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Marc Bühler - Publications

Affiliations: 
Friedrich Miescher Institute for Biomedical Research, Basel, Basel-Stadt, Switzerland 
Area:
non-coding RNA, RNAi, epigenetics, chromatin-dependent gene silencing
Website:
http://www.fmi.ch/html/research/research_groups/epigenetics/marc_buehler/marc_buehler.html
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42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Gil N, Perry RB, Mukamel Z, Tuck A, Bühler M, Ulitsky I. Complex regulation of Eomes levels mediated through distinct functional features of the Meteor long non-coding RNA locus. Cell Reports. 42: 112569. PMID 37256750 DOI: 10.1016/j.celrep.2023.112569  0.466
2023 Flemr M, Schwaiger M, Hess D, Iesmantavicius V, Ahel J, Tuck AC, Mohn F, Buhler M. Mouse Nuclear RNAi-defective 2 Promotes Splicing of Weak 5' Splice Sites. Rna (New York, N.Y.). PMID 37137667 DOI: 10.1261/rna.079465.122  0.723
2021 Shimada Y, Carl SH, Skribbe M, Flury V, Kuzdere T, Kempf G, Bühler M. An enhancer screen identifies new suppressors of small-RNA-mediated epigenetic gene silencing. Plos Genetics. 17: e1009645. PMID 34157021 DOI: 10.1371/journal.pgen.1009645  0.594
2021 Duda KJ, Ching RW, Jerabek L, Shukeir N, Erikson G, Engist B, Onishi-Seebacher M, Perrera V, Richter F, Mittler G, Fritz K, Helm M, Knuckles P, Bühler M, Jenuwein T. m6A RNA methylation of major satellite repeat transcripts facilitates chromatin association and RNA:DNA hybrid formation in mouse heterochromatin. Nucleic Acids Research. PMID 33999208 DOI: 10.1093/nar/gkab364  0.609
2021 Tuck AC, Bühler M. Long Non-coding RNA Depletion Using Self-Cleaving Ribozymes. Methods in Molecular Biology (Clifton, N.J.). 2167: 287-301. PMID 32712926 DOI: 10.1007/978-1-0716-0716-9_16  0.508
2020 Bühler M, Tuck AC. Publisher Correction: Scaling up dissection of functional RNA elements. Nature Structural & Molecular Biology. PMID 32788692 DOI: 10.1038/s41594-020-0491-8  0.314
2020 Bühler M, Tuck AC. Scaling up dissection of functional RNA elements. Nature Structural & Molecular Biology. PMID 32747786 DOI: 10.1038/s41594-020-0482-9  0.368
2020 Tuck AC, Rankova A, Arpat AB, Liechti LA, Hess D, Iesmantavicius V, Castelo-Szekely V, Gatfield D, Bühler M. Mammalian RNA Decay Pathways Are Highly Specialized and Widely Linked to Translation. Molecular Cell. PMID 32048998 DOI: 10.1016/j.molcel.2020.01.007  0.486
2020 Duempelmann L, Skribbe M, Bühler M. Small RNAs in the Transgenerational Inheritance of Epigenetic Information. Trends in Genetics : Tig. PMID 31952840 DOI: 10.1016/j.tig.2019.12.001  0.505
2019 Welte T, Tuck AC, Papasaikas P, Carl SH, Flemr M, Knuckles P, Rankova A, Bühler M, Großhans H. The RNA hairpin binder TRIM71 modulates alternative splicing by repressing MBNL1. Genes & Development. PMID 31371437 DOI: 10.1101/Gad.328492.119  0.451
2019 Duempelmann L, Mohn F, Shimada Y, Oberti D, Andriollo A, Lochs S, Bühler M. Inheritance of a Phenotypically Neutral Epimutation Evokes Gene Silencing in Later Generations. Molecular Cell. PMID 30898439 DOI: 10.1016/j.molcel.2019.02.009  0.601
2018 Tuck AC, Natarajan KN, Rice GM, Borawski J, Mohn F, Rankova A, Flemr M, Wenger A, Nutiu R, Teichmann S, Bühler M. Distinctive features of lincRNA gene expression suggest widespread RNA-independent functions. Life Science Alliance. 1: e201800124. PMID 30456373 DOI: 10.26508/lsa.201800124  0.529
