Marcelo O. Magnasco - Publications

Affiliations: 
Rockefeller University, New York, NY, United States 
Area:
Theoretical Neuroscience
Website:
http://asterion.rockefeller.edu/marcelo/marcelo.html

82 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Alonso LM, Solovey G, Yanagawa T, Proekt A, Cecchi GA, Magnasco MO. Author Correction: Single-trial classification of awareness state during anesthesia by measuring critical dynamics of global brain activity. Scientific Reports. 9: 18643. PMID 31796884 DOI: 10.1038/s41598-019-55180-0  1
2019 Alonso LM, Solovey G, Yanagawa T, Proekt A, Cecchi GA, Magnasco MO. Single-trial classification of awareness state during anesthesia by measuring critical dynamics of global brain activity. Scientific Reports. 9: 4927. PMID 30894626 DOI: 10.1038/s41598-019-41345-4  1
2018 Alonso LM, Magnasco MO. Complex spatiotemporal behavior and coherent excitations in critically-coupled chains of neural circuits. Chaos (Woodbury, N.Y.). 28: 093102. PMID 30278628 DOI: 10.1063/1.5011766  1
2015 Blackwell JM, Taillefumier TO, Natan RG, Carruthers IM, Magnasco MO, Geffen MN. Stable encoding of sounds over a broad range of statistical parameters in the auditory cortex. The European Journal of Neuroscience. PMID 26663571 DOI: 10.1111/ejn.13144  1
2015 Gräwer J, Modes CD, Magnasco MO, Katifori E. Structural self-assembly and avalanchelike dynamics in locally adaptive networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 92: 012801. PMID 26274219  1
2015 Solovey G, Alonso LM, Yanagawa T, Fujii N, Magnasco MO, Cecchi GA, Proekt A. Loss of Consciousness Is Associated with Stabilization of Cortical Activity. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 10866-77. PMID 26224868 DOI: 10.1523/JNEUROSCI.4895-14.2015  1
2015 Gräwer J, Modes CD, Magnasco MO, Katifori E. Structural self-assembly and avalanchelike dynamics in locally adaptive networks Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 92. DOI: 10.1103/PhysRevE.92.012801  1
2015 D’Onofrio G, Pirozzi E, Magnasco MO. Towards stochastic modeling of neuronal interspike intervals including a time-varying input signal Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 9520: 166-173. DOI: 10.1007/978-3-319-27340-2_22  1
2014 Alonso LM, Proekt A, Schwartz TH, Pryor KO, Cecchi GA, Magnasco MO. Dynamical criticality during induction of anesthesia in human ECoG recordings. Frontiers in Neural Circuits. 8: 20. PMID 24723852 DOI: 10.3389/fncir.2014.00020  1
2014 Bushdid C, Magnasco MO, Vosshall LB, Keller A. Humans can discriminate more than 1 trillion olfactory stimuli. Science (New York, N.Y.). 343: 1370-2. PMID 24653035 DOI: 10.1126/science.1249168  1
2013 Oppenheim JN, Magnasco MO. Human time-frequency acuity beats the Fourier uncertainty principle. Physical Review Letters. 110: 044301. PMID 25166166 DOI: 10.1103/PhysRevLett.110.044301  1
2013 Oppenheim JN, Isakov P, Magnasco MO. Degraded time-frequency acuity to time-reversed notes. Plos One. 8: e65386. PMID 23799012 DOI: 10.1371/journal.pone.0065386  1
2013 Taillefumier T, Magnasco MO. A phase transition in the first passage of a Brownian process through a fluctuating boundary with implications for neural coding. Proceedings of the National Academy of Sciences of the United States of America. 110: E1438-43. PMID 23536302 DOI: 10.1073/pnas.1212479110  1
2012 Oppenheim JN, Magnasco MO. Topological phase transition in the Scheidegger model of river networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 86: 021134. PMID 23005749 DOI: 10.1103/PhysRevE.86.021134  1
