Floyd E. Bloom, M.D. - Related publications

Scripps Research Institute, La Jolla, La Jolla, CA, United States 
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Sikorski PJ, Warminski M, Kubacka D, Ratajczak T, Nowis D, Kowalska J, Jemielity J. The identity and methylation status of the first transcribed nucleotide in eukaryotic mRNA 5' cap modulates protein expression in living cells. Nucleic Acids Research. PMID 31984425 DOI: 10.1093/nar/gkaa032   
2020 Dawson PA, Weerasekera SJ, Atcheson RJ, Twomey SA, Simmons DG. Molecular analysis of the human placental cysteine dioxygenase type 1 gene. Molecular Genetics and Metabolism Reports. 22: 100568. PMID 32055444 DOI: 10.1016/j.ymgmr.2020.100568   
2020 Chaudhuri A, Das S, Das B. Localization elements and zip codes in the intracellular transport and localization of messenger RNAs in Saccharomyces cerevisiae. Wiley Interdisciplinary Reviews. Rna. e1591. PMID 32101377 DOI: 10.1002/wrna.1591   
2020 Maquat LE. Short interspersed nuclear element (SINE)-mediated post-transcriptional effects on human and mouse gene expression: SINE-UP for active duty. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 375: 20190344. PMID 32075563 DOI: 10.1098/rstb.2019.0344   
2020 Arya S, Lin Q, Zhou N, Gao X, Huang JD. Strong Immune Responses Induced by Direct Local Injections of Modified mRNA-Lipid Nanocomplexes. Molecular Therapy. Nucleic Acids. 19: 1098-1109. PMID 32059336 DOI: 10.1016/j.omtn.2019.12.044   
2020 Arya S, Lin Q, Zhou N, Gao X, Huang JD. Strong Immune Responses Induced by Direct Local Injections of Modified mRNA-Lipid Nanocomplexes. Molecular Therapy. Nucleic Acids. 19: 1098-1109. PMID 32059336 DOI: 10.1016/j.omtn.2019.12.044   
2020 Nguyen TG, Vargas-Blanco DA, Roberts LA, Shell SS. The impact of leadered and leaderless gene structures on translation efficiency, transcript stability, and predicted transcription rates in . Journal of Bacteriology. PMID 32094162 DOI: 10.1128/JB.00746-19   
2020 Helman G, Takanohashi A, Hagemann TL, Perng MD, Walkiewicz M, Woidill S, Sase S, Cross Z, Du Y, Zhao L, Waldman A, Haake BC, Fatemi A, Brenner M, Sherbini O, et al. Type II Alexander disease caused by splicing errors and aberrant overexpression of an uncharacterized GFAP isoform. Human Mutation. PMID 32126152 DOI: 10.1002/humu.24008   
2020 Weng Y, Li C, Yang T, Hu B, Zhang M, Guo S, Xiao H, Liang XJ, Huang Y. The challenge and prospect of mRNA therapeutics landscape. Biotechnology Advances. 107534. PMID 32088327 DOI: 10.1016/j.biotechadv.2020.107534   
2020 Ceol M, Gianesello L, Tosetto E, Priante G, Del Prete D, Anglani F. 5'UTR isoforms in human kidneys: differential expression analysis between controls and patients with glomerulonephritis. Journal of Investigative Medicine : the Official Publication of the American Federation For Clinical Research. PMID 32019767 DOI: 10.1136/jim-2019-001205   
2020 Merino GA, Fernández EA. Differential splicing analysis based on isoforms expression with NBSplice. Journal of Biomedical Informatics. 103: 103378. PMID 31972288 DOI: 10.1016/j.jbi.2020.103378   
2020 Wen WX, Mead AJ, Thongjuea S. Technological advances and computational approaches for alternative splicing analysis in single cells. Computational and Structural Biotechnology Journal. 18: 332-343. PMID 32099593 DOI: 10.1016/j.csbj.2020.01.009   
