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Vivek Jayaraman - Publications

Affiliations: 
Janelia Research Campus / HHMI 
Website:
http://research.janelia.org/Jayaraman/
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42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Hulse BK, Haberkern H, Franconville R, Turner-Evans DB, Takemura SY, Wolff T, Noorman M, Dreher M, Dan C, Parekh R, Hermundstad AM, Rubin GM, Jayaraman V. A connectome of the central complex reveals network motifs suitable for flexible navigation and context-dependent action selection. Elife. 10. PMID 34696823 DOI: 10.7554/eLife.66039  0.699
2020 Turner-Evans DB, Jensen KT, Ali S, Paterson T, Sheridan A, Ray RP, Wolff T, Lauritzen JS, Rubin GM, Bock DD, Jayaraman V. The Neuroanatomical Ultrastructure and Function of a Biological Ring Attractor. Neuron. PMID 32916090 DOI: 10.1016/j.neuron.2020.08.006  0.424
2020 Scheffer LK, Xu CS, Januszewski M, Lu Z, Takemura SY, Hayworth KJ, Huang GB, Shinomiya K, Maitlin-Shepard J, Berg S, Clements J, Hubbard PM, Katz WT, Umayam L, Zhao T, ... ... Jayaraman V, et al. A connectome and analysis of the adult central brain. Elife. 9. PMID 32880371 DOI: 10.7554/Elife.57443  0.424
2019 Hulse BK, Jayaraman V. Mechanisms Underlying the Neural Computation of Head Direction. Annual Review of Neuroscience. PMID 31874068 DOI: 10.1146/Annurev-Neuro-072116-031516  0.8
2019 Kim SS, Hermundstad AM, Romani S, Abbott LF, Jayaraman V. Generation of stable heading representations in diverse visual scenes. Nature. PMID 31748750 DOI: 10.1038/S41586-019-1767-1  0.791
2019 Dana H, Sun Y, Mohar B, Hulse BK, Kerlin AM, Hasseman JP, Tsegaye G, Tsang A, Wong A, Patel R, Macklin JJ, Chen Y, Konnerth A, Jayaraman V, Looger LL, et al. High-performance calcium sensors for imaging activity in neuronal populations and microcompartments. Nature Methods. PMID 31209382 DOI: 10.1038/S41592-019-0435-6  0.784
2019 Hulse BK, Jayaraman V. Busted! A Dope Ring with Activity Clocked at Dawn and Dusk. Neuron. 102: 713-715. PMID 31121121 DOI: 10.1016/J.Neuron.2019.05.004  0.781
2019 Haberkern H, Basnak MA, Ahanonu B, Schauder D, Cohen JD, Bolstad M, Bruns C, Jayaraman V. Visually Guided Behavior and Optogenetically Induced Learning in Head-Fixed Flies Exploring a Virtual Landscape. Current Biology : Cb. PMID 31056392 DOI: 10.1016/J.Cub.2019.04.033  0.783
2018 Franconville R, Beron C, Jayaraman V. Building a functional connectome of the central complex. Elife. 7. PMID 30124430 DOI: 10.7554/Elife.37017  0.784
2018 Franconville R, Beron C, Jayaraman V. Author response: Building a functional connectome of the Drosophila central complex Elife. DOI: 10.7554/Elife.37017.030  0.734
2017 Sun Y, Nern A, Franconville R, Dana H, Schreiter ER, Looger LL, Svoboda K, Kim DS, Hermundstad AM, Jayaraman V. Neural signatures of dynamic stimulus selection in Drosophila. Nature Neuroscience. PMID 28604683 DOI: 10.1038/Nn.4581  0.792
2017 Turner-Evans D, Wegener S, Rouault H, Franconville R, Wolff T, Seelig JD, Druckmann S, Jayaraman V. Angular velocity integration in a fly heading circuit. Elife. 6. PMID 28530551 DOI: 10.7554/Elife.23496  0.786
2017 Kim SS, Rouault H, Druckmann S, Jayaraman V. Ring attractor dynamics in the Drosophila central brain. Science (New York, N.Y.). PMID 28473639 DOI: 10.1126/Science.Aal4835  0.577
2017 Turner-Evans D, Wegener S, Rouault H, Franconville R, Wolff T, Seelig JD, Druckmann S, Jayaraman V. Author response: Angular velocity integration in a fly heading circuit Elife. DOI: 10.7554/Elife.23496.031  0.761
