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Joshua W. Shaevitz - Publications

Affiliations: 
2007- Physics Princeton University, Princeton, NJ 
Area:
biophysics
Website:
https://www.princeton.edu/physics/people/display_person.xml?netid=shaevitz&display=faculty

74 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Hallinen KM, Dempsey R, Scholz M, Yu X, Linder A, Randi F, Sharma AK, Shaevitz JW, Leifer AM. Decoding locomotion from population neural activity in moving C. elegans. Elife. 10. PMID 34323218 DOI: 10.7554/eLife.66135  0.88
2021 Han E, Zhu L, Shaevitz JW, Stone HA. Low-Reynolds-number, biflagellated Quincke swimmers with multiple forms of motion. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34266946 DOI: 10.1073/pnas.2022000118  0.68
2021 Ellison CK, Dalia TN, Klancher CA, Shaevitz JW, Gitai Z, Dalia AB. Acinetobacter baylyi regulates type IV pilus synthesis by employing two extension motors and a motor protein inhibitor. Nature Communications. 12: 3744. PMID 34145281 DOI: 10.1038/s41467-021-24124-6  1
2021 Koch MD, Fei C, Wingreen NS, Shaevitz JW, Gitai Z. Competitive binding of independent extension and retraction motors explains the quantitative dynamics of type IV pili. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33593905 DOI: 10.1073/pnas.2014926118  1
2020 Klibaite U, Shaevitz JW. Paired fruit flies synchronize behavior: Uncovering social interactions in Drosophila melanogaster. Plos Computational Biology. 16: e1008230. PMID 33021989 DOI: 10.1371/journal.pcbi.1008230  1
2020 Thawani A, Rale MJ, Coudray N, Bhabha G, Stone HA, Shaevitz JW, Petry S. The transition state and regulation of γ-TuRC-mediated microtubule nucleation revealed by single molecule microscopy. Elife. 9. PMID 32538784 DOI: 10.7554/Elife.54253  0.68
2020 Amin MJ, Petry S, Yang H, Shaevitz JW. Uniform intensity in multifocal microscopy using a spatial light modulator. Plos One. 15: e0230217. PMID 32160259 DOI: 10.1371/Journal.Pone.0230217  0.44
2020 Taylor JA, Bratton BP, Sichel SR, Blair KM, Jacobs HM, DeMeester KE, Kuru E, Gray J, Biboy J, VanNieuwenhze MS, Vollmer W, Grimes CL, Shaevitz JW, Salama NR. Distinct cytoskeletal proteins define zones of enhanced cell wall synthesis in . Elife. 9. PMID 31916938 DOI: 10.7554/Elife.52482  1
2020 Thawani A, Rale MJ, Coudray N, Bhabha G, Stone HA, Shaevitz JW, Petry S. Author response: The transition state and regulation of γ-TuRC-mediated microtubule nucleation revealed by single molecule microscopy Elife. DOI: 10.7554/Elife.54253.Sa2  0.68
2019 Simsek AN, Braeutigam A, Koch MD, Shaevitz JW, Huang Y, Gompper G, Sabass B. Substrate-rigidity dependent migration of an idealized twitching bacterium. Soft Matter. PMID 31334524 DOI: 10.1039/C9Sm00541B  0.68
2019 Liu G, Patch A, Bahar F, Yllanes D, Welch RD, Marchetti MC, Thutupalli S, Shaevitz JW. Self-Driven Phase Transitions Drive Myxococcus xanthus Fruiting Body Formation. Physical Review Letters. 122: 248102. PMID 31322369 DOI: 10.1103/Physrevlett.122.248102  1
2019 Thawani A, Stone HA, Shaevitz JW, Petry S. Spatiotemporal organization of branched microtubule networks. Elife. 8. PMID 31066674 DOI: 10.7554/Elife.43890  0.68
2019 Taylor JA, Bratton BP, Sichel SR, Blair KM, Jacobs HM, DeMeester KE, Kuru E, Gray J, Biboy J, VanNieuwenhze MS, Vollmer W, Grimes CL, Shaevitz JW, Salama NR. Author response: Distinct cytoskeletal proteins define zones of enhanced cell wall synthesis in Helicobacter pylori Elife. DOI: 10.7554/Elife.52482.Sa2  1
