| Year |
Citation |
Score |
| 2024 |
Guerrero-Bustamante CA, Hatfull GF. Bacteriophage tRNA-dependent lysogeny: requirement of phage-encoded tRNA genes for establishment of lysogeny. Mbio. 15: e0326023. PMID 38236026 DOI: 10.1128/mbio.03260-23 |
0.383 |
|
| 2023 |
Podgorski JM, Podgorski J, Abad L, Jacobs-Sera D, Freeman KG, Brown C, Hatfull G, Luque A, White SJ. A novel stabilization mechanism accommodating genome length variation in evolutionarily related viral capsids. Biorxiv : the Preprint Server For Biology. PMID 37961133 DOI: 10.1101/2023.11.03.565530 |
0.323 |
|
| 2023 |
Gauthier CH, Hatfull GF. PhamClust: a phage genome clustering tool using proteomic equivalence. Msystems. 8: e0044323. PMID 37791778 DOI: 10.1128/msystems.00443-23 |
0.303 |
|
| 2023 |
Abad L, Gauthier CH, Florian I, Jacobs-Sera D, Hatfull GF. The heterogenous and diverse population of prophages in genomes. Msystems. e0044623. PMID 37791767 DOI: 10.1128/msystems.00446-23 |
0.424 |
|
| 2023 |
LaBianca K, Butura J, McKnight A, Pan K, Whelan S, Punska E, Pause R, Igbinosa B, Ribbe A, Chien P, Russell D, Garlena R, Hatfull G, Jacobs-Sera D, Rocheleau J. Complete genome sequence of phi29-like podovirus phage PineapplePizza. Microbiology Resource Announcements. e0047823. PMID 37671874 DOI: 10.1128/MRA.00478-23 |
0.364 |
|
| 2023 |
Hurst-Hess K, Walz A, Yang Y, McGuirk H, Gonzalez-Juarrero M, Hatfull GF, Ghosh P, Ojha AK. Intrapulmonary Treatment with Mycobacteriophage LysB Rapidly Reduces Mycobacterium abscessus Burden. Antimicrobial Agents and Chemotherapy. e0016223. PMID 37154689 DOI: 10.1128/aac.00162-23 |
0.78 |
|
| 2022 |
Feiss M, Young R, Ramsey J, Adhya S, Georgopoulos C, Hendrix RW, Hatfull GF, Gilcrease EB, Casjens SR. Hybrid Vigor: Importance of Hybrid λ Phages in Early Insights in Molecular Biology. Microbiology and Molecular Biology Reviews : Mmbr. e0012421. PMID 36165780 DOI: 10.1128/mmbr.00124-21 |
0.403 |
|
| 2022 |
Gauthier CH, Cresawn SG, Hatfull GF. PhaMMseqs: A new pipeline for constructing phage gene phamilies using MMseqs2. G3 (Bethesda, Md.). PMID 36161315 DOI: 10.1093/g3journal/jkac233 |
0.758 |
|
| 2022 |
Hatfull GF. Mycobacteriophages: From Petri dish to patient. Plos Pathogens. 18: e1010602. PMID 35797343 DOI: 10.1371/journal.ppat.1010602 |
0.365 |
|
| 2022 |
Gauthier CH, Abad L, Venbakkam AK, Malnak J, Russell DA, Hatfull GF. DEPhT: a novel approach for efficient prophage discovery and precise extraction. Nucleic Acids Research. PMID 35451479 DOI: 10.1093/nar/gkac273 |
0.344 |
|
| 2022 |
Feiss M, Adhya S, Georgopoulos C, Hendrix RW, Hatfull GF, Gilcrease EB, Casjens SR, Ramsey J, Young R. Complete Genome Sequences of Lambdoid Phages 21, 434, and 434B and Several Lambda Hybrids. Microbiology Resource Announcements. e0012022. PMID 35412353 DOI: 10.1128/mra.00120-22 |
0.353 |
|
| 2021 |
Dedrick RM, Aull HG, Jacobs-Sera D, Garlena RA, Russell DA, Smith BE, Mahalingam V, Abad L, Gauthier CH, Hatfull GF. The Prophage and Plasmid Mobilome as a Likely Driver of Mycobacterium abscessus Diversity. Mbio. 12. PMID 33785627 DOI: 10.1128/mBio.03441-20 |
0.357 |
|
| 2021 |
Amarh ED, Gauthier CH, Dedrick RM, Garlena RA, Russell DA, Jacobs-Sera D, Zack KM, Hatfull GF. Genome Sequence of Mycobacterium abscessus Phage phiT45-1. Microbiology Resource Announcements. 10. PMID 33707330 DOI: 10.1128/MRA.00155-21 |
0.3 |
|
| 2021 |
Zaworski J, McClung C, Ruse C, Weigele PR, Hendrix RW, Ko CC, Edgar R, Hatfull GF, Casjens SR, Raleigh EA. Genome analysis of Salmonella enterica serovar Typhimurium bacteriophage L, indicator for StySA (StyLT2III) restriction-modification system action. G3 (Bethesda, Md.). 11. PMID 33561243 DOI: 10.1093/g3journal/jkaa037 |
0.366 |
|
| 2021 |
Amarh ED, Dedrick RM, Garlena RA, Russell DA, Jacobs-Sera D, Hatfull GF. Genome Sequence of Mycobacterium abscessus Phage phiT46-1. Microbiology Resource Announcements. 10. PMID 33446600 DOI: 10.1128/MRA.01421-20 |
0.307 |
|
| 2020 |
Mavrich TN, Gauthier C, Abad L, Bowman CA, Cresawn SG, Hatfull GF. pdm_utils: a SEA-PHAGES MySQL phage database management toolkit. Bioinformatics (Oxford, England). PMID 33226064 DOI: 10.1093/bioinformatics/btaa983 |
0.735 |
|
| 2020 |
Hatfull GF. Actinobacteriophages: Genomics, Dynamics, and Applications. Annual Review of Virology. 7: 37-61. PMID 32991269 DOI: 10.1146/annurev-virology-122019-070009 |
0.384 |
|
| 2020 |
Ko CC, Hatfull GF. Identification of mycobacteriophage toxic genes reveals new features of mycobacterial physiology and morphology. Scientific Reports. 10: 14670. PMID 32887931 DOI: 10.1038/S41598-020-71588-5 |
0.404 |
|
| 2020 |
Jacobs-Sera D, Abad LA, Alvey RM, Anders KR, Aull HG, Bhalla SS, Blumer LS, Bollivar DW, Bonilla JA, Butela KA, Coomans RJ, Cresawn SG, D'Elia T, Diaz A, Divens AM, ... ... Hatfull GF, et al. Genomic diversity of bacteriophages infecting Microbacterium spp. Plos One. 15: e0234636. PMID 32555720 DOI: 10.1371/Journal.Pone.0234636 |
0.777 |
|
| 2020 |
Wetzel KS, Aull HG, Zack KM, Garlena RA, Hatfull GF. Protein-Mediated and RNA-Based Origins of Replication of Extrachromosomal Mycobacterial Prophages. Mbio. 11. PMID 32209683 DOI: 10.1128/Mbio.00385-20 |
0.46 |
|
| 2020 |
Pope WH, Butela KA, Garlena RA, Jacobs-Sera D, Russell DA, Warner MH, Hatfull GF. Genome Sequences of 20 Bacteriophages Isolated on Gordonia terrae. Microbiology Resource Announcements. 9. PMID 31948974 DOI: 10.1128/MRA.01489-19 |
0.351 |
|
| 2019 |
Hutinet G, Kot W, Cui L, Hillebrand R, Balamkundu S, Gnanakalai S, Neelakandan R, Carstens AB, Fa Lui C, Tremblay D, Jacobs-Sera D, Sassanfar M, Lee YJ, Weigele P, Moineau S, ... Hatfull GF, et al. 7-Deazaguanine modifications protect phage DNA from host restriction systems. Nature Communications. 10: 5442. PMID 31784519 DOI: 10.1038/S41467-019-13384-Y |
0.45 |
|
| 2019 |
Mavrich TN, Hatfull GF. Evolution of Superinfection Immunity in Cluster A Mycobacteriophages. Mbio. 10. PMID 31164468 DOI: 10.1128/Mbio.00971-19 |
0.343 |
|
| 2019 |
Oliveira H, Sampaio M, Melo LDR, Dias O, Pope WH, Hatfull GF, Azeredo J. Staphylococci phages display vast genomic diversity and evolutionary relationships. Bmc Genomics. 20: 357. PMID 31072320 DOI: 10.1186/S12864-019-5647-8 |
0.5 |
|
| 2019 |
Dedrick RM, Guerrero-Bustamante CA, Garlena RA, Russell DA, Ford K, Harris K, Gilmour KC, Soothill J, Jacobs-Sera D, Schooley RT, Hatfull GF, Spencer H. Engineered bacteriophages for treatment of a patient with a disseminated drug-resistant Mycobacterium abscessus. Nature Medicine. 25: 730-733. PMID 31068712 DOI: 10.1038/S41591-019-0437-Z |
0.326 |
|
| 2019 |
Dedrick RM, Guerrero Bustamante CA, Garlena RA, Pinches RS, Cornely K, Hatfull GF. Mycobacteriophage ZoeJ: A broad host-range close relative of mycobacteriophage TM4. Tuberculosis (Edinburgh, Scotland). 115: 14-23. PMID 30948168 DOI: 10.1016/J.Tube.2019.01.002 |
0.399 |
|
| 2019 |
Gentile GM, Wetzel KS, Dedrick RM, Montgomery MT, Garlena RA, Jacobs-Sera D, Hatfull GF. More Evidence of Collusion: a New Prophage-Mediated Viral Defense System Encoded by Mycobacteriophage Sbash. Mbio. 10. PMID 30890613 DOI: 10.1128/Mbio.00196-19 |
0.435 |
|
| 2019 |
Montgomery MT, Guerrero Bustamante CA, Dedrick RM, Jacobs-Sera D, Hatfull GF. Yet More Evidence of Collusion: a New Viral Defense System Encoded by Phage CarolAnn. Mbio. 10. PMID 30890601 DOI: 10.1128/Mbio.02417-18 |
0.413 |
|
| 2019 |
Russell DA, Garlena RA, Hatfull GF. Complete Genome Sequence of Microbacterium foliorum NRRL B-24224, a Host for Bacteriophage Discovery. Microbiology Resource Announcements. 8. PMID 30714032 DOI: 10.1128/MRA.01467-18 |
0.352 |
|
| 2019 |
Iles KS, Zack KM, Betsko AJ, Garlena RA, Russell DA, Fetters A, Jacobs-Sera D, Ashman TL, Hatfull GF. Genome Sequences of Three Phages Isolated from Flowers. Microbiology Resource Announcements. 8. PMID 30637400 DOI: 10.1128/MRA.01468-18 |
0.332 |
|
| 2019 |
Marinelli LJ, Piuri M, Hatfull GF. Genetic Manipulation of Lytic Bacteriophages with BRED: Bacteriophage Recombineering of Electroporated DNA. Methods in Molecular Biology (Clifton, N.J.). 1898: 69-80. PMID 30570724 DOI: 10.1007/978-1-4939-8940-9_6 |
0.813 |
|
| 2019 |