2016 Turner-Evans DB, Jayaraman V. The insect central complex. Current Biology : Cb. 26: R453-7. PMID 27269718 DOI: 10.1016/j.cub.2016.04.006  0.707
2016 Dana H, Mohar B, Sun Y, Narayan S, Gordus A, Hasseman JP, Tsegaye G, Holt GT, Hu A, Walpita D, Patel R, Macklin JJ, Bargmann CI, Ahrens MB, Schreiter ER, ... Jayaraman V, et al. Sensitive red protein calcium indicators for imaging neural activity. Elife. 5. PMID 27011354 DOI: 10.7554/Elife.12727  0.397
2016 Haberkern H, Jayaraman V. Studying small brains to understand the building blocks of cognition. Current Opinion in Neurobiology. 37: 59-65. PMID 26826948 DOI: 10.1016/j.conb.2016.01.007  0.775
2016 Dana H, Mohar B, Sun Y, Narayan S, Gordus A, Hasseman JP, Tsegaye G, Holt GT, Hu A, Walpita D, Patel R, Macklin JJ, Bargmann CI, Ahrens MB, Schreiter ER, ... Jayaraman V, et al. Author response: Sensitive red protein calcium indicators for imaging neural activity Elife. DOI: 10.7554/Elife.12727.035  0.335
2015 Zhou C, Franconville R, Vaughan AG, Robinett CC, Jayaraman V, Baker BS. Central neural circuitry mediating courtship song perception in male Drosophila. Elife. 4. PMID 26390382 DOI: 10.7554/Elife.08477  0.769
2015 Schulze A, Gomez-Marin A, Rajendran VG, Lott G, Musy M, Ahammad P, Deogade A, Sharpe J, Riedl J, Jarriault D, Trautman ET, Werner C, Venkadesan M, Druckmann S, Jayaraman V, et al. Dynamical feature extraction at the sensory periphery guides chemotaxis. Elife. 4. PMID 26077825 DOI: 10.7554/Elife.06694  0.755
2015 Seelig JD, Jayaraman V. Neural dynamics for landmark orientation and angular path integration. Nature. 521: 186-91. PMID 25971509 DOI: 10.1038/nature14446  0.664
2015 Fosque BF, Sun Y, Dana H, Yang CT, Ohyama T, Tadross MR, Patel R, Zlatic M, Kim DS, Ahrens MB, Jayaraman V, Looger LL, Schreiter ER. Neural circuits. Labeling of active neural circuits in vivo with designed calcium integrators. Science (New York, N.Y.). 347: 755-60. PMID 25678659 DOI: 10.1126/Science.1260922  0.405
2015 Zhou C, Franconville R, Vaughan AG, Robinett CC, Jayaraman V, Baker BS. Author response: Central neural circuitry mediating courtship song perception in male Drosophila Elife. DOI: 10.7554/Elife.08477.024  0.751
2015 Schulze A, Gomez-Marin A, Rajendran VG, Lott G, Musy M, Ahammad P, Deogade A, Sharpe J, Riedl J, Jarriault D, Trautman ET, Werner C, Venkadesan M, Druckmann S, Jayaraman V, et al. Author response: Dynamical feature extraction at the sensory periphery guides chemotaxis Elife. DOI: 10.7554/Elife.06694.040  0.711
2014 Klapoetke NC, Murata Y, Kim SS, Pulver SR, Birdsey-Benson A, Cho YK, Morimoto TK, Chuong AS, Carpenter EJ, Tian Z, Wang J, Xie Y, Yan Z, Zhang Y, Chow BY, ... ... Jayaraman V, et al. Addendum: independent optical excitation of distinct neural populations. Nature Methods. 11: 972. PMID 25317449 DOI: 10.1038/Nmeth0914-972  0.426
2014 Klapoetke NC, Murata Y, Kim SS, Pulver SR, Birdsey-Benson A, Cho YK, Morimoto TK, Chuong AS, Carpenter EJ, Tian Z, Wang J, Xie Y, Yan Z, Zhang Y, Chow BY, ... ... Jayaraman V, et al. Independent optical excitation of distinct neural populations. Nature Methods. 11: 338-46. PMID 24509633 DOI: 10.1038/Nmeth.2836  0.517
2014 Klapoetke NC, Murata Y, Kim SS, Pulver SR, Birdsey-Benson A, Cho YK, Morimoto TK, Chuong AS, Carpenter EJ, Tian Z, Wang J, Xie Y, Yan Z, Zhang Y, Chow BY, ... ... Jayaraman V, et al. Corrigendum: Independent optical excitation of distinct neural populations (Nature Methods (2014) 11, (338-346)) Nature Methods. 11: 971. DOI: 10.1038/Nmeth0914-971D  0.418