2019 Thawani A, Stone HA, Shaevitz JW, Petry S. Author response: Spatiotemporal organization of branched microtubule networks Elife. DOI: 10.7554/Elife.43890.028  0.68
2018 Bratton BP, Shaevitz JW, Gitai Z, Morgenstein RM. MreB polymers and curvature localization are enhanced by RodZ and predict E. coli's cylindrical uniformity. Nature Communications. 9: 2797. PMID 30022070 DOI: 10.1038/S41467-018-05186-5  1
2018 Guzzo M, Murray SM, Martineau E, Lhospice S, Baronian G, My L, Zhang Y, Espinosa L, Vincentelli R, Bratton BP, Shaevitz JW, Molle V, Howard M, Mignot T. A gated relaxation oscillator mediated by FrzX controls morphogenetic movements in Myxococcus xanthus. Nature Microbiology. PMID 30013238 DOI: 10.1038/S41564-018-0203-X  1
2018 Liu M, Sharma AK, Shaevitz J, Leifer AM. Temporal processing and context dependency in response to mechanosensation. Elife. 7. PMID 29943731 DOI: 10.7554/Elife.36419  0.88
2018 Cande J, Namiki S, Qiu J, Korff W, Card GM, Shaevitz JW, Stern DL, Berman GJ. Optogenetic dissection of descending behavioral control in . Elife. 7. PMID 29943729 DOI: 10.7554/Elife.34275  1
2018 Liu M, Sharma AK, Shaevitz JW, Leifer AM. Author response: Temporal processing and context dependency in Caenorhabditis elegans response to mechanosensation Elife. DOI: 10.7554/Elife.36419.043  0.88
2018 Cande J, Namiki S, Qiu J, Korff W, Card GM, Shaevitz JW, Stern DL, Berman GJ. Author response: Optogenetic dissection of descending behavioral control in Drosophila Elife. DOI: 10.7554/Elife.34275.030  1
2017 Liu GS, Bratton BP, Gitai Z, Shaevitz JW. The effect of antibiotics on protein diffusion in the Escherichia coli cytoplasmic membrane. Plos One. 12: e0185810. PMID 28977034 DOI: 10.1371/Journal.Pone.0185810  1
2017 Sabass B, Koch MD, Liu G, Stone HA, Shaevitz JW. Force generation by groups of migrating bacteria. Proceedings of the National Academy of Sciences of the United States of America. PMID 28655845 DOI: 10.1073/Pnas.1621469114  0.68
2017 Nguyen JP, Linder AN, Plummer GS, Shaevitz JW, Leifer AM. Automatically tracking neurons in a moving and deforming brain. Plos Computational Biology. 13: e1005517. PMID 28545068 DOI: 10.1371/Journal.Pcbi.1005517  1
2017 Klibaite U, Berman G, Cande J, Stern D, Shaevitz J. An unsupervised method for quantifying the behavior of paired animals. Physical Biology. PMID 28140374 DOI: 10.1088/1478-3975/Aa5C50  1
2017 Bartlett TM, Bratton BP, Duvshani A, Miguel A, Sheng Y, Martin NR, Nguyen JP, Persat A, Desmarais SM, VanNieuwenhze MS, Huang KC, Zhu J, Shaevitz JW, Gitai Z. A Periplasmic Polymer Curves Vibrio cholerae and Promotes Pathogenesis. Cell. 168: 172-185.e15. PMID 28086090 DOI: 10.1016/J.Cell.2016.12.019  1
2017 Koch MD, Shaevitz JW. Introduction to Optical Tweezers. Methods in Molecular Biology (Clifton, N.J.). 1486: 3-24. PMID 27844423 DOI: 10.1007/978-1-4939-6421-5_1  0.68
2016 Berman GJ, Bialek W, Shaevitz JW. Predictability and hierarchy in Drosophila behavior. Proceedings of the National Academy of Sciences of the United States of America. PMID 27702892 DOI: 10.1073/Pnas.1607601113  1
2016 Ouzounov N, Nguyen JP, Bratton BP, Jacobowitz D, Gitai Z, Shaevitz JW. MreB Orientation Correlates with Cell Diameter in Escherichia coli. Biophysical Journal. 111: 1035-43. PMID 27602731 DOI: 10.1016/J.Bpj.2016.07.017  1
2016 Nguyen JP, Bratton BP, Shaevitz JW. Biophysical Measurements of Bacterial Cell Shape. Methods in Molecular Biology (Clifton, N.J.). 1440: 227-45. PMID 27311676 DOI: 10.1007/978-1-4939-3676-2_17  1