Piuri M, Hatfull GF. Fluoromycobacteriophages for Drug Susceptibility Testing (DST) of Mycobacteria. Methods in Molecular Biology (Clifton, N.J.). 1898: 27-36. PMID 30570720 DOI: 10.1007/978-1-4939-8940-9_2 |
0.702 |
|
| 2018 |
Carstens AB, Djurhuus AM, Kot W, Jacobs-Sera D, Hatfull GF, Hansen LH. Unlocking the Potential of 46 New Bacteriophages for Biocontrol of . Viruses. 10. PMID 30423804 DOI: 10.3390/V10110621 |
0.354 |
|
| 2018 |
Mavrich TN, Casey E, Oliveira J, Bottacini F, James K, Franz CMAP, Lugli GA, Neve H, Ventura M, Hatfull GF, Mahony J, van Sinderen D. Characterization and induction of prophages in human gut-associated Bifidobacterium hosts. Scientific Reports. 8: 12772. PMID 30143740 DOI: 10.1038/S41598-018-31181-3 |
0.408 |
|
| 2018 |
Rondón L, Urdániz E, Latini C, Payaslian F, Matteo M, Sosa EJ, Do Porto DF, Turjanski AG, Nemirovsky S, Hatfull GF, Poggi S, Piuri M. Fluoromycobacteriophages Can Detect Viable and Determine Phenotypic Rifampicin Resistance in 3-5 Days From Sputum Collection. Frontiers in Microbiology. 9: 1471. PMID 30026735 DOI: 10.3389/Fmicb.2018.01471 |
0.714 |
|
| 2018 |
Cheng L, Marinelli LJ, Grosset N, Fitz-Gibbon ST, Bowman CA, Dang BQ, Russell DA, Jacobs-Sera D, Shi B, Pellegrini M, Miller JF, Gautier M, Hatfull GF, Modlin RL. Complete genomic sequences of Propionibacterium freudenreichii phages from Swiss cheese reveal greater diversity than Cutibacterium (formerly Propionibacterium) acnes phages. Bmc Microbiology. 18: 19. PMID 29490612 DOI: 10.1186/S12866-018-1159-Y |
0.818 |
|
| 2018 |
Ko CC, Hatfull GF. Mycobacteriophage Fruitloop gp52 inactivates Wag31 (DivIVA) to prevent heterotypic superinfection. Molecular Microbiology. PMID 29488662 DOI: 10.1111/Mmi.13946 |
0.423 |
|
| 2018 |
Casjens SR, Hatfull GF. Roger Hendrix: Gentle Provocateur. Journal of Bacteriology. PMID 29463602 DOI: 10.1128/Jb.00058-18 |
0.351 |
|
| 2018 |
Klyczek KK, Jacobs-Sera D, Adair TL, Adams SD, Ball SL, Benjamin RC, Bonilla JA, Breitenberger CA, Daniels CJ, Gaffney BL, Harrison M, Hughes LE, King RA, Krukonis GP, Lopez AJ, ... ... Hatfull GF, et al. Complete Genome Sequences of 44Phages. Genome Announcements. 6. PMID 29437090 DOI: 10.1128/Genomea.01474-17 |
0.761 |
|
| 2018 |
Hughes LE, Shaffer CD, Ware VC, Aguayo I, Aziz RM, Bhuiyan S, Bindert IS, Calovich-Benne CK, Chapman J, Donegan-Quick R, Farooq A, Garcia C, Graham LH, Green BY, Kenna MA, ... ... Hatfull GF, et al. Eight Genome Sequences of Cluster BE1 Phages That Infect Streptomyces Species. Genome Announcements. 6. PMID 29326201 DOI: 10.1128/Genomea.01146-17 |
0.738 |
|
| 2018 |
Doyle EL, Fillman CL, Reyna NS, Tobiason DM, Westholm DE, Askins JL, Backus BP, Baker AC, Ballard HS, Bisesi PJ, Bond L, Byrnes D, Carlstedt H, Dodson KS, Fallert MJ, ... ... Hatfull GF, et al. Genome Sequences of Four Cluster P Mycobacteriophages. Genome Announcements. 6. PMID 29326199 DOI: 10.1128/Genomea.01101-17 |
0.741 |
|
| 2017 |
Anders KR, Barekzi N, Best AA, Frederick GD, Mavrodi DV, Vazquez E, Amoh NYA, Baliraine FN, Buchser WJ, Cast TP, Chamberlain CE, Chung HM, D'Angelo WA, Farris CT, ... ... Hatfull GF, et al. Genome Sequences of Mycobacteriophages Amgine, Amohnition, Bella96, Cain, DarthP, Hammy, Krueger, LastHope, Peanam, PhelpsODU, Phrank, SirPhilip, Slimphazie, and Unicorn. Genome Announcements. 5. PMID 29217790 DOI: 10.1128/Genomea.01202-17 |
0.751 |
|
| 2017 |
Bonilla JA, Isern S, Findley AM, Klyczek KK, Michael SF, Saha MS, Buchser WJ, Forsyth MH, Paudel S, Gissendanner CR, Wiedemeier AMD, Alonzo FL, ... ... Hatfull GF, et al. Genome Sequences of 19 Rhodococcus erythropolis Cluster CA Phages. Genome Announcements. 5. PMID 29217789 DOI: 10.1128/Genomea.01201-17 |
0.74 |
|
| 2017 |
Hanauer DI, Graham MJ, Betancur L, Bobrownicki A, Cresawn SG, Garlena RA, Jacobs-Sera D, Kaufmann N, Pope WH, Russell DA, Jacobs WR, Sivanathan V, Asai DJ, Hatfull GF. An inclusive Research Education Community (iREC): Impact of the SEA-PHAGES program on research outcomes and student learning. Proceedings of the National Academy of Sciences of the United States of America. 114: 13531-13536. PMID 29208718 DOI: 10.1073/Pnas.1718188115 |
0.663 |
|
| 2017 |
Dedrick RM, Mavrich TN, Ng WL, Hatfull GF. Expression and evolutionary patterns of mycobacteriophage D29 and its temperate close relatives. Bmc Microbiology. 17: 225. PMID 29197343 DOI: 10.1186/S12866-017-1131-2 |
0.327 |
|
| 2017 |
Mehla J, Dedrick RM, Caufield JH, Wagemans J, Sakhawalkar N, Johnson A, Hatfull GF, Uetz P. Virus-host protein-protein interactions of mycobacteriophage Giles. Scientific Reports. 7: 16514. PMID 29184079 DOI: 10.1038/S41598-017-16303-7 |
0.302 |
|
| 2017 |
Herren CD, Peister A, Breton TS, Hill MS, Anderson MS, Chang AW, Klein SB, Thornton MM, Vars SJ, Wagner KE, Wiebe PL, Williams TG, Yanez CP, Ackles JM, Artis D, ... ... Hatfull GF, et al. Genome Sequences of Four Subcluster L2 Mycobacterium Phages, Finemlucis, Miley16, Wilder, and Zakai. Genome Announcements. 5. PMID 29146853 DOI: 10.1128/Genomea.01233-17 |
0.752 |
|
| 2017 |
Chung HM, D'Elia T, Ross JF, Alvarado SM, Brantley MC, Bricker LP, Butler CR, Crist C, Dane JM, Farran BW, Hobbs S, Lapak M, Lovell C, Ludergnani N, McMullen A, ... ... Hatfull GF, et al. Complete Genome Sequences of Mycobacteriophages Clautastrophe, Kingsolomon, Krypton555, and Nicholas. Genome Announcements. 5. PMID 29122864 DOI: 10.1128/Genomea.01129-17 |
0.766 |
|
| 2017 |
Saha S, Yan W, Washington JM, Davis WB, Barbazuk WB, Medellin R, Mendez A, Ramos JR, Sadana R, Edmonds M, Feng G, Ilyas M, Kaiser J, Monroe SJ, Pham TV, ... ... Hatfull GF, et al. Genome Sequences of Mycobacteriophages Findley, Hurricane, and TBond007. Genome Announcements. 5. PMID 29122862 DOI: 10.1128/Genomea.01123-17 |
0.735 |
|
| 2017 |
King RA, Slowan-Pomeroy TM, Thomas JE, Ahmed T, Alexander KL, Biddle JM, Daniels MK, Rowlett JR, Senay TE, Rinehart CA, Staples AK, Rowland NS, Gaffney BL, Emmons CB, Hauk MD, ... ... Hatfull GF, et al. Genome Sequences of Subcluster K5 Mycobacteriophages AlleyCat, Edugator, and Guillsminger. Genome Announcements. 5. PMID 29122861 DOI: 10.1128/Genomea.01122-17 |
0.745 |
|
| 2017 |
Adair TL, Stowe E, Pizzorno MC, Krukonis G, Harrison M, Cresawn SG, Garlena RA, Russell DA, Pope WH, Jacobs-Sera D, Hatfull GF. Genome Sequences of Three Cluster AU Arthrobacter Phages, Caterpillar, Nightmare, and Teacup. Genome Announcements. 5. PMID 29122860 DOI: 10.1128/Genomea.01121-17 |
0.739 |
|
| 2017 |
Lee-Soety JY, Bhatt S, Adair TL, Bonilla JA, Klyczek KK, Harrison M, Garlena RA, Bowman CA, Russell DA, Pope WH, Jacobs-Sera D, ... ... Hatfull GF, et al. Genome Sequences of 12 Cluster AN Arthrobacter Phages. Genome Announcements. 5. PMID 29122859 DOI: 10.1128/Genomea.01092-17 |
0.747 |
|
| 2017 |
Edgington NP, Voshell SM, Ware VC, Akoto FF, Alhout AA, Atwal GJ, Balyozian JB, Cadieux ZA, Chop BM, Cresawn SG, Cudkevich N, Faltine-Gonzalez DZ, Garlena RA, Gilmer BJ, Graham LH, ... ... Hatfull GF, et al. Genome Sequences of Chancellor, Mitti, and Wintermute, Three Subcluster K4 Phages Isolated Using Mycobacterium smegmatis mc(2)155. Genome Announcements. 5. PMID 29122858 DOI: 10.1128/Genomea.01070-17 |
0.742 |
|
| 2017 |
Adair TL, Bonilla JA, Klyczek KK, Lee-Soety JY, Rosas-Acosta G, Harrison M, Bowman CA, Cresawn SG, Garlena RA, Russell DA, ... ... Hatfull GF, et al. Complete Genome Sequences of Arthrobacter Phages Beans, Franzy, Jordan, Piccoletto, Shade, and Timinator. Genome Announcements. 5. PMID 29097454 DOI: 10.1128/Genomea.01094-17 |
0.769 |
|
| 2017 |
Butela KA, Gurney SMR, Hendrickson HL, LeBlanc-Straceski JM, Zimmerman AM, Conant SB, Freed NE, Silander OK, Thomson JJ, Berkes CA, Bertolez C, Davies CG, Elinsky A, Hanlon AJ, Nersesyan J, ... ... Hatfull GF, et al. Complete Genome Sequences of Cluster A Mycobacteriophages BobSwaget, Fred313, KADY, Lokk, MyraDee, Stagni, and StepMih. Genome Announcements. 5. PMID 29074662 DOI: 10.1128/Genomea.01182-17 |
0.714 |
|
| 2017 |
Pope WH, Mavrich TN, Garlena RA, Guerrero-Bustamante CA, Jacobs-Sera D, Montgomery MT, Russell DA, Warner MH, Hatfull GF. Bacteriophages of Gordonia spp. Display a Spectrum of Diversity and Genetic Relationships. Mbio. 8. PMID 28811342 DOI: 10.1128/Mbio.01069-17 |
0.513 |
|
| 2017 |
