John B. Gurdon - Related publications

University of Cambridge, Cambridge, England, United Kingdom 
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Tarbier M, Mackowiak SD, Frade J, Catuara-Solarz S, Biryukova I, Gelali E, Menéndez DB, Zapata L, Ossowski S, Bienko M, Gallant CJ, Friedländer MR. Nuclear gene proximity and protein interactions shape transcript covariations in mammalian single cells. Nature Communications. 11: 5445. PMID 33116115 DOI: 10.1038/s41467-020-19011-5   
2020 Adlat S, Sah RK, Hayel F, Chen Y, Bah FB, Al-Azab M, Bahadar N, Myint M, Oo ZM, Nasser MI, Zhang L, Feng X, Zheng Y. Global transcriptome study of Dip2B-deficient mouse embryonic lung fibroblast reveals its important roles in cell proliferation and development. Computational and Structural Biotechnology Journal. 18: 2381-2390. PMID 33005301 DOI: 10.1016/j.csbj.2020.08.030   
2020 Sun Y, Yu Q, Li L, Mei Z, Zhou B, Liu S, Pan T, Wu L, Lei Y, Liu L, Drmanac R, Ma K, Liu S. Single-cell RNA profiling links ncRNAs to spatiotemporal gene expression during C. elegans embryogenesis. Scientific Reports. 10: 18863. PMID 33139759 DOI: 10.1038/s41598-020-75801-3   
2020 Levy O, Amit G, Vaknin D, Snir T, Efroni S, Castaldi P, Liu YY, Cohen HY, Bashan A. Age-related loss of gene-to-gene transcriptional coordination among single cells. Nature Metabolism. PMID 33139959 DOI: 10.1038/s42255-020-00304-4   
2020 Gómez-Saldivar G, Osuna-Luque J, Semple JI, Glauser DA, Jarriault S, Meister P. Tissue-Specific Transcription Footprinting Using NoI Dam (RAPID) in . Genetics. PMID 33037050 DOI: 10.1534/genetics.120.303774   
2020 Jasenosky LD, Nambu A, Tsytsykova AV, Ranjbar S, Haridas V, Kruidenier L, Tough DF, Goldfeld AE. Identification of a Distal Locus Enhancer Element That Controls Cell Type-Specific and Gene Expression in Human T Cells. Journal of Immunology (Baltimore, Md. : 1950). PMID 32978279 DOI: 10.4049/jimmunol.1901311   
2020 Ma S, Zhang B, LaFave LM, Earl AS, Chiang Z, Hu Y, Ding J, Brack A, Kartha VK, Tay T, Law T, Lareau C, Hsu YC, Regev A, Buenrostro JD. Chromatin Potential Identified by Shared Single-Cell Profiling of RNA and Chromatin. Cell. PMID 33098772 DOI: 10.1016/j.cell.2020.09.056   
2020 Xu H, Wang J, Liang Y, Fu Y, Li S, Huang J, Xu H, Zou W, Chen B. TriTag: an integrative tool to correlate chromatin dynamics and gene expression in living cells. Nucleic Acids Research. PMID 33104788 DOI: 10.1093/nar/gkaa906   
2020 Ziegler N, Bader E, Epanchintsev A, Margerie D, Kannt A, Schmoll D. AMPKβ1 and AMPKβ2 define an isoform-specific gene signature in human pluripotent stem cells, differentially mediating cardiac lineage specification. The Journal of Biological Chemistry. PMID 33067322 DOI: 10.1074/jbc.RA120.013990   
2020 An SY, Lee M, Yoon HK, Abekura F, Kim KS, Kim DH, Kim HJ, Lee K, Kim CH, Lee YC. Regulation of human β-galactoside α2,6-sialyltransferase (hST6Gal I) gene expression during differentiation of human osteoblastic MG-63 cells. Glycoconjugate Journal. PMID 33108606 DOI: 10.1007/s10719-020-09959-3   
2020 Hallikas O, Das Roy R, Christensen MM, Renvoisé E, Sulic AM, Jernvall J. System-level analyses of keystone genes required for mammalian tooth development. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. PMID 33128445 DOI: 10.1002/jez.b.23009   