2018 Ostapcuk V, Mohn F, Carl SH, Basters A, Hess D, Iesmantavicius V, Lampersberger L, Flemr M, Pandey A, Thomä NH, Betschinger J, Bühler M. Activity-dependent neuroprotective protein recruits HP1 and CHD4 to control lineage-specifying genes. Nature. 557: 739-743. PMID 29795351 DOI: 10.1038/S41586-018-0153-8  0.414
2018 Knuckles P, Bühler M. Adenosine methylation as a molecular imprint defining the fate of RNA. Febs Letters. PMID 29782652 DOI: 10.1002/1873-3468.13107  0.416
2018 Knuckles P, Lence T, Haussmann IU, Jacob D, Kreim N, Carl SH, Masiello I, Hares T, Villaseñor R, Hess D, Andrade-Navarro MA, Biggiogera M, Helm M, Soller M, Bühler M, et al. Zc3h13/Flacc is required for adenosine methylation by bridging the mRNA-binding factor Rbm15/Spenito to the mA machinery component Wtap/Fl(2)d. Genes & Development. PMID 29535189 DOI: 10.1101/Gad.309146.117  0.331
2017 Berry S, Rosa S, Howard M, Bühler M, Dean C. Disruption of an RNA-binding hinge region abolishes LHP1-mediated epigenetic repression. Genes & Development. 31: 2115-2120. PMID 29212661 DOI: 10.1101/Gad.305227.117  0.534
2017 Flury V, Georgescu PR, Iesmantavicius V, Shimada Y, Kuzdere T, Braun S, Bühler M. The Histone Acetyltransferase Mst2 Protects Active Chromatin from Epigenetic Silencing by Acetylating the Ubiquitin Ligase Brl1. Molecular Cell. PMID 28648780 DOI: 10.1016/j.molcel.2017.05.026  0.341
2017 Knuckles P, Carl SH, Musheev M, Niehrs C, Wenger A, Bühler M. RNA fate determination through cotranscriptional adenosine methylation and microprocessor binding. Nature Structural & Molecular Biology. PMID 28581511 DOI: 10.1038/Nsmb.3419  0.592
2016 Shimada Y, Mohn F, Bühler M. The RNA-induced transcriptional silencing complex targets chromatin exclusively via interacting with nascent transcripts. Genes & Development. PMID 27941123 DOI: 10.1101/gad.292599.116  0.649
2015 Stunnenberg R, Kulasegaran-Shylini R, Keller C, Kirschmann MA, Gelman L, Bühler M. H3K9 methylation extends across natural boundaries of heterochromatin in the absence of an HP1 protein. The Embo Journal. 34: 2789-803. PMID 26438724 DOI: 10.15252/embj.201591320  0.514
2015 Kowalik KM, Shimada Y, Flury V, Stadler MB, Batki J, Bühler M. The Paf1 complex represses small-RNA-mediated epigenetic gene silencing. Nature. 520: 248-52. PMID 25807481 DOI: 10.1038/nature14337  0.657
2013 Woolcock KJ, Bühler M. Nuclear organisation and RNAi in fission yeast. Current Opinion in Cell Biology. 25: 372-7. PMID 23453865 DOI: 10.1016/j.ceb.2013.02.004  0.386
2013 Tropberger P, Pott S, Keller C, Kamieniarz-Gdula K, Caron M, Richter F, Li G, Mittler G, Liu ET, Bühler M, Margueron R, Schneider R. Regulation of transcription through acetylation of H3K122 on the lateral surface of the histone octamer. Cell. 152: 859-72. PMID 23415232 DOI: 10.1016/J.Cell.2013.01.032  0.314
2012 Stunnenberg R, Bühler M. A detour to mature. Molecular Cell. 46: 719-21. PMID 22749397 DOI: 10.1016/j.molcel.2012.06.004  0.46
2011 Woolcock KJ, Gaidatzis D, Punga T, Bühler M. Dicer associates with chromatin to repress genome activity in Schizosaccharomyces pombe. Nature Structural & Molecular Biology. 18: 94-9. PMID 21151114 DOI: 10.1038/nsmb.1935  0.593
2010 Punga T, Bühler M. Long intronic GAA repeats causing Friedreich ataxia impede transcription elongation. Embo Molecular Medicine. 2: 120-9. PMID 20373285 DOI: 10.1002/emmm.201000064  0.427
