| Year |
Citation |
Score |
| 2020 |
Pavlovic Djuranovic S, Erath J, Andrews RJ, Bayguinov PO, Chung JJ, Chalker DL, Fitzpatrick JA, Moss WN, Szczesny P, Djuranovic S. translational machinery condones polyadenosine repeats. Elife. 9. PMID 32469313 DOI: 10.7554/Elife.57799 |
0.441 |
|
| 2019 |
Jaspan VN, Taye ME, Carle CM, Chung JJ, Chalker DL. Boundaries of eliminated heterochromatin of Tetrahymena are positioned by the DNA-binding protein Ltl1. Nucleic Acids Research. PMID 31194876 DOI: 10.1093/Nar/Gkz504 |
0.569 |
|
| 2019 |
Lin CG, Chao JL, Tsai HK, Chalker D, Yao MC. Setting boundaries for genome-wide heterochromatic DNA deletions through flanking inverted repeats in Tetrahymena thermophile. Nucleic Acids Research. PMID 31165879 DOI: 10.1093/nar/gkz481 |
0.417 |
|
| 2019 |
Lin CG, Chao JL, Tsai HK, Chalker D, Yao MC. Setting boundaries for genome-wide heterochromatic DNA deletions through flanking inverted repeats in Tetrahymena thermophila. Nucleic Acids Research. PMID 30918956 DOI: 10.1093/Nar/Gkz209 |
0.498 |
|
| 2018 |
Chalker DL. Transgenerational Inheritance: Parental Guidance Suggested. Current Biology : Cb. 28: R702-R704. PMID 29920263 DOI: 10.1016/J.Cub.2018.05.041 |
0.468 |
|
| 2017 |
Arthur LL, Chung JJ, Jankirama P, Keefer KM, Kolotilin I, Pavlovic-Djuranovic S, Chalker DL, Grbic V, Green R, Menassa R, True HL, Skeath JB, Djuranovic S. Rapid generation of hypomorphic mutations. Nature Communications. 8: 14112. PMID 28106166 DOI: 10.1038/Ncomms14112 |
0.387 |
|
| 2016 |
Bright LJ, Chalker DL. One genome's junk is another's garbage. Elife. 5. PMID 28008854 DOI: 10.7554/Elife.23447 |
0.421 |
|
| 2016 |
McDaniel SL, Zweifel E, Harris PK, Yao MC, Cole ES, Chalker DL. DRH1, a p68-related RNA helicase, is required for chromosome breakage in Tetrahymena. Biology Open. PMID 27793833 DOI: 10.1242/Bio.021576 |
0.591 |
|
| 2016 |
Carle CM, Zaher HS, Chalker DL. A Parallel G Quadruplex-Binding Protein Regulates the Boundaries of DNA Elimination Events of Tetrahymena thermophila. Plos Genetics. 12: e1005842. PMID 26950070 DOI: 10.1371/Journal.Pgen.1005842 |
0.517 |
|
| 2015 |
Nasir AM, Yang Q, Chalker DL, Forney JD. SUMOylation is developmentally regulated and required for cell pairing during conjugation in Tetrahymena thermophila. Eukaryotic Cell. 14: 170-81. PMID 25527524 DOI: 10.1128/Ec.00252-14 |
0.469 |
|
| 2014 |
Horrell SA, Chalker DL. LIA4 encodes a chromoshadow domain protein required for genomewide DNA rearrangements in Tetrahymena thermophila. Eukaryotic Cell. 13: 1300-11. PMID 25084866 DOI: 10.1128/Ec.00125-14 |
0.806 |
|
| 2014 |
Chalker DL. Epigenetics: Keeping one's sex. Nature. 509: 430-1. PMID 24805241 DOI: 10.1038/Nature13333 |
0.515 |
|
| 2014 |
Schwope RM, Chalker DL. Mutations in Pdd1 reveal distinct requirements for its chromodomain and chromoshadow domain in directing histone methylation and heterochromatin elimination. Eukaryotic Cell. 13: 190-201. PMID 24297443 DOI: 10.1128/Ec.00219-13 |
0.783 |
|
| 2013 |
Chalker DL, Meyer E, Mochizuki K. Epigenetics of ciliates. Cold Spring Harbor Perspectives in Biology. 5: a017764. PMID 24296171 DOI: 10.1002/3527600906.Mcb.201100024 |
0.611 |
|
| 2013 |
Shieh AW, Chalker DL. LIA5 is required for nuclear reorganization and programmed DNA rearrangements occurring during tetrahymena macronuclear differentiation. Plos One. 8: e75337. PMID 24069402 DOI: 10.1371/Journal.Pone.0075337 |
0.822 |
|
| 2013 |
