Vasilis Z. Marmarelis, Ph.D. - Related publications

Biomedical Engineering University of Southern California, Los Angeles, CA, United States 
Neuronal Systems Modeling
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Becker D, Bremer V, Funk B, Hoogendoorn M, Rocha A, Riper H. Evaluation of a temporal causal model for predicting the mood of clients in an online therapy. Evidence-Based Mental Health. 23: 27-33. PMID 32046990 DOI: 10.1136/ebmental-2019-300135   
2020 Yuan M, Li Y, Yang Y, Xu J, Tao F, Zhao L, Zhou H, Pinheiro J, Xu XS. A novel quantification of information for longitudinal data analyzed by mixed-effects modeling. Pharmaceutical Statistics. PMID 31989784 DOI: 10.1002/pst.1996   
2020 Guo Q, Dai F, Zhao Z. Comparison of Two Bayesian-MCMC Inversion Methods for Laboratory Infiltration and Field Irrigation Experiments. International Journal of Environmental Research and Public Health. 17. PMID 32050535 DOI: 10.3390/ijerph17031108   
2020 Pfaller MR, Cruz Varona M, Lang J, Bertoglio C, Wall WA. Using parametric model order reduction for inverse analysis of large nonlinear cardiac simulations. International Journal For Numerical Methods in Biomedical Engineering. PMID 32022424 DOI: 10.1002/cnm.3320   
2020 Qian G, Mahdi A. Sensitivity analysis methods in the biomedical sciences. Mathematical Biosciences. 108306. PMID 31953192 DOI: 10.1016/j.mbs.2020.108306   
2020 Bui DT, Khosravi K, Karimi M, Busico G, Khozani ZS, Nguyen H, Mastrocicco M, Tedesco D, Cuoco E, Kazakis N. Enhancing nitrate and strontium concentration prediction in groundwater by using new data mining algorithm. The Science of the Total Environment. 715: 136836. PMID 32007881 DOI: 10.1016/j.scitotenv.2020.136836   
2020 Schmutz A, Chèze L, Jacques J, Martin P. A Method to Estimate Horse Speed per Stride from One IMU with a Machine Learning Method. Sensors (Basel, Switzerland). 20. PMID 31963422 DOI: 10.3390/s20020518   
2020 Liu H, Morris ED. Model Comparison Metrics Require Adaptive Correction if Parameters are Discretized: Proof-of-Concept Applied to Transient Signals in Dynamic PET. Ieee Transactions On Medical Imaging. PMID 32031932 DOI: 10.1109/TMI.2020.2969425   
2020 Savic N, Lee EG, Gasic B, Vernez D. TREXMO plus: an advanced self-learning model for occupational exposure assessment. Journal of Exposure Science & Environmental Epidemiology. PMID 32015431 DOI: 10.1038/s41370-020-0203-9   
2020 Sadino-Riquelme C, Rivas J, Jeison D, Hayes RE, Donoso-Bravo A. Making Sense of Parameter Estimation and Model Simulation in Bioprocesses. Biotechnology and Bioengineering. PMID 32017025 DOI: 10.1002/bit.27294   
2020 Zavatone-Veth JA, Badwan BA, Clark DA. A minimal synaptic model for direction selective neurons in Drosophila. Journal of Vision. 20: 2. PMID 32040161 DOI: 10.1167/jov.20.2.2   
2020 Zavatone-Veth JA, Badwan BA, Clark DA. A minimal synaptic model for direction selective neurons in Drosophila. Journal of Vision. 20: 2. PMID 32040161 DOI: 10.1167/jov.20.2.2   
2020 Rybiński M, Möller S, Sunnåker M, Lormeau C, Stelling J. TopoFilter: a MATLAB package for mechanistic model identification in systems biology. Bmc Bioinformatics. 21: 34. PMID 31996136 DOI: 10.1186/s12859-020-3343-y   
2020 Abdulali A, Atadjanov IR, Jeon S. Visually Guided Acquisition of Contact Dynamics and Case Study in Data-Driven Haptic Texture Modeling. Ieee Transactions On Haptics. PMID 31940552 DOI: 10.1109/TOH.2020.2965449   
2020 Benes B, Guan K, Lang M, Long SP, Lynch JP, Marshall-Colón A, Peng B, Schnable J, Sweetlove L, Turk M. Multiscale computational models can guide experimentation and targeted measurements for crop improvement. The Plant Journal : For Cell and Molecular Biology. PMID 32053236 DOI: 10.1111/tpj.14722   
2020 Ning J, Cai C, Chen Y, Huang X, Wang MC. Semiparametric modelling and estimation of covariate-adjusted dependence between bivariate recurrent events. Biometrics. PMID 31994170 DOI: 10.1111/biom.13229   