2010 Bühler M. RNA brings chromatin into shape Biochemist. 32: 8-10.  0.52
2009 Bühler M, Gasser SM. Silent chromatin at the middle and ends: lessons from yeasts. The Embo Journal. 28: 2149-61. PMID 19629038 DOI: 10.1038/emboj.2009.185  0.331
2009 Bühler M. RNA turnover and chromatin-dependent gene silencing. Chromosoma. 118: 141-51. PMID 19023586 DOI: 10.1007/s00412-008-0195-z  0.604
2008 Bühler M, Spies N, Bartel DP, Moazed D. TRAMP-mediated RNA surveillance prevents spurious entry of RNAs into the Schizosaccharomyces pombe siRNA pathway. Nature Structural & Molecular Biology. 15: 1015-23. PMID 18776903 DOI: 10.1038/Nsmb.1481  0.755
2007 Bühler M, Moazed D. Transcription and RNAi in heterochromatic gene silencing. Nature Structural & Molecular Biology. 14: 1041-8. PMID 17984966 DOI: 10.1038/Nsmb1315  0.76
2007 Colmenares SU, Buker SM, Buhler M, Dlaki? M, Moazed D. Coupling of double-stranded RNA synthesis and siRNA generation in fission yeast RNAi. Molecular Cell. 27: 449-61. PMID 17658285 DOI: 10.1016/J.Molcel.2007.07.007  0.745
2007 Bühler M, Haas W, Gygi SP, Moazed D. RNAi-dependent and -independent RNA turnover mechanisms contribute to heterochromatic gene silencing. Cell. 129: 707-21. PMID 17512405 DOI: 10.1016/J.Cell.2007.03.038  0.765
2007 Buker SM, Iida T, Bühler M, Villén J, Gygi SP, Nakayama J, Moazed D. Two different Argonaute complexes are required for siRNA generation and heterochromatin assembly in fission yeast. Nature Structural & Molecular Biology. 14: 200-7. PMID 17310250 DOI: 10.1038/Nsmb1211  0.803
2006 Moazed D, Bühler M, Buker SM, Colmenares SU, Gerace EL, Gerber SA, Hong EJ, Motamedi MR, Verdel A, Villén J, Gygi SP. Studies on the mechanism of RNAi-dependent heterochromatin assembly. Cold Spring Harbor Symposia On Quantitative Biology. 71: 461-71. PMID 17381328 DOI: 10.1101/Sqb.2006.71.044  0.642
2006 Bühler M, Verdel A, Moazed D. Tethering RITS to a nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing. Cell. 125: 873-86. PMID 16751098 DOI: 10.1016/J.Cell.2006.04.025  0.841
2006 Bühler M, Steiner S, Mohn F, Paillusson A, Mühlemann O. EJC-independent degradation of nonsense immunoglobulin-mu mRNA depends on 3' UTR length. Nature Structural & Molecular Biology. 13: 462-4. PMID 16622410 DOI: 10.1038/nsmb1081  0.675
2005 Bühler M, Mohn F, Stalder L, Mühlemann O. Transcriptional silencing of nonsense codon-containing immunoglobulin minigenes. Molecular Cell. 18: 307-17. PMID 15866173 DOI: 10.1016/j.molcel.2005.03.030  0.723
2005 Bühler M, Mühlemann O. Alternative splicing induced by nonsense mutations in the immunoglobulin mu VDJ exon is independent of truncation of the open reading frame. Rna (New York, N.Y.). 11: 139-46. PMID 15613538 DOI: 10.1261/rna.7183805  0.703
2005 Mohn F, Bühler M, Mühlemann O. Nonsense-associated alternative splicing of T-cell receptor beta genes: no evidence for frame dependence. Rna (New York, N.Y.). 11: 147-56. PMID 15613535 DOI: 10.1261/rna.7182905  0.651
2004 Bühler M, Paillusson A, Mühlemann O. Efficient downregulation of immunoglobulin mu mRNA with premature translation-termination codons requires the 5'-half of the VDJ exon. Nucleic Acids Research. 32: 3304-15. PMID 15210863 DOI: 10.1093/nar/gkh651  0.679
2002 Bühler M, Wilkinson MF, Mühlemann O. Intranuclear degradation of nonsense codon-containing mRNA. Embo Reports. 3: 646-51. PMID 12101097 DOI: 10.1093/Embo-Reports/Kvf129  0.679
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