Jacobs-Sera D, Catinas O, Fernandez-Martinez M, Garcia A, Garlena RA, Guerrero Bustamante CA, Larsen MH, Medellin RH, Melendez-Ortiz MY, Melendez-Rivera CM, Mercado-Andino AK, Mercado-Delgado AJ, Ortiz-Ortiz CP, Quesada-Gordillo AM, Ramos JM, ... ... Hatfull GF, et al. Genome Sequences of Mycobacteriophages Kerberos, Pomar16, and StarStuff. Genome Announcements. 5. PMID 28798169 DOI: 10.1128/Genomea.00690-17 |
0.44 |
|
| 2017 |
Klyczek KK, Bonilla JA, Jacobs-Sera D, Adair TL, Afram P, Allen KG, Archambault ML, Aziz RM, Bagnasco FG, Ball SL, Barrett NA, Benjamin RC, Blasi CJ, Borst K, Braun MA, ... ... Hatfull GF, et al. Tales of diversity: Genomic and morphological characteristics of forty-six Arthrobacter phages. Plos One. 12: e0180517. PMID 28715480 DOI: 10.1371/Journal.Pone.0180517 |
0.499 |
|
| 2017 |
Fleischacker CL, Segura-Totten M, Garlena RA, Jacobs-Sera D, Pope WH, Russell DA, Hatfull GF. Genome Sequence of Mycobacterium Phage CrystalP. Genome Announcements. 5. PMID 28705967 DOI: 10.1128/Genomea.00542-17 |
0.494 |
|
| 2017 |
Mavrich TN, Hatfull GF. Bacteriophage evolution differs by host, lifestyle and genome. Nature Microbiology. 2: 17112. PMID 28692019 DOI: 10.1038/Nmicrobiol.2017.112 |
0.451 |
|
| 2017 |
Russell DA, Hatfull GF. PhagesDB: the actinobacteriophage database. Bioinformatics (Oxford, England). 33: 784-786. PMID 28365761 DOI: 10.1093/Bioinformatics/Btw711 |
0.402 |
|
| 2017 |
Dedrick RM, Jacobs-Sera D, Bustamante CA, Garlena RA, Mavrich TN, Pope WH, Reyes JC, Russell DA, Adair T, Alvey R, Bonilla JA, Bricker JS, Brown BR, Byrnes D, Cresawn SG, ... ... Hatfull GF, et al. Prophage-mediated defence against viral attack and viral counter-defence. Nature Microbiology. 2: 16251. PMID 28067906 DOI: 10.1038/Nmicrobiol.2016.251 |
0.748 |
|
| 2017 |
Pope WH, Montgomery MT, Bonilla JA, Dejong R, Garlena RA, Guerrero Bustamante C, Klyczek KK, Russell DA, Wertz JT, Jacobs-Sera D, Hatfull GF. Complete Genome Sequences of 38 Gordonia sp. Bacteriophages. Genome Announcements. 5. PMID 28057748 DOI: 10.1128/Genomea.01143-16 |
0.487 |
|
| 2016 |
Mills ML, Bragg J, Bruce A, Dehn A, Drouin J, Hefner M, Katon D, McHugh D, Zeba F, Bowman CA, Cresawn SG, Jacobs-Sera D, Russell DA, Pope WH, Hatfull GF, et al. Genome Sequences of Newly Isolated Mycobacteriophages Forming Cluster S. Genome Announcements. 4. PMID 27688332 DOI: 10.1128/Genomea.00933-16 |
0.737 |
|
| 2016 |
Russell DA, Guerrero Bustamante CA, Garlena RA, Hatfull GF. Complete Genome Sequence of Gordonia terrae 3612. Genome Announcements. 4. PMID 27688316 DOI: 10.1128/Genomea.01058-16 |
0.453 |
|
| 2016 |
Mayer O, Jain P, Weisbrod T, Biro D, Ho L, Jacobs-Sera D, Hatfull GF, Jacobs WR. Fluorescent reporter DS6A mycobacteriophages reveal unique variations in infectability and phage production in mycobacteria. Journal of Bacteriology. PMID 27672191 DOI: 10.1128/Jb.00592-16 |
0.43 |
|
| 2016 |
Keenholtz RA, Grindley ND, Hatfull GF, Marko JF. Crossover-site sequence and DNA torsional stress control strand interchanges by the Bxb1 site-specific serine recombinase. Nucleic Acids Research. PMID 27550179 DOI: 10.1093/Nar/Gkw724 |
0.629 |
|
| 2016 |
Pope WH, Anderson KC, Arora C, Bortz ME, Burnet G, Conover DH, D'Incau GM, Ghobrial JA, Jonas AL, Migdal EJ, Rote NL, German BA, McDonnell JE, Mezghani N, Schafer CE, ... ... Hatfull GF, et al. Genome Sequences of Gordonia terrae Bacteriophages Phinally and Vivi2. Genome Announcements. 4. PMID 27540050 DOI: 10.1128/Genomea.00599-16 |
0.465 |
|
| 2016 |
Pope WH, Bandla S, Colbert AK, Eichinger FG, Gamburg MB, Horiates SG, Jamison JM, Julian DR, Moore WA, Murthy P, Powell MC, Smith SV, Mezghani N, Milliken KA, Thompson PK, ... ... Hatfull GF, et al. Genome Sequences of Gordonia Phages BaxterFox, Kita, Nymphadora, and Yeezy. Genome Announcements. 4. PMID 27516501 DOI: 10.1128/Genomea.00600-16 |
0.432 |
|
| 2016 |
Pope WH, Davis JP, O'Shea S, Pfeiffer AC, Rich AN, Xue JC, Shedlock KA, Stanton AC, Furbee EC, Grubb SR, Warner MH, Montgomery MT, Garlena RA, Russell DA, Jacobs-Sera D, ... Hatfull GF, et al. Genome Sequences of Gordonia Phages Hotorobo, Woes, and Monty. Genome Announcements. 4. PMID 27516500 DOI: 10.1128/Genomea.00598-16 |
0.47 |
|
| 2016 |
Pope WH, Guido MJ, Iyengar P, Nigra JT, Serbin MB, Kasturiarachi NS, Pressimone CA, Schiebel JG, Furbee EC, Grubb SR, Warner MH, Montgomery MT, Garlena RA, Russell DA, Jacobs-Sera D, ... Hatfull GF, et al. Genome Sequence of Gordonia Phage Emalyn. Genome Announcements. 4. PMID 27516499 DOI: 10.1128/Genomea.00597-16 |
0.507 |
|
| 2016 |
Montgomery MT, Pope WH, Arnold ZM, Basina A, Iyer AM, Stoner TH, Kasturiarachi NS, Pressimone CA, Schiebel JG, Furbee EC, Grubb SR, Warner MH, Garlena RA, Russell DA, Jacobs-Sera D, ... Hatfull GF, et al. Genome Sequences of Gordonia Phages Bowser and Schwabeltier. Genome Announcements. 4. PMID 27516498 DOI: 10.1128/Genomea.00596-16 |
0.508 |
|
| 2016 |
Pope WH, Berryman EN, Forrest KM, McHale L, Wertz AT, Zhuang Z, Kasturiarachi NS, Pressimone CA, Schiebel JG, Furbee EC, Grubb SR, Warner MH, Montgomery MT, Garlena RA, Russell DA, ... ... Hatfull GF, et al. Genome Sequence of Gordonia Phage BetterKatz. Genome Announcements. 4. PMID 27516497 DOI: 10.1128/Genomea.00590-16 |
0.465 |
|
| 2016 |
Dieterle ME, Fina Martin J, Durán R, Nemirovsky SI, Sanchez Rivas C, Bowman C, Russell D, Hatfull GF, Cambillau C, Piuri M. Characterization of prophages containing "evolved" Dit/Tal modules in the genome of Lactobacillus casei BL23. Applied Microbiology and Biotechnology. PMID 27448399 DOI: 10.1007/S00253-016-7727-X |
0.766 |
|
| 2016 |
Pope WH, Bandyopadhyay A, Carlton ML, Kane MT, Panchal NJ, Pham YC, Reynolds ZJ, Sapienza MS, German BA, McDonnell JE, Schafer CE, Yu VJ, Furbee EC, Grubb SR, Warner MH, ... ... Hatfull GF, et al. Genome Sequence of Gordonia Phage Yvonnetastic. Genome Announcements. 4. PMID 27389265 DOI: 10.1128/Genomea.00594-16 |
0.482 |
|
| 2016 |
Hatfull GF. Complete Genome Sequences of 61 Mycobacteriophages. Genome Announcements. 4. PMID 27389257 DOI: 10.1128/Genomea.00389-16 |
0.47 |
|
| 2016 |
Pope WH, Akbar AF, Ayers TN, Belohoubek SG, Chung CF, Hartman AC, Kayiti T, Kessler CM, Koman PI, Kotovskiy GA, Morgan TM, Rohac RM, Silva GM, Willis CE, Milliken KA, ... ... Hatfull GF, et al. Genome Sequences of Gordonia Bacteriophages Obliviate, UmaThurman, and Guacamole. Genome Announcements. 4. PMID 27365348 DOI: 10.1128/Genomea.00595-16 |
0.469 |
|
| 2016 |
Pope WH, Biery DN, Huff ZT, Huynh AB, McFadden WM, Mouat JS, Schneiderman SE, Song H, Szpak LE, Umbaugh MS, German BA, McDonnell JE, Mezghani N, Schafer CE, Thompson PK, ... ... Hatfull GF, et al. Genome Sequences of Gordonia terrae Phages Attis and SoilAssassin. Genome Announcements. 4. PMID 27365347 DOI: 10.1128/Genomea.00591-16 |
0.447 |
|
| 2016 |
Pope WH, Brown AK, Fisher DJ, Okwiya NH, Savage KA, German BA, McDonnell JE, Schafer CE, Yu VJ, Furbee EC, Grubb SR, Warner MH, Montgomery MT, Garlena RA, Russell DA, ... ... Hatfull GF, et al. Genome Sequence of Gordonia Bacteriophage Lucky10. Genome Announcements. 4. PMID 27365346 DOI: 10.1128/Genomea.00580-16 |
0.478 |
|
| 2016 |
Pope WH, Benczkowski MS, Green DE, Hwang M, Kennedy B, Kocak B, Kruczek E, Lin L, Moretti ML, Onelangsy FL, Mezghani N, Milliken KA, Toner CL, Thompson PK, Ulbrich MC, ... ... Hatfull GF, et al. Genome Sequences of Gordonia terrae Phages Benczkowski14 and Katyusha. Genome Announcements. 4. PMID 27340062 DOI: 10.1128/Genomea.00578-16 |
0.47 |
|
| 2016 |
Lima-Junior JD, Viana-Niero C, Conde Oliveira DV, Machado GE, Rabello MC, Martins-Junior J, Martins LF, Digiampietri LA, da Silva AM, Setubal JC, Russell DA, Jacobs-Sera D, Pope WH, Hatfull GF, Leão SC. Characterization of mycobacteria and mycobacteriophages isolated from compost at the São Paulo Zoo Park Foundation in Brazil and creation of the new mycobacteriophage Cluster U. Bmc Microbiology. 16: 111. PMID 27316672 DOI: 10.1186/S12866-016-0734-3 |
0.409 |
|
| 2016 |
Bollivar DW, Bernardoni B, Bockman MR, Miller BM, Russell DA, Delesalle VA, Krukonis GP, Hatfull GF, Cross MR, Szewczyk MM, Eppurath A. Complete Genome Sequences of Five Bacteriophages That Infect Rhodobacter capsulatus. Genome Announcements. 4. PMID 27231352 DOI: 10.1128/Genomea.00051-16 |
0.448 |
|
| 2016 |
