Zhijin Wu, Ph.D. - Publications

Affiliations: 
2005 Johns Hopkins University, Baltimore, MD 
Area:
Biostatistics Biology

19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Su K, Wu Z, Wu H. Simulation, Power Evaluation, and Sample Size Recommendation for Single Cell RNA-seq. Bioinformatics (Oxford, England). PMID 32614380 DOI: 10.1093/Bioinformatics/Btaa607  0.327
2019 Wu Z, Yan J, Wang K, Liu X, Guo Y, Zhi D, Ruan J, Zhao Z. The International Conference on Intelligent Biology and Medicine (ICIBM) 2018: genomics with bigger data and wider applications. Bmc Genomics. 20: 80. PMID 30712512 DOI: 10.1186/S12864-018-5369-3  0.338
2018 Wang K, Liu X, Guo Y, Wu Z, Zhi D, Ruan J, Zhao Z. The International Conference on Intelligent Biology and Medicine (ICIBM) 2018: systems biology on diverse data types. Bmc Systems Biology. 12: 125. PMID 30577731 DOI: 10.1186/S12918-018-0648-9  0.334
2018 Wu Z, Zhang Y, Stitzel ML, Wu H. Two-phase differential expression analysis for single cell RNA-seq. Bioinformatics (Oxford, England). PMID 29688282 DOI: 10.1093/Bioinformatics/Bty329  0.347
2017 Li N, McCall MN, Wu Z. Establishing Informative Prior for Gene Expression Variance from Public Databases Statistics in Biosciences. 9: 160-177. DOI: 10.1007/S12561-016-9172-X  0.357
2016 Mossman JA, Tross JG, Li N, Wu Z, Rand DM. Mitochondrial-Nuclear Interactions Mediate Sex-Specific Transcriptional Profiles in Drosophila. Genetics. PMID 27558138 DOI: 10.1534/Genetics.116.192328  0.302
2015 Wu H, Wang C, Wu Z. PROPER: comprehensive power evaluation for differential expression using RNA-seq. Bioinformatics (Oxford, England). 31: 233-41. PMID 25273110 DOI: 10.1093/Bioinformatics/Btu640  0.354
2013 Dunn CW, Luo X, Wu Z. Phylogenetic analysis of gene expression. Integrative and Comparative Biology. 53: 847-56. PMID 23748631 DOI: 10.1093/Icb/Ict068  0.36
2013 Wu H, Wang C, Wu Z. A new shrinkage estimator for dispersion improves differential expression detection in RNA-seq data. Biostatistics (Oxford, England). 14: 232-43. PMID 23001152 DOI: 10.1093/Biostatistics/Kxs033  0.372
2012 Hansen KD, Irizarry RA, Wu Z. Removing technical variability in RNA-seq data using conditional quantile normalization. Biostatistics (Oxford, England). 13: 204-16. PMID 22285995 DOI: 10.1093/Biostatistics/Kxr054  0.378
2011 Hansen KD, Wu Z, Irizarry RA, Leek JT. Sequencing technology does not eliminate biological variability. Nature Biotechnology. 29: 572-3. PMID 21747377 DOI: 10.1038/Nbt.1910  0.322
2011 Yegnasubramanian S, Wu Z, Haffner MC, Esopi D, Aryee MJ, Badrinath R, He TL, Morgan JD, Carvalho B, Zheng Q, De Marzo AM, Irizarry RA, Nelson WG. Chromosome-wide mapping of DNA methylation patterns in normal and malignant prostate cells reveals pervasive methylation of gene-associated and conserved intergenic sequences. Bmc Genomics. 12: 313. PMID 21669002 DOI: 10.1186/1471-2164-12-313  0.318
2010 Wu Z, Jenkins BD, Rynearson TA, Dyhrman ST, Saito MA, Mercier M, Whitney LP. Empirical bayes analysis of sequencing-based transcriptional profiling without replicates. Bmc Bioinformatics. 11: 564. PMID 21080965 DOI: 10.1186/1471-2105-11-564  0.358
2009 Wu Z. A review of statistical methods for preprocessing oligonucleotide microarrays. Statistical Methods in Medical Research. 18: 533-41. PMID 20048383 DOI: 10.1177/0962280209351924  0.338
2009 Sui Y, Zhao X, Speed TP, Wu Z. Background adjustment for DNA microarrays using a database of microarray experiments. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 16: 1501-15. PMID 19958080 DOI: 10.1089/Cmb.2009.0063  0.325
2007 Wu Z, Irizarry RA. A statistical framework for the analysis of microarray probe-level data The Annals of Applied Statistics. 1: 333-357. DOI: 10.1214/07-Aoas116  0.337
2005 Wu Z, Irizarry RA. Stochastic models inspired by hybridization theory for short oligonucleotide arrays. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 12: 882-93. PMID 16108723 DOI: 10.1089/Cmb.2005.12.882  0.33
2004 Cope LM, Irizarry RA, Jaffee HA, Wu Z, Speed TP. A benchmark for Affymetrix GeneChip expression measures. Bioinformatics (Oxford, England). 20: 323-31. PMID 14960458 DOI: 10.1093/Bioinformatics/Btg410  0.346
2004 Wu Z, Irizarry RA, Gentleman R, Martinez-Murillo F, Spencer F. A model-based background adjustment for oligonucleotide expression arrays Journal of the American Statistical Association. 99: 909-917. DOI: 10.1198/016214504000000683  0.366
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