| Year |
Citation |
Score |
| 2022 |
Snyder MP, Gingeras TR, Moore JE, Weng Z, Gerstein MB, Ren B, Hardison RC, Stamatoyannopoulos JA, Graveley BR, Feingold EA, Pazin MJ, Pagan M, Gilchrist DA, Hitz BC, Cherry JM, ... ... Myers RM, et al. Author Correction: Perspectives on ENCODE. Nature. PMID 35474002 DOI: 10.1038/s41586-021-04213-8 |
0.667 |
|
| 2022 |
Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, Shen Y, ... ... Myers RM, et al. Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature. PMID 35474001 DOI: 10.1038/s41586-021-04226-3 |
0.774 |
|
| 2021 |
Rogers BB, Lauzon SN, Davis MN, Rizzardi LF, Cooper SJ, Myers RM, Cochran JN. Identification of cis-regulatory elements associated with MAPT expression in human induced pluripotent stem cell derived neural cells. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. 17: e058349. PMID 34971147 DOI: 10.1002/alz.058349 |
0.68 |
|
| 2021 |
Ross EJ, Gordon ER, Sothers H, Darji R, Baron O, Haithcock D, Prabhakarpandian B, Pant K, Myers RM, Cooper SJ, Cox NJ. Three dimensional modeling of biologically relevant fluid shear stress in human renal tubule cells mimics in vivo transcriptional profiles. Scientific Reports. 11: 14053. PMID 34234242 DOI: 10.1038/s41598-021-93570-5 |
0.654 |
|
| 2021 |
Ramaker RC, Hardigan AA, Gordon ER, Wright CA, Myers RM, Cooper SJ. Pooled CRISPR screening in pancreatic cancer cells implicates co-repressor complexes as a cause of multiple drug resistance via regulation of epithelial-to-mesenchymal transition. Bmc Cancer. 21: 632. PMID 34049503 DOI: 10.1186/s12885-021-08388-1 |
0.766 |
|
| 2021 |
Jia X, Goes FS, Locke AE, Palmer D, Wang W, Cohen-Woods S, Genovese G, Jackson AU, Jiang C, Kvale M, Mullins N, Nguyen H, Pirooznia M, Rivera M, Ruderfer DM, ... ... Myers RM, et al. Correction: Investigating rare pathogenic/likely pathogenic exonic variation in bipolar disorder. Molecular Psychiatry. PMID 33674754 DOI: 10.1038/s41380-021-01063-8 |
0.455 |
|
| 2021 |
Jia X, Goes FS, Locke AE, Palmer D, Wang W, Cohen-Woods S, Genovese G, Jackson AU, Jiang C, Kvale M, Mullins N, Nguyen H, Pirooznia M, Rivera M, Ruderfer DM, ... ... Myers RM, et al. Investigating rare pathogenic/likely pathogenic exonic variation in bipolar disorder. Molecular Psychiatry. PMID 33483695 DOI: 10.1038/s41380-020-01006-9 |
0.53 |
|
| 2021 |
Voskobiynyk Y, Battu G, Felker SA, Cochran JN, Newton MP, Lambert LJ, Kesterson RA, Myers RM, Cooper GM, Roberson ED, Barsh GS. Aberrant regulation of a poison exon caused by a non-coding variant in a mouse model of Scn1a-associated epileptic encephalopathy. Plos Genetics. 17: e1009195. PMID 33411788 DOI: 10.1371/journal.pgen.1009195 |
0.505 |
|
| 2020 |
Conway ME, McDaniel JM, Graham JM, Guillen KP, Oliver PG, Parker SL, Yue P, Turkson J, Buchsbaum DJ, Welm BE, Myers RM, Varley KE. STAT3 and GR cooperate to drive gene expression and growth of basal-like triple-negative breast cancer. Cancer Research. PMID 32816914 DOI: 10.1158/0008-5472.Can-20-1379 |
0.373 |
|
| 2020 |
Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, ... ... Myers RM, et al. Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature. 583: 699-710. PMID 32728249 DOI: 10.1038/S41586-020-2493-4 |
0.808 |
|
| 2020 |
Snyder MP, Gingeras TR, Moore JE, Weng Z, Gerstein MB, Ren B, Hardison RC, Stamatoyannopoulos JA, Graveley BR, Feingold EA, Pazin MJ, Pagan M, Gilchrist DA, Hitz BC, ... ... Myers RM, et al. Perspectives on ENCODE. Nature. 583: 693-698. PMID 32728248 DOI: 10.1038/S41586-020-2449-8 |
0.761 |
|
| 2020 |
Partridge EC, Chhetri SB, Prokop JW, Ramaker RC, Jansen CS, Goh ST, Mackiewicz M, Newberry KM, Brandsmeier LA, Meadows SK, Messer CL, Hardigan AA, Coppola CJ, Dean EC, Jiang S, ... ... Myers RM, et al. Occupancy maps of 208 chromatin-associated proteins in one human cell type. Nature. 583: 720-728. PMID 32728244 DOI: 10.1038/S41586-020-2023-4 |
0.816 |
|
| 2020 |
Ramaker RC, Hardigan AA, Goh ST, Partridge EC, Wold B, Cooper SJ, Myers RM. Dissecting the regulatory activity and sequence content of loci with exceptional numbers of transcription factor associations. Genome Research. PMID 32616518 DOI: 10.1101/Gr.260463.119 |
0.815 |
|
| 2020 |
Cochran JN, Geier EG, Bonham LW, Newberry JS, Amaral MD, Thompson ML, Lasseigne BN, Karydas AM, Roberson ED, Cooper GM, Rabinovici GD, Miller BL, Myers RM, Yokoyama JS. Non-Coding and Loss-of-Function Coding Variants in TET2 are Associated with Multiple Neurodegenerative Diseases. American Journal of Human Genetics. PMID 32330418 DOI: 10.1016/J.Ajhg.2020.03.010 |
0.782 |
|
| 2020 |
Meadows SK, Brandsmeier LA, Newberry KM, Betti MJ, Nesmith AS, Mackiewicz M, Partridge EC, Mendenhall EM, Myers RM. Epitope Tagging ChIP-Seq of DNA Binding Proteins Using CETCh-Seq. Methods in Molecular Biology (Clifton, N.J.). 2117: 3-34. PMID 31960370 DOI: 10.1007/978-1-0716-0301-7_1 |
0.361 |
|
| 2019 |
Cochran JN, McKinley EC, Cochran M, Amaral MD, Moyers BA, Lasseigne BN, Gray DE, Lawlor JMJ, Prokop JW, Geier EG, Holt JM, Thompson ML, Newberry JS, Yokoyama JS, Worthey EA, ... ... Myers RM, et al. Genome sequencing for early-onset or atypical dementia: high diagnostic yield and frequent observation of multiple contributory alleles. Cold Spring Harbor Molecular Case Studies. 5. PMID 31836585 DOI: 10.1101/mcs.a003491 |
0.787 |
|
| 2019 |
Pham D, Moseley CE, Gao M, Savic D, Winstead CJ, Sun M, Kee BL, Myers RM, Weaver CT, Hatton RD. Batf Pioneers the Reorganization of Chromatin in Developing Effector T Cells via Ets1-Dependent Recruitment of Ctcf. Cell Reports. 29: 1203-1220.e7. PMID 31665634 DOI: 10.1016/J.Celrep.2019.09.064 |
0.323 |
|
| 2019 |
He L, Cohen EB, Edwards APB, Xavier-Ferrucio J, Bugge K, Federman RS, Absher D, Myers RM, Kragelund BB, Krause DS, DiMaio D. Transmembrane Protein Aptamer Induces Cooperative Signaling by the EPO Receptor and the Cytokine Receptor β-Common Subunit. Iscience. 17: 167-181. PMID 31279934 DOI: 10.1016/J.Isci.2019.06.027 |
0.557 |
|
| 2019 |
Hardigan AA, Roberts BS, Moore DE, Ramaker RC, Jones AL, Myers RM. CRISPR/Cas9-targeted removal of unwanted sequences from small-RNA sequencing libraries. Nucleic Acids Research. PMID 31165880 DOI: 10.1093/Nar/Gkz425 |
0.78 |
|
| 2019 |
Stahl EA, Breen G, Forstner AJ, McQuillin A, Ripke S, Trubetskoy V, Mattheisen M, Wang Y, Coleman JRI, Gaspar HA, de Leeuw CA, Steinberg S, Pavlides JMW, Trzaskowski M, Byrne EM, ... ... Myers RM, et al. Genome-wide association study identifies 30 loci associated with bipolar disorder. Nature Genetics. PMID 31043756 DOI: 10.1038/S41588-019-0397-8 |
0.571 |
|
| 2019 |
Gelfman S, Dugger SA, Araujo Martins Moreno C, Ren Z, Wolock CJ, Shneider N, Phatnani H, Cirulli ET, Lasseigne BN, Harris T, Maniatis T, Rouleau G, Brown RH, Gitler AD, Myers RM, et al. A new approach for rare variation collapsing on functional protein domains implicates specific genic regions in ALS. Genome Research. PMID 30940688 DOI: 10.1101/Gr.243592.118 |
0.78 |
|
| 2019 |
Hjelm BE, Rollins B, Morgan L, Sequeira A, Mamdani F, Pereira F, Damas J, Webb MG, Weber MD, Schatzberg AF, Barchas JD, Lee FS, Akil H, Watson SJ, Myers RM, et al. Splice-Break: exploiting an RNA-seq splice junction algorithm to discover mitochondrial DNA deletion breakpoints and analyses of psychiatric disorders. Nucleic Acids Research. PMID 30869147 DOI: 10.1093/Nar/Gkz164 |
0.316 |
|
| 2019 |
Ramaker RC, Hardigan AA, Gordon ER, Myers RM, Cooper SJ. Abstract 5135: Genome-wide CRISPR-based screening reveals ABCG2 as a novel drug resistance gene in pancreatic cancer Cancer Research. DOI: 10.1158/1538-7445.Sabcs18-5135 |
0.783 |
|
| 2019 |
Cochran ME, Cochran JN, McKinley E, Amaral MD, Moyer B, Lasseigne BN, Gray D, Lawlor JM, Prokop J, Newberry JS, Worthey EA, Geldmacher DS, Natelson Love MC, Myers RM, Roberson ED. P3-143: UTILITY OF GENOMIC SEQUENCING IN CASES OF EARLY-ONSET AND FAMILIAL DEMENTIA Alzheimer's & Dementia. 15: P986-P986. DOI: 10.1016/J.Jalz.2019.06.3171 |
0.775 |
|
| 2019 |
Cochran JN, Geier EG, Acosta-Uribe J, Thompson ML, Amaral MD, Newberry JS, Lawlor JMJ, Lasseigne BN, Cochran ME, Bonham LW, Karydas AM, Roberson ED, Lopera F, Kosik KS, Cooper GM, ... ... Myers RM, et al. P2-126: Loss-Of-Function Coding And Non-Coding Variants In Tet2 Are Associated With Neurodegenerative Diseases Alzheimers & Dementia. 15. DOI: 10.1016/J.Jalz.2019.06.2533 |
0.763 |
|
| 2018 |
Carvill GL, Engel KL, Ramamurthy A, Cochran JN, Roovers J, Stamberger H, Lim N, Schneider AL, Hollingsworth G, Holder DH, Regan BM, Lawlor J, Lagae L, Ceulemans B, Bebin EM, ... ... Myers RM, et al. Aberrant Inclusion of a Poison Exon Causes Dravet Syndrome and Related SCN1A-Associated Genetic Epilepsies. American Journal of Human Genetics. 103: 1022-1029. PMID 30526861 DOI: 10.1016/J.Ajhg.2018.10.023 |
0.369 |
|
| 2018 |
Hiatt SM, Neu MB, Ramaker RC, Hardigan AA, Prokop JW, Hancarova M, Prchalova D, Havlovicova M, Prchal J, Stranecky V, Yim DKC, Powis Z, Keren B, Nava C, Mignot C, ... ... Myers RM, et al. De novo mutations in the GTP/GDP-binding region of RALA, a RAS-like small GTPase, cause intellectual disability and developmental delay. Plos Genetics. 14: e1007671. PMID 30500825 DOI: 10.1371/Journal.Pgen.1007671 |