2016 Wang Q, Taliaferro JM, Klibaite U, Hilgers V, Shaevitz JW, Rio DC. The PSI-U1 snRNP interaction regulates male mating behavior in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. PMID 27114556 DOI: 10.1073/Pnas.1600936113  1
2016 Nguyen JP, Shipley FB, Linder AN, Plummer GS, Liu M, Setru SU, Shaevitz JW, Leifer AM. Whole-brain calcium imaging with cellular resolution in freely behaving Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America. 113: E1074-81. PMID 26712014 DOI: 10.1073/Pnas.1507110112  1
2015 Morgenstein RM, Bratton BP, Nguyen JP, Ouzounov N, Shaevitz JW, Gitai Z. RodZ links MreB to cell wall synthesis to mediate MreB rotation and robust morphogenesis. Proceedings of the National Academy of Sciences of the United States of America. 112: 12510-5. PMID 26396257 DOI: 10.1073/Pnas.1509610112  1
2015 Bratton BP, Shaevitz JW. Simple Experimental Methods for Determining the Apparent Focal Shift in a Microscope System. Plos One. 10: e0134616. PMID 26270960 DOI: 10.1371/Journal.Pone.0134616  1
2015 Thutupalli S, Sun M, Bunyak F, Palaniappan K, Shaevitz JW. Directional reversals enable Myxococcus xanthus cells to produce collective one-dimensional streams during fruiting-body formation. Journal of the Royal Society, Interface / the Royal Society. 12: 20150049. PMID 26246416 DOI: 10.1098/Rsif.2015.0049  1
2014 Pilizota T, Shaevitz JW. Origins of Escherichia coli growth rate and cell shape changes at high external osmolality. Biophysical Journal. 107: 1962-9. PMID 25418177 DOI: 10.1016/J.Bpj.2014.08.025  1
2014 Berman GJ, Choi DM, Bialek W, Shaevitz JW. Mapping the stereotyped behaviour of freely moving fruit flies. Journal of the Royal Society, Interface / the Royal Society. 11. PMID 25142523 DOI: 10.1098/Rsif.2014.0672  1
2014 Polyakov O, He B, Swan M, Shaevitz JW, Kaschube M, Wieschaus E. Passive mechanical forces control cell-shape change during Drosophila ventral furrow formation. Biophysical Journal. 107: 998-1010. PMID 25140436 DOI: 10.1016/J.Bpj.2014.07.013  0.2
2014 Billings G, Ouzounov N, Ursell T, Desmarais SM, Shaevitz J, Gitai Z, Huang KC. De novo morphogenesis in L-forms via geometric control of cell growth. Molecular Microbiology. 93: 883-96. PMID 24995493 DOI: 10.1111/Mmi.12703  1
2014 Balagam R, Litwin DB, Czerwinski F, Sun M, Kaplan HB, Shaevitz JW, Igoshin OA. Myxococcus xanthus gliding motors are elastically coupled to the substrate as predicted by the focal adhesion model of gliding motility. Plos Computational Biology. 10: e1003619. PMID 24810164 DOI: 10.1371/Journal.Pcbi.1003619  1
2014 Deng Y, Sun M, Lin PH, Ma J, Shaevitz JW. Spatial covariance reconstructive (SCORE) super-resolution fluorescence microscopy. Plos One. 9: e94807. PMID 24788039 DOI: 10.1371/Journal.Pone.0094807  1
2014 Ursell TS, Nguyen J, Monds RD, Colavin A, Billings G, Ouzounov N, Gitai Z, Shaevitz JW, Huang KC. Rod-like bacterial shape is maintained by feedback between cell curvature and cytoskeletal localization. Proceedings of the National Academy of Sciences of the United States of America. 111: E1025-34. PMID 24550515 DOI: 10.1073/Pnas.1317174111  1
2014 Pilizota T, Shaevitz J. O12-5Origins of Escherichia coli growth rate and cell shape changes at high external osmolality New Biotechnology. 31. DOI: 10.1016/J.Nbt.2014.05.1717  1
2013 Wartel M, Ducret A, Thutupalli S, Czerwinski F, Le Gall AV, Mauriello EM, Bergam P, Brun YV, Shaevitz J, Mignot T. A versatile class of cell surface directional motors gives rise to gliding motility and sporulation in Myxococcus xanthus. Plos Biology. 11: e1001728. PMID 24339744 DOI: 10.1371/Journal.Pbio.1001728  1