Dedrick RM, Mavrich TN, Ng WL, Cervantes Reyes JC, Olm MR, Rush RE, Jacobs-Sera D, Russell DA, Hatfull GF. Function, expression, specificity, diversity, and incompatibility of actinobacteriophage parABS systems. Molecular Microbiology. PMID 27146086 DOI: 10.1111/Mmi.13414 |
0.533 |
|
| 2016 |
Lunt BL, Hatfull GF. Brujita Integrase: A simple, arm-less, directionless, and promiscuous tyrosine integrase system. Journal of Molecular Biology. PMID 27113630 DOI: 10.1016/J.Jmb.2016.04.023 |
0.799 |
|
| 2016 |
Russell DA, Hatfull GF. Complete Genome Sequence of Arthrobacter sp. ATCC 21022, a Host for Bacteriophage Discovery. Genome Announcements. 4. PMID 27013048 DOI: 10.1128/Genomea.00168-16 |
0.45 |
|
| 2016 |
Urdániz E, Rondón L, Martí MA, Hatfull GF, Piuri M. Rapid Whole-Cell Assay of Antitubercular Drugs Using Second-Generation Fluoromycobacteriophages. Antimicrobial Agents and Chemotherapy. 60: 3253-6. PMID 26976860 DOI: 10.1128/Aac.03016-15 |
0.675 |
|
| 2016 |
Hatfull GF. In the Trenches of Microbial Warfare: Identification of Genes and Pathways Contributing to Bacteriophage Infection by Quantitative Selection Analysis. Journal of Molecular Biology. 428: 413-5. PMID 26724536 DOI: 10.1016/J.Jmb.2015.12.016 |
0.329 |
|
| 2015 |
Ojha AK, Jacobs WR, Hatfull GF. Erratum to: Genetic Dissection of Mycobacterial Biofilms. Methods in Molecular Biology (Clifton, N.J.). 1285: E1. PMID 28197986 DOI: 10.1007/978-1-4939-2450-9_25 |
0.682 |
|
| 2015 |
Pope WH, Hatfull GF. Adding pieces to the puzzle: New insights into bacteriophage diversity from integrated research-education programs. Bacteriophage. 5: e1084073. PMID 26904380 DOI: 10.1080/21597081.2015.1084073 |
0.326 |
|
| 2015 |
Villanueva VM, Oldfield LM, Hatfull GF. An Unusual Phage Repressor Encoded by Mycobacteriophage BPs. Plos One. 10: e0137187. PMID 26332854 DOI: 10.1371/Journal.Pone.0137187 |
0.811 |
|
| 2015 |
Pope WH, Bina EA, Brahme IS, Hill AB, Himmelstein PH, Hunsicker SM, Ish AR, Le TS, Martin MM, Moscinski CN, Shetty SA, Swierzewski T, Iyengar VB, Kim H, Schafer CE, ... ... Hatfull GF, et al. Genome Sequence of Mycobacteriophage Momo. Genome Announcements. 3. PMID 26089415 DOI: 10.1128/Genomea.00601-15 |
0.491 |
|
| 2015 |
Pope WH, Ahmed T, Drobitch MK, Early DR, Eljamri S, Kasturiarachi NS, Klonicki EF, Manjooran DT, Ní Chochlain AN, Puglionesi AO, Rajakumar V, Shindle KA, Tran MT, Brown BR, Churilla BM, ... ... Hatfull GF, et al. Genome Sequences of Mycobacteriophages Luchador and Nerujay. Genome Announcements. 3. PMID 26089414 DOI: 10.1128/Genomea.00599-15 |
0.379 |
|
| 2015 |
Pope WH, Jacobetz E, Johnson CA, Kihle BL, Sobeski MA, Werner MB, Adkins NL, Kramer ZJ, Montgomery MT, Grubb SR, Warner MH, Bowman CA, Russell DA, Hatfull GF. Genome Sequence of Mycobacteriophage Phayonce. Genome Announcements. 3. PMID 26089413 DOI: 10.1128/Genomea.00598-15 |
0.465 |
|
| 2015 |
Pope WH, Carter JT, Dasher KL, Haynberg MC, Reddi A, Shedlock KA, Lapin JS, Prout AK, Grubb SR, Warner MH, Bowman CA, Russell DA, Hatfull GF. Genome Sequence of a Newly Isolated Mycobacteriophage, ShedlockHolmes. Genome Announcements. 3. PMID 26089412 DOI: 10.1128/Genomea.00597-15 |
0.478 |
|
| 2015 |
Pope WH, Bernstein NI, Fasolas CS, Mezghani N, Pressimone CA, Selvakumar P, Stanton AC, Lapin JS, Prout AK, Grubb SR, Warner MH, Bowman CA, Russell DA, Hatfull GF. Genome Sequence of Mycobacteriophage Mindy. Genome Announcements. 3. PMID 26089411 DOI: 10.1128/genomeA.00596-15 |
0.314 |
|
| 2015 |
Pope WH, Augustine DA, Carroll DC, Duncan JC, Harwi KM, Howry R, Jagessar B, Lum BA, Meinert JW, Migliozzi JS, Milliken KA, Mitchell CJ, Nalatwad AS, Orlandini KC, Rhein MJ, ... ... Hatfull GF, et al. Genome Sequences of Cluster G Mycobacteriophages Cambiare, FlagStaff, and MOOREtheMARYer. Genome Announcements. 3. PMID 26089410 DOI: 10.1128/Genomea.00595-15 |
0.369 |
|
| 2015 |
Pope WH, Carbonara ME, Cioffi HM, Cruz T, Dang BQ, Doyle AN, Fan OH, Gallagher M, Gentile GM, German BA, Farrell ME, Gerwig M, Hunter KL, Lefever VE, Marfisi NA, ... ... Hatfull GF, et al. Genome Sequences of Mycobacteriophages AlanGrant, Baee, Corofin, OrangeOswald, and Vincenzo, New Members of Cluster B. Genome Announcements. 3. PMID 26089409 DOI: 10.1128/Genomea.00586-15 |
0.311 |
|
| 2015 |
Petrova ZO, Broussard GW, Hatfull GF. Mycobacteriophage-repressor-mediated immunity as a selectable genetic marker: Adephagia and BPs repressor selection. Microbiology (Reading, England). 161: 1539-51. PMID 26066798 DOI: 10.1099/Mic.0.000120 |
0.818 |
|
| 2015 |
Hatfull GF. Dark Matter of the Biosphere: the Amazing World of Bacteriophage Diversity. Journal of Virology. 89: 8107-10. PMID 26018169 DOI: 10.1128/Jvi.01340-15 |
0.46 |
|
| 2015 |
Hatfull GF. Innovations in Undergraduate Science Education: Going Viral. Journal of Virology. 89: 8111-3. PMID 26018168 DOI: 10.1128/Jvi.03003-14 |
0.315 |
|
| 2015 |
Mehla J, Dedrick RM, Caufield JH, Siefring R, Mair M, Johnson A, Hatfull GF, Uetz P. The Protein Interactome of Mycobacteriophage Giles Predicts Functions for Unknown Proteins. Journal of Bacteriology. 197: 2508-16. PMID 25986902 DOI: 10.1128/Jb.00164-15 |
0.37 |
|
| 2015 |
Casjens SR, Jacobs-Sera D, Hatfull GF, Hendrix RW. Genome Sequence of Salmonella enterica Phage Det7. Genome Announcements. 3. PMID 25953168 DOI: 10.1128/Genomea.00279-15 |
0.45 |
|
| 2015 |
Pope WH, Bowman CA, Russell DA, Jacobs-Sera D, Asai DJ, Cresawn SG, Jacobs WR, Hendrix RW, Lawrence JG, Hatfull GF. Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity. Elife. 4: e06416. PMID 25919952 DOI: 10.7554/Elife.06416 |
0.762 |
|
| 2015 |
Ojha AK, Jacobs WR, Hatfull GF. Genetic dissection of mycobacterial biofilms. Methods in Molecular Biology (Clifton, N.J.). 1285: 215-26. PMID 25779318 DOI: 10.1007/978-1-4939-2450-9_12 |
0.7 |
|
| 2015 |
Cresawn SG, Pope WH, Jacobs-Sera D, Bowman CA, Russell DA, Dedrick RM, Adair T, Anders KR, Ball S, Bollivar D, Breitenberger C, Burnett SH, Butela K, Byrnes D, Carzo S, ... ... Hatfull GF, et al. Comparative genomics of Cluster O mycobacteriophages. Plos One. 10: e0118725. PMID 25742016 DOI: 10.1371/Journal.Pone.0118725 |
0.749 |
|
| 2015 |
Hendrix RW, Ko CC, Jacobs-Sera D, Hatfull GF, Erhardt M, Hughes KT, Casjens SR. Genome Sequence of Salmonella Phage χ. Genome Announcements. 3. PMID 25720684 DOI: 10.1128/Genomea.01229-14 |
0.458 |
|
| 2015 |
Pope WH, Bowman CA, Russell DA, Jacobs-Sera D, Asai DJ, Cresawn SG, Jacobs WR, Hendrix RW, Lawrence JG, Hatfull GF, Course MG. Author response: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity Elife. DOI: 10.7554/Elife.06416.028 |
0.736 |
|
| 2014 |
Hatfull GF. Molecular Genetics of Mycobacteriophages. Microbiology Spectrum. 2. PMID 26105821 DOI: 10.1128/Microbiolspec.Mgm2-0032-2013 |
0.442 |
|
| 2014 |
Pope WH, Jacobs-Sera D, Russell DA, Rubin DH, Kajee A, Msibi ZN, Larsen MH, Jacobs WR, Lawrence JG, Hendrix RW, Hatfull GF. Genomics and proteomics of mycobacteriophage patience, an accidental tourist in the Mycobacterium neighborhood. Mbio. 5: e02145. PMID 25467442 DOI: 10.1128/Mbio.02145-14 |
0.453 |
|
| 2014 |
Hatfull GF. Molecular Genetics of Mycobacteriophages. Microbiology Spectrum. 2: 1-36. PMID 25328854 |
0.331 |
|
| 2014 |
Dieterle ME, Bowman C, Batthyany C, Lanzarotti E, Turjanski A, Hatfull G, Piuri M. Exposing the secrets of two well-known Lactobacillus casei phages, J-1 and PL-1, by genomic and structural analysis. Applied and Environmental Microbiology. 80: 7107-21. PMID 25217012 DOI: 10.1128/Aem.02771-14 |
0.76 |
|
| 2014 |
Casjens SR, Leavitt JC, Hatfull GF, Hendrix RW. Genome Sequence of Salmonella Phage 9NA. Genome Announcements. 2. PMID 25146133 DOI: 10.1128/genomeA.00531-14 |
0.354 |
|
| 2014 |
Oldfield LM, Hatfull GF. Mutational analysis of the mycobacteriophage BPs promoter PR reveals context-dependent sequences for mycobacterial gene expression. Journal of Bacteriology. 196: 3589-97. PMID 25092027 DOI: 10.1128/Jb.01801-14 |
0.778 |
|
| 2014 |
Tufariello JM, Malek AA, Vilchèze C, Cole LE, Ratner HK, González PA, Jain P, Hatfull GF, Larsen MH, Jacobs WR. Enhanced specialized transduction using recombineering in Mycobacterium tuberculosis. Mbio. 5: e01179-14. PMID 24865558 DOI: 10.1128/Mbio.01179-14 |
0.361 |
|
| 2014 |