0.783 |
|
| 2018 |
Koch H, Starenki D, Cooper SJ, Myers RM, Li Q. powerTCR: A model-based approach to comparative analysis of the clone size distribution of the T cell receptor repertoire. Plos Computational Biology. 14: e1006571. PMID 30485278 DOI: 10.1371/Journal.Pcbi.1006571 |
0.622 |
|
| 2018 |
Geier EG, Bourdenx M, Storm NJ, Cochran JN, Sirkis DW, Hwang JH, Bonham LW, Ramos EM, Diaz A, Van Berlo V, Dokuru D, Nana AL, Karydas A, Balestra ME, Huang Y, ... ... Myers RM, et al. Rare variants in the neuronal ceroid lipofuscinosis gene MFSD8 are candidate risk factors for frontotemporal dementia. Acta Neuropathologica. PMID 30382371 DOI: 10.1007/S00401-018-1925-9 |
0.333 |
|
| 2018 |
Carlson J, Locke AE, Flickinger M, Zawistowski M, Levy S, Myers RM, Boehnke M, Kang HM, Scott LJ, Li JZ, Zöllner S. Extremely rare variants reveal patterns of germline mutation rate heterogeneity in humans. Nature Communications. 9: 3753. PMID 30218074 DOI: 10.1038/S41467-018-05936-5 |
0.39 |
|
| 2018 |
Hagenauer MH, Schulmann A, Li JZ, Vawter MP, Walsh DM, Thompson RC, Turner CA, Bunney WE, Myers RM, Barchas JD, Schatzberg AF, Watson SJ, Akil H. Inference of cell type content from human brain transcriptomic datasets illuminates the effects of age, manner of death, dissection, and psychiatric diagnosis. Plos One. 13: e0200003. PMID 30016334 DOI: 10.1371/Journal.Pone.0200003 |
0.385 |
|
| 2018 |
Hiatt SM, Amaral MD, Bowling KM, Finnila CR, Thompson ML, Gray DE, Lawlor JMJ, Cochran JN, Bebin EM, Brothers KB, East KM, Kelley WV, Lamb NE, Levy SE, Lose EJ, ... ... Myers RM, et al. Systematic reanalysis of genomic data improves quality of variant interpretation. Clinical Genetics. PMID 29652076 DOI: 10.1111/Cge.13259 |
0.31 |
|
| 2018 |
Venkataraman A, Yang K, Irizarry J, Mackiewicz M, Mita P, Kuang Z, Xue L, Ghosh D, Liu S, Ramos P, Hu S, Bayron Kain D, Keegan S, Saul R, Colantonio S, ... ... Myers RM, et al. A toolbox of immunoprecipitation-grade monoclonal antibodies to human transcription factors. Nature Methods. PMID 29638227 DOI: 10.1038/Nmeth.4632 |
0.316 |
|
| 2018 |
Nicolas A, Kenna KP, Renton AE, Ticozzi N, Faghri F, Chia R, Dominov JA, Kenna BJ, Nalls MA, Keagle P, Rivera AM, van Rheenen W, Murphy NA, van Vugt JJFA, Geiger JT, ... ... Myers RM, et al. Genome-wide Analyses Identify KIF5A as a Novel ALS Gene. Neuron. 97: 1268-1283.e6. PMID 29566793 DOI: 10.1016/J.Neuron.2018.02.027 |
0.694 |
|
| 2018 |
Myers RM, Kimberly RP, Roberts BS, Hardigan AA, Moore DE, Jones AL, Fitz-Gerald MB, Cooper GM, Wilcox CM, Ramaker RC. Discovery and validation of circulating biomarkers of colorectal adenoma by high-depth small RNA sequencing. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 29490987 DOI: 10.1158/1078-0432.Ccr-17-1960 |
0.772 |
|
| 2017 |
Ramaker RC, Savic D, Hardigan AA, Newberry K, Cooper GM, Myers RM, Cooper SJ. A genome-wide interactome of DNA-associated proteins in the human liver. Genome Research. PMID 29021291 DOI: 10.1101/Gr.222083.117 |
0.804 |
|
| 2017 |
Chisolm DA, Savic D, Moore AJ, Ballesteros-Tato A, León B, Crossman DK, Murre C, Myers RM, Weinmann AS. CCCTC-Binding Factor Translates Interleukin 2- and α-Ketoglutarate-Sensitive Metabolic Changes in T Cells into Context-Dependent Gene Programs. Immunity. 47: 251-267.e7. PMID 28813658 DOI: 10.1016/J.Immuni.2017.07.015 |
0.331 |
|
| 2017 |
Ramaker RC, Bowling KM, Lasseigne BN, Hagenauer MH, Hardigan AA, Davis NS, Gertz J, Cartagena PM, Walsh DM, Vawter MP, Jones EG, Schatzberg AF, Barchas JD, Watson SJ, Bunney BG, ... ... Myers RM, et al. Post-mortem molecular profiling of three psychiatric disorders. Genome Medicine. 9: 72. PMID 28754123 DOI: 10.1186/S13073-017-0458-5 |
0.751 |
|
| 2017 |
Witt SH, Streit F, Jungkunz M, Frank J, Awasthi S, Reinbold CS, Treutlein J, Degenhardt F, Forstner AJ, Heilmann-Heimbach S, Dietl L, Schwarze CE, Schendel D, Strohmaier J, Abdellaoui A, ... ... Myers RM, et al. Genome-wide association study of borderline personality disorder reveals genetic overlap with bipolar disorder, major depression and schizophrenia. Translational Psychiatry. 7: e1155. PMID 28632202 DOI: 10.1038/Tp.2017.115 |
0.323 |
|
| 2017 |
Ramaker RC, Lasseigne BN, Hardigan AA, Palacio L, Gunther DS, Myers RM, Cooper SJ. RNA sequencing-based cell proliferation analysis across 19 cancers identifies a subset of proliferation-informative cancers with a common survival signature. Oncotarget. PMID 28454104 DOI: 10.18632/Oncotarget.16961 |
0.778 |
|
| 2017 |
Kirby MK, Ramaker RC, Roberts BS, Lasseigne BN, Gunther DS, Burwell TC, Davis NS, Gulzar ZG, Absher DM, Cooper SJ, Brooks JD, Myers RM. Genome-wide DNA methylation measurements in prostate tissues uncovers novel prostate cancer diagnostic biomarkers and transcription factor binding patterns. Bmc Cancer. 17: 273. PMID 28412973 DOI: 10.1186/S12885-017-3252-2 |
0.764 |
|
| 2017 |
Alonso A, Lasseigne BN, Williams K, Nielsen J, Ramaker RC, Hardigan AA, Johnston B, Roberts BS, Cooper SJ, Marsal S, Myers RM. aRNApipe: A balanced, efficient and distributed pipeline for processing RNA-seq data in high performance computing environments. Bioinformatics (Oxford, England). PMID 28108448 DOI: 10.1093/Bioinformatics/Btx023 |
0.764 |
|
| 2017 |
Gragg SD, Absher D, Cui X, Pillion C, Myers R, Kumar S, Costa L, Chiu B, Vachon C, Brown E. Abstract 1319: Epigenome-wide association study reveals differential DNA methylation consistent with progression of multiple myeloma Cancer Research. 77: 1319-1319. DOI: 10.1158/1538-7445.Am2017-1319 |
0.319 |
|
| 2017 |
Julià A, Carreira P, Blanco R, Lόpez-Longo F, Pérez-Venegas J, Olivé A, Andreu J, Aguirre-Zamorano M, Vela P, Nolla J, Fuente JMdl, Zea A, Pego J, Freire M, Díez E, ... ... Myers R, et al. THU0227 Genome-wide association meta-analysis identifies five new loci for systemic lupus erythematosus Annals of the Rheumatic Diseases. 76: 290-290. DOI: 10.1136/Annrheumdis-2017-Eular.2854 |
0.322 |
|
| 2017 |
Julià A, Absher D, Lόpez-Lasanta M, Palau N, Pluma A, Jones LW, Glossop J, Farrell W, Myers R, Marsal S. SAT0022 Epigenome-wide association study of rheumatoid arthritis identifies differentially methylated loci in b cells Annals of the Rheumatic Diseases. 76: 776-776. DOI: 10.1136/Annrheumdis-2017-Eular.2338 |
0.304 |
|
| 2016 |
McDaniel JM, Varley KE, Gertz J, Savic DS, Roberts BS, Bailey SK, Shevde LA, Ramaker RC, Lasseigne BN, Kirby MK, Newberry KM, Partridge EC, Jones AL, Boone B, Levy SE, ... ... Myers RM, et al. Genomic regulation of invasion by STAT3 in triple negative breast cancer. Oncotarget. PMID 28030809 DOI: 10.18632/Oncotarget.14153 |
0.77 |
|
| 2016 |
Ghatalia P, Yang ES, Lasseigne BN, Ramaker RC, Cooper SJ, Chen D, Sudarshan S, Wei S, Guru AS, Zhao A, Cooper T, Della Manna DL, Naik G, Myers RM, Sonpavde G. Kinase Gene Expression Profiling of Metastatic Clear Cell Renal Cell Carcinoma Tissue Identifies Potential New Therapeutic Targets. Plos One. 11: e0160924. PMID 27574806 DOI: 10.1371/Journal.Pone.0160924 |
0.771 |
|
| 2016 |
McCarthy S, Das S, Kretzschmar W, Delaneau O, Wood AR, Teumer A, Kang HM, Fuchsberger C, Danecek P, Sharp K, Luo Y, Sidore C, Kwong A, Timpson N, Koskinen S, ... ... Myers RM, et al. A reference panel of 64,976 haplotypes for genotype imputation. Nature Genetics. PMID 27548312 DOI: 10.1038/Ng.3643 |
0.304 |
|
| 2016 |
Kim JH, Shinde DN, Reijnders MR, Hauser NS, Belmonte RL, Wilson GR, Bosch DG, Bubulya PA, Shashi V, Petrovski S, Stone JK, Park EY, Veltman JA, Sinnema M, Stumpel CT, ... ... Myers RM, et al. De Novo Mutations in SON Disrupt RNA Splicing of Genes Essential for Brain Development and Metabolism, Causing an Intellectual-Disability Syndrome. American Journal of Human Genetics. PMID 27545680 DOI: 10.1016/J.Ajhg.2016.06.029 |
0.323 |
|
| 2016 |
Savic D, Ramaker RC, Roberts BS, Dean EC, Burwell TC, Meadows SK, Cooper SJ, Garabedian MJ, Gertz J, Myers RM. Distinct gene regulatory programs define the inhibitory effects of liver X receptors and PPARG on cancer cell proliferation. Genome Medicine. 8: 74. PMID 27401066 DOI: 10.1186/S13073-016-0328-6 |
0.78 |
|
| 2016 |
Green RC, Goddard KA, Jarvik GP, Amendola LM, Appelbaum PS, Berg JS, Bernhardt BA, Biesecker LG, Biswas S, Blout CL, Bowling KM, Brothers KB, Burke W, Caga-Anan CF, Chinnaiyan AM, ... ... Myers RM, et al. Clinical Sequencing Exploratory Research Consortium: Accelerating Evidence-Based Practice of Genomic Medicine. American Journal of Human Genetics. 99: 246. PMID 27392080 DOI: 10.1016/J.Ajhg.2016.06.002 |
0.639 |
|
| 2016 |
Levy SE, Myers RM. Advancements in Next-Generation Sequencing. Annual Review of Genomics and Human Genetics. PMID 27362342 DOI: 10.1146/Annurev-Genom-083115-022413 |
0.328 |
|
| 2016 |
Kirby MK, Ramaker RC, Gertz J, Davis NS, Johnston BE, Oliver PG, Sexton KC, Greeno EW, Christein JD, Heslin MJ, Posey JA, Grizzle WE, Vickers SM, Buchsbaum DJ, Cooper SJ, ... Myers RM, et al. RNA sequencing of pancreatic adenocarcinoma tumors yields novel expression patterns associated with long-term survival and reveals a role for ANGPTL4. Molecular Oncology. PMID 27282075 DOI: 10.1016/J.Molonc.2016.05.004 |