2020 Tsai A, Galupa R, Crocker J. Robust and efficient gene regulation through localized nuclear microenvironments. Development (Cambridge, England). 147. PMID 33020073 DOI: 10.1242/dev.161430   
2020 Zarnack K, Balasubramanian S, Gantier MP, Kunetsky V, Kracht M, Schmitz ML, Sträßer K. Dynamic mRNP Remodeling in Response to Internal and External Stimuli. Biomolecules. 10. PMID 32932892 DOI: 10.3390/biom10091310   
2020 Terzi Cizmecioglu N, Huang J, Keskin EG, Wang X, Esen I, Chen F, Orkin SH. Arid4b is critical for mouse embryonic stem cell differentiation towards mesoderm and endoderm, linking epigenetics to pluripotency exit. The Journal of Biological Chemistry. PMID 33060200 DOI: 10.1074/jbc.RA120.015534   
2020 Rengaraj D, Won S, Han JW, Yoo D, Kim H, Han JY. Whole-Transcriptome Sequencing-Based Analysis of and Its Interacting Genes during Germ Cells Specification and Zygotic Genome Activation in Chickens. International Journal of Molecular Sciences. 21. PMID 33142918 DOI: 10.3390/ijms21218170   
2020 Zhao T, Lyu S, Lu G, Juan L, Zeng X, Wei Z, Hao J, Peng J. SC2disease: a manually curated database of single-cell transcriptome for human diseases. Nucleic Acids Research. PMID 33010177 DOI: 10.1093/nar/gkaa838   
2020 Oh JN, Lee M, Choe GC, Lee DK, Choi KH, Kim SH, Jeong J, Lee CK. Identification of the Lineage Markers and Inhibition of in In Vitro Fertilized Porcine Embryos. International Journal of Molecular Sciences. 21. PMID 33019677 DOI: 10.3390/ijms21197275   
2020 Peng L, Li EM, Xu LY. From start to end: phase separation and transcriptional regulation. Biochimica Et Biophysica Acta. Gene Regulatory Mechanisms. 194641. PMID 33017669 DOI: 10.1016/j.bbagrm.2020.194641   
2020 Wang H, Wang M, Wen Y, Xu C, Chen X, Wu D, Su P, Zhou W, Cheng T, Shi L, Zhou J. Biphasic Regulation of Mesenchymal Genes Controls Fate Switches During Hematopoietic Differentiation of Human Pluripotent Stem Cells. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). 7: 2001019. PMID 33101849 DOI: 10.1002/advs.202001019   
2020 Bryja A, Sujka-Kordowska P, Konwerska A, Ciesiółka S, Wieczorkiewicz M, Bukowska D, Antosik P, Bryl R, Skowroński MT, Jaśkowski JM, Mozdziak P, Angelova Volponi A, Shibli JA, Kempisty B, Dyszkiewicz-Konwińska M. New Gene Markers Involved in Molecular Processes of Tissue Repair, Response to Wounding and Regeneration Are Differently Expressed in Fibroblasts from Porcine Oral Mucosa during Long-Term Primary Culture. Animals : An Open Access Journal From Mdpi. 10. PMID 33105567 DOI: 10.3390/ani10111938   
2020 Modesto P, Fernandez JLC, Martini I, Zoccola R, Pugliano MC, Ciucis CG, Goria M, Ferrari A, Razzuoli E. Characterization of D-17 Canine Osteosarcoma Cell Line and Evaluation of Its Ability to Response to Infective Stressor Used as Alternative Anticancer Therapy. Animals : An Open Access Journal From Mdpi. 10. PMID 33126659 DOI: 10.3390/ani10111981   
2020 Robert VJ, Knutson AK, Rechtsteiner A, Garvis S, Yvert G, Strome S, Palladino F. SET1/COMPASS Maintains Germline Identity by Preventing Transcriptional Deregulation Across Generations. Frontiers in Cell and Developmental Biology. 8: 561791. PMID 33072747 DOI: 10.3389/fcell.2020.561791   
2020 Hu Y, Zhong J, Xiao Y, Xing Z, Sheu K, Fan S, An Q, Qiu Y, Zheng Y, Liu X, Fan G, Liu Y. Single-cell RNA cap and tail sequencing (scRCAT-seq) reveals subtype-specific isoforms differing in transcript demarcation. Nature Communications. 11: 5148. PMID 33051455 DOI: 10.1038/s41467-020-18976-7   