2020 Garman ER, Meyer JS, Bergeron CM, Blewett TA, Clements WH, Elias MC, Farley KJ, Gissi F, Ryan AC. Validation of Bioavailability-Based Toxicity Models for Metals. Environmental Toxicology and Chemistry. 39: 101-117. PMID 31880834 DOI: 10.1002/etc.4563   
2020 Medlock GL, Papin JA. Guiding the Refinement of Biochemical Knowledgebases with Ensembles of Metabolic Networks and Machine Learning. Cell Systems. 10: 109-119.e3. PMID 31926940 DOI: 10.1016/j.cels.2019.11.006   
2020 Tran SN, Garcez AD, Weyde T, Yin J, Zhang Q, Karunanithi M. Sequence Classification Restricted Boltzmann Machines With Gated Units. Ieee Transactions On Neural Networks and Learning Systems. PMID 31940559 DOI: 10.1109/TNNLS.2019.2958103   
2020 Lucchese LV, de Oliveira GG, Pedrollo OC. Attribute selection using correlations and principal components for artificial neural networks employment for landslide susceptibility assessment. Environmental Monitoring and Assessment. 192: 129. PMID 31965339 DOI: 10.1007/s10661-019-7968-0   
2020 Abbasi S, Maran S, Jaeger D. A general method to generate artificial spike train populations matching recorded neurons. Journal of Computational Neuroscience. PMID 31974719 DOI: 10.1007/s10827-020-00741-w   
2020 Gao X, Xie W, Chen S, Yang J, Chen B. The Prediction of Human Abdominal Adiposity Based on the Combination of a Particle Swarm Algorithm and Support Vector Machine. International Journal of Environmental Research and Public Health. 17. PMID 32050578 DOI: 10.3390/ijerph17031117   
2020 Du Z, Yang H, Lv WJ, Zhang XY, Zhai HL. Prediction of the inhibitory concentrations of chloroquine derivatives using Deep Neural Networks models. Journal of Biomolecular Structure & Dynamics. 1-21. PMID 31918625 DOI: 10.1080/07391102.2020.1714486   
2020 Guan D, Lui R, Matthews S. LogP prediction performance with the SMD solvation model and the M06 density functional family for SAMPL6 blind prediction challenge molecules. Journal of Computer-Aided Molecular Design. PMID 31939103 DOI: 10.1007/s10822-020-00278-1   
2020 Nápoles G, Jastrzębska A, Mosquera C, Vanhoof K, Homenda W. Deterministic learning of hybrid Fuzzy Cognitive Maps and network reduction approaches. Neural Networks : the Official Journal of the International Neural Network Society. 124: 258-268. PMID 32032855 DOI: 10.1016/j.neunet.2020.01.019   
2020 Di Achille P, Parikh J, Khamzin S, Solovyova O, Kozloski J, Gurev V. Model order reduction for left ventricular mechanics via congruency training. Plos One. 15: e0219876. PMID 31905197 DOI: 10.1371/journal.pone.0219876   
2020 Tang R, Kanamori R, Yamamoto T. Improving Coverage Rate for Urban Link Travel Time Prediction Using Probe Data in the Low Penetration Rate Environment. Sensors (Basel, Switzerland). 20. PMID 31906466 DOI: 10.3390/s20010265   
2020 Chowdhury AJ, Yang W, Abdelfatah KE, Zare M, Heyden A, Terejanu GA. A Multiple Filter Based Neural Network Approach to the Extrapolation of Adsorption Energies on Metal Surfaces for Catalysis Applications. Journal of Chemical Theory and Computation. PMID 31962041 DOI: 10.1021/acs.jctc.9b00986   
2020 Joseph MB. Neural hierarchical models of ecological populations. Ecology Letters. PMID 31970895 DOI: 10.1111/ele.13462   
2020 Franklin JB, Sathish T, Vinithkumar NV, Kirubagaran R. A novel approach to predict chlorophyll-a in coastal-marine ecosystems using multiple linear regression and principal component scores. Marine Pollution Bulletin. 152: 110902. PMID 31957679 DOI: 10.1016/j.marpolbul.2020.110902   
2020 Banwarth-Kuhn M, Sindi SS. How and Why to Build a Mathematical Model: A Case Study Using Prion Aggregation. The Journal of Biological Chemistry. PMID 32005659 DOI: 10.1074/jbc.REV119.009851   
2020 Shi C, Gao ZY, Zhang QL, Yao SJ, Slater NKH, Lin DQ. Model-based process development of continuous chromatography for antibody capture: A case study with twin-column system. Journal of Chromatography. A. 460936. PMID 32037074 DOI: 10.1016/j.chroma.2020.460936   