2012 Yan XH, Magnasco MO. Input-dependent wave attenuation in a critically-balanced model of cortex. Plos One. 7: e41419. PMID 22848489 DOI: 10.1371/journal.pone.0041419  1
2012 Solovey G, Miller KJ, Ojemann JG, Magnasco MO, Cecchi GA. Self-Regulated Dynamical Criticality in Human ECoG. Frontiers in Integrative Neuroscience. 6: 44. PMID 22833717 DOI: 10.3389/fnint.2012.00044  1
2012 Andor-Ardó D, Keen EC, Hudspeth AJ, Magnasco MO. Fast, automated implementation of temporally precise blind deconvolution of multiphasic excitatory postsynaptic currents. Plos One. 7: e38198. PMID 22761670 DOI: 10.1371/journal.pone.0038198  1
2012 Katifori E, Magnasco MO. Quantifying loopy network architectures. Plos One. 7: e37994. PMID 22701593 DOI: 10.1371/journal.pone.0037994  1
2011 Geffen MN, Gervain J, Werker JF, Magnasco MO. Auditory perception of self-similarity in water sounds. Frontiers in Integrative Neuroscience. 5: 15. PMID 21617734 DOI: 10.3389/fnint.2011.00015  1
2010 Dubbs AJ, Seiler BA, Magnasco MO. A fast L(p) spike alignment metric. Neural Computation. 22: 2785-808. PMID 20804383 DOI: 10.1162/NECO_a_00026  1
2010 Gelfand M, Piro O, Magnasco MO, Hudspeth AJ. Interactions between hair cells shape spontaneous otoacoustic emissions in a model of the tokay gecko's cochlea. Plos One. 5: e11116. PMID 20559557 DOI: 10.1371/journal.pone.0011116  1
2010 Zilman A, Di Talia S, Jovanovic-Talisman T, Chait BT, Rout MP, Magnasco MO. Enhancement of transport selectivity through nano-channels by non-specific competition. Plos Computational Biology. 6: e1000804. PMID 20548778 DOI: 10.1371/journal.pcbi.1000804  1
2010 Katifori E, Szöllosi GJ, Magnasco MO. Damage and fluctuations induce loops in optimal transport networks. Physical Review Letters. 104: 048704. PMID 20366746 DOI: 10.1103/PhysRevLett.104.048704  1
2010 Andor-Ardó D, Hudspeth AJ, Magnasco MO, Piro O. Modeling the resonant release of synaptic transmitter by hair cells as an example of biological oscillators with cooperative steps. Proceedings of the National Academy of Sciences of the United States of America. 107: 2019-24. PMID 20080698 DOI: 10.1073/pnas.0914372107  1
2010 Taillefumier T, Magnasco MO. A Fast Algorithm for the First-Passage Times of Gauss-Markov Processes with Hölder Continuous Boundaries Journal of Statistical Physics. 140: 1130-1156. DOI: 10.1007/s10955-010-0033-6  1
2009 Magnasco MO, Piro O, Cecchi GA. Self-tuned critical anti-Hebbian networks. Physical Review Letters. 102: 258102. PMID 19659122 DOI: 10.1103/PhysRevLett.102.258102  1
2008 Tkacik G, Magnasco MO. Decoding spike timing: the differential reverse-correlation method. Bio Systems. 93: 90-100. PMID 18597928 DOI: 10.1016/j.biosystems.2008.04.011  1
2008 Baikouzis C, Magnasco MO. Is an eclipse described in the Odyssey? Proceedings of the National Academy of Sciences of the United States of America. 105: 8823-8. PMID 18577587 DOI: 10.1073/pnas.0803317105  1
2008 Taillefumier T, Magnasco MO. A Haar-like construction for the Ornstein Uhlenbeck process Journal of Statistical Physics. 132: 397-415. DOI: 10.1007/s10955-008-9545-8  1
2007 Suárez-Fariñas M, Magnasco MO. Comparing microarray studies. Methods in Molecular Biology (Clifton, N.J.). 377: 139-52. PMID 17634614 DOI: 10.1007/978-1-59745-390-5_8  1
2007 Rao AR, Cecchi GA, Magnasco M. High performance computing environment for multidimensional image analysis. Bmc Cell Biology. 8: S9. PMID 17634099 DOI: 10.1186/1471-2121-8-S1-S9  1