2020 Corbett DC, Fabyan WB, Grigoryan B, O'Connor CE, Johansson F, Batalov I, Regier MC, DeForest CA, Miller JS, Stevens KR. Thermofluidic heat exchangers for actuation of transcription in artificial tissues. Science Advances. 6. PMID 32998880 DOI: 10.1126/sciadv.abb9062   
2020 Rice C, Macdonald SJ, Wang X, Ward RE. The Broad Transcription Factor Links Hormonal Signaling, Gene Expression and Cellular Morphogenesis Events During Imaginal Disc Development. Genetics. PMID 33115752 DOI: 10.1534/genetics.120.303717   
2020 Couture R, Martin LJ. The transcription factors SF-1 and SOX8 cooperate to upregulate expression in mouse TM4 sertoli cells. Biochemistry and Biophysics Reports. 24: 100828. PMID 33088929 DOI: 10.1016/j.bbrep.2020.100828   
2020 Polkoff KM, Chung J, Simpson SG, Gleason K, Piedrahita JA. Validation of Transgene Expression in Gene-Edited Pigs Using CRISPR Transcriptional Activators. The Crispr Journal. 3: 409-418. PMID 33095051 DOI: 10.1089/crispr.2020.0037   
2020 Bui TT, Lee D, Selvarajoo K. ScatLay: utilizing transcriptome-wide noise for identifying and visualizing differentially expressed genes. Scientific Reports. 10: 17483. PMID 33060728 DOI: 10.1038/s41598-020-74564-1   
2020 Gouveia GR, Ferreira SC, Siqueira SAC, de Pádua Covas Lage LA, Hallack Neto AE, de Oliveira Costa R, Pereira J. Overexpression of OCT-1 gene is a biomarker of adverse prognosis for diffuse large B-cell lymphoma (DLBCL): data from a retrospective cohort of 77 Brazilian patients. Bmc Cancer. 20: 1041. PMID 33121489 DOI: 10.1186/s12885-020-07553-2   
2020 Leszczyński P, Śmiech M, Salam Teeli A, Haque E, Viger R, Ogawa H, Pierzchała M, Taniguchi H. Deletion of the Gene Causes a Neuronal Differentiation Deficiency in P19 Cells. International Journal of Molecular Sciences. 21. PMID 33003409 DOI: 10.3390/ijms21197192   
2020 Leszczyński P, Śmiech M, Salam Teeli A, Haque E, Viger R, Ogawa H, Pierzchała M, Taniguchi H. Deletion of the Gene Causes a Neuronal Differentiation Deficiency in P19 Cells. International Journal of Molecular Sciences. 21. PMID 33003409 DOI: 10.3390/ijms21197192   
2020 Men S, Yu Y. Prospects for Use of Single-Cell Sequencing to Assess DNA Methylation in Asthma. Medical Science Monitor : International Medical Journal of Experimental and Clinical Research. 26: e925514. PMID 33009362 DOI: 10.12659/MSM.925514   
2020 Serizay J, Dong Y, Janes J, Chesney M, Cerrato C, Ahringer J. Distinctive regulatory architectures of germline-active and somatic genes in . Genome Research. PMID 33093068 DOI: 10.1101/gr.265934.120   
2020 Meng C, Kunliu, Lv Z, Zhang Y, Li J, Luo X, Qiang H, Li K, Liu F, Zhang B, Cui F. Inflammation and Immunity Gene Expression Profiling of Macrophages on Mineralized Collagen. Journal of Biomedical Materials Research. Part A. PMID 33089616 DOI: 10.1002/jbm.a.37124   
2020 Aljazi MB, Gao Y, Wu Y, Mias GI, He J. Cell Signaling Coordinates Global PRC2 Recruitment and Developmental Gene Expression in Murine Embryonic Stem Cells. Iscience. 23: 101646. PMID 33103084 DOI: 10.1016/j.isci.2020.101646   
2020 Khundmiri SJ, Chen L, Lederer ED, Yang CR, Knepper MA. Transcriptomes of Major Proximal Tubule Cell Culture Models. Journal of the American Society of Nephrology : Jasn. PMID 33122286 DOI: 10.1681/ASN.2020010009   