0.768 |
|
| 2016 |
Engel KL, Mackiewicz M, Hardigan AA, Myers RM, Savic D. Decoding transcriptional enhancers: Evolving from annotation to functional interpretation. Seminars in Cell & Developmental Biology. PMID 27224938 DOI: 10.1016/J.Semcdb.2016.05.014 |
0.401 |
|
| 2016 |
Green RC, Goddard KA, Jarvik GP, Amendola LM, Appelbaum PS, Berg JS, Bernhardt BA, Biesecker LG, Biswas S, Blout CL, Bowling KM, Brothers KB, Burke W, Caga-Anan CF, Chinnaiyan AM, ... ... Myers RM, et al. Clinical Sequencing Exploratory Research Consortium: Accelerating Evidence-Based Practice of Genomic Medicine. American Journal of Human Genetics. PMID 27181682 DOI: 10.1016/J.Ajhg.2016.04.011 |
0.662 |
|
| 2016 |
Morgan LZ, Rollins B, Sequeira A, Byerley W, DeLisi LE, Schatzberg AF, Barchas JD, Myers RM, Watson SJ, Akil H, Bunney WE, Vawter MP. Quantitative Trait Locus and Brain Expression of HLA-DPA1 Offers Evidence of Shared Immune Alterations in Psychiatric Disorders. Microarrays (Basel, Switzerland). 5. PMID 26998349 DOI: 10.3390/Microarrays5010006 |
0.301 |
|
| 2016 |
Kim JH, Baddoo MC, Park EY, Stone JK, Park H, Butler TW, Huang G, Yan X, Pauli-Behn F, Myers RM, Tan M, Flemington EK, Lim ST, Ahn EE. SON and Its Alternatively Spliced Isoforms Control MLL Complex-Mediated H3K4me3 and Transcription of Leukemia-Associated Genes. Molecular Cell. 61: 859-873. PMID 26990989 DOI: 10.1016/J.Molcel.2016.02.024 |
0.358 |
|
| 2016 |
Julià A, González I, Fernández-Nebro A, Blanco F, Rodriguez L, González A, Cañete JD, Maymó J, Alperi-López M, Olivé A, Corominas H, Martínez-Taboada V, Erra A, Sánchez-Fernández S, Alonso A, ... ... Myers RM, et al. A genome-wide association study identifies SLC8A3 as a susceptibility locus for ACPA-positive rheumatoid arthritis. Rheumatology (Oxford, England). PMID 26983453 DOI: 10.1093/Rheumatology/Kew035 |
0.304 |
|
| 2016 |
Indjeian VB, Kingman GA, Jones FC, Guenther CA, Grimwood J, Schmutz J, Myers RM, Kingsley DM. Evolving New Skeletal Traits by cis-Regulatory Changes in Bone Morphogenetic Proteins. Cell. 164: 45-56. PMID 26774823 DOI: 10.1016/J.Cell.2015.12.007 |
0.317 |
|
| 2015 |
Huang W, Thomas B, Flynn RA, Gavzy SJ, Wu L, Kim SV, Hall JA, Miraldi ER, Ng CP, Rigo FW, Meadows S, Montoya NR, Herrera NG, Domingos AI, Rastinejad F, ... Myers RM, et al. DDX5 and its associated lncRNA Rmrp modulate TH17 cell effector functions. Nature. PMID 26675721 DOI: 10.1038/Nature16193 |
0.349 |
|
| 2015 |
Savic D, Roberts BS, Carleton JB, Partridge EC, White MA, Cohen BA, Cooper GM, Gertz J, Myers RM. Promoter-distal RNA polymerase II binding discriminates active from inactive CCAAT/enhancer-binding protein beta binding sites. Genome Research. PMID 26486725 DOI: 10.1101/Gr.191593.115 |
0.401 |
|
| 2015 |
Savic D, Partridge EC, Newberry KM, Smith SB, Meadows SK, Roberts BS, Mackiewicz M, Mendenhall EM, Myers RM. CETCh-seq: CRISPR epitope tagging ChIP-seq of DNA-binding proteins. Genome Research. 25: 1581-9. PMID 26355004 DOI: 10.1101/Gr.193540.115 |
0.375 |
|
| 2015 |
Aurbach EL, Inui EG, Turner CA, Hagenauer MH, Prater KE, Li JZ, Absher D, Shah N, Blandino P, Bunney WE, Myers RM, Barchas JD, Schatzberg AF, Watson SJ, Akil H. Fibroblast growth factor 9 is a novel modulator of negative affect. Proceedings of the National Academy of Sciences of the United States of America. 112: 11953-8. PMID 26351673 DOI: 10.1073/Pnas.1510456112 |
0.33 |
|
| 2015 |
Sequeira A, Rollins B, Magnan C, van Oven M, Baldi P, Myers RM, Barchas JD, Schatzberg AF, Watson SJ, Akil H, Bunney WE, Vawter MP. Mitochondrial mutations in subjects with psychiatric disorders. Plos One. 10: e0127280. PMID 26011537 DOI: 10.1371/Journal.Pone.0127280 |
0.31 |
|
| 2015 |
Cirulli ET, Lasseigne BN, Petrovski S, Sapp PC, Dion PA, Leblond CS, Couthouis J, Lu YF, Wang Q, Krueger BJ, Ren Z, Keebler J, Han Y, Levy SE, Boone BE, ... ... Myers RM, et al. Exome sequencing in amyotrophic lateral sclerosis identifies risk genes and pathways. Science (New York, N.Y.). 347: 1436-41. PMID 25700176 DOI: 10.1126/Science.Aaa3650 |
0.784 |
|
| 2015 |
Forero-Torres A, Varley KE, Li Y, Chen D, Grizzle WE, Downs-Kelly E, Burwell TC, Buchsbaum DJ, Myers RM, LoBuglio AF. MHC II antigen presentation pathway expression in triple-negative breast cancer. Journal of Clinical Oncology. 33: 1066-1066. DOI: 10.1200/Jco.2015.33.15_Suppl.1066 |
0.333 |
|
| 2014 |
Lasseigne BN, Burwell TC, Patil MA, Absher DM, Brooks JD, Myers RM. DNA methylation profiling reveals novel diagnostic biomarkers in renal cell carcinoma. Bmc Medicine. 12: 235. PMID 25472429 DOI: 10.1186/S12916-014-0235-X |
0.767 |
|
| 2014 |
Vrieze SI, Malone SM, Vaidyanathan U, Kwong A, Kang HM, Zhan X, Flickinger M, Irons D, Jun G, Locke AE, Pistis G, Porcu E, Levy S, Myers RM, Oetting W, et al. In search of rare variants: preliminary results from whole genome sequencing of 1,325 individuals with psychophysiological endophenotypes. Psychophysiology. 51: 1309-20. PMID 25387710 DOI: 10.1111/Psyp.12350 |
0.34 |
|
| 2014 |
Kellis M, Wold B, Snyder MP, Bernstein BE, Kundaje A, Marinov GK, Ward LD, Birney E, Crawford GE, Dekker J, Dunham I, Elnitski LL, Farnham PJ, Feingold EA, Gerstein M, ... ... Myers RM, et al. Reply to Brunet and Doolittle: Both selected effect and causal role elements can influence human biology and disease. Proceedings of the National Academy of Sciences of the United States of America. 111: E3366. PMID 25275169 DOI: 10.1073/Pnas.1410434111 |
0.634 |
|
| 2014 |
Julià A, Domènech E, Chaparro M, García-Sánchez V, Gomollón F, Panés J, Mañosa M, Barreiro-De Acosta M, Gutiérrez A, Garcia-Planella E, Aguas M, Muñoz F, Esteve M, Mendoza JL, Vera M, ... ... Myers RM, et al. A genome-wide association study identifies a novel locus at 6q22.1 associated with ulcerative colitis. Human Molecular Genetics. 23: 6927-34. PMID 25082827 DOI: 10.1093/Hmg/Ddu398 |
0.323 |
|
| 2014 |
Varley KE, Gertz J, Roberts BS, Davis NS, Bowling KM, Kirby MK, Nesmith AS, Oliver PG, Grizzle WE, Forero A, Buchsbaum DJ, LoBuglio AF, Myers RM. Recurrent read-through fusion transcripts in breast cancer. Breast Cancer Research and Treatment. 146: 287-97. PMID 24929677 DOI: 10.1007/S10549-014-3019-2 |
0.319 |
|
| 2014 |
Gasper WC, Marinov GK, Pauli-Behn F, Scott MT, Newberry K, DeSalvo G, Ou S, Myers RM, Vielmetter J, Wold BJ. Fully automated high-throughput chromatin immunoprecipitation for ChIP-seq: identifying ChIP-quality p300 monoclonal antibodies. Scientific Reports. 4: 5152. PMID 24919486 DOI: 10.1038/Srep05152 |
0.352 |
|
| 2014 |
Turner CA, Thompson RC, Bunney WE, Schatzberg AF, Barchas JD, Myers RM, Akil H, Watson SJ. Altered choroid plexus gene expression in major depressive disorder. Frontiers in Human Neuroscience. 8: 238. PMID 24795602 DOI: 10.3389/Fnhum.2014.00238 |
0.316 |
|
| 2014 |
Kellis M, Wold B, Snyder MP, Bernstein BE, Kundaje A, Marinov GK, Ward LD, Birney E, Crawford GE, Dekker J, Dunham I, Elnitski LL, Farnham PJ, Feingold EA, Gerstein M, ... ... Myers RM, et al. Defining functional DNA elements in the human genome. Proceedings of the National Academy of Sciences of the United States of America. 111: 6131-8. PMID 24753594 DOI: 10.1073/Pnas.1318948111 |
0.684 |
|
| 2014 |
Marinov GK, Williams BA, McCue K, Schroth GP, Gertz J, Myers RM, Wold BJ. From single-cell to cell-pool transcriptomes: stochasticity in gene expression and RNA splicing. Genome Research. 24: 496-510. PMID 24299736 DOI: 10.1101/Gr.161034.113 |
0.343 |
|
| 2014 |
Domènech E, Juliá A, Chaparro M, García-Sánchez V, Gomollón F, Panés J, Mañosa M, Barreiro-de Acosta M, Gutiérrez A, García-Planella E, Nos P, Muñoz F, Esteve M, Mendoza J, Vera M, ... ... Myers R, et al. P665 A genome-wide association study identifies DSE-FAM26F as a risk locus for ulcerative colitis Journal of Crohn's and Colitis. 8: S348. DOI: 10.1016/S1873-9946(14)60784-4 |
0.308 |
|
| 2014 |
Gisbert JP, Julià A, Chaparro M, García-Sánchez V, Gomollon F, Panes J, Mañosa M, Barreiro-de Acosta M, Gutiérrez A, García-Planella E, Nos P, Muñoz F, Esteve M, Mendoza JL, Vera I, ... ... Myers R, et al. Tu1943a A Genome-Wide Association Study Identifies DSE-FAM26F As a Risk Locus for Ulcerative Colitis Gastroenterology. 146: S-878. DOI: 10.1016/S0016-5085(14)63198-X |
0.31 |
|
| 2013 |
Tomita H, Ziegler ME, Kim HB, Evans SJ, Choudary PV, Li JZ, Meng F, Dai M, Myers RM, Neal CR, Speed TP, Barchas JD, Schatzberg AF, Watson SJ, Akil H, et al. G protein-linked signaling pathways in bipolar and major depressive disorders. Frontiers in Genetics. 4: 297. PMID 24391664 DOI: 10.3389/Fgene.2013.00297 |
0.349 |
|
| 2013 |
Savic D, Gertz J, Jain P, Cooper GM, Myers RM. Mapping genome-wide transcription factor binding sites in frozen tissues. Epigenetics & Chromatin. 6: 30. PMID 24279905 DOI: 10.1186/1756-8935-6-30 |
0.367 |
|
| 2013 |
Mortazavi A, Pepke S, Jansen C, Marinov GK, Ernst J, Kellis M, Hardison RC, Myers RM, Wold BJ. Integrating and mining the chromatin landscape of cell-type specificity using self-organizing maps. Genome Research. 23: 2136-48. PMID 24170599 DOI: 10.1101/Gr.158261.113 |
