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Sharon L. Amacher - Publications

Affiliations: 
Molecular & Cell Biology University of California, Berkeley, Berkeley, CA, United States 
Area:
Genetics
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52 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Blatnik MC, Gallagher TL, Amacher SL. Keeping development on time: Insights into post-transcriptional mechanisms driving oscillatory gene expression during vertebrate segmentation. Wiley Interdisciplinary Reviews. Rna. e1751. PMID 35851751 DOI: 10.1002/wrna.1751  0.304
2022 Hsu JY, Danis EP, Nance S, O'Brien JH, Gustafson AL, Wessells VM, Goodspeed AE, Talbot JC, Amacher SL, Jedlicka P, Black JC, Costello JC, Durbin AD, Artinger KB, Ford HL. SIX1 reprograms myogenic transcription factors to maintain the rhabdomyosarcoma undifferentiated state. Cell Reports. 38: 110323. PMID 35108532 DOI: 10.1016/j.celrep.2022.110323  0.679
2020 Chong JX, Talbot JC, Teets EM, Previs S, Martin BL, Shively KM, Marvin CT, Aylsworth AS, Saadeh-Haddad R, Schatz UA, Inzana F, Ben-Omran T, Almusafri F, Al-Mulla M, Buckingham KJ, ... ... Amacher SL, et al. Response to Hall et al. American Journal of Human Genetics. 107: 1188-1189. PMID 33275912 DOI: 10.1016/j.ajhg.2020.11.006  0.529
2020 Chong JX, Talbot JC, Teets EM, Previs S, Martin BL, Shively KM, Marvin CT, Aylsworth AS, Saadeh-Haddad R, Schatz UA, Inzana F, Ben-Omran T, Almusafri F, Al-Mulla M, Buckingham KJ, ... ... Amacher SL, et al. Mutations in MYLPF Cause a Novel Segmental Amyoplasia that Manifests as Distal Arthrogryposis. American Journal of Human Genetics. PMID 32707087 DOI: 10.1016/J.Ajhg.2020.06.014  0.649
2020 Gangras P, Gallagher TL, Parthun MA, Yi Z, Patton RD, Tietz KT, Deans NC, Bundschuh R, Amacher SL, Singh G. Zebrafish rbm8a and magoh mutants reveal EJC developmental functions and new 3'UTR intron-containing NMD targets. Plos Genetics. 16: e1008830. PMID 32502192 DOI: 10.1371/Journal.Pgen.1008830  0.498
2020 Tietz KT, Gallagher TL, Mannings MC, Morrow ZT, Derr NL, Amacher SL. Pumilio response and AU-rich elements drive rapid decay of Pnrc2-regulated cyclic gene transcripts. Developmental Biology. PMID 32246943 DOI: 10.1016/J.Ydbio.2020.03.017  0.472
2020 Hromowyk KJ, Talbot JC, Martin BL, Janssen PML, Amacher SL. Cell fusion is differentially regulated in zebrafish post-embryonic slow and fast muscle. Developmental Biology. PMID 32165147 DOI: 10.1016/J.Ydbio.2020.03.005  0.674
2019 Talbot JC, Teets EM, Ratnayake D, Duy PQ, Currie PD, Amacher SL. Muscle precursor cell movements in zebrafish are dynamic and require family genes. Development (Cambridge, England). PMID 31023879 DOI: 10.1242/Dev.171421  0.669
2017 Stainier DYR, Raz E, Lawson ND, Ekker SC, Burdine RD, Eisen JS, Ingham PW, Schulte-Merker S, Yelon D, Weinstein BM, Mullins MC, Wilson SW, Ramakrishnan L, Amacher SL, Neuhauss SCF, et al. Guidelines for morpholino use in zebrafish. Plos Genetics. 13: e1007000. PMID 29049395 DOI: 10.1371/Journal.Pgen.1007000  0.444
2017 Morrow ZT, Maxwell AM, Hoshijima K, Talbot JC, Grunwald DJ, Amacher SL. tbx6l and tbx16 are redundantly required for posterior paraxial mesoderm formation during zebrafish embryogenesis. Developmental Dynamics : An Official Publication of the American Association of Anatomists. PMID 28691257 DOI: 10.1002/Dvdy.24547  0.715