2020 Li D, Cai L, Meng R, Feng Z, Xu Q. METTL3 Modulates Osteoclast Differentiation and Function by Controlling RNA Stability and Nuclear Export. International Journal of Molecular Sciences. 21. PMID 32121289 DOI: 10.3390/ijms21051660   
2020 Hansen M, Zeddies S, Meinders M, di Summa F, van Alphen FPJ, Hoogendijk AJ, Moore KS, Halbach M, Gutiérrez L, van den Biggelaar M, Thijssen-Timmer DC, Auburger GWJ, van den Akker E, von Lindern M, Rollmann E. The RNA-Binding Protein ATXN2 is Expressed during Megakaryopoiesis and May Control Timing of Gene Expression. International Journal of Molecular Sciences. 21. PMID 32024018 DOI: 10.3390/ijms21030967   
2020 Mathison A, Milech De Assuncao T, Dsouza NR, Williams M, Zimmermann MT, Urrutia R, Lomberk G. Discovery, expression, cellular localization, and molecular properties of a novel, alternative spliced HP1γ isoform, lacking the chromoshadow domain. Plos One. 15: e0217452. PMID 32027651 DOI: 10.1371/journal.pone.0217452   
2020 Biever A, Glock C, Tushev G, Ciirdaeva E, Dalmay T, Langer JD, Schuman EM. Monosomes actively translate synaptic mRNAs in neuronal processes. Science (New York, N.Y.). 367. PMID 32001627 DOI: 10.1126/science.aay4991   
2020 Islam S, Sabharwal T, Wu S, Bullock TJ, Mehdy MC. Early dynamics of photosynthetic Lhcf2 and Lhcf15 transcription and mRNA stabilities in response to herbivory-related decadienal in Phaeodactylum tricornutum. Scientific Reports. 10: 2029. PMID 32029835 DOI: 10.1038/s41598-020-58885-9   
2020 Gosavi U, Srivastava A, Badjatia N, Günzl A. Rapid block of pre-mRNA splicing by chemical inhibition of analog-sensitive CRK9 in Trypanosoma brucei. Molecular Microbiology. PMID 32068297 DOI: 10.1111/mmi.14489   
2020 Metz PJ, Ching KA, Xie T, Delgado Cuenca P, Niessen S, Tatlock JH, Jensen-Pergakes K, Murray BW. Symmetric Arginine Dimethylation Is Selectively Required for mRNA Splicing and the Initiation of Type I and Type III Interferon Signaling. Cell Reports. 30: 1935-1950.e8. PMID 32049022 DOI: 10.1016/j.celrep.2020.01.054   
2020 Li Y, Liu X, Guo Y, Xie J, Wang L, Chen Q, Wang G, Wang Z, Gao H. Secondary mutation-induced alternative splicing suppresses RNA splicing defect of the jing he sheng1 mutant. Plant Physiology. PMID 32054782 DOI: 10.1104/pp.19.01571   
2020 Roach NP, Sadowski N, Alessi AF, Timp W, Taylor J, Kim JK. The full-length transcriptome of using direct RNA sequencing. Genome Research. PMID 32024661 DOI: 10.1101/gr.251314.119   
2020 Wu H, Zhou J, Zhu T, Cohen I, Dictenberg J. A Kinesin adapter directly mediates dendritic mRNA localization during neural development in mice. The Journal of Biological Chemistry. PMID 32111743 DOI: 10.1074/jbc.RA118.005616   
2020 Parr CJC, Wada S, Kotake K, Kameda S, Matsuura S, Sakashita S, Park S, Sugiyama H, Kuang Y, Saito H. N 1-Methylpseudouridine substitution enhances the performance of synthetic mRNA switches in cells. Nucleic Acids Research. PMID 32090264 DOI: 10.1093/nar/gkaa070   
2020 Jia J, Wang W, Kuang D, Lu C, Li N, Tong P, Han Y, Sun X, Dai J. mRNA Profiling Reveals Response Regulators of Decreased Fungal Keratitis Symptoms in a Tree Shrew Model. Gene. 144450. PMID 32057930 DOI: 10.1016/j.gene.2020.144450   