Russell DA, Bowman CA, Hatfull GF. Genome Sequence of Salmonella enterica subsp. enterica Strain Durban. Genome Announcements. 2. PMID 24812224 DOI: 10.1128/Genomea.00399-14 |
0.364 |
|
| 2014 |
Hatfull GF. Mycobacteriophages: windows into tuberculosis. Plos Pathogens. 10: e1003953. PMID 24651299 DOI: 10.1371/Journal.Ppat.1003953 |
0.509 |
|
| 2014 |
Jordan TC, Burnett SH, Carson S, Caruso SM, Clase K, DeJong RJ, Dennehy JJ, Denver DR, Dunbar D, Elgin SC, Findley AM, Gissendanner CR, Golebiewska UP, Guild N, Hartzog GA, ... ... Hatfull GF, et al. A broadly implementable research course in phage discovery and genomics for first-year undergraduate students. Mbio. 5: e01051-13. PMID 24496795 DOI: 10.1128/Mbio.01051-13 |
0.688 |
|
| 2014 |
Dieterle ME, Jacobs-Sera D, Russell D, Hatfull G, Piuri M. Complete Genome Sequences of Lactobacillus Phages J-1 and PL-1. Genome Announcements. 2. PMID 24385573 DOI: 10.1128/Genomea.00998-13 |
0.788 |
|
| 2014 |
Pope WH, Anders KR, Baird M, Bowman CA, Boyle MM, Broussard GW, Chow T, Clase KL, Cooper S, Cornely KA, DeJong RJ, Delesalle VA, Deng L, Dunbar D, Edgington NP, ... ... Hatfull GF, et al. Cluster M mycobacteriophages Bongo, PegLeg, and Rey with unusually large repertoires of tRNA isotypes. Journal of Virology. 88: 2461-80. PMID 24335314 DOI: 10.1128/Jvi.03363-13 |
0.838 |
|
| 2014 |
Singh S, Rockenbach K, Dedrick RM, VanDemark AP, Hatfull GF. Cross-talk between diverse serine integrases. Journal of Molecular Biology. 426: 318-31. PMID 24161951 DOI: 10.1016/J.Jmb.2013.10.013 |
0.437 |
|
| 2014 |
Singh S, Plaks JG, Homa NJ, Amrich CG, Héroux A, Hatfull GF, VanDemark AP. The structure of Xis reveals the basis for filament formation and insight into DNA bending within a mycobacteriophage intasome. Journal of Molecular Biology. 426: 412-22. PMID 24112940 DOI: 10.1016/J.Jmb.2013.10.002 |
0.36 |
|
| 2013 |
Hatfull GF. Complete genome sequences of 63 mycobacteriophages. Genome Announcements. 1. PMID 24285655 DOI: 10.1128/Genomea.00847-13 |
0.472 |
|
| 2013 |
Smith MC, Hendrix RW, Dedrick R, Mitchell K, Ko CC, Russell D, Bell E, Gregory M, Bibb MJ, Pethick F, Jacobs-Sera D, Herron P, Buttner MJ, Hatfull GF. Evolutionary relationships among actinophages and a putative adaptation for growth in Streptomyces spp. Journal of Bacteriology. 195: 4924-35. PMID 23995638 DOI: 10.1128/Jb.00618-13 |
0.483 |
|
| 2013 |
Pope WH, Jacobs-Sera D, Best AA, Broussard GW, Connerly PL, Dedrick RM, Kremer TA, Offner S, Ogiefo AH, Pizzorno MC, Rockenbach K, Russell DA, Stowe EL, Stukey J, Thibault SA, ... ... Hatfull GF, et al. Cluster J mycobacteriophages: intron splicing in capsid and tail genes. Plos One. 8: e69273. PMID 23874930 DOI: 10.1371/Journal.Pone.0069273 |
0.841 |
|
| 2013 |
Piuri M, Rondón L, Urdániz E, Hatfull GF. Generation of affinity-tagged fluoromycobacteriophages by mixed assembly of phage capsids. Applied and Environmental Microbiology. 79: 5608-15. PMID 23851082 DOI: 10.1128/Aem.01016-13 |
0.74 |
|
| 2013 |
Broussard GW, Hatfull GF. Evolution of genetic switch complexity. Bacteriophage. 3: e24186. PMID 23819104 DOI: 10.4161/bact.24186 |
0.792 |
|
| 2013 |
Singh S, Ghosh P, Hatfull GF. Attachment site selection and identity in Bxb1 serine integrase-mediated site-specific recombination. Plos Genetics. 9: e1003490. PMID 23658531 DOI: 10.1371/Journal.Pgen.1003490 |
0.757 |
|
| 2013 |
Sambandan D, Dao DN, Weinrick BC, Vilchèze C, Gurcha SS, Ojha A, Kremer L, Besra GS, Hatfull GF, Jacobs WR. Keto-mycolic acid-dependent pellicle formation confers tolerance to drug-sensitive Mycobacterium tuberculosis. Mbio. 4: e00222-13. PMID 23653446 DOI: 10.1128/Mbio.00222-13 |
0.698 |
|
| 2013 |
da Silva JL, Piuri M, Broussard G, Marinelli LJ, Bastos GM, Hirata RD, Hatfull GF, Hirata MH. Application of BRED technology to construct recombinant D29 reporter phage expressing EGFP. Fems Microbiology Letters. 344: 166-72. PMID 23651353 DOI: 10.1111/1574-6968.12171 |
0.814 |
|
| 2013 |
Dedrick RM, Marinelli LJ, Newton GL, Pogliano K, Pogliano J, Hatfull GF. Functional requirements for bacteriophage growth: gene essentiality and expression in mycobacteriophage Giles. Molecular Microbiology. 88: 577-89. PMID 23560716 DOI: 10.1111/Mmi.12210 |
0.815 |
|
| 2013 |
SenÄilo A, Jacobs-Sera D, Russell DA, Ko CC, Bowman CA, Atanasova NS, Österlund E, Oksanen HM, Bamford DH, Hatfull GF, Roine E, Hendrix RW. Snapshot of haloarchaeal tailed virus genomes. Rna Biology. 10: 803-16. PMID 23470522 DOI: 10.4161/Rna.24045 |
0.491 |
|
| 2013 |
Broussard GW, Oldfield LM, Villanueva VM, Lunt BL, Shine EE, Hatfull GF. Integration-dependent bacteriophage immunity provides insights into the evolution of genetic switches. Molecular Cell. 49: 237-48. PMID 23246436 DOI: 10.1016/J.Molcel.2012.11.012 |
0.796 |
|
| 2012 |
Jacobs-Sera D, Marinelli LJ, Bowman C, Broussard GW, Guerrero Bustamante C, Boyle MM, Petrova ZO, Dedrick RM, Pope WH, Modlin RL, Hendrix RW, Hatfull GF. On the nature of mycobacteriophage diversity and host preference. Virology. 434: 187-201. PMID 23084079 DOI: 10.1016/J.Virol.2012.09.026 |
0.824 |
|
| 2012 |
Marinelli LJ, Fitz-Gibbon S, Hayes C, Bowman C, Inkeles M, Loncaric A, Russell DA, Jacobs-Sera D, Cokus S, Pellegrini M, Kim J, Miller JF, Hatfull GF, Modlin RL. Propionibacterium acnes bacteriophages display limited genetic diversity and broad killing activity against bacterial skin isolates. Mbio. 3. PMID 23015740 DOI: 10.1128/Mbio.00279-12 |
0.829 |
|
| 2012 |
Bai H, Kath JE, Zörgiebel FM, Sun M, Ghosh P, Hatfull GF, Grindley ND, Marko JF. Remote control of DNA-acting enzymes by varying the Brownian dynamics of a distant DNA end. Proceedings of the National Academy of Sciences of the United States of America. 109: 16546-51. PMID 23011800 DOI: 10.1073/Pnas.1203118109 |
0.77 |
|
| 2012 |
Marinelli LJ, Hatfull GF, Piuri M. Recombineering: A powerful tool for modification of bacteriophage genomes. Bacteriophage. 2: 5-14. PMID 22666652 DOI: 10.4161/bact.18778 |
0.843 |
|
| 2012 |
Payne KM, Hatfull GF. Mycobacteriophage endolysins: diverse and modular enzymes with multiple catalytic activities. Plos One. 7: e34052. PMID 22470512 DOI: 10.1371/Journal.Pone.0034052 |
0.71 |
|
| 2012 |
Hatfull GF. The secret lives of mycobacteriophages. Advances in Virus Research. 82: 179-288. PMID 22420855 DOI: 10.1016/B978-0-12-394621-8.00015-7 |
0.497 |
|
| 2012 |
Kulka K, Hatfull G, Ojha AK. Growth of Mycobacterium tuberculosis biofilms. Journal of Visualized Experiments : Jove. PMID 22371116 DOI: 10.3791/3820 |
0.7 |
|
| 2012 |
Mageeney C, Pope WH, Harrison M, Moran D, Cross T, Jacobs-Sera D, Hendrix RW, Dunbar D, Hatfull GF. Mycobacteriophage Marvin: a new singleton phage with an unusual genome organization. Journal of Virology. 86: 4762-75. PMID 22357284 DOI: 10.1128/Jvi.00075-12 |
0.518 |
|
| 2012 |
Hatfull GF. Complete genome sequences of 138 mycobacteriophages. Journal of Virology. 86: 2382-4. PMID 22282335 DOI: 10.1128/Jvi.06870-11 |
0.481 |
|
| 2012 |
Savinov A, Pan J, Ghosh P, Hatfull GF. The Bxb1 gp47 recombination directionality factor is required not only for prophage excision, but also for phage DNA replication. Gene. 495: 42-8. PMID 22227494 DOI: 10.1016/J.Gene.2011.12.003 |
0.756 |
|
| 2011 |
Pope WH, Ferreira CM, Jacobs-Sera D, Benjamin RC, Davis AJ, DeJong RJ, Elgin SC, Guilfoile FR, Forsyth MH, Harris AD, Harvey SE, Hughes LE, Hynes PM, Jackson AS, Jalal MD, ... ... Hatfull GF, et al. Cluster K mycobacteriophages: insights into the evolutionary origins of mycobacteriophage TM4. Plos One. 6: e26750. PMID 22053209 DOI: 10.1371/Journal.Pone.0026750 |
0.817 |
|
| 2011 |
Hatfull GF, Hendrix RW. Bacteriophages and their genomes. Current Opinion in Virology. 1: 298-303. PMID 22034588 DOI: 10.1016/J.Coviro.2011.06.009 |
0.452 |
|
| 2011 |
Jain P, Thaler DS, Maiga M, Timmins GS, Bishai WR, Hatfull GF, Larsen MH, Jacobs WR. Reporter phage and breath tests: emerging phenotypic assays for diagnosing active tuberculosis, antibiotic resistance, and treatment efficacy. The Journal of Infectious Diseases. 204: S1142-50. PMID 21996696 DOI: 10.1093/Infdis/Jir454 |
0.325 |
|
| 2011 |
Cresawn SG, Bogel M, Day N, Jacobs-Sera D, Hendrix RW, Hatfull GF. Phamerator: a bioinformatic tool for comparative bacteriophage genomics. Bmc Bioinformatics. 12: 395. PMID 21991981 DOI: 10.1186/1471-2105-12-395 |