2013 Deng Y, Coen P, Sun M, Shaevitz JW. Efficient multiple object tracking using mutually repulsive active membranes. Plos One. 8: e65769. PMID 23799046 DOI: 10.1371/Journal.Pone.0065769  1
2013 Pilizota T, Shaevitz JW. Plasmolysis and cell shape depend on solute outer-membrane permeability during hyperosmotic shock in E. coli. Biophysical Journal. 104: 2733-42. PMID 23790382 DOI: 10.1016/J.Bpj.2013.05.011  1
2013 Borenstein DB, Meir Y, Shaevitz JW, Wingreen NS. Non-local interaction via diffusible resource prevents coexistence of cooperators and cheaters in a lattice model. Plos One. 8: e63304. PMID 23691017 DOI: 10.1371/Journal.Pone.0063304  1
2013 Wang S, Shaevitz JW. The mechanics of shape in prokaryotes. Frontiers in Bioscience (Scholar Edition). 5: 564-74. PMID 23277069 DOI: 10.2741/S390  1
2012 Huang KC, Ehrhardt DW, Shaevitz JW. The molecular origins of chiral growth in walled cells. Current Opinion in Microbiology. 15: 707-14. PMID 23194654 DOI: 10.1016/J.Mib.2012.11.002  1
2012 Pilizota T, Shaevitz JW. Fast, multiphase volume adaptation to hyperosmotic shock by Escherichia coli. Plos One. 7: e35205. PMID 22514721 DOI: 10.1371/Journal.Pone.0035205  1
2012 van Teeffelen S, Shaevitz JW, Gitai Z. Image analysis in fluorescence microscopy: bacterial dynamics as a case study. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 34: 427-36. PMID 22415868 DOI: 10.1002/Bies.201100148  1
2012 Wang S, Furchtgott L, Huang KC, Shaevitz JW. Helical insertion of peptidoglycan produces chiral ordering of the bacterial cell wall. Proceedings of the National Academy of Sciences of the United States of America. 109: E595-604. PMID 22343529 DOI: 10.1073/Pnas.1117132109  1
2011 Deng Y, Sun M, Shaevitz JW. Direct measurement of cell wall stress stiffening and turgor pressure in live bacterial cells. Physical Review Letters. 107: 158101. PMID 22107320 DOI: 10.1103/Physrevlett.107.158101  1
2011 van Teeffelen S, Wang S, Furchtgott L, Huang KC, Wingreen NS, Shaevitz JW, Gitai Z. The bacterial actin MreB rotates, and rotation depends on cell-wall assembly. Proceedings of the National Academy of Sciences of the United States of America. 108: 15822-7. PMID 21903929 DOI: 10.1073/Pnas.1108999108  1
2011 Sun M, Wartel M, Cascales E, Shaevitz JW, Mignot T. Motor-driven intracellular transport powers bacterial gliding motility. Proceedings of the National Academy of Sciences of the United States of America. 108: 7559-64. PMID 21482768 DOI: 10.1073/Pnas.1101101108  1
2010 Shaevitz JW, Gitai Z. The structure and function of bacterial actin homologs. Cold Spring Harbor Perspectives in Biology. 2: a000364. PMID 20630996 DOI: 10.1101/Cshperspect.A000364  1
2010 Wang S, Arellano-Santoyo H, Combs PA, Shaevitz JW. Actin-like cytoskeleton filaments contribute to cell mechanics in bacteria. Proceedings of the National Academy of Sciences of the United States of America. 107: 9182-5. PMID 20439764 DOI: 10.1073/Pnas.0911517107  1
2010 Wang S, Arellano-Santoyo H, Combs PA, Shaevitz JW. Measuring the bending stiffness of bacterial cells using an optical trap. Journal of Visualized Experiments : Jove. PMID 20421864 DOI: 10.3791/2012  1
2010 Arigovindan M, Shaevitz J, McGowan J, Sedat JW, Agard DA. A Parallel Product-Convolution approach for representing the depth varying Point Spread Functions in 3D widefield microscopy based on principal component analysis. Optics Express. 18: 6461-76. PMID 20389670 DOI: 10.1364/Oe.18.006461  1