2020 Li Z, Liu L, Fan Y, Xi J. Kinetic modeling for high voltage electrical discharge extraction based on discharge energy input. Food Chemistry. 314: 126168. PMID 31951889 DOI: 10.1016/j.foodchem.2020.126168   
2020 Kim SY, Bechle M, Hankey S, Sheppard L, Szpiro AA, Marshall JD. Concentrations of criteria pollutants in the contiguous U.S., 1979 - 2015: Role of prediction model parsimony in integrated empirical geographic regression. Plos One. 15: e0228535. PMID 32069301 DOI: 10.1371/journal.pone.0228535   
2020 Singh D, Singh Sisodia D, Singh P. Compositional Framework for Multitask Learning in the Identification of Cleavage Sites of HIV-1 protease. Journal of Biomedical Informatics. 103376. PMID 31935461 DOI: 10.1016/j.jbi.2020.103376   
2020 Ahmed MS, Genin M. A functional-model-adjusted spatial scan statistic. Statistics in Medicine. PMID 31965600 DOI: 10.1002/sim.8459   
2020 de Oliveira RR, Avila C, Bourne R, Muller F, de Juan A. Data fusion strategies to combine sensor and multivariate model outputs for multivariate statistical process control. Analytical and Bioanalytical Chemistry. PMID 31960081 DOI: 10.1007/s00216-020-02404-2   
2020 Chatterjee P, Glimm T, Kaźmierczak B. Mathematical modeling of chondrogenic pattern formation during limb development: Recent advances in continuous models. Mathematical Biosciences. 108319. PMID 32001201 DOI: 10.1016/j.mbs.2020.108319   
2020 Hong M, Jacobucci R, Lubke G. Deductive data mining. Psychological Methods. PMID 31916800 DOI: 10.1037/met0000252   
2020 de Oliveira AG, Ventura TM, Ganchev TD, Silva LNS, Marques MI, Schuchmann KL. Speeding up training of automated bird recognizers by data reduction of audio features. Peerj. 8: e8407. PMID 32025373 DOI: 10.7717/peerj.8407   
2020 Nahmias D, Cohen A, Nissim N, Elovici Y. Deep feature transfer learning for trusted and automated malware signature generation in private cloud environments. Neural Networks : the Official Journal of the International Neural Network Society. 124: 243-257. PMID 32028053 DOI: 10.1016/j.neunet.2020.01.003   
2020 Melinscak F, Bach DR. Computational optimization of associative learning experiments. Plos Computational Biology. 16: e1007593. PMID 31905214 DOI: 10.1371/journal.pcbi.1007593   
2020 Gardiner BS, Smith DW, Lee CJ, Ngo JP, Evans RG. What's the point of modelling in physiology? Renal oxygenation is a good example. Acta Physiologica (Oxford, England). e13450. PMID 32012449 DOI: 10.1111/apha.13450   
2020 Allamsetty S, Mohapatro S, Kumar P. Prediction of voltage required for nonthermal plasma based diesel exhaust treatment for removal of nitrogen oxides. Environmental Science and Pollution Research International. PMID 31960241 DOI: 10.1007/s11356-020-07726-3   
2020 Ma L, Shen Y, Li J. A neural-network-based hysteresis model for piezoelectric actuators. The Review of Scientific Instruments. 91: 015002. PMID 32012591 DOI: 10.1063/1.5121471   
2020 Allahbakhshi H, Conrow L, Naimi B, Weibel R. Using Accelerometer and GPS Data for Real-Life Physical Activity Type Detection. Sensors (Basel, Switzerland). 20. PMID 31973129 DOI: 10.3390/s20030588   
2020 Noack MM, Doerk GS, Li R, Fukuto M, Yager KG. Advances in Kriging-Based Autonomous X-Ray Scattering Experiments. Scientific Reports. 10: 1325. PMID 31992725 DOI: 10.1038/s41598-020-57887-x   
2020 Agrawal DK, Dolan EM, Hernandez NE, Blacklock KM, Khare SD, Sontag ED. Mathematical Models of Protease-Based Enzymatic Biosensors. Acs Synthetic Biology. PMID 32017536 DOI: 10.1021/acssynbio.9b00279   
2020 Staicu AM, Islam MN, Dumitru R, van Heugten E. Longitudinal dynamic functional regression. Journal of the Royal Statistical Society. Series C, Applied Statistics. 69: 25-46. PMID 31929657 DOI: 10.1111/rssc.12376   
2020 Chen L, Fu J, Wu Y, Li H, Zheng B. Hand Gesture Recognition Using Compact CNN Via Surface Electromyography Signals. Sensors (Basel, Switzerland). 20. PMID 31991849 DOI: 10.3390/s20030672