2020 Yan P, Lu JY, Niu J, Gao J, Zhang MQ, Yin Y, Shen X. LncRNA Platr22 promotes super-enhancer activity and stem cell pluripotency. Journal of Molecular Cell Biology. PMID 33049031 DOI: 10.1093/jmcb/mjaa056   
2020 Ayers MC, Sherman ZN, Gallagher JEG. Oxidative Stress Responses and Nutrient Starvation in MCHM Treated . G3 (Bethesda, Md.). PMID 33109726 DOI: 10.1534/g3.120.401661   
2020 Jefferies G, Somers J, Lohrey I, Chaturvedi V, Calabria J, Marshall OJ, Southall TD, Saint R, Murray MJ. Maintenance of Cell Fate by the Polycomb Group Gene Sex Combs Extra Enables a Partial Epithelial Mesenchymal Transition in . G3 (Bethesda, Md.). PMID 33051260 DOI: 10.1534/g3.120.401785   
2020 Wang Z, Sheng C, Kan G, Yao C, Geng R, Chen S. RNAi Screening Identifies that TEX10 Promotes the Proliferation of Colorectal Cancer Cells by Increasing NF-B Activation. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). 7: 2000593. PMID 32995120 DOI: 10.1002/advs.202000593   
2020 Yu B, Doni Jayavelu N, Battle SL, Mar JC, Schimmel T, Cohen J, Hawkins RD. Single-cell analysis of transcriptome and DNA methylome in human oocyte maturation. Plos One. 15: e0241698. PMID 33152014 DOI: 10.1371/journal.pone.0241698   
2020 Kirtana R, Manna S, Patra SK. Molecular mechanisms of KDM5A in cellular functions: Facets during development and disease. Experimental Cell Research. 112314. PMID 33010254 DOI: 10.1016/j.yexcr.2020.112314   
2020 Kirtana R, Manna S, Patra SK. Molecular mechanisms of KDM5A in cellular functions: Facets during development and disease. Experimental Cell Research. 112314. PMID 33010254 DOI: 10.1016/j.yexcr.2020.112314   
2020 Marsico TV, Caetano DP, Rodrigues R, Valente RS, Fontes PK, Mesquita FS, Andrade SCDS, Basso AC, Nogueira MFG, Sudano MJ. Transcriptional profiling of embryo cryotolerance. Molecular Reproduction and Development. PMID 33156526 DOI: 10.1002/mrd.23436   
2020 Li L, Li Y, Timothy Sembiring Meliala I, Kasim V, Wu S. Biological roles of Yin Yang 2: Its implications in physiological and pathological events. Journal of Cellular and Molecular Medicine. PMID 32969187 DOI: 10.1111/jcmm.15919   
2020 Deschepper CF. Regulatory effects of the Uty/Ddx3y locus on neighboring chromosome Y genes and autosomal mRNA transcripts in adult mouse non-reproductive cells. Scientific Reports. 10: 14900. PMID 32913328 DOI: 10.1038/s41598-020-71447-3   
2020 Coppola U, Kamal AK, Stolfi A, Ristoratore F. The -Regulatory Code for 21/30 Specific Expression in Sensory Organs. Frontiers in Cell and Developmental Biology. 8: 569601. PMID 33043001 DOI: 10.3389/fcell.2020.569601   
2020 Ishishita S, Tatsumoto S, Kinoshita K, Nunome M, Suzuki T, Go Y, Matsuda Y. Transcriptome analysis revealed misregulated gene expression in blastoderms of interspecific chicken and Japanese quail F1 hybrids. Plos One. 15: e0240183. PMID 33044996 DOI: 10.1371/journal.pone.0240183   
2020 Jing H, Chen Y, Liang W, Chen M, Qiu C, Guo MY. Effects of Selenium on MAC-T Cells in Bovine Mastitis: Transcriptome Analysis of Exosomal mRNA Interactions. Biological Trace Element Research. PMID 33098075 DOI: 10.1007/s12011-020-02439-7   
2020 Kwak M, Erdag G, Slingluff CL. Gene expression analysis in formalin fixed paraffin embedded melanomas is associated with density of corresponding immune cells in those tissues. Scientific Reports. 10: 18336. PMID 33110110 DOI: 10.1038/s41598-020-74996-9