0.742 |
|
| 2011 |
Marine R, Polson SW, Ravel J, Hatfull G, Russell D, Sullivan M, Syed F, Dumas M, Wommack KE. Evaluation of a transposase protocol for rapid generation of shotgun high-throughput sequencing libraries from nanogram quantities of DNA. Applied and Environmental Microbiology. 77: 8071-9. PMID 21948828 DOI: 10.1128/Aem.05610-11 |
0.466 |
|
| 2011 |
Huang J, Ghosh P, Hatfull GF, Hong Y. Successive and targeted DNA integrations in the Drosophila genome by Bxb1 and phiC31 integrases. Genetics. 189: 391-5. PMID 21652525 DOI: 10.1534/Genetics.111.129247 |
0.77 |
|
| 2011 |
Bai H, Sun M, Ghosh P, Hatfull GF, Grindley ND, Marko JF. Single-molecule analysis reveals the molecular bearing mechanism of DNA strand exchange by a serine recombinase. Proceedings of the National Academy of Sciences of the United States of America. 108: 7419-24. PMID 21502527 DOI: 10.1073/Pnas.1018436108 |
0.787 |
|
| 2011 |
Rondón L, Piuri M, Jacobs WR, de Waard J, Hatfull GF, Takiff HE. Evaluation of fluoromycobacteriophages for detecting drug resistance in Mycobacterium tuberculosis. Journal of Clinical Microbiology. 49: 1838-42. PMID 21346042 DOI: 10.1128/Jcm.02476-10 |
0.71 |
|
| 2011 |
Pope WH, Jacobs-Sera D, Russell DA, Peebles CL, Al-Atrache Z, Alcoser TA, Alexander LM, Alfano MB, Alford ST, Amy NE, Anderson MD, Anderson AG, Ang AA, Ares M, Barber AJ, ... ... Hatfull GF, et al. Expanding the diversity of mycobacteriophages: insights into genome architecture and evolution. Plos One. 6: e16329. PMID 21298013 DOI: 10.1371/Journal.Pone.0016329 |
0.772 |
|
| 2010 |
Hatfull GF. Mycobacteriophages: genes and genomes. Annual Review of Microbiology. 64: 331-56. PMID 20528690 DOI: 10.1146/Annurev.Micro.112408.134233 |
0.487 |
|
| 2010 |
Alibaud L, Alahari A, Trivelli X, Ojha AK, Hatfull GF, Guerardel Y, Kremer L. Temperature-dependent regulation of mycolic acid cyclopropanation in saprophytic mycobacteria: role of the Mycobacterium smegmatis 1351 gene (MSMEG_1351) in CIS-cyclopropanation of alpha-mycolates. The Journal of Biological Chemistry. 285: 21698-707. PMID 20457615 DOI: 10.1074/Jbc.M110.125724 |
0.711 |
|
| 2010 |
Ojha AK, Trivelli X, Guerardel Y, Kremer L, Hatfull GF. Enzymatic hydrolysis of trehalose dimycolate releases free mycolic acids during mycobacterial growth in biofilms. The Journal of Biological Chemistry. 285: 17380-9. PMID 20375425 DOI: 10.1074/Jbc.M110.112813 |
0.698 |
|
| 2010 |
Traag BA, Driks A, Stragier P, Bitter W, Broussard G, Hatfull G, Chu F, Adams KN, Ramakrishnan L, Losick R. Do mycobacteria produce endospores? Proceedings of the National Academy of Sciences of the United States of America. 107: 878-81. PMID 20080769 DOI: 10.1073/Pnas.0911299107 |
0.792 |
|
| 2010 |
Hatfull GF, Jacobs-Sera D, Lawrence JG, Pope WH, Russell DA, Ko CC, Weber RJ, Patel MC, Germane KL, Edgar RH, Hoyte NN, Bowman CA, Tantoco AT, Paladin EC, Myers MS, et al. Comparative genomic analysis of 60 Mycobacteriophage genomes: genome clustering, gene acquisition, and gene size. Journal of Molecular Biology. 397: 119-43. PMID 20064525 DOI: 10.1016/J.Jmb.2010.01.011 |
0.77 |
|
| 2009 |
Sampson T, Broussard GW, Marinelli LJ, Jacobs-Sera D, Ray M, Ko CC, Russell D, Hendrix RW, Hatfull GF. Mycobacteriophages BPs, Angel and Halo: comparative genomics reveals a novel class of ultra-small mobile genetic elements. Microbiology (Reading, England). 155: 2962-77. PMID 19556295 DOI: 10.1099/Mic.0.030486-0 |
0.82 |
|
| 2009 |
Payne K, Sun Q, Sacchettini J, Hatfull GF. Mycobacteriophage Lysin B is a novel mycolylarabinogalactan esterase. Molecular Microbiology. 73: 367-81. PMID 19555454 DOI: 10.1111/J.1365-2958.2009.06775.X |
0.699 |
|
| 2009 |
Piuri M, Jacobs WR, Hatfull GF. Fluoromycobacteriophages for rapid, specific, and sensitive antibiotic susceptibility testing of Mycobacterium tuberculosis. Plos One. 4: e4870. PMID 19300517 DOI: 10.1371/Journal.Pone.0004870 |
0.707 |
|
| 2009 |
Stewart CR, Casjens SR, Cresawn SG, Houtz JM, Smith AL, Ford ME, Peebles CL, Hatfull GF, Hendrix RW, Huang WM, Pedulla ML. The genome of Bacillus subtilis bacteriophage SPO1. Journal of Molecular Biology. 388: 48-70. PMID 19285085 DOI: 10.1016/J.Jmb.2009.03.009 |
0.839 |
|
| 2008 |
Marinelli LJ, Piuri M, Swigonová Z, Balachandran A, Oldfield LM, van Kessel JC, Hatfull GF. BRED: a simple and powerful tool for constructing mutant and recombinant bacteriophage genomes. Plos One. 3: e3957. PMID 19088849 DOI: 10.1371/Journal.Pone.0003957 |
0.833 |
|
| 2008 |
van Kessel JC, Marinelli LJ, Hatfull GF. Recombineering mycobacteria and their phages. Nature Reviews. Microbiology. 6: 851-7. PMID 18923412 DOI: 10.1038/Nrmicro2014 |
0.816 |
|
| 2008 |
Hatfull GF. Bacteriophage genomics. Current Opinion in Microbiology. 11: 447-53. PMID 18824125 DOI: 10.1016/j.mib.2008.09.004 |
0.394 |
|
| 2008 |
Hatfull GF, Cresawn SG, Hendrix RW. Comparative genomics of the mycobacteriophages: insights into bacteriophage evolution. Research in Microbiology. 159: 332-9. PMID 18653319 DOI: 10.1016/J.Resmic.2008.04.008 |
0.772 |
|
| 2008 |
Comeau AM, Hatfull GF, Krisch HM, Lindell D, Mann NH, Prangishvili D. Exploring the prokaryotic virosphere. Research in Microbiology. 159: 306-13. PMID 18639443 DOI: 10.1016/J.Resmic.2008.05.001 |
0.354 |
|
| 2008 |
Ojha AK, Baughn AD, Sambandan D, Hsu T, Trivelli X, Guerardel Y, Alahari A, Kremer L, Jacobs WR, Hatfull GF. Growth of Mycobacterium tuberculosis biofilms containing free mycolic acids and harbouring drug-tolerant bacteria. Molecular Microbiology. 69: 164-74. PMID 18466296 DOI: 10.1111/J.1365-2958.2008.06274.X |
0.702 |
|
| 2008 |
van Kessel JC, Hatfull GF. Mycobacterial recombineering. Methods in Molecular Biology (Clifton, N.J.). 435: 203-15. PMID 18370078 DOI: 10.1007/978-1-59745-232-8_15 |
0.333 |
|
| 2008 |
Ghosh P, Bibb LA, Hatfull GF. Two-step site selection for serine-integrase-mediated excision: DNA-directed integrase conformation and central dinucleotide proofreading. Proceedings of the National Academy of Sciences of the United States of America. 105: 3238-43. PMID 18299577 DOI: 10.1073/Pnas.0711649105 |
0.805 |
|
| 2008 |
van Kessel JC, Hatfull GF. Efficient point mutagenesis in mycobacteria using single-stranded DNA recombineering: characterization of antimycobacterial drug targets. Molecular Microbiology. 67: 1094-107. PMID 18221264 DOI: 10.1111/J.1365-2958.2008.06109.X |
0.441 |
|
| 2008 |
Morris P, Marinelli LJ, Jacobs-Sera D, Hendrix RW, Hatfull GF. Genomic characterization of mycobacteriophage Giles: evidence for phage acquisition of host DNA by illegitimate recombination. Journal of Bacteriology. 190: 2172-82. PMID 18178732 DOI: 10.1128/Jb.01657-07 |
0.851 |
|
| 2007 |
Ojha A, Hatfull GF. The role of iron in Mycobacterium smegmatis biofilm formation: the exochelin siderophore is essential in limiting iron conditions for biofilm formation but not for planktonic growth. Molecular Microbiology. 66: 468-83. PMID 17854402 DOI: 10.1111/J.1365-2958.2007.05935.X |
0.664 |
|
| 2007 |
Pham TT, Jacobs-Sera D, Pedulla ML, Hendrix RW, Hatfull GF. Comparative genomic analysis of mycobacteriophage Tweety: evolutionary insights and construction of compatible site-specific integration vectors for mycobacteria. Microbiology (Reading, England). 153: 2711-23. PMID 17660435 DOI: 10.1099/Mic.0.2007/008904-0 |
0.846 |
|
| 2007 |
Weigele PR, Pope WH, Pedulla ML, Houtz JM, Smith AL, Conway JF, King J, Hatfull GF, Lawrence JG, Hendrix RW. Genomic and structural analysis of Syn9, a cyanophage infecting marine Prochlorococcus and Synechococcus. Environmental Microbiology. 9: 1675-95. PMID 17564603 DOI: 10.1111/J.1462-2920.2007.01285.X |
0.841 |
|
| 2007 |
Pope WH, Weigele PR, Chang J, Pedulla ML, Ford ME, Houtz JM, Jiang W, Chiu W, Hatfull GF, Hendrix RW, King J. Genome sequence, structural proteins, and capsid organization of the cyanophage Syn5: a "horned" bacteriophage of marine synechococcus. Journal of Molecular Biology. 368: 966-81. PMID 17383677 DOI: 10.1016/J.Jmb.2007.02.046 |
0.826 |
|
| 2007 |
van Kessel JC, Hatfull GF. Recombineering in Mycobacterium tuberculosis. Nature Methods. 4: 147-52. PMID 17179933 DOI: 10.1038/Nmeth996 |
