallelic Gene Expression and Chromatin Accessibility Across Multiple Tissues in Hybrid Mice. Frontiers in Cell and Developmental Biology. 9: 717555. PMID 34631706 DOI: 10.3389/fcell.2021.717555   
2021 Smith J, Banerjee R, Waly R, Urbano A, Gimenez G, Day R, Eccles MR, Weeks RJ, Chatterjee A. Locus-Specific DNA Methylation Editing in Melanoma Cell Lines Using a CRISPR-Based System. Cancers. 13. PMID 34771597 DOI: 10.3390/cancers13215433   
2021 Wang Y, Li Z, Yang G, Cai L, Yang F, Zhang Y, Zeng Y, Ma Q, Zeng F. The Study of Alternative Splicing Events in Human Induced Pluripotent Stem Cells From a Down's Syndrome Patient. Frontiers in Cell and Developmental Biology. 9: 661381. PMID 34660567 DOI: 10.3389/fcell.2021.661381   
2021 Rud D, Marjoram P, Siegmund K, Shibata D. Functional human genes typically exhibit epigenetic conservation. Plos One. 16: e0253250. PMID 34520456 DOI: 10.1371/journal.pone.0253250   
2021 Luo D, Li X, Tang S, Song F, Li W, Xie G, Liang J, Zhou J. Epigenetic modifications in neuropathic pain. Molecular Pain. 17: 17448069211056767. PMID 34823400 DOI: 10.1177/17448069211056767   
2021 Choudhury SR, Dutta S, Bhaduri U, Rao MRS. LncRNA Hmrhl regulates expression of cancer related genes in chronic myelogenous leukemia through chromatin association. Nar Cancer. 3: zcab042. PMID 34734184 DOI: 10.1093/narcan/zcab042   
2021 Akinyemi TS, Shao N, Lyu Z, Drake IJ, Liu Y, Whitman WB. Tuning Gene Expression by Phosphate in the Methanogenic Archaeon . Acs Synthetic Biology. PMID 34665610 DOI: 10.1021/acssynbio.1c00322   
2021 Mall EM, Lecanda A, Drexler HCA, Raz E, Schöler HR, Schlatt S. Heading towards a dead end: The role of DND1 in germ line differentiation of human iPSCs. Plos One. 16: e0258427. PMID 34653201 DOI: 10.1371/journal.pone.0258427   
2021 Pahl MC, Doege CA, Hodge KM, Littleton SH, Leonard ME, Lu S, Rausch R, Pippin JA, De Rosa MC, Basak A, Bradfield JP, Hammond RK, Boehm K, Berkowitz RI, Lasconi C, et al. Cis-regulatory architecture of human ESC-derived hypothalamic neuron differentiation aids in variant-to-gene mapping of relevant complex traits. Nature Communications. 12: 6749. PMID 34799566 DOI: 10.1038/s41467-021-27001-4   
2021 Cai Q, Wang JJ, Xie JT, Jiang DH, Keyhani NO. The Spt10 GNAT Superfamily Protein Modulates Development, Cell Cycle Progression and Virulence in the Fungal Insect Pathogen, . Journal of Fungi (Basel, Switzerland). 7. PMID 34829192 DOI: 10.3390/jof7110905   
2021 Kotarba G, Taracha-Wisniewska A, Miller M, Dabrowski M, Wilanowski T. Transcription factors Krüppel-like factor 4 and paired box 5 regulate the expression of the Grainyhead-like genes. Plos One. 16: e0257977. PMID 34570823 DOI: 10.1371/journal.pone.0257977   
2021 Haas E, Incebacak RD, Hentrich T, Huridou C, Schmidt T, Casadei N, Maringer Y, Bahl C, Zimmermann F, Mills JD, Aronica E, Riess O, Schulze-Hentrich JM, Hübener-Schmid J. A Novel SCA3 Knock-in Mouse Model Mimics the Human SCA3 Disease Phenotype Including Neuropathological, Behavioral, and Transcriptional Abnormalities Especially in Oligodendrocytes. Molecular Neurobiology. PMID 34716557 DOI: 10.1007/s12035-021-02610-8   
2021 Kim NJ, Lee KH, Son Y, Nam AR, Moon EH, Pyun JH, Park J, Kang JS, Lee YJ, Cho JY. Spatiotemporal expression of long noncoding RNA modulates heart cell lineage commitment. Rna Biology. 1-15. PMID 34755591 DOI: 10.1080/15476286.2021.1976549   
2021 Dai X, Tu X, Du B, Dong P, Sun S, Wang X, Sun J, Li G, Lu T, Zhong S, Li P. Chromatin and regulatory differentiation between bundle sheath and mesophyll cells in maize. The Plant Journal : For Cell and Molecular Biology. PMID 34783109 DOI: 10.1111/tpj.15586   