2007 Zilman A, Di Talia S, Chait BT, Rout MP, Magnasco MO. Efficiency, selectivity, and robustness of nucleocytoplasmic transport. Plos Computational Biology. 3: e125. PMID 17630825 DOI: 10.1371/journal.pcbi.0030125  1
2007 Bohn S, Magnasco MO. Structure, scaling, and phase transition in the optimal transport network. Physical Review Letters. 98: 088702. PMID 17359138 DOI: 10.1103/PhysRevLett.98.088702  1
2006 Pellegrino M, Suárez-Fariñas M, Magnasco MO, Wittkowski KM. Detecting artifacts on SNP chips. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 1: 4100-2. PMID 17947067 DOI: 10.1109/IEMBS.2006.260753  1
2006 Gardner TJ, Magnasco MO. Sparse time-frequency representations. Proceedings of the National Academy of Sciences of the United States of America. 103: 6094-9. PMID 16601097 DOI: 10.1073/pnas.0601707103  1
2006 Lim DA, Suárez-Fariñas M, Naef F, Hacker CR, Menn B, Takebayashi H, Magnasco M, Patil N, Alvarez-Buylla A. In vivo transcriptional profile analysis reveals RNA splicing and chromatin remodeling as prominent processes for adult neurogenesis. Molecular and Cellular Neurosciences. 31: 131-48. PMID 16330219 DOI: 10.1016/j.mcn.2005.10.005  1
2006 Naef F, Wijnen H, Magnasco M. Reply to "comment on 'Solving the riddle of the bright mismatches: Labeling and effective binding in oligonucleotide arrays'" Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 73. DOI: 10.1103/PhysRevE.73.063902  1
2005 Suárez-Fariñas M, Pellegrino M, Wittkowski KM, Magnasco MO. Harshlight: a "corrective make-up" program for microarray chips. Bmc Bioinformatics. 6: 294. PMID 16336691 DOI: 10.1186/1471-2105-6-294  1
2005 Suárez-Fariñas M, Noggle S, Heke M, Hemmati-Brivanlou A, Magnasco MO. Comparing independent microarray studies: the case of human embryonic stem cells. Bmc Genomics. 6: 99. PMID 16042783 DOI: 10.1186/1471-2164-6-99  1
2005 Gardner TJ, Magnasco MO. Instantaneous frequency decomposition: an application to spectrally sparse sounds with fast frequency modulations. The Journal of the Acoustical Society of America. 117: 2896-903. PMID 15957760 DOI: 10.1121/1.1863072  1
2005 Cecchi GA, Magnasco MO. Computational models of adult neurogenesis Physica a: Statistical Mechanics and Its Applications. 356: 43-47. DOI: 10.1016/j.physa.2005.05.010  1
2003 Rout MP, Aitchison JD, Magnasco MO, Chait BT. Virtual gating and nuclear transport: the hole picture. Trends in Cell Biology. 13: 622-8. PMID 14624840 DOI: 10.1016/j.tcb.2003.10.007  1
2003 Asmal M, Colgan J, Naef F, Yu B, Lee Y, Magnasco M, Luban J. Production of ribosome components in effector CD4+ T cells is accelerated by TCR stimulation and coordinated by ERK-MAPK. Immunity. 19: 535-48. PMID 14563318 DOI: 10.1016/S1074-7613(03)00268-1  1
2003 Cartwright JH, Magnasco MO, Piro O, Tuval I. Bubbling and on-off intermittency in bailout embeddings. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 68: 016217. PMID 12935235  1
2003 Naef F, Magnasco MO. Solving the riddle of the bright mismatches: labeling and effective binding in oligonucleotide arrays. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 68: 011906. PMID 12935175  1
2003 Yang E, van Nimwegen E, Zavolan M, Rajewsky N, Schroeder M, Magnasco M, Darnell JE. Decay rates of human mRNAs: correlation with functional characteristics and sequence attributes. Genome Research. 13: 1863-72. PMID 12902380 DOI: 10.1101/gr.1272403  1
2003 Hekstra D, Taussig AR, Magnasco M, Naef F. Absolute mRNA concentrations from sequence-specific calibration of oligonucleotide arrays. Nucleic Acids Research. 31: 1962-8. PMID 12655013 DOI: 10.1093/nar/gkg283  1