Horrell SA, Chalker DL. Genome biology: the sleek and oh-so chic Oxytricha nanochromosomes. Current Biology : Cb. 23: R284-5. PMID 23578878 DOI: 10.1016/J.Cub.2013.02.041 |
0.766 |
|
| 2012 |
Chalker DL. Transformation and strain engineering of Tetrahymena. Methods in Cell Biology. 109: 327-45. PMID 22444150 DOI: 10.1016/B978-0-12-385967-9.00011-6 |
0.503 |
|
| 2011 |
Fass JN, Joshi NA, Couvillion MT, Bowen J, Gorovsky MA, Hamilton EP, Orias E, Hong K, Coyne RS, Eisen JA, Chalker DL, Lin D, Collins K. Genome-Scale Analysis of Programmed DNA Elimination Sites in Tetrahymena thermophila. G3 (Bethesda, Md.). 1: 515-22. PMID 22384362 DOI: 10.1534/G3.111.000927 |
0.58 |
|
| 2011 |
Motl JA, Chalker DL. Zygotic expression of the double-stranded RNA binding motif protein Drb2p is required for DNA elimination in the ciliate Tetrahymena thermophila. Eukaryotic Cell. 10: 1648-59. PMID 22021239 DOI: 10.1128/Ec.05216-11 |
0.806 |
|
| 2011 |
Chalker DL, Yao MC. DNA elimination in ciliates: transposon domestication and genome surveillance. Annual Review of Genetics. 45: 227-46. PMID 21910632 DOI: 10.1146/Annurev-Genet-110410-132432 |
0.667 |
|
| 2010 |
Matsuda A, Shieh AW, Chalker DL, Forney JD. The conjugation-specific Die5 protein is required for development of the somatic nucleus in both Paramecium and Tetrahymena. Eukaryotic Cell. 9: 1087-99. PMID 20495055 DOI: 10.1128/Ec.00379-09 |
0.844 |
|
| 2009 |
Motl JA, Chalker DL. Subtraction by addition: domesticated transposases in programmed DNA elimination. Genes & Development. 23: 2455-60. PMID 19884252 DOI: 10.1101/Gad.1864609 |
0.805 |
|
| 2009 |
Chalker DL. Transposons that clean up after themselves. Genome Biology. 10: 224. PMID 19589181 DOI: 10.1186/Gb-2009-10-6-224 |
0.556 |
|
| 2008 |
Chalker DL. Ciliate biology: dynamin goes nuclear. Current Biology : Cb. 18: R923-5. PMID 18957241 DOI: 10.1016/J.Cub.2008.07.080 |
0.386 |
|
| 2008 |
Chalker DL. Dynamic nuclear reorganization during genome remodeling of Tetrahymena. Biochimica Et Biophysica Acta. 1783: 2130-6. PMID 18706458 DOI: 10.1016/J.Bbamcr.2008.07.012 |
0.667 |
|
| 2008 |
Cole ES, Anderson PC, Fulton RB, Majerus ME, Rooney MG, Savage JM, Chalker D, Honts J, Welch ME, Wentland AL, Zweifel E, Beussman DJ. A proteomics approach to cloning fenestrin from the nuclear exchange junction of tetrahymena. The Journal of Eukaryotic Microbiology. 55: 245-56. PMID 18681839 DOI: 10.1111/J.1550-7408.2008.00337.X |
0.474 |
|
| 2008 |
Malone CD, Falkowska KA, Li AY, Galanti SE, Kanuru RC, LaMont EG, Mazzarella KC, Micev AJ, Osman MM, Piotrowski NK, Suszko JW, Timm AC, Xu MM, Liu L, Chalker DL. Nucleus-specific importin alpha proteins and nucleoporins regulate protein import and nuclear division in the binucleate Tetrahymena thermophila. Eukaryotic Cell. 7: 1487-99. PMID 18676955 DOI: 10.1128/Ec.00193-08 |
0.451 |
|
| 2007 |
Rexer CH, Chalker DL. Lia1p, a novel protein required during nuclear differentiation for genome-wide DNA rearrangements in Tetrahymena thermophila. Eukaryotic Cell. 6: 1320-9. PMID 17586719 DOI: 10.1128/Ec.00157-07 |
0.826 |
|
| 2007 |
Yao MC, Yao CH, Halasz LM, Fuller P, Rexer CH, Wang SH, Jain R, Coyne RS, Chalker DL. Identification of novel chromatin-associated proteins involved in programmed genome rearrangements in Tetrahymena. Journal of Cell Science. 120: 1978-89. PMID 17519286 DOI: 10.1242/Jcs.006502 |
0.814 |
|
| 2007 |
Chalker DL, Stover NA. Genome evolution: a double take for Paramecium. Current Biology : Cb. 17: R97-9. PMID 17276910 DOI: 10.1016/J.Cub.2006.12.002 |