2021 Dhakal P, Strawn M, Samal A, Behura SK. Fetal Brain Elicits Sexually Conflicting Transcriptional Response to the Ablation of Uterine Forkhead Box A2 () in Mice. International Journal of Molecular Sciences. 22. PMID 34575858 DOI: 10.3390/ijms22189693   
2021 Markus BM, Boydston EA, Lourido S. CRISPR-Mediated Transcriptional Repression in Toxoplasma gondii. Msphere. e0047421. PMID 34643425 DOI: 10.1128/mSphere.00474-21   
2021 Mary N, Calgaro A, Barasc H, Bonnet N, Ferchaud S, Raymond-Letron I, Ducos A, Pinton A. Meiotic Silencing in Pigs: A Case Study in a Translocated Azoospermic Boar. Genes. 12. PMID 34440311 DOI: 10.3390/genes12081137   
2021 Fraser LCR, Dikdan RJ, Dey S, Singh A, Tyagi S. Reduction in gene expression noise by targeted increase in accessibility at gene loci. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34625470 DOI: 10.1073/pnas.2018640118   
2021 Ma Y, Long C, Liu G, Bai H, Ma L, Bai T, Zuo Y, Li S. WGBS combined with RNA-seq analysis revealed that Dnmt1 affects the methylation modification and gene expression changes during mouse oocyte vitrification. Theriogenology. 177: 11-21. PMID 34653792 DOI: 10.1016/j.theriogenology.2021.09.032   
2021 Johansson PA, Brattås PL, Douse CH, Hsieh P, Adami A, Pontis J, Grassi D, Garza R, Sozzi E, Cataldo R, Jönsson ME, Atacho DAM, Pircs K, Eren F, Sharma Y, et al. A cis-acting structural variation at the ZNF558 locus controls a gene regulatory network in human brain development. Cell Stem Cell. PMID 34624206 DOI: 10.1016/j.stem.2021.09.008   
2021 Dalle Carbonare L, Antoniazzi F, Gandini A, Orsi S, Bertacco J, Li Vigni V, Minoia A, Griggio F, Perduca M, Mottes M, Valenti MT. Two Novel C-Terminus RUNX2 Mutations in Two Cleidocranial Dysplasia (CCD) Patients Impairing p53 Expression. International Journal of Molecular Sciences. 22. PMID 34638677 DOI: 10.3390/ijms221910336   
2021 Desai VP, Chouaref J, Wu H, Pastor WA, Kan RL, Oey HM, Li Z, Ho J, Vonk KKD, San Leon Granado D, Christopher MA, Clark AT, Jacobsen SE, Daxinger L. The role of MORC3 in silencing transposable elements in mouse embryonic stem cells. Epigenetics & Chromatin. 14: 49. PMID 34706774 DOI: 10.1186/s13072-021-00420-9   
2021 Chung H, Parkhurst CN, Magee EM, Phillips D, Habibi E, Chen F, Yeung BZ, Waldman J, Artis D, Regev A. Joint single-cell measurements of nuclear proteins and RNA in vivo. Nature Methods. 18: 1204-1212. PMID 34608310 DOI: 10.1038/s41592-021-01278-1   
2021 Kumar S, Ruggles A, Logan S, Mazarakis A, Tyson T, Bates M, Grosse C, Reed D, Li Z, Grimwood J, Schmutz J, Saski C. Comparative Transcriptomics of Non-Embryogenic and Embryogenic Callus in Semi-Recalcitrant and Non-Recalcitrant Upland Cotton Lines. Plants (Basel, Switzerland). 10. PMID 34579308 DOI: 10.3390/plants10091775   
2021 Sun C, Zheng X, Sun Y, Yu J, Sheng M, Yan S, Zhu Q, Lan Q. Identification of IGF2BP3 as an Adverse Prognostic Biomarker of Gliomas. Frontiers in Genetics. 12: 743738. PMID 34721530 DOI: 10.3389/fgene.2021.743738   
2021 Wu S, Chen K, Xu T, Ma K, Gao L, Fu C, Zhang W, Jing C, Ren C, Deng M, Chen Y, Zhou Y, Pan W, Jia X. Tpr Deficiency Disrupts Erythroid Maturation With Impaired Chromatin Condensation in Zebrafish Embryogenesis. Frontiers in Cell and Developmental Biology. 9: 709923. PMID 34722501 DOI: 10.3389/fcell.2021.709923   
2021 Xiaoli L, Fengbin H, Shihui H, Xi N, Sheng L, Zhou W, Xueqin R, Jiafu W. Detection of genomic structure variants associated with wrinkled skin in Xiang pig by next generation sequencing. Aging. 13. PMID 34837693 DOI: 10.18632/aging.203711   
2021 Yang H, Na FY, Guo L, Liang X, Zhang RF. The landscape of DNA methylation in asthma: a data mining and validation. Bioengineered. PMID 34714718 DOI: 10.1080/21655979.2021.1997088   