0.564 |
|
| 2013 |
Gertz J, Savic D, Varley KE, Partridge EC, Safi A, Jain P, Cooper GM, Reddy TE, Crawford GE, Myers RM. Distinct properties of cell-type-specific and shared transcription factor binding sites. Molecular Cell. 52: 25-36. PMID 24076218 DOI: 10.1016/J.Molcel.2013.08.037 |
0.357 |
|
| 2013 |
Chiu IM, Morimoto ET, Goodarzi H, Liao JT, O'Keeffe S, Phatnani HP, Muratet M, Carroll MC, Levy S, Tavazoie S, Myers RM, Maniatis T. A neurodegeneration-specific gene-expression signature of acutely isolated microglia from an amyotrophic lateral sclerosis mouse model. Cell Reports. 4: 385-401. PMID 23850290 DOI: 10.1016/J.Celrep.2013.06.018 |
0.783 |
|
| 2013 |
Li JZ, Bunney BG, Meng F, Hagenauer MH, Walsh DM, Vawter MP, Evans SJ, Choudary PV, Cartagena P, Barchas JD, Schatzberg AF, Jones EG, Myers RM, Watson SJ, Akil H, et al. Circadian patterns of gene expression in the human brain and disruption in major depressive disorder. Proceedings of the National Academy of Sciences of the United States of America. 110: 9950-5. PMID 23671070 DOI: 10.1073/Pnas.1305814110 |
0.373 |
|
| 2013 |
Tsumagari K, Baribault C, Terragni J, Varley KE, Gertz J, Pradhan S, Badoo M, Crain CM, Song L, Crawford GE, Myers RM, Lacey M, Ehrlich M. Early de novo DNA methylation and prolonged demethylation in the muscle lineage. Epigenetics : Official Journal of the Dna Methylation Society. 8: 317-32. PMID 23417056 DOI: 10.4161/Epi.23989 |
0.316 |
|
| 2013 |
Phatnani HP, Guarnieri P, Friedman BA, Carrasco MA, Muratet M, O'Keeffe S, Nwakeze C, Pauli-Behn F, Newberry KM, Meadows SK, Tapia JC, Myers RM, Maniatis T. Intricate interplay between astrocytes and motor neurons in ALS. Proceedings of the National Academy of Sciences of the United States of America. 110: E756-65. PMID 23388633 DOI: 10.1073/Pnas.1222361110 |
0.732 |
|
| 2013 |
Varley KE, Gertz J, Bowling KM, Parker SL, Reddy TE, Pauli-Behn F, Cross MK, Williams BA, Stamatoyannopoulos JA, Crawford GE, Absher DM, Wold BJ, Myers RM. Dynamic DNA methylation across diverse human cell lines and tissues. Genome Research. 23: 555-67. PMID 23325432 DOI: 10.1101/Gr.147942.112 |
0.363 |
|
| 2012 |
Guo Y, Monahan K, Wu H, Gertz J, Varley KE, Li W, Myers RM, Maniatis T, Wu Q. CTCF/cohesin-mediated DNA looping is required for protocadherin α promoter choice. Proceedings of the National Academy of Sciences of the United States of America. 109: 21081-6. PMID 23204437 DOI: 10.1073/Pnas.1219280110 |
0.794 |
|
| 2012 |
Candille SI, Absher DM, Beleza S, Bauchet M, McEvoy B, Garrison NA, Li JZ, Myers RM, Barsh GS, Tang H, Shriver MD. Genome-wide association studies of quantitatively measured skin, hair, and eye pigmentation in four European populations. Plos One. 7: e48294. PMID 23118974 DOI: 10.1371/Journal.Pone.0048294 |
0.325 |
|
| 2012 |
Kerman IA, Bernard R, Bunney WE, Jones EG, Schatzberg AF, Myers RM, Barchas JD, Akil H, Watson SJ, Thompson RC. Evidence for transcriptional factor dysregulation in the dorsal raphe nucleus of patients with major depressive disorder. Frontiers in Neuroscience. 6: 135. PMID 23087602 DOI: 10.3389/Fnins.2012.00135 |
0.355 |
|
| 2012 |
Hastak K, Adimoolam S, Trinklein ND, Myers RM, Ford JM. Identification of a Functional In Vivo p53 Response Element in the Coding Sequence of the Xeroderma Pigmentosum Group C Gene. Genes & Cancer. 3: 131-40. PMID 23050045 DOI: 10.1177/1947601912456288 |
0.714 |
|
| 2012 |
Ciofani M, Madar A, Galan C, Sellars M, Mace K, Pauli F, Agarwal A, Huang W, Parkurst CN, Muratet M, Newberry KM, Meadows S, Greenfield A, Yang Y, Jain P, ... ... Myers RM, et al. A validated regulatory network for Th17 cell specification. Cell. 151: 289-303. PMID 23021777 DOI: 10.1016/J.Cell.2012.09.016 |
0.332 |
|
| 2012 |
Gertz J, Reddy TE, Varley KE, Garabedian MJ, Myers RM. Genistein and bisphenol A exposure cause estrogen receptor 1 to bind thousands of sites in a cell type-specific manner. Genome Research. 22: 2153-62. PMID 23019147 DOI: 10.1101/Gr.135681.111 |
0.369 |
|
| 2012 |
Landt SG, Marinov GK, Kundaje A, Kheradpour P, Pauli F, Batzoglou S, Bernstein BE, Bickel P, Brown JB, Cayting P, Chen Y, DeSalvo G, Epstein C, Fisher-Aylor KI, Euskirchen G, ... ... Myers RM, et al. ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia. Genome Research. 22: 1813-31. PMID 22955991 DOI: 10.1101/Gr.136184.111 |
0.327 |
|
| 2012 |
Wang J, Zhuang J, Iyer S, Lin X, Whitfield TW, Greven MC, Pierce BG, Dong X, Kundaje A, Cheng Y, Rando OJ, Birney E, Myers RM, Noble WS, Snyder M, et al. Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors. Genome Research. 22: 1798-812. PMID 22955990 DOI: 10.1101/Gr.139105.112 |
0.393 |
|
| 2012 |
Wang H, Maurano MT, Qu H, Varley KE, Gertz J, Pauli F, Lee K, Canfield T, Weaver M, Sandstrom R, Thurman RE, Kaul R, Myers RM, Stamatoyannopoulos JA. Widespread plasticity in CTCF occupancy linked to DNA methylation. Genome Research. 22: 1680-8. PMID 22955980 DOI: 10.1101/Gr.136101.111 |
0.404 |
|
| 2012 |
Gerstein MB, Kundaje A, Hariharan M, Landt SG, Yan KK, Cheng C, Mu XJ, Khurana E, Rozowsky J, Alexander R, Min R, Alves P, Abyzov A, Addleman N, Bhardwaj N, ... ... Myers RM, et al. Architecture of the human regulatory network derived from ENCODE data. Nature. 489: 91-100. PMID 22955619 DOI: 10.1038/Nature11245 |
0.545 |
|
| 2012 |
Sumiyama K, Miyake T, Grimwood J, Stuart A, Dickson M, Schmutz J, Ruddle FH, Myers RM, Amemiya CT. Theria-specific homeodomain and cis-regulatory element evolution of the Dlx3-4 bigene cluster in 12 different mammalian species. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 318: 639-50. PMID 22951979 DOI: 10.1002/Jez.B.22469 |
0.343 |
|
| 2012 |
Whitfield TW, Wang J, Collins PJ, Partridge EC, Aldred SF, Trinklein ND, Myers RM, Weng Z. Functional analysis of transcription factor binding sites in human promoters. Genome Biology. 13: R50. PMID 22951020 DOI: 10.1186/Gb-2012-13-9-R50 |
0.685 |
|
| 2012 |
Pemberton TJ, Absher D, Feldman MW, Myers RM, Rosenberg NA, Li JZ. Genomic patterns of homozygosity in worldwide human populations. American Journal of Human Genetics. 91: 275-92. PMID 22883143 DOI: 10.1016/J.Ajhg.2012.06.014 |
0.397 |
|
| 2012 |
Reddy TE, Gertz J, Crawford GE, Garabedian MJ, Myers RM. The hypersensitive glucocorticoid response specifically regulates period 1 and expression of circadian genes. Molecular and Cellular Biology. 32: 3756-67. PMID 22801371 DOI: 10.1128/Mcb.00062-12 |
0.392 |
|
| 2012 |
Sequeira A, Morgan L, Walsh DM, Cartagena PM, Choudary P, Li J, Schatzberg AF, Watson SJ, Akil H, Myers RM, Jones EG, Bunney WE, Vawter MP. Gene expression changes in the prefrontal cortex, anterior cingulate cortex and nucleus accumbens of mood disorders subjects that committed suicide. Plos One. 7: e35367. PMID 22558144 DOI: 10.1371/Journal.Pone.0035367 |
0.332 |
|
| 2012 |
Monahan K, Rudnick ND, Kehayova PD, Pauli F, Newberry KM, Myers RM, Maniatis T. Role of CCCTC binding factor (CTCF) and cohesin in the generation of single-cell diversity of protocadherin-α gene expression. Proceedings of the National Academy of Sciences of the United States of America. 109: 9125-30. PMID 22550178 DOI: 10.1073/Pnas.1205074109 |
0.797 |
|
| 2012 |
Chen Y, Negre N, Li Q, Mieczkowska JO, Slattery M, Liu T, Zhang Y, Kim TK, He HH, Zieba J, Ruan Y, Bickel PJ, Myers RM, Wold BJ, White KP, et al. Systematic evaluation of factors influencing ChIP-seq fidelity. Nature Methods. 9: 609-14. PMID 22522655 DOI: 10.1038/Nmeth.1985 |
0.351 |
|
| 2012 |
Jones FC, Grabherr MG, Chan YF, Russell P, Mauceli E, Johnson J, Swofford R, Pirun M, Zody MC, White S, Birney E, Searle S, Schmutz J, Grimwood J, Dickson MC, ... Myers RM, et al. The genomic basis of adaptive evolution in threespine sticklebacks. Nature. 484: 55-61. PMID 22481358 DOI: 10.1038/Nature10944 |
0.34 |
|
| 2012 |
Reddy TE, Gertz J, Pauli F, Kucera KS, Varley KE, Newberry KM, Marinov GK, Mortazavi A, Williams BA, Song L, Crawford GE, Wold B, Willard HF, Myers RM. Effects of sequence variation on differential allelic transcription factor occupancy and gene expression. Genome Research. 22: 860-9. PMID 22300769 DOI: 10.1101/Gr.131201.111 |
0.424 |
|
| 2012 |
Jones FC, Chan YF, Schmutz J, Grimwood J, Brady SD, Southwick AM, Absher DM, Myers RM, Reimchen TE, Deagle BE, Schluter D, Kingsley DM. A genome-wide SNP genotyping array reveals patterns of global and repeated species-pair divergence in sticklebacks. Current Biology : Cb. 22: 83-90. PMID 22197244 DOI: 10.1016/J.Cub.2011.11.045 |
0.315 |
|
| 2012 |
Zimmerman JW, Pennison MJ, Brezovich I, Yi N, Yang CT, Ramaker R, Absher D, Myers RM, Kuster N, Costa FP, Barbault A, Pasche B. Cancer cell proliferation is inhibited by specific modulation frequencies. British Journal of Cancer. 106: 307-13. PMID 22134506 DOI: 10.1038/Bjc.2011.523 |
0.766 |
|
| 2012 |
Gertz J, Varley KE, Davis NS, Baas BJ, Goryshin IY, Vaidyanathan R, Kuersten S, Myers RM. Transposase mediated construction of RNA-seq libraries. Genome Research. 22: 134-41. PMID 22128135 DOI: 10.1101/Gr.127373.111 |
0.302 |
|
| 2012 |
