James S. Koopman - Publications

Affiliations: 
University of Michigan, Ann Arbor, Ann Arbor, MI 
Area:
Epidemiology

68 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Brouwer AF, Eisenberg MC, Shulman LM, Famulare M, Koopman JS, Kroiss SJ, Hindiyeh M, Manor Y, Grotto I, Eisenberg JNS. The role of time-varying viral shedding in modelling environmental surveillance for public health: revisiting the 2013 poliovirus outbreak in Israel. Journal of the Royal Society, Interface. 19: 20220006. PMID 35582812 DOI: 10.1098/rsif.2022.0006  0.336
2019 Vallejo C, Pearson CAB, Koopman J, Hladish TJ. Evaluating the probability of silent circulation of polio in small populations using the silent circulation statistic. Infectious Disease Modelling. 4: 239-250. PMID 31312777 DOI: 10.1016/J.Idm.2019.06.003  0.36
2018 Brouwer AF, Eisenberg JNS, Pomeroy CD, Shulman LM, Hindiyeh M, Manor Y, Grotto I, Koopman JS, Eisenberg MC. Epidemiology of the silent polio outbreak in Rahat, Israel, based on modeling of environmental surveillance data. Proceedings of the National Academy of Sciences of the United States of America. PMID 30337479 DOI: 10.1073/Pnas.1808798115  0.376
2018 Greene C, Ceron NH, Eisenberg MC, Koopman J, Miller JD, Xi C, Eisenberg JNS. Asymmetric transfer efficiencies between fomites and fingers: Impact on model parameterization. American Journal of Infection Control. PMID 29397229 DOI: 10.1016/J.Ajic.2017.12.002  0.359
2017 Vallejo C, Keesling J, Koopman J, Singer B. Silent circulation of poliovirus in small populations. Infectious Disease Modelling. 2: 431-440. PMID 30137721 DOI: 10.1016/J.Idm.2017.11.001  0.36
2017 Koopman JS, Henry CJ, Park JH, Eisenberg MC, Ionides EL, Eisenberg JN. Dynamics affecting the risk of silent circulation when oral polio vaccination is stopped. Epidemics. PMID 28283373 DOI: 10.1016/J.Epidem.2017.02.013  0.407
2015 Greene C, Vadlamudi G, Eisenberg M, Foxman B, Koopman J, Xi C. Fomite-fingerpad transfer efficiency (pick-up and deposit) of Acinetobacter baumannii-with and without a latex glove. American Journal of Infection Control. PMID 26141689 DOI: 10.1016/J.Ajic.2015.05.008  0.321
2015 Romero-Severson EO, Volz E, Koopman JS, Leitner T, Ionides EL. Dynamic Variation in Sexual Contact Rates in a Cohort of HIV-Negative Gay Men. American Journal of Epidemiology. 182: 255-62. PMID 25995288 DOI: 10.1093/Aje/Kwv044  0.677
2015 Henry CJ, Koopman JS. Strong influence of behavioral dynamics on the ability of testing and treating HIV to stop transmission. Scientific Reports. 5: 9467. PMID 25902018 DOI: 10.1038/Srep09467  0.413
2013 Plipat N, Spicknall IH, Koopman JS, Eisenberg JN. The dynamics of methicillin-resistant Staphylococcus aureus exposure in a hospital model and the potential for environmental intervention. Bmc Infectious Diseases. 13: 595. PMID 24341774 DOI: 10.1186/1471-2334-13-595  0.732
2013 Volz EM, Ionides E, Romero-Severson EO, Brandt MG, Mokotoff E, Koopman JS. HIV-1 transmission during early infection in men who have sex with men: a phylodynamic analysis. Plos Medicine. 10: e1001568; discussion. PMID 24339751 DOI: 10.1371/Journal.Pmed.1001568  0.729