2017 Gallagher TL, Tietz KT, Morrow ZT, McCammon JM, Goldrich ML, Derr NL, Amacher SL. Pnrc2 regulates 3'UTR-mediated decay of segmentation clock-associated transcripts during zebrafish segmentation. Developmental Biology. PMID 28648842 DOI: 10.1016/J.Ydbio.2017.06.024  0.796
2017 Berberoglu MA, Gallagher TL, Morrow ZT, Talbot JC, Hromowyk KJ, Tenente IM, Langenau DM, Amacher SL. Satellite-like cells contribute to pax7-dependent skeletal muscle repair in adult zebrafish. Developmental Biology. PMID 28279710 DOI: 10.1016/J.Ydbio.2017.03.004  0.673
2017 Li M, Hromowyk KJ, Amacher SL, Currie PD. Muscular dystrophy modeling in zebrafish. Methods in Cell Biology. 138: 347-380. PMID 28129852 DOI: 10.1016/Bs.Mcb.2016.11.004  0.36
2016 Nissim S, Weeksb O, Talbot JC, Hedgepeth JW, Wucherpfennig J, Schatzman-Bone S, Swinburne I, Cortes M, Alexa K, Megason S, North TE, Amacher SL, Goessling W. Iterative use of nuclear receptor Nr5a2 regulates multiple stages of liver and pancreas development. Developmental Biology. PMID 27474396 DOI: 10.1016/J.Ydbio.2016.07.019  0.636
2016 Talbot JC, Nichols JT, Yan YL, Leonard IF, BreMiller RA, Amacher SL, Postlethwait JH, Kimmel CB. Pharyngeal morphogenesis requires fras1-itga8- dependent epithelial-mesenchymal interaction. Developmental Biology. PMID 27265864 DOI: 10.1016/J.Ydbio.2016.05.035  0.755
2015 Martin BL, Gallagher TL, Rastogi N, Davis JP, Beattie CE, Amacher SL, Janssen PM. In vivo assessment of contractile strength distinguishes differential gene function in skeletal muscle of zebrafish larvae. Journal of Applied Physiology (Bethesda, Md. : 1985). jap.00447.2015. PMID 26251513 DOI: 10.1152/Japplphysiol.00447.2015  0.38
2015 Shih NP, François P, Delaune EA, Amacher SL. Dynamics of the slowing segmentation clock reveal alternating two-segment periodicity. Development (Cambridge, England). 142: 1785-93. PMID 25968314 DOI: 10.1242/Dev.119057  0.303
2015 Martin BL, Gallagher TL, Rastogi N, Beattie CE, Amacher SL, Janssen PM. Direct Assessment of Skeletal Muscle Contractile Strength in Live Wildtype and Rbfox Morphant Zebrafish Larvae Biophysical Journal. 108: 589a. DOI: 10.1016/J.Bpj.2014.11.3209  0.356
2014 Talbot JC, Amacher SL. A streamlined CRISPR pipeline to reliably generate zebrafish frameshifting alleles. Zebrafish. 11: 583-5. PMID 25470533 DOI: 10.1089/Zeb.2014.1047  0.671
2012 Fior R, Maxwell AA, Ma TP, Vezzaro A, Moens CB, Amacher SL, Lewis J, Saúde L. The differentiation and movement of presomitic mesoderm progenitor cells are controlled by Mesogenin 1. Development (Cambridge, England). 139: 4656-65. PMID 23172917 DOI: 10.1242/Dev.078923  0.776
2012 Delaune EA, François P, Shih NP, Amacher SL. Single-cell-resolution imaging of the impact of Notch signaling and mitosis on segmentation clock dynamics. Developmental Cell. 23: 995-1005. PMID 23153496 DOI: 10.1016/J.Devcel.2012.09.009  0.312
2012 Parra MK, Gallagher TL, Amacher SL, Mohandas N, Conboy JG. Deep intron elements mediate nested splicing events at consecutive AG dinucleotides to regulate alternative 3' splice site choice in vertebrate 4.1 genes. Molecular and Cellular Biology. 32: 2044-53. PMID 22473990 DOI: 10.1128/Mcb.05716-11  0.355
2011 Gallagher TL, Arribere JA, Geurts PA, Exner CR, McDonald KL, Dill KK, Marr HL, Adkar SS, Garnett AT, Amacher SL, Conboy JG. Rbfox-regulated alternative splicing is critical for zebrafish cardiac and skeletal muscle functions. Developmental Biology. 359: 251-61. PMID 21925157 DOI: 10.1016/J.Ydbio.2011.08.025  0.793