Simpson NE, Gertz J, Imberg K, Myers RM, Garabedian MJ. Research resource: enhanced genome-wide occupancy of estrogen receptor α by the cochaperone p23 in breast cancer cells. Molecular Endocrinology (Baltimore, Md.). 26: 194-202. PMID 22074947 DOI: 10.1210/Me.2011-1068 |
0.349 |
|
| 2012 |
Spayd KJ, Vasenkova I, Shvetsova T, Bachmeyer RC, Myers RM, Moore DT, Varley KE. Abstract LB-412: TargetRich cancer gene panels: targeted next generation sequencing in cancer samples Cancer Research. 72. DOI: 10.1158/1538-7445.Am2012-Lb-412 |
0.383 |
|
| 2012 |
Zimmerman JW, Pennison MJ, Brezovich I, Yi N, Yang CT, Ramaker R, Absher D, Myers RM, Kuster N, Costa FP, Barbault A, Pasche B. Abstract 916A: Cancer cell proliferation is inhibited by specific modulation frequencies Cancer Research. 72: 5612-5612. DOI: 10.1158/1538-7445.Am2012-916A |
0.775 |
|
| 2011 |
Ng SL, Friedman BA, Schmid S, Gertz J, Myers RM, Tenoever BR, Maniatis T. IκB kinase epsilon (IKK(epsilon)) regulates the balance between type I and type II interferon responses. Proceedings of the National Academy of Sciences of the United States of America. 108: 21170-5. PMID 22171011 DOI: 10.1073/Pnas.1119137109 |
0.667 |
|
| 2011 |
Gertz J, Varley KE, Reddy TE, Bowling KM, Pauli F, Parker SL, Kucera KS, Willard HF, Myers RM. Analysis of DNA methylation in a three-generation family reveals widespread genetic influence on epigenetic regulation. Plos Genetics. 7: e1002228. PMID 21852959 DOI: 10.1371/Journal.Pgen.1002228 |
0.354 |
|
| 2011 |
Kucera KS, Reddy TE, Pauli F, Gertz J, Logan JE, Myers RM, Willard HF. Allele-specific distribution of RNA polymerase II on female X chromosomes. Human Molecular Genetics. 20: 3964-73. PMID 21791549 DOI: 10.1093/Hmg/Ddr315 |
0.344 |
|
| 2011 |
Kobayashi Y, Absher DM, Gulzar ZG, Young SR, McKenney JK, Peehl DM, Brooks JD, Myers RM, Sherlock G. DNA methylation profiling reveals novel biomarkers and important roles for DNA methyltransferases in prostate cancer. Genome Research. 21: 1017-27. PMID 21521786 DOI: 10.1101/Gr.119487.110 |
0.317 |
|
| 2011 |
Mendoza-Fandino GA, Gee JM, Ben-Dor S, Gonzalez-Quevedo C, Lee K, Kobayashi Y, Hartiala J, Myers RM, Leal SM, Allayee H, Patel PI. A novel g.-1258G>A mutation in a conserved putative regulatory element of PAX9 is associated with autosomal dominant molar hypodontia. Clinical Genetics. 80: 265-72. PMID 21443745 DOI: 10.1111/J.1399-0004.2010.01529.X |
0.33 |
|
| 2011 |
Bernard R, Kerman IA, Thompson RC, Jones EG, Bunney WE, Barchas JD, Schatzberg AF, Myers RM, Akil H, Watson SJ. Altered expression of glutamate signaling, growth factor, and glia genes in the locus coeruleus of patients with major depression. Molecular Psychiatry. 16: 634-46. PMID 20386568 DOI: 10.1038/Mp.2010.44 |
0.308 |
|
| 2010 |
Landolin JM, Johnson DS, Trinklein ND, Aldred SF, Medina C, Shulha H, Weng Z, Myers RM. Sequence features that drive human promoter function and tissue specificity. Genome Research. 20: 890-8. PMID 20501695 DOI: 10.1101/Gr.100370.109 |
0.715 |
|
| 2010 |
Ding F, Li HH, Li J, Myers RM, Francke U. Neonatal maternal deprivation response and developmental changes in gene expression revealed by hypothalamic gene expression profiling in mice. Plos One. 5: e9402. PMID 20195375 DOI: 10.1371/Journal.Pone.0009402 |
0.346 |
|
| 2010 |
Amemiya CT, Powers TP, Prohaska SJ, Grimwood J, Schmutz J, Dickson M, Miyake T, Schoenborn MA, Myers RM, Ruddle FH, Stadler PF. Complete HOX cluster characterization of the coelacanth provides further evidence for slow evolution of its genome. Proceedings of the National Academy of Sciences of the United States of America. 107: 3622-7. PMID 20139301 DOI: 10.1073/Pnas.0914312107 |
0.353 |
|
| 2010 |
Casto AM, Li JZ, Absher D, Myers R, Ramachandran S, Feldman MW. Characterization of X-linked SNP genotypic variation in globally distributed human populations. Genome Biology. 11: R10. PMID 20109212 DOI: 10.1186/Gb-2010-11-1-R10 |
0.339 |
|
| 2010 |
Goode DL, Cooper GM, Schmutz J, Dickson M, Gonzales E, Tsai M, Karra K, Davydov E, Batzoglou S, Myers RM, Sidow A. Evolutionary constraint facilitates interpretation of genetic variation in resequenced human genomes. Genome Research. 20: 301-10. PMID 20067941 DOI: 10.1101/Gr.102210.109 |
0.361 |
|
| 2009 |
Lamb NE, Myers RM, Gunter C. Education and personalized genomics: deciphering the public's genetic health report. Personalized Medicine. 6: 681. PMID 20161675 DOI: 10.2217/Pme.09.57 |
0.3 |
|
| 2009 |
Wheeler HE, Metter EJ, Tanaka T, Absher D, Higgins J, Zahn JM, Wilhelmy J, Davis RW, Singleton A, Myers RM, Ferrucci L, Kim SK. Sequential use of transcriptional profiling, expression quantitative trait mapping, and gene association implicates MMP20 in human kidney aging. Plos Genetics. 5: e1000685. PMID 19834535 DOI: 10.1371/Journal.Pgen.1000685 |
0.309 |
|
| 2009 |
Reddy TE, Pauli F, Sprouse RO, Neff NF, Newberry KM, Garabedian MJ, Myers RM. Genomic determination of the glucocorticoid response reveals unexpected mechanisms of gene regulation. Genome Research. 19: 2163-71. PMID 19801529 DOI: 10.1101/Gr.097022.109 |
0.406 |
|
| 2009 |
Temple G, Gerhard DS, Rasooly R, Feingold EA, Good PJ, Robinson C, Mandich A, Derge JG, Lewis J, Shoaf D, Collins FS, Jang W, Wagner L, Shenmen CM, ... ... Myers RM, et al. The completion of the Mammalian Gene Collection (MGC). Genome Research. 19: 2324-33. PMID 19767417 DOI: 10.1101/Gr.095976.109 |
0.387 |
|
| 2009 |
Hesselson SE, Matsson P, Shima JE, Fukushima H, Yee SW, Kobayashi Y, Gow JM, Ha C, Ma B, Poon A, Johns SJ, Stryke D, Castro RA, Tahara H, Choi JH, ... ... Myers R, et al. Genetic variation in the proximal promoter of ABC and SLC superfamilies: liver and kidney specific expression and promoter activity predict variation. Plos One. 4: e6942. PMID 19742321 DOI: 10.1371/Journal.Pone.0006942 |
0.329 |
|
| 2009 |
Pasche B, Myers RM. One step forward toward identification of the genetic signature of glioblastomas. Jama. 302: 325-6. PMID 19602695 DOI: 10.1001/Jama.2009.1023 |
0.325 |
|
| 2009 |
Coop G, Pickrell JK, Novembre J, Kudaravalli S, Li J, Absher D, Myers RM, Cavalli-Sforza LL, Feldman MW, Pritchard JK. The role of geography in human adaptation. Plos Genetics. 5: e1000500. PMID 19503611 DOI: 10.1371/Journal.Pgen.1000500 |
0.381 |
|
| 2009 |
Scott LJ, Muglia P, Kong XQ, Guan W, Flickinger M, Upmanyu R, Tozzi F, Li JZ, Burmeister M, Absher D, Thompson RC, Francks C, Meng F, Antoniades A, Southwick AM, ... ... Myers RM, et al. Genome-wide association and meta-analysis of bipolar disorder in individuals of European ancestry. Proceedings of the National Academy of Sciences of the United States of America. 106: 7501-6. PMID 19416921 DOI: 10.1073/Pnas.0813386106 |
0.505 |
|
| 2009 |
Pickrell JK, Coop G, Novembre J, Kudaravalli S, Li JZ, Absher D, Srinivasan BS, Barsh GS, Myers RM, Feldman MW, Pritchard JK. Signals of recent positive selection in a worldwide sample of human populations. Genome Research. 19: 826-37. PMID 19307593 DOI: 10.1101/Gr.087577.108 |
0.361 |
|
| 2009 |
Brunner AL, Johnson DS, Kim SW, Valouev A, Reddy TE, Neff NF, Anton E, Medina C, Nguyen L, Chiao E, Oyolu CB, Schroth GP, Absher DM, Baker JC, Myers RM. Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver. Genome Research. 19: 1044-56. PMID 19273619 DOI: 10.1101/Gr.088773.108 |
0.779 |
|
| 2009 |
Itsara A, Cooper GM, Baker C, Girirajan S, Li J, Absher D, Krauss RM, Myers RM, Ridker PM, Chasman DI, Mefford H, Ying P, Nickerson DA, Eichler EE. Population analysis of large copy number variants and hotspots of human genetic disease. American Journal of Human Genetics. 84: 148-61. PMID 19166990 DOI: 10.1016/J.Ajhg.2008.12.014 |
0.363 |
|
| 2008 |
Valouev A, Johnson DS, Sundquist A, Medina C, Anton E, Batzoglou S, Myers RM, Sidow A. Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data. Nature Methods. 5: 829-34. PMID 19160518 DOI: 10.1038/Nmeth.1246 |
0.402 |
|
| 2008 |
Ji H, Jiang H, Ma W, Johnson DS, Myers RM, Wong WH. An integrated software system for analyzing ChIP-chip and ChIP-seq data. Nature Biotechnology. 26: 1293-300. PMID 18978777 DOI: 10.1038/Nbt.1505 |
0.343 |
|
| 2008 |
Zhang Y, Liu T, Meyer CA, Eeckhoute J, Johnson DS, Bernstein BE, Nusbaum C, Myers RM, Brown M, Li W, Liu XS. Model-based analysis of ChIP-Seq (MACS). Genome Biology. 9: R137. PMID 18798982 DOI: 10.1186/Gb-2008-9-9-R137 |
0.321 |
|
| 2008 |
McGowan KA, Li JZ, Park CY, Beaudry V, Tabor HK, Sabnis AJ, Zhang W, Fuchs H, de Angelis MH, Myers RM, Attardi LD, Barsh GS. Ribosomal mutations cause p53-mediated dark skin and pleiotropic effects. Nature Genetics. 40: 963-70. PMID 18641651 DOI: 10.1038/Ng.188 |
0.659 |
|
| 2008 |
Assimes TL, Knowles JW, Basu A, Iribarren C, Southwick A, Tang H, Absher D, Li J, Fair JM, Rubin GD, Sidney S, Fortmann SP, Go AS, Hlatky MA, Myers RM, et al. Susceptibility locus for clinical and subclinical coronary artery disease at chromosome 9p21 in the multi-ethnic ADVANCE study. Human Molecular Genetics. 17: 2320-8. PMID 18443000 DOI: 10.1093/Hmg/Ddn132 |
0.308 |
|
| 2008 |
Knowles JW, Assimes TL, Boerwinkle E, Fortmann SP, Go A, Grove ML, Hlatky M, Iribarren C, Li J, Myers R, Risch N, Sidney S, Southwick A, Volcik KA, Quertermous T. Failure to replicate an association of SNPs in the oxidized LDL receptor gene (OLR1) with CAD. Bmc Medical Genetics. 9: 23. PMID 18384690 DOI: 10.1186/1471-2350-9-23 |