2013 Romero-Severson EO, Alam SJ, Volz E, Koopman J. Acute-stage transmission of HIV: Effect of volatile contact rates Epidemiology. 24: 516-521. PMID 23689754 DOI: 10.1097/Ede.0B013E318294802E  0.708
2013 Mayer BT, Eisenberg JN, Henry CJ, Gomes MG, Ionides EL, Koopman JS. Successes and shortcomings of polio eradication: a transmission modeling analysis. American Journal of Epidemiology. 177: 1236-45. PMID 23592542 DOI: 10.1093/Aje/Kws378  0.374
2013 Alam SJ, Zhang X, Romero-Severson EO, Henry C, Zhong L, Volz EM, Brenner BG, Koopman JS. Detectable signals of episodic risk effects on acute HIV transmission: strategies for analyzing transmission systems using genetic data. Epidemics. 5: 44-55. PMID 23438430 DOI: 10.1016/J.Epidem.2012.11.003  0.719
2012 Zhang X, Zhong L, Romero-Severson E, Alam SJ, Henry CJ, Volz EM, Koopman JS. Episodic HIV Risk Behavior Can Greatly Amplify HIV Prevalence and the Fraction of Transmissions from Acute HIV Infection. Statistical Communications in Infectious Diseases. 4. PMID 24058722 DOI: 10.1515/1948-4690.1041  0.735
2012 Romero-Severson EO, Alam SJ, Volz EM, Koopman JS. Heterogeneity in Number and Type of Sexual Contacts in a Gay Urban Cohort. Statistical Communications in Infectious Diseases. 4. PMID 23638243 DOI: 10.1515/1948-4690.1042  0.675
2012 Zhao J, Eisenberg JE, Spicknall IH, Li S, Koopman JS. Model analysis of fomite mediated influenza transmission. Plos One. 7: e51984. PMID 23300585 DOI: 10.1371/Journal.Pone.0051984  0.697
2012 Volz EM, Koopman JS, Ward MJ, Brown AL, Frost SD. Simple epidemiological dynamics explain phylogenetic clustering of HIV from patients with recent infection. Plos Computational Biology. 8: e1002552. PMID 22761556 DOI: 10.1371/Journal.Pcbi.1002552  0.429
2012 Kim JH, Koopman JS. HIV transmissions by stage in dynamic sexual partnerships. Journal of Theoretical Biology. 298: 147-53. PMID 22261263 DOI: 10.1016/J.Jtbi.2011.12.021  0.561
2011 Mayer BT, Koopman JS, Ionides EL, Pujol JM, Eisenberg JN. A dynamic dose-response model to account for exposure patterns in risk assessment: a case study in inhalation anthrax. Journal of the Royal Society, Interface / the Royal Society. 8: 506-17. PMID 21068030 DOI: 10.1098/Rsif.2010.0491  0.323
2011 Spicknall I, Koopman J, Li S, Eisenberg J. Dominant Modes of Influenza Transmission: An Epidemiologic Perspective Epidemiology. 22: S50-S51. DOI: 10.1097/01.Ede.0000391817.27730.94  0.647
2010 Spicknall IH, Koopman JS, Nicas M, Pujol JM, Li S, Eisenberg JN. Informing optimal environmental influenza interventions: how the host, agent, and environment alter dominant routes of transmission. Plos Computational Biology. 6: e1000969. PMID 21060854 DOI: 10.1371/Journal.Pcbi.1000969  0.685
2010 Kretzschmar M, Gomes MG, Coutinho RA, Koopman JS. Unlocking pathogen genotyping information for public health by mathematical modeling. Trends in Microbiology. 18: 406-12. PMID 20638846 DOI: 10.1016/J.Tim.2010.06.008  0.334
2010 Alam SJ, Romero-Severson E, Kim JH, Emond G, Koopman JS. Dynamic sex roles among men who have sex with men and transmissions from primary HIV infection. Epidemiology (Cambridge, Mass.). 21: 669-75. PMID 20585251 DOI: 10.1097/Ede.0B013E3181E9E901  0.724