2011 McCammon JM, Doyon Y, Amacher SL. Inducing high rates of targeted mutagenesis in zebrafish using zinc finger nucleases (ZFNs). Methods in Molecular Biology (Clifton, N.J.). 770: 505-27. PMID 21805278 DOI: 10.1007/978-1-61779-210-6_20  0.79
2011 Dehnert KW, Beahm BJ, Huynh TT, Baskin JM, Laughlin ST, Wang W, Wu P, Amacher SL, Bertozzi CR. Metabolic labeling of fucosylated glycans in developing zebrafish. Acs Chemical Biology. 6: 547-52. PMID 21425872 DOI: 10.1021/Cb100284D  0.307
2010 McCammon JM, Amacher SL. Using zinc finger nucleases for efficient and heritable gene disruption in zebrafish. Methods in Molecular Biology (Clifton, N.J.). 649: 281-98. PMID 20680842 DOI: 10.1007/978-1-60761-753-2_18  0.779
2010 Gallagher TL, Arribere J, Adkar S, Marr H, Dill K, Garnett A, Amacher S, Conboy J. Fox1 and Fox4 regulate muscle-specific splicing in zebrafish and are required for cardiac and skeletal muscle functions Developmental Biology. 344: 491-492. DOI: 10.1016/J.Ydbio.2010.05.432  0.77
2010 Maxwell AA, Ma T, Moens C, Amacher SL. Identifying and characterizing downstream targets of T-box transcription factors Developmental Biology. 344: 460-461. DOI: 10.1016/J.Ydbio.2010.05.194  0.767
2009 Garnett AT, Han TM, Gilchrist MJ, Smith JC, Eisen MB, Wardle FC, Amacher SL. Identification of direct T-box target genes in the developing zebrafish mesoderm. Development (Cambridge, England). 136: 749-60. PMID 19158186 DOI: 10.1242/Dev.024703  0.456
2009 McCammon JM, Goldrich M, Glazer A, Amacher SL. Using zinc finger nucleases for targeted modification of the zebrafish genome Developmental Biology. 331: 434. DOI: 10.1016/J.Ydbio.2009.05.172  0.753
2009 Maxwell A, Garnett AT, Amacher SL. Identification and characterization of T-box transcription factor downstream targets Developmental Biology. 331: 429-430. DOI: 10.1016/J.Ydbio.2009.05.155  0.766
2008 Amacher SL. Emerging gene knockout technology in zebrafish: zinc-finger nucleases. Briefings in Functional Genomics & Proteomics. 7: 460-4. PMID 19109309 DOI: 10.1093/Bfgp/Eln043  0.425
2008 Doyon Y, McCammon JM, Miller JC, Faraji F, Ngo C, Katibah GE, Amora R, Hocking TD, Zhang L, Rebar EJ, Gregory PD, Urnov FD, Amacher SL. Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases. Nature Biotechnology. 26: 702-8. PMID 18500334 DOI: 10.1038/Nbt1409  0.796
2008 Laughlin ST, Baskin JM, Amacher SL, Bertozzi CR. In vivo imaging of membrane-associated glycans in developing zebrafish. Science (New York, N.Y.). 320: 664-7. PMID 18451302 DOI: 10.1126/Science.1155106  0.323
2008 Ouyang M, Garnett AT, Han TM, Hama K, Lee A, Deng Y, Lee N, Liu HY, Amacher SL, Farber SA, Ho SY. A web based resource characterizing the zebrafish developmental profile of over 16,000 transcripts. Gene Expression Patterns : Gep. 8: 171-80. PMID 18068546 DOI: 10.1016/J.Gep.2007.10.011  0.372
2007 Daggett DF, Domingo CR, Currie PD, Amacher SL. Control of morphogenetic cell movements in the early zebrafish myotome. Developmental Biology. 309: 169-79. PMID 17689522 DOI: 10.1016/J.Ydbio.2007.06.008  0.401
2007 Brown KS, Gurling MA, Amacher SL. A cell cycle regulatory gene contributes to zebrafish somitogenesis Developmental Biology. 306: 438. DOI: 10.1016/J.Ydbio.2007.03.484  0.382