0.321 |
|
| 2008 |
Assimes TL, Knowles JW, Priest JR, Basu A, Volcik KA, Southwick A, Tabor HK, Hartiala J, Allayee H, Grove ML, Tabibiazar R, Sidney S, Fortmann SP, Go A, Hlatky M, ... ... Myers R, et al. Common polymorphisms of ALOX5 and ALOX5AP and risk of coronary artery disease. Human Genetics. 123: 399-408. PMID 18369664 DOI: 10.1007/S00439-008-0489-5 |
0.626 |
|
| 2008 |
Schroeder DI, Myers RM. Multiple transcription start sites for FOXP2 with varying cellular specificities. Gene. 413: 42-8. PMID 18316164 DOI: 10.1016/J.Gene.2008.01.015 |
0.759 |
|
| 2008 |
Li JZ, Absher DM, Tang H, Southwick AM, Casto AM, Ramachandran S, Cann HM, Barsh GS, Feldman M, Cavalli-Sforza LL, Myers RM. Worldwide human relationships inferred from genome-wide patterns of variation. Science (New York, N.Y.). 319: 1100-4. PMID 18292342 DOI: 10.1126/Science.1153717 |
0.363 |
|
| 2008 |
Johnson DS, Li W, Gordon DB, Bhattacharjee A, Curry B, Ghosh J, Brizuela L, Carroll JS, Brown M, Flicek P, Koch CM, Dunham I, Bieda M, Xu X, Farnham PJ, ... ... Myers RM, et al. Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets. Genome Research. 18: 393-403. PMID 18258921 DOI: 10.1101/Gr.7080508 |
0.731 |
|
| 2008 |
Assimes TL, Knowles JW, Priest JR, Basu A, Borchert A, Volcik KA, Grove ML, Tabor HK, Southwick A, Tabibiazar R, Sidney S, Boerwinkle E, Go AS, Iribarren C, Hlatky MA, ... ... Myers RM, et al. A near null variant of 12/15-LOX encoded by a novel SNP in ALOX15 and the risk of coronary artery disease. Atherosclerosis. 198: 136-44. PMID 17959182 DOI: 10.1016/J.Atherosclerosis.2007.09.003 |
0.63 |
|
| 2007 |
Wold B, Myers RM. Sequence census methods for functional genomics. Nature Methods. 5: 19-21. PMID 18165803 DOI: 10.1038/Nmeth1157 |
0.336 |
|
| 2007 |
Hlatky MA, Quertermous T, Boothroyd DB, Priest JR, Glassford AJ, Myers RM, Fortmann SP, Iribarren C, Tabor HK, Assimes TL, Tibshirani RJ, Go AS. Polymorphisms in hypoxia inducible factor 1 and the initial clinical presentation of coronary disease. American Heart Journal. 154: 1035-42. PMID 18035072 DOI: 10.1016/J.Ahj.2007.07.042 |
0.623 |
|
| 2007 |
Collins PJ, Kobayashi Y, Nguyen L, Trinklein ND, Myers RM. The ets-related transcription factor GABP directs bidirectional transcription. Plos Genetics. 3: e208. PMID 18020712 DOI: 10.1371/Journal.Pgen.0030208 |
0.718 |
|
| 2007 |
Li JZ, Meng F, Tsavaler L, Evans SJ, Choudary PV, Tomita H, Vawter MP, Walsh D, Shokoohi V, Chung T, Bunney WE, Jones EG, Akil H, Watson SJ, Myers RM. Sample matching by inferred agonal stress in gene expression analyses of the brain. Bmc Genomics. 8: 336. PMID 17892578 DOI: 10.1186/1471-2164-8-336 |
0.344 |
|
| 2007 |
Birney E, Stamatoyannopoulos JA, Dutta A, Guigó R, Gingeras TR, Margulies EH, Weng Z, Snyder M, Dermitzakis ET, Thurman RE, Kuehn MS, Taylor CM, Neph S, Koch CM, ... ... Myers RM, et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature. 447: 799-816. PMID 17571346 DOI: 10.1038/Nature05874 |
0.812 |
|
| 2007 |
Lin JM, Collins PJ, Trinklein ND, Fu Y, Xi H, Myers RM, Weng Z. Transcription factor binding and modified histones in human bidirectional promoters. Genome Research. 17: 818-27. PMID 17568000 DOI: 10.1101/Gr.5623407 |
0.734 |
|
| 2007 |
Denoeud F, Kapranov P, Ucla C, Frankish A, Castelo R, Drenkow J, Lagarde J, Alioto T, Manzano C, Chrast J, Dike S, Wyss C, Henrichsen CN, Holroyd N, Dickson MC, ... ... Myers RM, et al. Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions. Genome Research. 17: 746-59. PMID 17567994 DOI: 10.1101/Gr.5660607 |
0.446 |
|
| 2007 |
Trinklein ND, Karaöz U, Wu J, Halees A, Force Aldred S, Collins PJ, Zheng D, Zhang ZD, Gerstein MB, Snyder M, Myers RM, Weng Z. Integrated analysis of experimental data sets reveals many novel promoters in 1% of the human genome. Genome Research. 17: 720-31. PMID 17567992 DOI: 10.1101/Gr.5716607 |
0.807 |
|
| 2007 |
Johnson DS, Mortazavi A, Myers RM, Wold B. Genome-wide mapping of in vivo protein-DNA interactions. Science (New York, N.Y.). 316: 1497-502. PMID 17540862 DOI: 10.1126/Science.1141319 |
0.403 |
|
| 2007 |
Cooper SJ, Trinklein ND, Nguyen L, Myers RM. Serum response factor binding sites differ in three human cell types. Genome Research. 17: 136-44. PMID 17200232 DOI: 10.1101/Gr.5875007 |
0.787 |
|
| 2007 |
Strehlow AN, Li JZ, Myers RM. Wild-type huntingtin participates in protein trafficking between the Golgi and the extracellular space. Human Molecular Genetics. 16: 391-409. PMID 17189290 DOI: 10.1093/Hmg/Ddl467 |
0.784 |
|
| 2006 |
Mortazavi A, Leeper Thompson EC, Garcia ST, Myers RM, Wold B. Comparative genomics modeling of the NRSF/REST repressor network: from single conserved sites to genome-wide repertoire. Genome Research. 16: 1208-21. PMID 16963704 DOI: 10.1101/Gr.4997306 |
0.395 |
|
| 2006 |
Morin RD, Chang E, Petrescu A, Liao N, Griffith M, Chow W, Kirkpatrick R, Butterfield YS, Young AC, Stott J, Barber S, Babakaiff R, Dickson MC, Matsuo C, Wong D, ... ... Myers RM, et al. Sequencing and analysis of 10,967 full-length cDNA clones from Xenopus laevis and Xenopus tropicalis reveals post-tetraploidization transcriptome remodeling. Genome Research. 16: 796-803. PMID 16672307 DOI: 10.1101/Gr.4871006 |
0.332 |
|
| 2006 |
Vawter MP, Tomita H, Meng F, Bolstad B, Li J, Evans S, Choudary P, Atz M, Shao L, Neal C, Walsh DM, Burmeister M, Speed T, Myers R, Jones EG, et al. Mitochondrial-related gene expression changes are sensitive to agonal-pH state: implications for brain disorders. Molecular Psychiatry. 11: 615, 663-79. PMID 16636682 DOI: 10.1038/Sj.Mp.4001830 |
0.493 |
|
| 2006 |
Karssen AM, Li JZ, Her S, Patel PD, Meng F, Evans SJ, Vawter MP, Tomita H, Choudary PV, Bunney WE, Jones EG, Watson SJ, Akil H, Myers RM, Schatzberg AF, et al. Application of microarray technology in primate behavioral neuroscience research. Methods (San Diego, Calif.). 38: 227-34. PMID 16469505 DOI: 10.1016/J.Ymeth.2005.09.017 |
0.376 |
|
| 2006 |
Cooper SJ, Trinklein ND, Anton ED, Nguyen L, Myers RM. Comprehensive analysis of transcriptional promoter structure and function in 1% of the human genome. Genome Research. 16: 1-10. PMID 16344566 DOI: 10.1101/Gr.4222606 |
0.814 |
|
| 2006 |
Vawter MP, Tomita H, Meng F, Bolstad B, Li J, Evans S, Choudary P, Atz M, Shao L, Neal C, Walsh DM, Burmeister M, Speed T, Myers R, Jones EG, et al. Mitochondrial related gene expression changes are sensitive to agonal-pH state Molecular Psychiatry. 11: 615-615. DOI: 10.1038/Sj.Mp.4001850 |
0.428 |
|
| 2005 |
Dai M, Wang P, Boyd AD, Kostov G, Athey B, Jones EG, Bunney WE, Myers RM, Speed TP, Akil H, Watson SJ, Meng F. Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data. Nucleic Acids Research. 33: e175. PMID 16284200 DOI: 10.1093/Nar/Gni179 |
0.389 |
|
| 2005 |
Kim TH, Barrera LO, Qu C, Van Calcar S, Trinklein ND, Cooper SJ, Luna RM, Glass CK, Rosenfeld MG, Myers RM, Ren B. Direct isolation and identification of promoters in the human genome. Genome Research. 15: 830-9. PMID 15899964 DOI: 10.1101/Gr.3430605 |
0.824 |
|
| 2005 |
Carlson CS, Aldred SF, Lee PK, Tracy RP, Schwartz SM, Rieder M, Liu K, Williams OD, Iribarren C, Lewis EC, Fornage M, Boerwinkle E, Gross M, Jaquish C, Nickerson DA, ... Myers RM, et al. Polymorphisms within the C-reactive protein (CRP) promoter region are associated with plasma CRP levels. American Journal of Human Genetics. 77: 64-77. PMID 15897982 DOI: 10.1086/431366 |
0.303 |
|
| 2005 |
Hillier LW, Graves TA, Fulton RS, Fulton LA, Pepin KH, Minx P, Wagner-McPherson C, Layman D, Wylie K, Sekhon M, Becker MC, Fewell GA, Delehaunty KD, Miner TL, Nash WE, ... ... Myers RM, et al. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. Nature. 434: 724-31. PMID 15815621 DOI: 10.1038/Nature03466 |
0.327 |
|
| 2004 |
Martin J, Han C, Gordon LA, Terry A, Prabhakar S, She X, Xie G, Hellsten U, Chan YM, Altherr M, Couronne O, Aerts A, Bajorek E, Black S, Blumer H, ... ... Myers RM, et al. The sequence and analysis of duplication-rich human chromosome 16. Nature. 432: 988-94. PMID 15616553 DOI: 10.1038/Nature03187 |
0.616 |
|
| 2004 |
Noonan JP, Grimwood J, Danke J, Schmutz J, Dickson M, Amemiya CT, Myers RM. Coelacanth genome sequence reveals the evolutionary history of vertebrate genes. Genome Research. 14: 2397-405. PMID 15545497 DOI: 10.1101/Gr.2972804 |
0.625 |
|
| 2004 |
Feingold EA, Good PJ, Guyer MS, Kamholz S, Liefer L, Wetterstrand K, Collins FS, Gingeras TR, Kampa D, Sekinger EA, Cheng J, Hirsch H, Ghosh S, Zhu Z, Patel S, ... ... Myers RM, et al. The ENCODE (ENCyclopedia of DNA Elements) Project Science. 306: 636-640. PMID 15499007 DOI: 10.1126/Science.1105136 |
0.796 |
|
| 2004 |
Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, ... ... Myers RM, et al. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Research. 14: 2121-7. PMID 15489334 DOI: 10.1101/Gr.2596504 |
0.357 |
|
| 2004 |