2010 Kim JH, Riolo RL, Koopman JS. HIV transmission by stage of infection and pattern of sexual partnerships. Epidemiology (Cambridge, Mass.). 21: 676-84. PMID 20571409 DOI: 10.1097/Ede.0B013E3181E6639F  0.546
2009 Pujol JM, Eisenberg JE, Haas CN, Koopman JS. The effect of ongoing exposure dynamics in dose response relationships. Plos Computational Biology. 5: e1000399. PMID 19503605 DOI: 10.1371/Journal.Pcbi.1000399  0.371
2009 Li S, Eisenberg JN, Spicknall IH, Koopman JS. Dynamics and control of infections transmitted from person to person through the environment. American Journal of Epidemiology. 170: 257-65. PMID 19474071 DOI: 10.1093/Aje/Kwp116  0.706
2007 Lin X, Koopman JS, Chick SE. Mathematical model comparisons of potential non-typeable Haemophilus influenzae vaccine effects. Journal of Theoretical Biology. 245: 66-76. PMID 17098258 DOI: 10.1016/J.Jtbi.2006.09.034  0.558
2005 Koopman JS. Infection transmission science and models. Japanese Journal of Infectious Diseases. 58: S3-8. PMID 16377860  0.39
2005 Riggs T, Koopman JS. Maximizing statistical power in group-randomized vaccine trials Epidemiology and Infection. 133: 993-1008. PMID 16274496 DOI: 10.1017/S095026880500436X  0.657
2005 Koopman JS, Simon CP, Riolo CP. When to control endemic infections by focusing on high-risk groups. Epidemiology (Cambridge, Mass.). 16: 621-7. PMID 16135937 DOI: 10.1097/01.Ede.0000172133.46385.18  0.368
2005 Jacobsen KH, Koopman JS. The effects of socioeconomic development on worldwide hepatitis A virus seroprevalence patterns. International Journal of Epidemiology. 34: 600-9. PMID 15831565 DOI: 10.1093/Ije/Dyi062  0.647
2004 Jacobsen KH, Koopman JS. Declining hepatitis A seroprevalence: a global review and analysis. Epidemiology and Infection. 132: 1005-22. PMID 15635957 DOI: 10.1017/S0950268804002857  0.584
2004 Riggs TW, Koopman JS. A stochastic model of vaccine trials for endemic infections using group randomization. Epidemiology and Infection. 132: 927-38. PMID 15473157 DOI: 10.1017/S0950268804002560  0.67
2004 Koopman J. Modeling infection transmission Annual Review of Public Health. 25: 303-326. PMID 15015922 DOI: 10.1146/Annurev.Publhealth.25.102802.124353  0.484
2003 Chick SE, Soorapanth S, Koopman JS. Inferring infection transmission parameters that influence water treatment decisions Management Science. 49: 920-935. DOI: 10.1287/Mnsc.49.7.920.16386  0.391
2002 Koopman JS. Modeling infection transmission- the pursuit of complexities that matter. Epidemiology (Cambridge, Mass.). 13: 622-4. PMID 12410001 DOI: 10.1097/00001648-200211000-00004  0.425
2002 Sander LM, Warren CP, Sokolov IM, Simon C, Koopman J. Percolation on heterogeneous networks as a model for epidemics Mathematical Biosciences. 180: 293-305. PMID 12387929 DOI: 10.1016/S0025-5564(02)00117-7  0.381
2002 Koopman JS, Chick SE, Simon CP, Riolo CS, Jacquez G. Stochastic effects on endemic infection levels of disseminating versus local contacts. Mathematical Biosciences. 180: 49-71. PMID 12387916 DOI: 10.1016/S0025-5564(02)00124-4  0.779
2001 Koopman JS, Jacquez G, Chick SE. New data and tools for integrating discrete and continuous population modeling strategies Annals of the New York Academy of Sciences. 954: 268-294. PMID 11797861 DOI: 10.1111/J.1749-6632.2001.Tb02756.X  0.417