2007 Garnett AT, Han TM, Eisen MB, Amacher SL. T-box transcription factors in Zebrafish mesoderm development Developmental Biology. 306: 348. DOI: 10.1016/J.Ydbio.2007.03.209  0.389
2007 McCammon JM, Goldrich ML, Dill K, Amacher SL. Molecular cloning of zebrafish tortuga: Insights into cyclic transcript regulation Developmental Biology. 306: 348. DOI: 10.1016/J.Ydbio.2007.03.208  0.742
2005 Dill KK, Amacher SL. tortuga refines Notch pathway gene expression in the zebrafish presomitic mesoderm at the post-transcriptional level. Developmental Biology. 287: 225-36. PMID 16236276 DOI: 10.1016/J.Ydbio.2005.07.032  0.805
2005 Henry CA, McNulty IM, Durst WA, Munchel SE, Amacher SL. Interactions between muscle fibers and segment boundaries in zebrafish. Developmental Biology. 287: 346-60. PMID 16225858 DOI: 10.1016/J.Ydbio.2005.08.049  0.374
2005 Gardiner MR, Daggett DF, Amacher SL, Currie PD, Zon LI, Perkins AC. Zebrafish KLF4 is essential for hatching and haematopoiesis Developmental Biology. 283: 619-619. DOI: 10.1016/J.Ydbio.2005.04.040  0.377
2004 Henry CA, Amacher SL. Zebrafish slow muscle cell migration induces a wave of fast muscle morphogenesis. Developmental Cell. 7: 917-23. PMID 15572133 DOI: 10.1016/J.Devcel.2004.09.017  0.348
2004 Daggett DF, Boyd CA, Gautier P, Bryson-Richardson RJ, Thisse C, Thisse B, Amacher SL, Currie PD. Developmentally restricted actin-regulatory molecules control morphogenetic cell movements in the zebrafish gastrula. Current Biology : Cb. 14: 1632-8. PMID 15380064 DOI: 10.1016/J.Cub.2004.08.024  0.404
2002 Henry CA, Urban MK, Dill KK, Merlie JP, Page MF, Kimmel CB, Amacher SL. Two linked hairy/Enhancer of split-related zebrafish genes, her1 and her7, function together to refine alternating somite boundaries. Development (Cambridge, England). 129: 3693-704. PMID 12117818  0.779
2002 Amacher SL, Draper BW, Summers BR, Kimmel CB. The zebrafish T-box genes no tail and spadetail are required for development of trunk and tail mesoderm and medial floor plate. Development (Cambridge, England). 129: 3311-23. PMID 12091302  0.624
2001 Gray M, Moens CB, Amacher SL, Eisen JS, Beattie CE. Zebrafish deadly seven functions in neurogenesis. Developmental Biology. 237: 306-23. PMID 11543616 DOI: 10.1006/Dbio.2001.0381  0.517
1999 Amacher SL. Transcriptional regulation during zebrafish embryogenesis Current Opinion in Genetics and Development. 9: 548-552. PMID 10508700 DOI: 10.1016/S0959-437X(99)00017-9  0.456
1998 Yamamoto A, Amacher SL, Kim SH, Geissert D, Kimmel CB, De Robertis EM. Zebrafish paraxial protocadherin is a downstream target of spadetail involved in morphogenesis of gastrula mesoderm. Development (Cambridge, England). 125: 3389-97. PMID 9693142  0.639
1998 Griffin KJ, Amacher SL, Kimmel CB, Kimelman D. Molecular identification of spadetail: regulation of zebrafish trunk and tail mesoderm formation by T-box genes. Development (Cambridge, England). 125: 3379-88. PMID 9693141  0.634
1998 Amacher SL, Kimmel CB. Promoting notochord fate and repressing muscle development in zebrafish axial mesoderm. Development (Cambridge, England). 125: 1397-406. PMID 9502721  0.623
1997 Halpern ME, Hatta K, Amacher SL, Talbot WS, Yan YL, Thisse B, Thisse C, Postlethwait JH, Kimmel CB. Genetic interactions in zebrafish midline development. Developmental Biology. 187: 154-70. PMID 9242414 DOI: 10.1006/Dbio.1997.8605  0.627
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