Schmutz J, Martin J, Terry A, Couronne O, Grimwood J, Lowry S, Gordon LA, Scott D, Xie G, Huang W, Hellsten U, Tran-Gyamfi M, She X, Prabhakar S, Aerts A, ... ... Myers RM, et al. The DNA sequence and comparative analysis of human chromosome 5. Nature. 431: 268-74. PMID 15372022 DOI: 10.1038/Nature02919 |
0.76 |
|
| 2004 |
Trinklein ND, Chen WC, Kingston RE, Myers RM. Transcriptional regulation and binding of heat shock factor 1 and heat shock factor 2 to 32 human heat shock genes during thermal stress and differentiation. Cell Stress & Chaperones. 9: 21-8. PMID 15270074 DOI: 10.1379/1466-1268(2004)009<0021:Traboh>2.0.Co;2 |
0.677 |
|
| 2004 |
Schmutz J, Wheeler J, Grimwood J, Dickson M, Yang J, Caoile C, Bajorek E, Black S, Chan YM, Denys M, Escobar J, Flowers D, Fotopulos D, Garcia C, Gomez M, ... ... Myers RM, et al. Quality assessment of the human genome sequence. Nature. 429: 365-8. PMID 15164052 DOI: 10.1038/Nature02390 |
0.348 |
|
| 2004 |
Grimwood J, Gordon LA, Olsen A, Terry A, Schmutz J, Lamerdin J, Hellsten U, Goodstein D, Couronne O, Tran-Gyamfi M, Aerts A, Altherr M, Ashworth L, Bajorek E, Black S, ... ... Myers RM, et al. The DNA sequence and biology of human chromosome 19. Nature. 428: 529-35. PMID 15057824 DOI: 10.1038/Nature02399 |
0.602 |
|
| 2004 |
Li J, Nguyen L, Gleason C, Lotspeich L, Spiker D, Risch N, Myers RM. Lack of evidence for an association between WNT2 and RELN polymorphisms and autism. American Journal of Medical Genetics. Part B, Neuropsychiatric Genetics : the Official Publication of the International Society of Psychiatric Genetics. 126: 51-7. PMID 15048648 DOI: 10.1002/Ajmg.B.20122 |
0.376 |
|
| 2004 |
Murray JI, Whitfield ML, Trinklein ND, Myers RM, Brown PO, Botstein D. Diverse and specific gene expression responses to stresses in cultured human cells. Molecular Biology of the Cell. 15: 2361-74. PMID 15004229 DOI: 10.1091/Mbc.E03-11-0799 |
0.672 |
|
| 2004 |
Noonan JP, Grimwood J, Schmutz J, Dickson M, Myers RM. Gene conversion and the evolution of protocadherin gene cluster diversity. Genome Research. 14: 354-66. PMID 14993203 DOI: 10.1101/Gr.2133704 |
0.599 |
|
| 2004 |
Tomita H, Vawter MP, Walsh DM, Evans SJ, Choudary PV, Li J, Overman KM, Atz ME, Myers RM, Jones EG, Watson SJ, Akil H, Bunney WE. Effect of agonal and postmortem factors on gene expression profile: quality control in microarray analyses of postmortem human brain. Biological Psychiatry. 55: 346-52. PMID 14960286 DOI: 10.1016/J.Biopsych.2003.10.013 |
0.374 |
|
| 2004 |
Li JZ, Vawter MP, Walsh DM, Tomita H, Evans SJ, Choudary PV, Lopez JF, Avelar A, Shokoohi V, Chung T, Mesarwi O, Jones EG, Watson SJ, Akil H, Bunney WE, ... Myers RM, et al. Systematic changes in gene expression in postmortem human brains associated with tissue pH and terminal medical conditions. Human Molecular Genetics. 13: 609-16. PMID 14734628 DOI: 10.1093/Hmg/Ddh065 |
0.377 |
|
| 2004 |
Trinklein ND, Aldred SF, Hartman SJ, Schroeder DI, Otillar RP, Myers RM. An abundance of bidirectional promoters in the human genome. Genome Research. 14: 62-6. PMID 14707170 DOI: 10.1101/Gr.1982804 |
0.815 |
|
| 2004 |
Trinklein ND, Murray JI, Hartman SJ, Botstein D, Myers RM. The role of heat shock transcription factor 1 in the genome-wide regulation of the mammalian heat shock response. Molecular Biology of the Cell. 15: 1254-61. PMID 14668476 DOI: 10.1091/Mbc.E03-10-0738 |
0.683 |
|
| 2004 |
Kingsley DM, Zhu B, Osoegawa K, De Jong PJ, Schein J, Marra M, Peichel C, Amemiya C, Schluter D, Balabhadra S, Friedlander B, Cha YM, Dickson M, Grimwood J, Schmutz J, ... ... Myers R, et al. New genomic tools for molecular studies of evolutionary change in threespine sticklebacks Behaviour. 141: 1331-1344. DOI: 10.1163/1568539042948150 |
0.345 |
|
| 2003 |
Schmutz J, Wheeler J, Grimwood J, Dickson M, Myers RM. Assessing the quality of finished genomic sequence. Cold Spring Harbor Symposia On Quantitative Biology. 68: 31-38. PMID 15338600 DOI: 10.1101/Sqb.2003.68.31 |
0.301 |
|
| 2003 |
Murphy E, Yu D, Grimwood J, Schmutz J, Dickson M, Jarvis MA, Hahn G, Nelson JA, Myers RM, Shenk TE. Coding potential of laboratory and clinical strains of human cytomegalovirus. Proceedings of the National Academy of Sciences of the United States of America. 100: 14976-81. PMID 14657367 DOI: 10.1073/Pnas.2136652100 |
0.307 |
|
| 2003 |
Houseweart MK, Pennacchio LA, Vilaythong A, Peters C, Noebels JL, Myers RM. Cathepsin B but not cathepsins L or S contributes to the pathogenesis of Unverricht-Lundborg progressive myoclonus epilepsy (EPM1). Journal of Neurobiology. 56: 315-27. PMID 12918016 DOI: 10.1002/Neu.10253 |
0.525 |
|
| 2003 |
Khambata-Ford S, Liu Y, Gleason C, Dickson M, Altman RB, Batzoglou S, Myers RM. Identification of promoter regions in the human genome by using a retroviral plasmid library-based functional reporter gene assay. Genome Research. 13: 1765-74. PMID 12805274 DOI: 10.1101/Gr.529803 |
0.435 |
|
| 2003 |
Bunney WE, Bunney BG, Vawter MP, Tomita H, Li J, Evans SJ, Choudary PV, Myers RM, Jones EG, Watson SJ, Akil H. Microarray technology: a review of new strategies to discover candidate vulnerability genes in psychiatric disorders. The American Journal of Psychiatry. 160: 657-66. PMID 12668351 DOI: 10.1176/Appi.Ajp.160.4.657 |
0.353 |
|
| 2003 |
Noonan JP, Li J, Nguyen L, Caoile C, Dickson M, Grimwood J, Schmutz J, Feldman MW, Myers RM. Extensive linkage disequilibrium, a common 16.7-kilobase deletion, and evidence of balancing selection in the human protocadherin alpha cluster. American Journal of Human Genetics. 72: 621-35. PMID 12577201 DOI: 10.1086/368060 |
0.582 |
|
| 2003 |
Trinklein ND, Aldred SJ, Saldanha AJ, Myers RM. Identification and functional analysis of human transcriptional promoters. Genome Research. 13: 308-12. PMID 12566409 DOI: 10.1101/Gr.794803 |
0.737 |
|
| 2002 |
Shannon P, Pennacchio LA, Houseweart MK, Minassian BA, Myers RM. Neuropathological changes in a mouse model of progressive myoclonus epilepsy: cystatin B deficiency and Unverricht-Lundborg disease. Journal of Neuropathology and Experimental Neurology. 61: 1085-91. PMID 12484571 DOI: 10.1093/Jnen/61.12.1085 |
0.541 |
|
| 2002 |
Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, ... ... Myers RM, et al. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 99: 16899-903. PMID 12477932 DOI: 10.1073/Pnas.242603899 |
0.356 |
|
| 2002 |
Tabor HK, Risch NJ, Myers RM. Candidate-gene approaches for studying complex genetic traits: practical considerations. Nature Reviews. Genetics. 3: 391-7. PMID 11988764 DOI: 10.1038/Nrg796 |
0.65 |
|
| 2002 |
Li J, Tabor HK, Nguyen L, Gleason C, Lotspeich LJ, Spiker D, Risch N, Myers RM. Lack of association between HoxA1 and HoxB1 gene variants and autism in 110 multiplex families. American Journal of Medical Genetics. 114: 24-30. PMID 11840501 DOI: 10.1002/Ajmg.1618 |
0.68 |
|
| 2001 |
Lieuallen K, Pennacchio LA, Park M, Myers RM, Lennon GG. Cystatin B-deficient mice have increased expression of apoptosis and glial activation genes. Human Molecular Genetics. 10: 1867-71. PMID 11555622 DOI: 10.1093/Hmg/10.18.1867 |
0.31 |
|
| 2001 |
McPherson JD, Marra M, Hillier L, Waterston RH, Chinwalla A, Wallis J, Sekhon M, Wylie K, Mardis ER, Wilson RK, Fulton R, Kucaba TA, Wagner-McPherson C, Barbazuk WB, Gregory SG, ... ... Myers RM, et al. A physical map of the human genome. Nature. 409: 934-41. PMID 11237014 DOI: 10.1038/35057157 |
0.331 |
|
| 2001 |
Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, Devon K, Dewar K, Doyle M, FitzHugh W, Funke R, Gage D, Harris K, Heaford A, Howland J, ... ... Myers RM, et al. Initial sequencing and analysis of the human genome. Nature. 409: 860-921. PMID 11237011 DOI: 10.1038/35057062 |
0.354 |
|
| 2001 |
Wu Q, Zhang T, Cheng JF, Kim Y, Grimwood J, Schmutz J, Dickson M, Noonan JP, Zhang MQ, Myers RM, Maniatis T. Comparative DNA sequence analysis of mouse and human protocadherin gene clusters. Genome Research. 11: 389-404. PMID 11230163 DOI: 10.1101/Gr.167301 |
0.726 |
|
| 2001 |
Olivier M, Aggarwal A, Allen J, Almendras AA, Bajorek ES, Beasley EM, Brady SD, Bushard JM, Bustos VI, Chu A, Chung TR, De Witte A, Denys ME, Dominguez R, Fang NY, ... ... Myers RM, et al. A high-resolution radiation hybrid map of the human genome draft sequence. Science (New York, N.Y.). 291: 1298-302. PMID 11181994 DOI: 10.1126/Science.1057437 |
0.333 |
|
| 2001 |
Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, Devon K, Dewar K, Doyle M, Fitzhugh W, Funke R, Gage D, Harris K, Heaford A, Howland J, ... ... Myers RM, et al. Erratum: Initial sequencing and analysis of the human genome: International Human Genome Sequencing Consortium (Nature (2001) 409 (860-921)) Nature. 412: 565-566. DOI: 10.1038/35087627 |
0.348 |
|
| 2000 |
Li Z, Karlovich CA, Fish MP, Scott MP, Myers RM. A putative Drosophila homolog of the Huntington's disease gene. Human Molecular Genetics. 8: 1807-15. PMID 10441347 DOI: 10.1093/Hmg/8.9.1807 |
0.397 |
|
| 1999 |
Risch N, Spiker D, Lotspeich L, Nouri N, Hinds D, Hallmayer J, Kalaydjieva L, McCague P, Dimiceli S, Pitts T, Nguyen L, Yang J, Harper C, Thorpe D, Vermeer S, ... ... Myers RM, et al. A genomic screen of autism: evidence for a multilocus etiology. American Journal of Human Genetics. 65: 493-507. PMID 10417292 DOI: 10.1086/302497 |