0.48 |
|
| 2006 |
Kowalczyk CA, Anderson AM, Arce-Larreta M, Chalker DL. The germ line limited M element of Tetrahymena is targeted for elimination from the somatic genome by a homology-dependent mechanism. Nucleic Acids Research. 34: 5778-89. PMID 17053100 DOI: 10.1093/Nar/Gkl699 |
0.537 |
|
| 2005 |
Chalker DL. Genome rearrangements: mother knows best! Current Biology : Cb. 15: R827-9. PMID 16243019 DOI: 10.1016/J.Cub.2005.09.045 |
0.571 |
|
| 2005 |
Malone CD, Anderson AM, Motl JA, Rexer CH, Chalker DL. Germ line transcripts are processed by a Dicer-like protein that is essential for developmentally programmed genome rearrangements of Tetrahymena thermophila. Molecular and Cellular Biology. 25: 9151-64. PMID 16199890 DOI: 10.1128/Mcb.25.20.9151-9164.2005 |
0.733 |
|
| 2005 |
Chalker DL, Fuller P, Yao MC. Communication between parental and developing genomes during tetrahymena nuclear differentiation is likely mediated by homologous RNAs. Genetics. 169: 149-60. PMID 15466428 DOI: 10.1534/Genetics.104.032300 |
0.565 |
|
| 2001 |
Chalker DL, Yao MC. Nongenic, bidirectional transcription precedes and may promote developmental DNA deletion in Tetrahymena thermophila Genes and Development. 15: 1287-1298. PMID 11358871 DOI: 10.1101/Gad.884601 |
0.517 |
|
| 1999 |
Chalker DL, La Terza A, Wilson A, Kroenke CD, Yao MC. Flanking regulatory sequences of the Tetrahymena R deletion element determine the boundaries of DNA rearrangement. Molecular and Cellular Biology. 19: 5631-41. PMID 10409752 DOI: 10.1128/Mcb.19.8.5631 |
0.397 |
|
| 1996 |
Coyne RS, Chalker DL, Yao MC. Genome downsizing during ciliate development: Nuclear division of labor through chromosome restructuring Annual Review of Genetics. 30: 557-578. PMID 8982465 DOI: 10.1146/Annurev.Genet.30.1.557 |
0.488 |
|
| 1996 |
Chalker DL, Yao MC. Non-mendelian, heritable blocks to DNA rearrangement are induced by loading the somatic nucleus of Tetrahymena thermophila with germ line-limited DNA Molecular and Cellular Biology. 16: 3658-3667. PMID 8668182 DOI: 10.1128/Mcb.16.7.3658 |
0.438 |
|
| 1993 |
Chalker DL, Sandmeyer SB. Sites of RNA polymerase III transcription initiation and Ty3 integration at the U6 gene are positioned by the TATA box Proceedings of the National Academy of Sciences of the United States of America. 90: 4927-4931. PMID 8389458 DOI: 10.1073/Pnas.90.11.4927 |
0.414 |
|
| 1992 |
Hansen LJ, Chalker DL, Orlinsky KJ, Sandmeyer SB. Tye GAG3 and POL3 genes encode the components of intracellular particles Journal of Virology. 66: 1414-1424. PMID 1371165 DOI: 10.1128/Jvi.66.3.1414-1424.1992 |
0.433 |
|
| 1992 |
Chalker DL, Sandmeyer SB. Ty3 integrates within the region of RNA polymerase III transcription initiation Genes and Development. 6: 117-128. PMID 1309715 DOI: 10.1101/Gad.6.1.117 |
0.45 |
|
| 1990 |
Sandmeyer SB, Hansen LJ, Chalker DL. Integration specificity of retrotransposons and retroviruses Annual Review of Genetics. 24: 491-518. PMID 1965102 DOI: 10.1146/Annurev.Ge.24.120190.002423 |
0.49 |
|
| 1990 |
Chalker DL, Sandmeyer SB. Transfer RNA genes are genomic targets for de novo transposition of the yeast retrotransposan Ty3 Genetics. 126: 837-850. PMID 1963869 |
0.471 |
|
| 1988 |
Hansen LJ, Chalker DL, Sandmeyer SB. Ty3, a yeast retrotransposon associated with tRNA genes, has homology to animal retroviruses Molecular and Cellular Biology. 8: 5245-5256. PMID 2854194 DOI: 10.1128/Mcb.8.12.5245 |
0.433 |
|
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