0.435 |
|
| 2006 |
Hanauer DI, Jacobs-Sera D, Pedulla ML, Cresawn SG, Hendrix RW, Hatfull GF. Inquiry learning. Teaching scientific inquiry. Science (New York, N.Y.). 314: 1880-1. PMID 17185586 DOI: 10.1126/Science.1136796 |
0.745 |
|
| 2006 |
Piuri M, Hatfull GF. A peptidoglycan hydrolase motif within the mycobacteriophage TM4 tape measure protein promotes efficient infection of stationary phase cells. Molecular Microbiology. 62: 1569-85. PMID 17083467 DOI: 10.1111/J.1365-2958.2006.05473.X |
0.772 |
|
| 2006 |
Pitcher RS, Tonkin LM, Daley JM, Palmbos PL, Green AJ, Velting TL, Brzostek A, Korycka-Machala M, Cresawn S, Dziadek J, Hatfull GF, Wilson TE, Doherty AJ. Mycobacteriophage exploit NHEJ to facilitate genome circularization. Molecular Cell. 23: 743-8. PMID 16949369 DOI: 10.1016/J.Molcel.2006.07.009 |
0.455 |
|
| 2006 |
Nkrumah LJ, Muhle RA, Moura PA, Ghosh P, Hatfull GF, Jacobs WR, Fidock DA. Efficient site-specific integration in Plasmodium falciparum chromosomes mediated by mycobacteriophage Bxb1 integrase. Nature Methods. 3: 615-21. PMID 16862136 DOI: 10.1038/Nmeth904 |
0.757 |
|
| 2006 |
Hatfull GF, Pedulla ML, Jacobs-Sera D, Cichon PM, Foley A, Ford ME, Gonda RM, Houtz JM, Hryckowian AJ, Kelchner VA, Namburi S, Pajcini KV, Popovich MG, Schleicher DT, Simanek BZ, et al. Exploring the mycobacteriophage metaproteome: phage genomics as an educational platform. Plos Genetics. 2: e92. PMID 16789831 DOI: 10.1371/Journal.Pgen.0020092 |
0.833 |
|
| 2006 |
Ghosh P, Wasil LR, Hatfull GF. Control of phage Bxb1 excision by a novel recombination directionality factor. Plos Biology. 4: e186. PMID 16719562 DOI: 10.1371/Journal.Pbio.0040186 |
0.77 |
|
| 2005 |
Ojha A, Anand M, Bhatt A, Kremer L, Jacobs WR, Hatfull GF. GroEL1: a dedicated chaperone involved in mycolic acid biosynthesis during biofilm formation in mycobacteria. Cell. 123: 861-73. PMID 16325580 DOI: 10.1016/J.Cell.2005.09.012 |
0.703 |
|
| 2005 |
Ghosh P, Pannunzio NR, Hatfull GF, Gottesman M. Synapsis in phage Bxb1 integration: Selection mechanism for the correct pair of recombination sites Journal of Molecular Biology. 349: 331-348. PMID 15890199 DOI: 10.1016/J.Jmb.2005.03.043 |
0.748 |
|
| 2005 |
Bibb LA, Hancox MI, Hatfull GF. Integration and excision by the large serine recombinase phiRv1 integrase. Molecular Microbiology. 55: 1896-910. PMID 15752208 DOI: 10.1111/J.1365-2958.2005.04517.X |
0.82 |
|
| 2005 |
Adhya S, Black L, Friedman D, Hatfull G, Kreuzer K, Merril C, Oppenheim A, Rohwer F, Young R. 2004 ASM Conference on the New Phage Biology: the 'Phage Summit'. Molecular Microbiology. 55: 1300-14. PMID 15720541 DOI: 10.1111/J.1365-2958.2005.04509.X |
0.328 |
|
| 2005 |
Casjens SR, Gilcrease EB, Winn-Stapley DA, Schicklmaier P, Schmieger H, Pedulla ML, Ford ME, Houtz JM, Hatfull GF, Hendrix RW. The generalized transducing Salmonella bacteriophage ES18: complete genome sequence and DNA packaging strategy. Journal of Bacteriology. 187: 1091-104. PMID 15659686 DOI: 10.1128/Jb.187.3.1091-1104.2005 |
0.848 |
|
| 2004 |
Lee S, Kriakov J, Vilcheze C, Dai Z, Hatfull GF, Jacobs WR. Bxz1, a new generalized transducing phage for mycobacteria. Fems Microbiology Letters. 241: 271-6. PMID 15598543 DOI: 10.1016/J.Femsle.2004.10.032 |
0.346 |
|
| 2004 |
Dobbins AT, George M, Basham DA, Ford ME, Houtz JM, Pedulla ML, Lawrence JG, Hatfull GF, Hendrix RW. Complete genomic sequence of the virulent Salmonella bacteriophage SP6. Journal of Bacteriology. 186: 1933-44. PMID 15028677 DOI: 10.1128/Jb.186.7.1933-1944.2004 |
0.83 |
|
| 2004 |
Casjens SR, Gilcrease EB, Huang WM, Bunny KL, Pedulla ML, Ford ME, Houtz JM, Hatfull GF, Hendrix RW. The pKO2 linear plasmid prophage of Klebsiella oxytoca. Journal of Bacteriology. 186: 1818-32. PMID 14996813 DOI: 10.1128/Jb.186.6.1818-1832.2004 |
0.833 |
|
| 2003 |
Ghosh P, Kim AI, Hatfull GF. The orientation of mycobacteriophage Bxb1 integration is solely dependent on the central dinucleotide of attP and attB. Molecular Cell. 12: 1101-11. PMID 14636570 DOI: 10.1016/S1097-2765(03)00444-1 |
0.757 |
|
| 2003 |
Kim AI, Ghosh P, Aaron MA, Bibb LA, Jain S, Hatfull GF. Mycobacteriophage Bxb1 integrates into the Mycobacterium smegmatis groEL1 gene. Molecular Microbiology. 50: 463-73. PMID 14617171 DOI: 10.1046/J.1365-2958.2003.03723.X |
0.832 |
|
| 2003 |
Hendrix RW, Hatfull GF, Smith MC. Bacteriophages with tails: chasing their origins and evolution. Research in Microbiology. 154: 253-7. PMID 12798229 DOI: 10.1016/S0923-2508(03)00068-8 |
0.446 |
|
| 2003 |
Pedulla ML, Ford ME, Houtz JM, Karthikeyan T, Wadsworth C, Lewis JA, Jacobs-Sera D, Falbo J, Gross J, Pannunzio NR, Brucker W, Kumar V, Kandasamy J, Keenan L, Bardarov S, ... ... Hatfull GF, et al. Origins of highly mosaic mycobacteriophage genomes. Cell. 113: 171-82. PMID 12705866 DOI: 10.1016/S0092-8674(03)00233-2 |
0.82 |
|
| 2003 |
Lewis JA, Hatfull GF. Control of directionality in L5 integrase-mediated site-specific recombination. Journal of Molecular Biology. 326: 805-21. PMID 12581642 DOI: 10.1016/S0022-2836(02)01475-4 |
0.511 |
|
| 2003 |
Pedulla ML, Ford ME, Karthikeyan T, Houtz JM, Hendrix RW, Hatfull GF, Poteete AR, Gilcrease EB, Winn-Stapley DA, Casjens SR. Corrected sequence of the bacteriophage p22 genome. Journal of Bacteriology. 185: 1475-7. PMID 12562822 DOI: 10.1128/Jb.185.4.1475-1477.2003 |
0.815 |
|
| 2002 |
Bardarov S, Bardarov Jr S, Pavelka Jr MS, Sambandamurthy V, Larsen M, Tufariello J, Chan J, Hatfull G, Jacobs Jr WR. Specialized transduction: an efficient method for generating marked and unmarked targeted gene disruptions in Mycobacterium tuberculosis, M. bovis BCG and M. smegmatis. Microbiology (Reading, England). 148: 3007-17. PMID 12368434 DOI: 10.1099/00221287-148-10-3007 |
0.399 |
|
| 2002 |
Bibb LA, Hatfull GF. Integration and excision of the Mycobacterium tuberculosis prophage-like element, φRv1 Molecular Microbiology. 45: 1515-1526. PMID 12354222 DOI: 10.1046/J.1365-2958.2002.03130.X |
0.824 |
|
| 2002 |
Lawrence JG, Hatfull GF, Hendrix RW. Imbroglios of viral taxonomy: genetic exchange and failings of phenetic approaches. Journal of Bacteriology. 184: 4891-905. PMID 12169615 DOI: 10.1128/Jb.184.17.4891-4905.2002 |
0.368 |
|
| 2002 |
Morgan GJ, Hatfull GF, Casjens S, Hendrix RW. Bacteriophage Mu genome sequence: analysis and comparison with Mu-like prophages in Haemophilus, Neisseria and Deinococcus. Journal of Molecular Biology. 317: 337-59. PMID 11922669 DOI: 10.1006/Jmbi.2002.5437 |
0.509 |
|
| 2001 |
Lewis JA, Hatfull GF. Control of directionality in integrase-mediated recombination: Examination of recombination directionality factors (RDFs) including Xis and Cox proteins Nucleic Acids Research. 29: 2205-2216. PMID 11376138 DOI: 10.1093/Nar/29.11.2205 |
0.382 |
|
| 2000 |
Jain S, Hatfull GF. Transcriptional regulation and immunity in mycobacteriophage Bxb1 Molecular Microbiology. 38: 971-985. PMID 11123672 DOI: 10.1046/J.1365-2958.2000.02184.X |
0.681 |
|
| 2000 |
Mediavilla J, Jain S, Kriakov J, Ford ME, Duda RL, Jacobs WR, Hendrix RW, Hatfull GF. Genome organization and characterization of mycobacteriophage Bxb1 Molecular Microbiology. 38: 955-970. PMID 11123671 DOI: 10.1046/J.1365-2958.2000.02183.X |
0.698 |
|
| 2000 |
Hendrix RW, Lawrence JG, Hatfull GF, Casjens S. The origins and ongoing evolution of viruses Trends in Microbiology. 8: 504-508. PMID 11121760 DOI: 10.1016/S0966-842X(00)01863-1 |
0.439 |
|
| 2000 |
Belanger AE, Porter JC, Hatfull GF. Genetic analysis of peptidoglycan biosynthesis in mycobacteria: Characterization of a ddlA mutant of Mycobacterium smegmatis Journal of Bacteriology. 182: 6854-6856. PMID 11073937 DOI: 10.1128/Jb.182.23.6854-6856.2000 |
0.311 |
|
| 2000 |
Peña CEA, Kahlenberg JM, Hatfull GF. Assembly and activation of site-specific recombination complexes Proceedings of the National Academy of Sciences of the United States of America. 97: 7760-7765. PMID 10869430 DOI: 10.1073/Pnas.140014297 |
0.444 |
|
| 2000 |
Ravin V, Ravin N, Casjens S, Ford ME, Hatfull GF, Hendrix RW. Genomic sequence and analysis of the atypical temperate bacteriophage N15 Journal of Molecular Biology. 299: 53-73. PMID 10860722 DOI: 10.1006/Jmbi.2000.3731 |
0.508 |
|
| 2000 |