2003 Magnasco MO. A wave traveling over a Hopf instability shapes the cochlear tuning curve. Physical Review Letters. 90: 058101. PMID 12633400  1
2003 Naef F, Socci ND, Magnasco M. A study of accuracy and precision in oligonucleotide arrays: extracting more signal at large concentrations. Bioinformatics (Oxford, England). 19: 178-84. PMID 12538237 DOI: 10.1093/bioinformatics/19.2.178  1
2002 Cartwright JH, Magnasco MO, Piro O. Noise- and inertia-induced inhomogeneity in the distribution of small particles in fluid flows. Chaos (Woodbury, N.Y.). 12: 489-495. PMID 12779579 DOI: 10.1063/1.1480441  1
2002 Cartwright JH, Magnasco MO, Piro O, Tuval I. Bailout embeddings and neutrally buoyant particles in three-dimensional flows. Physical Review Letters. 89: 264501. PMID 12484826  1
2002 Cartwright JH, Magnasco MO, Piro O. Bailout embeddings, targeting of invariant tori, and the control of Hamiltonian chaos. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 65: 045203. PMID 12005907 DOI: 10.1103/PhysRevE.65.045203  1
2002 Naef F, Lim DA, Patil N, Magnasco M. DNA hybridization to mismatched templates: a chip study. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 65: 040902. PMID 12005798  1
2002 Naef F, Hacker CR, Patil N, Magnasco M. Empirical characterization of the expression ratio noise structure in high-density oligonucleotide arrays. Genome Biology. 3: RESEARCH0018. PMID 11983059  1
2002 Naef F, Hacker CR, Patil N, Magnasco M. Characterization of the expression ratio noise structure in high-density oligonucleotide arrays. Genome Biology. 3: PREPRINT0001. PMID 11806820  1
2002 Naef F, Lim DA, Patil N, Magnasco M. DNA hybridization to mismatched templates: A chip study Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 65: 040902/1-040902/4. DOI: 10.1103/PhysRevE.65.040902  1
2002 Cartwright JHE, Magnasco MO, Piro O, Tuval I. Bailout embeddings and neutrally bouyant particles in three-dimensional flows Physical Review Letters. 89: 264501/1-264501/4.  1
2001 Cecchi GA, Petreanu LT, Alvarez-Buylla A, Magnasco MO. Unsupervised learning and adaptation in a model of adult neurogenesis. Journal of Computational Neuroscience. 11: 175-82. PMID 11717533 DOI: 10.1023/A:1012849801892  1
2001 Gardner T, Cecchi G, Magnasco M, Laje R, Mindlin GB. Simple motor gestures for birdsongs. Physical Review Letters. 87: 208101. PMID 11690514  1
2001 Ospeck M, Eguíluz VM, Magnasco MO. Evidence of a Hopf bifurcation in frog hair cells. Biophysical Journal. 80: 2597-607. PMID 11371437 DOI: 10.1016/S0006-3495(01)76230-3  1
2001 Yan J, Magnasco MO, Marko JF. Kinetic proofreading can explain the supression of supercoiling of circular DNA molecules by type-II topoisomerases. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 63: 031909. PMID 11308680  1
2001 Sigman M, Cecchi GA, Gilbert CD, Magnasco MO. On a common circle: natural scenes and Gestalt rules. Proceedings of the National Academy of Sciences of the United States of America. 98: 1935-40. PMID 11172054 DOI: 10.1073/pnas.031571498  1
2000 Chialvo DR, Cecchi GA, Magnasco MO. Noise-induced memory in extended excitable systems. Physical Review. E, Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 61: 5654-7. PMID 11031622  1
2000 Eguíluz VM, Ospeck M, Choe Y, Hudspeth AJ, Magnasco MO. Essential nonlinearities in hearing. Physical Review Letters. 84: 5232-5. PMID 10990910  1