2010 Seibert MM, Boutet S, Svenda M, Ekeberg T, Maia FRNC, Bogan MJ, Tîmneanu N, Barty A, Hau-Riege S, Caleman C, Frank M, Benner H, Lee JY, Marchesini S, Shaevitz JW, et al. Femtosecond diffractive imaging of biological cells Journal of Physics B: Atomic, Molecular and Optical Physics. 43. DOI: 10.1088/0953-4075/43/19/194015  1
2010 Shaevitz J, Nørrelykke S. The cytoskeleton: I-beams of the cell Physics Today. 63: 60-61. DOI: 10.1063/1.3326997  1
2009 Deng Y, Shaevitz JW. Effect of aberration on height calibration in three-dimensional localization-based microscopy and particle tracking. Applied Optics. 48: 1886-90. PMID 19340142 DOI: 10.1364/Ao.48.001886  1
2008 Rosenbluth MJ, Crow A, Shaevitz JW, Fletcher DA. Slow stress propagation in adherent cells. Biophysical Journal. 95: 6052-9. PMID 18805929 DOI: 10.1529/Biophysj.108.139139  0.96
2008 Shaevitz JW, Fletcher DA. Curvature and torsion in growing actin networks. Physical Biology. 5: 026006. PMID 18560043 DOI: 10.1088/1478-3975/5/2/026006  0.96
2008 Marchesini S, Boutet S, Sakdinawat AE, Bogan MJ, Bajt S, Barty A, Chapman HN, Frank M, Hau-Riege SP, Szöke A, Cui C, Shapiro DA, Howells MR, Spence JCH, Shaevitz JW, et al. Massively parallel X-ray holography Nature Photonics. 2: 560-563. DOI: 10.1038/Nphoton.2008.154  1
2007 Shaevitz JW, Fletcher DA. Load fluctuations drive actin network growth. Proceedings of the National Academy of Sciences of the United States of America. 104: 15688-92. PMID 17895390 DOI: 10.1073/Pnas.0702601104  0.96
2007 Shaevitz JW, Fletcher DA. Enhanced three-dimensional deconvolution microscopy using a measured depth-varying point-spread function. Journal of the Optical Society of America. a, Optics, Image Science, and Vision. 24: 2622-7. PMID 17767232 DOI: 10.1364/Josaa.24.002622  0.96
2007 Mignot T, Shaevitz JW, Hartzell PL, Zusman DR. Evidence that focal adhesion complexes power bacterial gliding motility. Science (New York, N.Y.). 315: 853-6. PMID 17289998 DOI: 10.1126/Science.1137223  1
2005 Abbondanzieri EA, Greenleaf WJ, Shaevitz JW, Landick R, Block SM. Direct observation of base-pair stepping by RNA polymerase. Nature. 438: 460-5. PMID 16284617 DOI: 10.1038/Nature04268  1
2005 Abbondanzieri EA, Shaevitz JW, Block SM. Picocalorimetry of transcription by RNA polymerase. Biophysical Journal. 89: L61-3. PMID 16239336 DOI: 10.1529/Biophysj.105.074195  1
2005 Shaevitz JW, Lee JY, Fletcher DA. Spiroplasma swim by a processive change in body helicity. Cell. 122: 941-5. PMID 16179261 DOI: 10.1016/J.Cell.2005.07.004  0.96
2005 Shaevitz JW, Block SM, Schnitzer MJ. Statistical kinetics of macromolecular dynamics. Biophysical Journal. 89: 2277-85. PMID 16040752 DOI: 10.1529/Biophysj.105.064295  1
2003 Shaevitz JW, Abbondanzieri EA, Landick R, Block SM. Backtracking by single RNA polymerase molecules observed at near-base-pair resolution. Nature. 426: 684-7. PMID 14634670 DOI: 10.1038/Nature02191  1
2003 Block SM, Asbury CL, Shaevitz JW, Lang MJ. Probing the kinesin reaction cycle with a 2D optical force clamp. Proceedings of the National Academy of Sciences of the United States of America. 100: 2351-6. PMID 12591957 DOI: 10.1073/Pnas.0436709100  1
2002 Lang MJ, Asbury CL, Shaevitz JW, Block SM. An automated two-dimensional optical force clamp for single molecule studies. Biophysical Journal. 83: 491-501. PMID 12080136 DOI: 10.1016/S0006-3495(02)75185-0  1
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