2001 Riolo CS, Koopman JS, Chick SE. Methods and measures for the description of epidemiologic contact networks. Journal of Urban Health : Bulletin of the New York Academy of Medicine. 78: 446-57. PMID 11564848 DOI: 10.1093/Jurban/78.3.446  0.746
2001 Chick SE, Koopman JS, Soorapanth S, Brown ME. Infection transmission system models for microbial risk assessment. The Science of the Total Environment. 274: 197-207. PMID 11453296 DOI: 10.1016/S0048-9697(01)00749-5  0.458
2000 Koopman JS, Chick SE, Riolo CS, Adams AL, Wilson ML, Becker MP. Modeling contact networks and infection transmission in geographic and social space using GERMS. Sexually Transmitted Diseases. 27: 617-26. PMID 11099077 DOI: 10.1097/00007435-200011000-00010  0.764
2000 Koopman J, Chick S, Jacquez G. Analyzing sensitivity to model form assumptions of infection transmission system models. Annals of Epidemiology. 10: 472. PMID 11018405 DOI: 10.1016/S1047-2797(00)00092-2  0.436
2000 Chick SE, Adams AL, Koopman JS. Analysis and simulation of a stochastic, discrete-individual model of STD transmission with partnership concurrency Mathematical Biosciences. 166: 45-68. PMID 10882799 DOI: 10.1016/S0025-5564(00)00028-6  0.468
1999 Koopman JS, Lynch JW. Individual causal models and population system models in epidemiology American Journal of Public Health. 89: 1170-1174. PMID 10432901 DOI: 10.2105/Ajph.89.8.1170  0.394
1998 Foxman B, Marsh J, Gillespie B, Rubin N, Koopman JS, Spear S. Condom Use and First-Time Urinary Tract Infection The Journal of Urology. 160: 1604-1604. DOI: 10.1016/S0022-5347(01)62668-5  0.387
1997 Foxman B, Marsh J, Gillespie B, Rubin N, Koopman JS, Spear S. Condom use and first-time urinary tract infection. Epidemiology (Cambridge, Mass.). 8: 637-41. PMID 9345662 DOI: 10.1097/00001648-199710000-00004  0.39
1997 Koopman JS, Jacquez JA, Welch GW, Simon CP, Foxman B, Pollock SM, Barth-Jones D, Adams AL, Lange K. The role of early HIV infection in the spread of HIV through populations. Journal of Acquired Immune Deficiency Syndromes and Human Retrovirology : Official Publication of the International Retrovirology Association. 14: 249-58. PMID 9117458 DOI: 10.1097/00042560-199703010-00009  0.507
1995 Foxman B, Geiger AM, Palin K, Koopman JS, Gillespie B. First-time urinary tract infection and sexual behavior Epidemiology. 6: 162-168. PMID 7742403 DOI: 10.1097/00001648-199503000-00013  0.331
1995 Koopman JS, Little RJ. Assessing HIV vaccine effects American Journal of Epidemiology. 142: 1113-1120. PMID 7485056 DOI: 10.1093/Oxfordjournals.Aje.A117564  0.395
1994 Koopman JS, Longini IM. The ecological effects of individual exposures and nonlinear disease dynamics in populations American Journal of Public Health. 84: 836-842. PMID 8179058 DOI: 10.2105/Ajph.84.5.836  0.439
1994 Jacquez JA, Koopman JS, Simon CP, Longini IM. Role of the primary infection in epidemics of HIV infection in gay cohorts. Journal of Acquired Immune Deficiency Syndromes. 7: 1169-84. PMID 7932084 DOI: 10.1097/00042560-199505010-00020  0.473
1991 Koopman JS, Longini IM, Jacquez JA, Simon CP, Ostrow DG, Martin WR, Woodcock DM. Assessing risk factors for transmission of infection. American Journal of Epidemiology. 133: 1199-209. PMID 2063828 DOI: 10.1093/Oxfordjournals.Aje.A115832  0.412