2020 Masek T, Del Llano E, Gahurova L, Kubelka M, Susor A, Roucova K, Lin CJ, Bruce AW, Pospisek M. Identifying the Translatome of Mouse NEBD-Stage Oocytes via SSP-Profiling; A Novel Polysome Fractionation Method. International Journal of Molecular Sciences. 21. PMID 32070012 DOI: 10.3390/ijms21041254   
2020 Del Valle Morales D, Trotman JB, Bundschuh R, Schoenberg DR. Inhibition of cytoplasmic cap methylation identifies 5' TOP mRNAs as recapping targets and reveals recapping sites downstream of native 5' ends. Nucleic Acids Research. PMID 31996904 DOI: 10.1093/nar/gkaa046   
2020 Feng J, Xu H, Pan F, Hu J, Wu Y, Lin N, Zhang X, Ji C, Hu Y, Zhong H, Yan L, Zhong T, Cui X. An Integrated Analysis of mRNA and lncRNA Expression Profiles Indicates Their Potential Contribution to Brown Fat Dysfunction With Aging. Frontiers in Endocrinology. 11: 46. PMID 32127793 DOI: 10.3389/fendo.2020.00046   
2020 Forrest ME, Pinkard O, Martin S, Sweet TJ, Hanson G, Coller J. Codon and amino acid content are associated with mRNA stability in mammalian cells. Plos One. 15: e0228730. PMID 32053646 DOI: 10.1371/journal.pone.0228730   
2020 Zhang Y, Dai Y, Huang Y, Wang K, Lu P, Xu H, Xu JR, Liu H. The SR-protein FgSrp2 regulates vegetative growth, sexual reproduction and pre-mRNA processing by interacting with FgSrp1 in Fusarium graminearum. Current Genetics. PMID 32040734 DOI: 10.1007/s00294-020-01054-2   
2020 Ozawa S, Cavaiuolo M, Jarrige D, Kuras R, Rutgers M, Eberhard S, Drapier D, Wollman FA, Choquet Y. The OPR Protein MTHI1 Controls the Expression of Two Different Subunits of ATP Synthase CFo in Chlamydomonas reinhardtii. The Plant Cell. PMID 31988263 DOI: 10.1105/tpc.19.00770   
2020 Cho SY, Lee S, Yeom J, Kim HJ, Lee JH, Shin JW, Kwon MA, Lee KB, Jeong EM, Ahn HS, Shin DM, Kim K, Kim IG. Transglutaminase 2 mediates hypoxia-induced selective mRNA translation via polyamination of 4EBPs. Life Science Alliance. 3. PMID 32075852 DOI: 10.26508/lsa.201900565   
2020 Wang B, Shi L, Men J, Li Q, Hou X, Wang C, Zhao F. Controlled synchronization of prolactin/STAT5 and AKT1/mTOR in bovine mammary epithelial cells. In Vitro Cellular & Developmental Biology. Animal. PMID 32078727 DOI: 10.1007/s11626-020-00432-x   
2020 Di H, Elbahesh H, Brinton MA. Characteristics of Human OAS1 Isoform Proteins. Viruses. 12. PMID 32013110 DOI: 10.3390/v12020152   
2020 Jiang Y, Cai NN, Zhao XX, Zhu WQ, Zhang J, Yang R, Tang B, Li ZY, Zhang XM. Decreased abundance of GDNF mRNA transcript in the immature Sertoli cells of cattle in response to protein kinase inhibitor staurosporine. Animal Reproduction Science. 214: 106303. PMID 32087919 DOI: 10.1016/j.anireprosci.2020.106303   
2020 Uno Y, Uehara S, Tanaka S, Murayama N, Yamazaki H. Systematic characterization of glutathione S-transferases in common marmosets. Biochemical Pharmacology. 113835. PMID 32027883 DOI: 10.1016/j.bcp.2020.113835   
2020 Sun J, Li B, Shu C, Ma Q, Wang J. Functions and clinical significance of circular RNAs in glioma. Molecular Cancer. 19: 34. PMID 32061256 DOI: 10.1186/s12943-019-1121-0   
2020 Wei A, Wang R, Wei K, Dai C, Huang Y, Xu P, Xu J, Tang H, Zhang Y, Fan Y. LncRNA and mRNA Expression Profiling in the Periurethral Vaginal Wall Tissues of Postmenopausal Women with Stress Urinary Incontinence. Reproductive Sciences (Thousand Oaks, Calif.). PMID 32046467 DOI: 10.1007/s43032-020-00144-3   