2013 Wardill TJ, Chen TW, Schreiter ER, Hasseman JP, Tsegaye G, Fosque BF, Behnam R, Shields BC, Ramirez M, Kimmel BE, Kerr RA, Jayaraman V, Looger LL, Svoboda K, Kim DS. A neuron-based screening platform for optimizing genetically-encoded calcium indicators. Plos One. 8: e77728. PMID 24155972 DOI: 10.1371/Journal.Pone.0077728  0.418
2013 Seelig JD, Jayaraman V. Feature detection and orientation tuning in the Drosophila central complex. Nature. 503: 262-6. PMID 24107996 DOI: 10.1038/nature12601  0.656
2013 Chen TW, Wardill TJ, Sun Y, Pulver SR, Renninger SL, Baohan A, Schreiter ER, Kerr RA, Orger MB, Jayaraman V, Looger LL, Svoboda K, Kim DS. Ultrasensitive fluorescent proteins for imaging neuronal activity. Nature. 499: 295-300. PMID 23868258 DOI: 10.1038/Nature12354  0.432
2012 Jayaraman V. Visual neuroscience: a moving story of neuromodulation. Current Biology : Cb. 22: R1057-9. PMID 23257195 DOI: 10.1016/j.cub.2012.11.041  0.434
2012 Akerboom J, Chen TW, Wardill TJ, Tian L, Marvin JS, Mutlu S, Calderón NC, Esposti F, Borghuis BG, Sun XR, Gordus A, Orger MB, Portugues R, Engert F, Macklin JJ, ... ... Jayaraman V, et al. Optimization of a GCaMP calcium indicator for neural activity imaging. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 13819-40. PMID 23035093 DOI: 10.1523/Jneurosci.2601-12.2012  0.417
2011 Seelig JD, Jayaraman V. Studying sensorimotor processing with physiology in behaving Drosophila. International Review of Neurobiology. 99: 169-89. PMID 21906540 DOI: 10.1016/B978-0-12-387003-2.00007-0  0.65
2011 Huston SJ, Jayaraman V. Studying sensorimotor integration in insects. Current Opinion in Neurobiology. 21: 527-34. PMID 21705212 DOI: 10.1016/j.conb.2011.05.030  0.642
2011 Seelig JD, Chiappe ME, Lott GK, Dutta A, Osborne JE, Reiser MB, Jayaraman V. Erratum: Corrigendum: Two-photon calcium imaging from head-fixed Drosophila during optomotor walking behavior Nature Methods. 8: 184-184. DOI: 10.1038/Nmeth0211-184B  0.568
2011 Seelig JD, Chiappe ME, Lott GK, Reiser MB, Jayaraman V. Calcium Imaging in Drosophila During Walking and Flight Behavior Biophysical Journal. 100: 97a. DOI: 10.1016/j.bpj.2010.12.735  0.652
2010 Chiappe ME, Seelig JD, Reiser MB, Jayaraman V. Walking modulates speed sensitivity in Drosophila motion vision. Current Biology : Cb. 20: 1470-5. PMID 20655222 DOI: 10.1016/j.cub.2010.06.072  0.626
2010 Seelig JD, Chiappe ME, Lott GK, Dutta A, Osborne JE, Reiser MB, Jayaraman V. Two-photon calcium imaging from head-fixed Drosophila during optomotor walking behavior. Nature Methods. 7: 535-40. PMID 20526346 DOI: 10.1038/Nmeth.1468  0.631
2009 Tian L, Hires SA, Mao T, Huber D, Chiappe ME, Chalasani SH, Petreanu L, Akerboom J, McKinney SA, Schreiter ER, Bargmann CI, Jayaraman V, Svoboda K, Looger LL. Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators. Nature Methods. 6: 875-81. PMID 19898485 DOI: 10.1038/Nmeth.1398  0.394
2007 Jayaraman V, Laurent G. Evaluating a genetically encoded optical sensor of neural activity using electrophysiology in intact adult fruit flies. Frontiers in Neural Circuits. 1: 3. PMID 18946545 DOI: 10.3389/neuro.04.003.2007  0.637
2006 Broome BM, Jayaraman V, Laurent G. Encoding and decoding of overlapping odor sequences. Neuron. 51: 467-82. PMID 16908412 DOI: 10.1016/J.Neuron.2006.07.018  0.756
2003 Stopfer M, Jayaraman V, Laurent G. Intensity versus identity coding in an olfactory system. Neuron. 39: 991-1004. PMID 12971898 DOI: 10.1016/j.neuron.2003.08.011  0.732
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