2000 Cecchi GA, Sigman M, Alonso JM, Martínez L, Chialvo DR, Magnasco MO. Noise in neurons is message dependent. Proceedings of the National Academy of Sciences of the United States of America. 97: 5557-61. PMID 10792057 DOI: 10.1073/pnas.100113597  1
1999 Cecchi GA, Ribeiro S, Mello CV, Magnasco MO. An automated system for the mapping and quantitative analysis of immunocytochemistry of an inducible nuclear protein. Journal of Neuroscience Methods. 87: 147-58. PMID 11230811 DOI: 10.1016/S0165-0270(98)00179-4  1
1999 Yan J, Magnasco MO, Marko JF. A kinetic proofreading mechanism for disentanglement of DNA by topoisomerases. Nature. 401: 932-5. PMID 10553912 DOI: 10.1038/44872  1
1999 Field D, Magnasco MO, Moxon ER, Metzgar D, Tanaka MM, Wills C, Thaler DS. Contingency loci, mutator alleles, and their interactions. Synergistic strategies for microbial evolution and adaptation in pathogenesis. Annals of the New York Academy of Sciences. 870: 378-82. PMID 10415502 DOI: 10.1111/j.1749-6632.1999.tb08907.x  1
1998 Choe Y, Magnasco MO, Hudspeth AJ. A model for amplification of hair-bundle motion by cyclical binding of Ca2+ to mechanoelectrical-transduction channels. Proceedings of the National Academy of Sciences of the United States of America. 95: 15321-6. PMID 9860967 DOI: 10.1073/pnas.95.26.15321  1
1998 Ribeiro S, Cecchi GA, Magnasco MO, Mello CV. Toward a song code: evidence for a syllabic representation in the canary brain. Neuron. 21: 359-71. PMID 9728917  1
1998 Magnasco MO, Stolovitzky G. Feynman's ratchet and pawl Journal of Statistical Physics. 93: 615-632.  1
1997 Magnasco MO. Chemical kinetics is turing universal Physical Review Letters. 78: 1190-1193.  1
1996 Cecchi GA, Magnasco MO. Negative resistance and rectification in Brownian transport. Physical Review Letters. 76: 1968-1971. PMID 10060566  1
1996 Magnasco MO, Thaler DS. Changing the pace of evolution Physics Letters, Section a: General, Atomic and Solid State Physics. 221: 287-292. DOI: 10.1016/0375-9601(96)00599-3  1
1995 Bourdieu L, Magnasco MO, Winkelmann DA, Libchaber A. Actin filaments on myosin beds: The velocity distribution. Physical Review. E, Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 52: 6573-6579. PMID 9964174 DOI: 10.1103/PhysRevE.52.6573  1
1994 Magnasco MO. Molecular combustion motors. Physical Review Letters. 72: 2656-2659. PMID 10055939 DOI: 10.1103/PhysRevLett.72.2656  1
1993 Cecchi GA, Gonzalez DL, Magnasco MO, Mindlin GB, Piro O, Santillan AJ. Periodically kicked hard oscillators. Chaos (Woodbury, N.Y.). 3: 51-62. PMID 12780014 DOI: 10.1063/1.165978  1
1993 Magnasco MO. Forced thermal ratchets. Physical Review Letters. 71: 1477-1481. PMID 10054418 DOI: 10.1103/PhysRevLett.71.1477  1
1993 Ott A, Magnasco M, Simon A, Libchaber A. Measurement of the persistence length of polymerized actin using fluorescence microscopy Physical Review E. 48: R1642-R1645. DOI: 10.1103/PhysRevE.48.R1642  1
1991 Flesselles JM, Magnasco MO, Libchaber A. From disks to hexagons and beyond: A study in two dimensions. Physical Review Letters. 67: 2489-2492. PMID 10044439 DOI: 10.1103/PhysRevLett.67.2489  1
1991 Feingold M, Gonzalez DL, Magnasco MO, Piro O. On the universality class dependence of period doubling indices Physics Letters A. 156: 272-276. DOI: 10.1016/0375-9601(91)90173-6  1
1989 Gonzalez DL, Magnasco MO, Mindlin GB, Larrondo HA, Romanelli L. A universal departure from the classical period doubling spectrum Physica D: Nonlinear Phenomena. 39: 111-123. DOI: 10.1016/0167-2789(89)90042-0  1
Show low-probability matches.