0.32 |
|
| 1998 |
Karlovich CA, John RM, Ramirez L, Stainier DYR, Myers RM. Characterization of the Huntington's disease (HD) gene homolog in the zebrafish Danio rerio Gene. 217: 117-125. PMID 9795179 DOI: 10.1016/S0378-1119(98)00342-4 |
0.356 |
|
| 1998 |
Deloukas P, Schuler GD, Gyapay G, Beasley EM, Soderlund C, Rodriguez-Tomé P, Hui L, Matise TC, McKusick KB, Beckmann JS, Bentolila S, Bihoreau M, Birren BB, Browne J, Butler A, ... ... Myers RM, et al. A physical map of 30,000 human genes. Science (New York, N.Y.). 282: 744-6. PMID 9784132 DOI: 10.1126/Science.282.5389.744 |
0.344 |
|
| 1997 |
Eisen JA, Kaiser D, Myers RM. Gastrogenomic delights: a movable feast. Nature Medicine. 3: 1076-8. PMID 9334711 DOI: 10.1038/Nm1097-1076 |
0.3 |
|
| 1997 |
Bell SM, Shaw M, Jou YS, Myers RM, Knowles MA. Identification and characterization of the human homologue of SH3BP2, an SH3 binding domain protein within a common region of deletion at 4p16.3 involved in bladder cancer. Genomics. 44: 163-70. PMID 9299232 DOI: 10.1006/Geno.1997.4849 |
0.413 |
|
| 1997 |
Virtaneva K, D'Amato E, Miao J, Koskiniemi M, Norio R, Avanzini G, Franceschetti S, Michelucci R, Tassinari CA, Omer S, Pennacchio LA, Myers RM, Dieguez-Lucena JL, Krahe R, de la Chapelle A, et al. Unstable minisatellite expansion causing recessively inherited myoclonus epilepsy, EPM1. Nature Genetics. 15: 393-6. PMID 9090386 DOI: 10.1038/Ng0497-393 |
0.329 |
|
| 1997 |
Boguski M, Chakravarti A, Gibbs R, Green E, Myers RM. The end of the beginning: the race to begin human genome sequencing. Genome Research. 6: 771-2. PMID 8889545 DOI: 10.1101/Gr.6.9.771 |
0.341 |
|
| 1996 |
Boguski MS, Cox DR, Myers RM. Genomes and evolution. Current Opinion in Genetics & Development. 6: 683-685. PMID 9000014 DOI: 10.1016/S0959-437X(96)80020-7 |
0.307 |
|
| 1996 |
Stone NE, Fan JB, Willour V, Pennacchio LA, Warrington JA, Hu A, de la Chapelle A, Lehesjoki AE, Cox DR, Myers RM. Construction of a 750-kb bacterial clone contig and restriction map in the region of human chromosome 21 containing the progressive myoclonus epilepsy gene. Genome Research. 6: 218-25. PMID 8963899 DOI: 10.1101/Gr.6.3.218 |
0.33 |
|
| 1996 |
Bell SM, Zuo J, Myers RM, Knowles MA. Fluorescence in situ hybridization deletion mapping at 4p16.3 in bladder cancer cell lines refines the localisation of the critical interval to 30 kb. Genes, Chromosomes & Cancer. 17: 108-17. PMID 8913728 DOI: 10.1002/(Sici)1098-2264(199610)17:2<108::Aid-Gcc6>3.0.Co;2-9 |
0.326 |
|
| 1996 |
Schuler GD, Boguski MS, Stewart EA, Stein LD, Gyapay G, Rice K, White RE, Rodriguez-Tomé P, Aggarwal A, Bajorek E, Bentolila S, Birren BB, Butler A, Castle AB, Chiannilkulchai N, ... ... Myers RM, et al. A gene map of the human genome. Science (New York, N.Y.). 274: 540-6. PMID 8849440 DOI: 10.1126/Science.274.5287.540 |
0.357 |
|
| 1996 |
Johnson RL, Rothman AL, Xie J, Goodrich LV, Bare JW, Bonifas JM, Quinn AG, Myers RM, Cox DR, Epstein EH, Scott MP. Human homolog of patched, a candidate gene for the basal cell nevus syndrome. Science (New York, N.Y.). 272: 1668-71. PMID 8658145 DOI: 10.1126/Science.272.5268.1668 |
0.361 |
|
| 1996 |
Pennacchio LA, Lehesjoki AE, Stone NE, Willour VL, Virtaneva K, Miao J, D'Amato E, Ramirez L, Faham M, Koskiniemi M, Warrington JA, Norio R, de la Chapelle A, Cox DR, Myers RM. Mutations in the gene encoding cystatin B in progressive myoclonus epilepsy (EPM1) Science (New York, N.Y.). 271: 1731-4. PMID 8596935 DOI: 10.1126/Science.271.5256.1731 |
0.306 |
|
| 1995 |
Patil N, Cox DR, Bhat D, Faham M, Myers RM, Peterson AS. A potassium channel mutation in weaver mice implicates membrane excitability in granule cell differentiation. Nature Genetics. 11: 126-9. PMID 7550338 DOI: 10.1038/ng1095-126 |
0.332 |
|
| 1995 |
Jou YS, Goold RD, Myers RM. Localization of the alpha 2-macroglobulin receptor-associated protein 1 gene (LRPAP1) and other gene fragments to human chromosome 4p16.3 by direct cDNA selection. Genomics. 24: 410-3. PMID 7535288 DOI: 10.1006/Geno.1994.1643 |
0.312 |
|
| 1994 |
Patil N, Peterson A, Rothman A, De Jong PJ, Myers RM, Cox DR. A high resolution physical map of 2.5 Mbp of the Down syndrome region on chromosome 21 Human Molecular Genetics. 3: 1811-1817. PMID 7849705 DOI: 10.1093/Hmg/3.10.1811 |
0.412 |
|
| 1994 |
Peterson A, Patil N, Robbins C, Wang L, Cox DR, Myers RM. A transcript map of the Down syndrome critical region on chromosome 21 Human Molecular Genetics. 3: 1735-1742. PMID 7849696 DOI: 10.1093/Hmg/3.10.1735 |
0.46 |
|
| 1994 |
John RM, Robbins CA, Myers RM. Identification of genes within CpG-enriched DNA from human chromosome 4p16.3 Human Molecular Genetics. 3: 1611-1616. PMID 7530549 DOI: 10.1093/Hmg/3.9.1611 |
0.396 |
|
| 1993 |
Hartzog GA, Myers RM. Discrimination among potential activators of the β-globin CACCC element by correlation of binding and transcriptional properties Molecular and Cellular Biology. 13: 44-56. PMID 8417342 DOI: 10.1128/Mcb.13.1.44 |
0.689 |
|
| 1993 |
Zuo J, Robbins C, Taillon-Miller P, Cox DR, Myers RM. Cloning of the Huntington disease region in yeast artificial chromosomes. Human Molecular Genetics. 1: 149-59. PMID 1303170 DOI: 10.1093/Hmg/1.3.149 |
0.355 |
|
| 1991 |
Burmeister M, Kim S, Price ER, de Lange T, Tantravahi U, Myers RM, Cox DR. A map of the distal region of the long arm of human chromosome 21 constructed by radiation hybrid mapping and pulsed-field gel electrophoresis. Genomics. 9: 19-30. PMID 2004760 DOI: 10.1016/0888-7543(91)90216-2 |
0.428 |
|
| 1991 |
Gaensler KM, Burmeister M, Brownstein BH, Taillon-Miller P, Myers RM. Physical mapping of yeast artificial chromosomes containing sequences from the human beta-globin gene region. Genomics. 10: 976-84. PMID 1916829 DOI: 10.1016/0888-7543(91)90188-K |
0.514 |
|
| 1991 |
Maricq AV, Peterson AS, Brake AJ, Myers RM, Julius D. Primary structure and functional expression of the 5HT3 receptor, a serotonin-gated ion channel. Science (New York, N.Y.). 254: 432-7. PMID 1718042 DOI: 10.1126/Science.1718042 |
0.308 |
|
| 1991 |
Burmeister M, Cox DR, Myers RM. TaqI RFLP at D21S137. Nucleic Acids Research. 19: 4020. PMID 1677761 DOI: 10.1093/Nar/19.14.4020 |
0.46 |
|
| 1990 |
Cox DR, Burmeister M, Price ER, Kim S, Myers RM. Radiation hybrid mapping: a somatic cell genetic method for constructing high-resolution maps of mammalian chromosomes. Science (New York, N.Y.). 250: 245-50. PMID 2218528 DOI: 10.1126/SCIENCE.2218528 |
0.423 |
|
| 1989 |
Sheffield VC, Cox DR, Lerman LS, Myers RM. Attachment of a 40-base-pair G + C-rich sequence (GC-clamp) to genomic DNA fragments by the polymerase chain reaction results in improved detection of single-base changes. Proceedings of the National Academy of Sciences of the United States of America. 86: 232-6. PMID 2643100 DOI: 10.1073/Pnas.86.1.232 |
0.682 |
|
| 1987 |
Myers RM, Maniatis T, Lerman LS. Detection and localization of single base changes by denaturing gradient gel electrophoresis. Methods in Enzymology. 155: 501-27. PMID 3431470 DOI: 10.1016/0076-6879(87)55033-9 |
0.719 |
|
| 1986 |
Myers RM, Larin Z, Maniatis T. Detection of single base substitutions by ribonuclease cleavage at mismatches in RNA:DNA duplexes. Science (New York, N.Y.). 230: 1242-6. PMID 4071043 DOI: 10.1126/Science.4071043 |
0.527 |
|
| 1986 |
Myers RM, Tilly K, Maniatis T. Fine structure genetic analysis of a beta-globin promoter. Science (New York, N.Y.). 232: 613-8. PMID 3457470 DOI: 10.1126/Science.3457470 |
0.555 |
|
| 1985 |
Myers RM, Fischer SG, Lerman LS, Maniatis T. Nearly all single base substitutions in DNA fragments joined to a GC-clamp can be detected by denaturing gradient gel electrophoresis. Nucleic Acids Research. 13: 3131-45. PMID 4000972 DOI: 10.1093/Nar/13.9.3131 |
0.694 |
|
| 1985 |
Myers RM, Lumelsky N, Lerman LS, Maniatis T. Detection of single base substitutions in total genomic DNA. Nature. 313: 495-8. PMID 3969155 DOI: 10.1038/313495a0 |
0.71 |
|
| 1985 |
Myers RM, Lerman LS, Maniatis T. A general method for saturation mutagenesis of cloned DNA fragments. Science (New York, N.Y.). 229: 242-7. PMID 2990046 DOI: 10.1126/Science.2990046 |
0.715 |
|
| 1985 |
Myers RM, Fischer SG, Maniatis T, Lerman LS. Modification of the melting properties of duplex DNA by attachment of a GC-rich DNA sequence as determined by denaturing gradient gel electrophoresis. Nucleic Acids Research. 13: 3111-29. PMID 2987873 DOI: 10.1093/Nar/13.9.3111 |
0.704 |
|
| 1981 |
Myers RM, Tjian R. Construction and analysis of simian virus 40 origins defective in tumor antigen binding and DNA replication. Proceedings of the National Academy of Sciences of the United States of America. 77: 6491-5. PMID 6256739 DOI: 10.1073/Pnas.77.11.6491 |
0.518 |
|
| 1981 |
Rio D, Robbins A, Myers R, Tjian R. Regulation of simian virus 40 early transcription in vitro by a purified tumor antigen. Proceedings of the National Academy of Sciences of the United States of America. 77: 5706-10. PMID 6255460 DOI: 10.1073/Pnas.77.10.5706 |
0.561 |
|
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