Year |
Citation |
Score |
2008 |
Payne SH, Yau M, Smolka MB, Tanner S, Zhou H, Bafna V. Phosphorylation-specific MS/MS scoring for rapid and accurate phosphoproteome analysis. Journal of Proteome Research. 7: 3373-81. PMID 18563926 DOI: 10.1021/Pr800129M |
0.718 |
|
2008 |
Frank AM, Bandeira N, Shen Z, Tanner S, Briggs SP, Smith RD, Pevzner PA. Clustering millions of tandem mass spectra. Journal of Proteome Research. 7: 113-22. PMID 18067247 DOI: 10.1021/Pr070361E |
0.687 |
|
2008 |
Tanner S, Payne SH, Dasari S, Shen Z, Wilmarth PA, David LL, Loomis WF, Briggs SP, Bafna V. Accurate annotation of peptide modifications through unrestrictive database search. Journal of Proteome Research. 7: 170-81. PMID 18034453 DOI: 10.1021/Pr070444V |
0.717 |
|
2007 |
Gupta N, Tanner S, Jaitly N, Adkins JN, Lipton M, Edwards R, Romine M, Osterman A, Bafna V, Smith RD, Pevzner PA. Whole proteome analysis of post-translational modifications: applications of mass-spectrometry for proteogenomic annotation. Genome Research. 17: 1362-77. PMID 17690205 DOI: 10.1101/Gr.6427907 |
0.72 |
|
2007 |
Tanner S, Shen Z, Ng J, Florea L, Guigó R, Briggs SP, Bafna V. Improving gene annotation using peptide mass spectrometry. Genome Research. 17: 231-9. PMID 17189379 DOI: 10.1101/Gr.5646507 |
0.683 |
|
2006 |
Tanner S, Pevzner PA, Bafna V. Unrestrictive identification of post-translational modifications through peptide mass spectrometry. Nature Protocols. 1: 67-72. PMID 17406213 DOI: 10.1038/Nprot.2006.10 |
0.726 |
|
2006 |
Wilmarth PA, Tanner S, Dasari S, Nagalla SR, Riviere MA, Bafna V, Pevzner PA, David LL. Age-related changes in human crystallins determined from comparative analysis of post-translational modifications in young and aged lens: does deamidation contribute to crystallin insolubility? Journal of Proteome Research. 5: 2554-66. PMID 17022627 DOI: 10.1021/Pr050473A |
0.633 |
|
2005 |
Tsur D, Tanner S, Zandi E, Bafna V, Pevzner PA. Identification of post-translational modifications via blind search of mass-spectra. Proceedings / Ieee Computational Systems Bioinformatics Conference, Csb. Ieee Computational Systems Bioinformatics Conference. 157-66. PMID 16447973 DOI: 10.1109/CSB.2005.34 |
0.7 |
|
2005 |
Tsur D, Tanner S, Zandi E, Bafna V, Pevzner PA. Identification of post-translational modifications by blind search of mass spectra. Nature Biotechnology. 23: 1562-7. PMID 16311586 DOI: 10.1038/Nbt1168 |
0.734 |
|
2005 |
Frank A, Tanner S, Bafna V, Pevzner P. Peptide sequence tags for fast database search in mass-spectrometry. Journal of Proteome Research. 4: 1287-95. PMID 16083278 DOI: 10.1021/Pr050011X |
0.733 |
|
2005 |
Tanner S, Shu H, Frank A, Wang LC, Zandi E, Mumby M, Pevzner PA, Bafna V. InsPecT: identification of posttranslationally modified peptides from tandem mass spectra. Analytical Chemistry. 77: 4626-39. PMID 16013882 DOI: 10.1021/Ac050102D |
0.719 |
|
Show low-probability matches. |