2021 Chatterjee S, Karasaki KM, Fries LE, Kapoor A, Chakravarti A. A multi-enhancer regulatory code is disrupted in Hirschsprung disease. Genome Research. PMID 34782358 DOI: 10.1101/gr.275667.121   
2021 Naik A, Dalpatraj N, Thakur N. Global Histone H3 Lysine 4 Trimethylation (H3K4me3) Landscape Changes in Response to TGFβ. Epigenetics Insights. 14: 25168657211051755. PMID 34671716 DOI: 10.1177/25168657211051755   
2021 Chiba Y, Yoshizaki K, Tian T, Miyazaki K, Martin D, , Saito K, Yamada A, Fukumoto S. Integration of Single-Cell RNA- and CAGE-seq Reveals Tooth-Enriched Genes. Journal of Dental Research. 220345211049785. PMID 34806461 DOI: 10.1177/00220345211049785   
2021 Liu Y, Gu Z, Cao H, Kaphle P, Lyu J, Zhang Y, Hu W, Chung SS, Dickerson KE, Xu J. Convergence of oncogenic cooperation at single-cell and single-gene levels drives leukemic transformation. Nature Communications. 12: 6323. PMID 34732703 DOI: 10.1038/s41467-021-26582-4   
2021 Sakai Y, Ohba K, Sasaki S, Matsushita A, Nakamura HM, Kuroda G, Tsuriya D, Yamashita M, Suda T. Impairment of the Hypothalamus-Pituitary-Thyroid Axis Caused by Naturally Occurring Mutations In Vitro. International Journal of Molecular Sciences. 22. PMID 34576178 DOI: 10.3390/ijms221810015   
2021 Jeon S, Kim MM. The down-regulation of melanogenesis via MITF and FOXO1 signaling pathways in SIRT1 knockout cells using CRISPR/Cas9 system. Journal of Biotechnology. PMID 34757047 DOI: 10.1016/j.jbiotec.2021.10.005   
2021 Mei L, Huang Y, Wu X, He H, Ye R, Ma J, He X, Shi Y, Li P. Mutations in Associated With Premature Ovarian Insufficiency in a Chinese Population. Frontiers in Medicine. 8: 714306. PMID 34778283 DOI: 10.3389/fmed.2021.714306   
2021 Quan X, Zhao C, Gao Z, Zhang Y, Zhao R, Wang J, Zhang Q. DDX10 and BYSL as the potential targets of chondrosarcoma and glioma. Medicine. 100: e27669. PMID 34797290 DOI: 10.1097/MD.0000000000027669   
2021 Zhang H, Wu J, Li Y, Jin G, Tian Y, Kang S. Identification of Key Differentially Methylated/Expressed Genes and Pathways for Ovarian Endometriosis by Bioinformatics Analysis. Reproductive Sciences (Thousand Oaks, Calif.). PMID 34671938 DOI: 10.1007/s43032-021-00751-8   
2021 Gutherz OR, Deyssenroth M, Li Q, Hao K, Jacobson JL, Chen J, Jacobson SW, Colin Carter R. Potential roles of imprinted genes in the teratogenic effects of alcohol on the placenta, somatic growth, and the developing brain. Experimental Neurology. 113919. PMID 34752786 DOI: 10.1016/j.expneurol.2021.113919   
2021 Cha HJ, Uyan Ö, Kai Y, Liu T, Zhu Q, Tothova Z, Botten GA, Xu J, Yuan GC, Dekker J, Orkin SH. Inner nuclear protein Matrin-3 coordinates cell differentiation by stabilizing chromatin architecture. Nature Communications. 12: 6241. PMID 34716321 DOI: 10.1038/s41467-021-26574-4   
2021 Tierney ARP, Chin CY, Weiss DS, Rather PN. A LysR-Type Transcriptional Regulator Controls Multiple Phenotypes in . Frontiers in Cellular and Infection Microbiology. 11: 778331. PMID 34805000 DOI: 10.3389/fcimb.2021.778331   
2021 Falzarano MS, Rossi R, Grilli A, Fang M, Osman H, Sabatelli P, Antoniel M, Lu Z, Li W, Selvatici R, Al-Khalili C, Gualandi F, Bicciato S, Torelli S, Ferlini A. Urine-Derived Stem Cells Express 571 Neuromuscular Disorders Causing Genes, Making Them a Potential Model for Rare Genetic Diseases. Frontiers in Physiology. 12: 716471. PMID 34744760 DOI: 10.3389/fphys.2021.716471   
2021 Karengera A, Bao C, Riksen JAG, van Veelen HPJ, Sterken MG, Kammenga JE, Murk AJ, Dinkla IJT. Development of a transcription-based bioanalytical tool to quantify the toxic potencies of hydrophilic compounds in water using the nematode Caenorhabditis elegans. Ecotoxicology and Environmental Safety. 227: 112923. PMID 34700171 DOI: 10.1016/j.ecoenv.2021.112923