2020 Wang J, Meng Z, Wang G, Fu Q, Zhang M. A CCL25 chemokine functions as a chemoattractant and an immunomodulator in black rockfish, Sebastes schlegelii. Fish & Shellfish Immunology. PMID 32135342 DOI: 10.1016/j.fsi.2020.02.063   
2020 Hsiao WY, Wang YT, Wang SW. Fission yeast Puf2, a Pumilio and FBF family of RNA-binding protein, links stress granules to processing bodies. Molecular and Cellular Biology. PMID 32071154 DOI: 10.1128/MCB.00589-19   
2020 Thomas DS, Varma M, Manoharan C, Rao GP, Vijayan K, Mishra RK, Gopalapillai R, Sinha DK. Molecular characterization and functional analysis of the vitellogenin receptor from eri silkworm, Samia ricini. Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology. 110417. PMID 32058017 DOI: 10.1016/j.cbpb.2020.110417   
2020 Zhang L, Cao L, Yang F, Han X, Wang Y, Cao N, Yang L. Relative abundance of interferon-stimulated genes STAT1, OAS1, CXCL10 and MX1 in ovine lymph nodes during early pregnancy. Animal Reproduction Science. 214: 106285. PMID 32087912 DOI: 10.1016/j.anireprosci.2020.106285   
2020 Haneke K, Schott J, Lindner D, Hollensen AK, Damgaard CK, Mongis C, Knop M, Palm W, Ruggieri A, Stoecklin G. CDK1 couples proliferation with protein synthesis. The Journal of Cell Biology. 219. PMID 32040547 DOI: 10.1083/jcb.201906147   
2020 Poletti A, Fischbeck KH. Combinatorial treatment for spinal muscular atrophy: An Editorial for 'Combined treatment with the histone deacetylase inhibitor LBH589 and a splice-switch antisense oligonucleotide enhances SMN2 splicing and SMN expression in Spinal Muscular Atrophy cells' on doi: 10.1111/jnc.14935. Journal of Neurochemistry. PMID 32056234 DOI: 10.1111/jnc.14974   
2020 Kim NY, Lee S, Yu J, Kim N, Won SS, Park H, Heo WD. Optogenetic control of mRNA localization and translation in live cells. Nature Cell Biology. PMID 32066905 DOI: 10.1038/s41556-020-0468-1   
2020 Wadhwa A, Aljabbari A, Lokras A, Foged C, Thakur A. Opportunities and Challenges in the Delivery of mRNA-based Vaccines. Pharmaceutics. 12. PMID 32013049 DOI: 10.3390/pharmaceutics12020102   
2020 Skarratt KK, Gu BJ, Lovelace MD, Milligan CJ, Stokes L, Glover R, Petrou S, Wiley JS, Fuller SJ. A P2RX7 single nucleotide polymorphism haplotype promotes exon 7 and 8 skipping and disrupts receptor function. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 32003498 DOI: 10.1096/fj.201901198RR   
2020 Salvy P, Hatzimanikatis V. The ETFL formulation allows multi-omics integration in thermodynamics-compliant metabolism and expression models. Nature Communications. 11: 30. PMID 31937763 DOI: 10.1038/s41467-019-13818-7   
2020 Zhang J, Wei J, Wang Z, Feng Y, Wei Z, Hou X, Xu J, He Y, Yang D. Transcriptome hallmarks in infection influence gastric cancer and MALT lymphoma. Epigenomics. PMID 32129675 DOI: 10.2217/epi-2019-0152   
2020 Meulemans L, Mesman RLS, Caputo SM, Krieger S, Guillaud-Bataille M, Caux-Moncoutier V, Léone M, Boutry-Kryza N, Sokolowska J, Révillion F, Delnatte C, Tubeuf H, Soukarieh O, Bonnet-Dorion F, Guibert V, et al. Skipping nonsense to maintain function: the paradigm of BRCA2 exon 12. Cancer Research. PMID 32046981 DOI: 10.1158/0008-5472.CAN-19-2491   
2020 Zhan J, Irudayam MJ, Nakamura Y, Kurita R, Nienhuis AW. High level of fetal-globin reactivation by designed transcriptional activator-like effector. Blood Advances. 4: 687-695. PMID 32084259 DOI: 10.1182/bloodadvances.2019000482