1991 Koopman JS, Prevots DR, Mann MAV, Dantes HG, Aquino MLZ, Longini IM, Amor JS. Determinants and predictors of dengue infection in Mexico American Journal of Epidemiology. 133: 1168-1178. PMID 2035520 DOI: 10.1093/Oxfordjournals.Aje.A115829  0.381
1990 Sattenspiel L, Koopman J, Simon C, Jacquez JA. The effects of population structure on the spread of the HIV infection. American Journal of Physical Anthropology. 82: 421-9. PMID 2399955 DOI: 10.1002/Ajpa.1330820404  0.492
1989 Koopman JS, Monto AS, Ira M L. The tecumseh study XVI: Family and community sources of rotavirus infection American Journal of Epidemiology. 130: 760-768. PMID 2773919 DOI: 10.1093/Oxfordjournals.Aje.A115397  0.427
1989 Koopman JS, Monto AS. The tecumseh study XV: Rota virus infection and pathogenicity American Journal of Epidemiology. 130: 750-759. PMID 2549788 DOI: 10.1093/Oxfordjournals.Aje.A115396  0.416
1988 Longini IM, Koopman JS, Haber M, Cotsonis GA. Statistical inference for infectious diseases: Risk-specific household and community transmission parameters American Journal of Epidemiology. 128: 845-859. PMID 3421247 DOI: 10.1093/Oxfordjournals.Aje.A115038  0.402
1988 Jacquez JA, Simon CP, Koopman J, Sattenspiel L, Perry T. Modeling and analyzing HIV transmission: the effect of contact patterns Mathematical Biosciences. 92: 119-199. DOI: 10.1016/0025-5564(88)90031-4  0.45
1986 Monto AS, Koopman JS, Bryan ER. The tecumseh study of illness. XIV: Occurrence OF respiratory viruses, 1970-1981 American Journal of Epidemiology. 124: 359-367. PMID 3017099 DOI: 10.1093/Oxfordjournals.Aje.A114406  0.31
1985 Monto AS, Koopman JS, Longini IM. Tecumseh study of illness. XIII. Influenza infection and disease, 1976-1981 American Journal of Epidemiology. 121: 811-822. PMID 4014174 DOI: 10.1093/Oxfordjournals.Aje.A114052  0.338
1984 Longini IM, Seaholm SK, Ackerman E, Koopman JS, Monto AS. Simulation studies of influenza epidemics: assessment of parameter estimation and sensitivity. International Journal of Epidemiology. 13: 496-501. PMID 6519891 DOI: 10.1093/Ije/13.4.496  0.343
1982 Longini IM, Koopman JS, Monto AS, Fox JP. Estimating household and community transmission parameters for influenza American Journal of Epidemiology. 115: 736-751. PMID 7081204 DOI: 10.1093/Oxfordjournals.Aje.A113356  0.415
1982 Koopman JS, Eckert EA, Greenberg HB, Strohm BC, Isaacson RE, Monto AS. Norwalk virus enteric illness acquired by swimming exposure American Journal of Epidemiology. 115: 173-177. PMID 6277185 DOI: 10.1093/Oxfordjournals.Aje.A113288  0.311
1982 Longini IM, Koopman JS. Household and Community Transmission Parameters from Final Distributions of Infections in Households Biometrics. 38: 115. DOI: 10.2307/2530294  0.45
1979 Koopman JS. Models of transmission of infectious agents Journal of Infectious Diseases. 139: 616-618. PMID 438553 DOI: 10.1093/Infdis/139.5.616  0.35
1975 Koopman JS, Campbell J. The role of cutaneous diphtheria infections in a diphtheria epidemic Journal of Infectious Diseases. 131: 239-244. PMID 805182 DOI: 10.1093/Infdis/131.3.239  0.403
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