Juhala RJ, Ford ME, Duda RL, Youlton A, Hatfull GF, Hendrix RW. Genomic sequences of bacteriophages HK97 and HK022: Pervasive genetic mosaicism in the lambdoid bacteriophages Journal of Molecular Biology. 299: 27-51. PMID 10860721 DOI: 10.1006/Jmbi.2000.3729 |
0.531 |
|
| 2000 |
Peteroy M, Severin A, Zhao F, Rosner D, Lopatin U, Scherman H, Belanger A, Harvey B, Hatfull GF, Brennan PJ, Connell ND. Characterization of a Mycobacterium smegmatis mutant that is simultaneously resistant to D-cycloserine and vancomycin Antimicrobial Agents and Chemotherapy. 44: 1701-1704. PMID 10817733 DOI: 10.1128/Aac.44.6.1701-1704.2000 |
0.773 |
|
| 2000 |
Lewis JA, Hatfull GF. Identification and characterization of mycobacteriophage L5 excisionase Molecular Microbiology. 35: 350-360. PMID 10652095 DOI: 10.1046/J.1365-2958.2000.01695.X |
0.428 |
|
| 1999 |
Riska PF, Su Y, Bardarov S, Freundlich L, Sarkis G, Hatfull G, Carrière C, Kumar V, Chan J, Jacobs WR. Rapid film-based determination of antibiotic susceptibilities of Mycobacterium tuberculosis strains by using a luciferase reporter phage and the Bronx Box Journal of Clinical Microbiology. 37: 1144-1149. PMID 10074539 DOI: 10.1128/Jcm.37.4.1144-1149.1999 |
0.778 |
|
| 1999 |
Hendrix RW, Smith MCM, Burns RN, Ford ME, Hatfull GF. Evolutionary relationships among diverse bacteriophages and prophages: All the world's a phage Proceedings of the National Academy of Sciences of the United States of America. 96: 2192-2197. PMID 10051617 DOI: 10.1073/Pnas.96.5.2192 |
0.543 |
|
| 1999 |
Peña CEA, Kahlenberg JM, Hatfull GF. Protein-DNA complexes in mycobacteriophage L5 integrative recombination Journal of Bacteriology. 181: 454-461. PMID 9882658 DOI: 10.1128/Jb.181.2.454-461.1999 |
0.421 |
|
| 1999 |
Hatfull GF. 9 Genetic Methods in Mycobacteria Methods in Microbiology. 29: 251-276. DOI: 10.1016/S0580-9517(08)70120-X |
0.316 |
|
| 1998 |
Ford ME, Stenstrom C, Hendrix RW, Hatfull GF. Mycobacteriophage TM4: Genome structure and gene expression Tubercle and Lung Disease. 79: 63-73. PMID 10645443 DOI: 10.1054/Tuld.1998.0007 |
0.497 |
|
| 1998 |
Peña CEA, Stoner J, Hatfull GF. Mycobacteriophage D29 integrase-mediated recombination: Specificity of mycobacteriophage integration Gene. 225: 143-151. PMID 9931474 DOI: 10.1016/S0378-1119(98)00490-9 |
0.389 |
|
| 1998 |
Pedulla ML, Hatfull GF. Characterization of the mIHF gene of Mycobacterium smegmatis Journal of Bacteriology. 180: 5473-5477. PMID 9765584 DOI: 10.1128/Jb.180.20.5473-5477.1998 |
0.805 |
|
| 1998 |
Peña CEA, Kahlenberg JM, Hatfull GF. The role of supercoiling in mycobacteriophage L5 integrative recombination Nucleic Acids Research. 26: 4012-4018. PMID 9705513 DOI: 10.1093/Nar/26.17.4012 |
0.438 |
|
| 1998 |
Ford ME, Sarkis GJ, Belanger AE, Hendrix RW, Hatfull GF. Genome structure of mycobacteriophage D29: Implications for phage evolution Journal of Molecular Biology. 279: 143-164. PMID 9636706 DOI: 10.1006/Jmbi.1997.1610 |
0.454 |
|
| 1998 |
Klann AG, Belanger AE, Abanes-De Mello A, Lee JY, Hatfull GF. Characterization of the dnaG locus in Mycobacterium smegmatis reveals linkage of DNA replication and cell division. Journal of Bacteriology. 180: 65-72. PMID 9422594 DOI: 10.1128/Jb.180.1.65-72.1998 |
0.827 |
|
| 1997 |
Fullner KJ, Hatfull GF. Mycobacteriophage 15 infection of Mycobacterium bovis BCG: Implications for phage genetics in the slow-growing mycobacteria Molecular Microbiology. 26: 755-766. PMID 9427405 DOI: 10.1046/J.1365-2958.1997.6111984.X |
0.33 |
|
| 1997 |
Bardarov S, Kriakov J, Carriere C, Yu S, Vaamonde C, Mcadam RA, Bloom BR, Hatfull GF, Jacobs WR. Conditionally replicating mycobacteriophages: A system for transposon delivery to Mycobacterium tuberculosis Proceedings of the National Academy of Sciences of the United States of America. 94: 10961-10966. PMID 9380742 DOI: 10.1073/Pnas.94.20.10961 |
0.433 |
|
| 1997 |
Brown KL, Sarkis GJ, Wadsworth C, Hatfull GF. Transcriptional silencing by the mycobacteriophage L5 repressor. The Embo Journal. 16: 5914-21. PMID 9312049 DOI: 10.1093/Emboj/16.19.5914 |
0.808 |
|
| 1997 |
Peña CEA, Lee MH, Pedulla ML, Hatfull GF. Characterization of the Mycobacteriophage L5 attachment site, attP Journal of Molecular Biology. 266: 76-92. PMID 9054972 DOI: 10.1006/jmbi.1996.0774 |
0.811 |
|
| 1996 |
Pedulla ML, Lee MH, Lever DC, Hatfull GF. A novel host factor for integration of mycobacteriophage L5. Proceedings of the National Academy of Sciences of the United States of America. 93: 15411-6. PMID 8986825 DOI: 10.1073/pnas.93.26.15411 |
0.815 |
|
| 1996 |
Peña CEA, Stoner JE, Hatfull GF. Positions of strand exchange in mycobacteriophage L5 integration and characterization of the attB site Journal of Bacteriology. 178: 5533-5536. PMID 8808947 |
0.337 |
|
| 1995 |
Nesbit CE, Levin ME, Donnelly-Wu MK, Hatfull GF. Transcriptional regulation of repressor synthesis in mycobacteriophage L5 Molecular Microbiology. 17: 1045-1056. PMID 8594325 |
0.804 |
|
| 1995 |
Sarkis GJ, Jacobs WR, Hatfull GF. L5 luciferase reporter mycobacteriophages: A sensitive tool for the detection and assay of live mycobacteria Molecular Microbiology. 15: 1055-1067. PMID 7623662 DOI: 10.1111/J.1365-2958.1995.Tb02281.X |
0.324 |
|
| 1994 |
Pascopella L, Collins FM, Martin JM, Mong Hong Lee, Hatfull GF, Stover CK, Bloom BR, Jacobs WR. Use of in vivo complementation in Mycobacterium tuberculosis to identify a genomic fragment associated with virulence Infection and Immunity. 62: 1313-1319. PMID 8132338 DOI: 10.1128/Iai.62.4.1313-1319.1994 |
0.3 |
|
| 1994 |
Hatfull GF, Barsom L, Chang L, Donnelly-Wu M, Lee MH, Levin M, Nesbit C, Sarkis GJ. Bacteriophages as tools for vaccine development Developments in Biological Standardization. 82: 43-47. PMID 7958482 |
0.764 |
|
| 1993 |
Jacobs WR, Barletta RG, Udani R, Chan J, Kalkut G, Sosne G, Kieser T, Sarkis GJ, Hatfull GF, Bloom BR. Rapid assessment of drug susceptibilities of mycobacterium tuberculosis by means of luciferase reporter phages Science. 260: 819-822. PMID 8484123 DOI: 10.1126/Science.8484123 |
0.32 |
|
| 1993 |
Donnelly-Wu MK, Jacobs WR, Hatfull GF. Superinfection immunity of mycobacteriophage L5: Applications for genetic transformation of mycobacteria Molecular Microbiology. 7: 407-417. PMID 8459767 DOI: 10.1111/J.1365-2958.1993.Tb01132.X |
0.803 |
|
| 1993 |
Hatfull GF, Sarkis GJ. DNA sequence, structure and gene expression of mycobacteriophage L5: A phage system for mycobacterial genetics Molecular Microbiology. 7: 395-405. PMID 8459766 DOI: 10.1111/J.1365-2958.1993.Tb01131.X |
0.447 |
|
| 1993 |
Levin ME, Hatfull GF. Mycobacterium smegmatis RNA polymerase: DNA supercoiling, action of rifampicin and mechanism of rifampicin resistance Molecular Microbiology. 8: 277-285. PMID 8316080 DOI: 10.1111/J.1365-2958.1993.Tb01572.X |
0.302 |
|
| 1993 |
Mong Hong Lee, Hatfull GF. Mycobacteriophage L5 integrase-mediated site-specific integration in vitro Journal of Bacteriology. 175: 6836-6841. PMID 8226625 DOI: 10.1128/Jb.175.21.6836-6841.1993 |
0.417 |
|
| 1993 |
Hatfull GF. Genetic transformation of mycobacteria Trends in Microbiology. 1: 310-314. PMID 8162416 DOI: 10.1016/0966-842X(93)90008-F |
0.338 |
|
| 1991 |
Stover CK, De La Cruz VF, Fuerst TR, Burlein JE, Benson LA, Bennett LT, Bansal GP, Young JF, Lee MH, Hatfull GF, Snapper SB, Barletta RG, Jacobs WR, Bloom BR. New use of BCG for recombinant vaccines Nature. 351: 456-460. PMID 1904554 DOI: 10.1038/351456A0 |
0.608 |
|
| 1991 |
Lee Hong M, Pascopella L, Jacobs WR, Hatfull GF. Site-specific integration of mycobacteriophage L5: Integration-proficient vectors for Mycobacterium smegmatis, Mycobacterium tuberculosis, and bacille Calmette-Guérin Proceedings of the National Academy of Sciences of the United States of America. 88: 3111-3115. PMID 1901654 DOI: 10.1073/Pnas.88.8.3111 |
0.439 |
|
| 1991 |
Stark WM, Grindley ND, Hatfull GF, Boocock MR. Resolvase-catalysed reactions between res sites differing in the central dinucleotide of subsite I. The Embo Journal. 10: 3541-8. PMID 1655422 |
0.565 |
|
| 1990 |
Hughes RE, Hatfull GF, Rice P, Steitz TA, Grindley ND. Cooperativity mutants of the gamma delta resolvase identify an essential interdimer interaction. Cell. 63: 1331-8. PMID 2175679 DOI: 10.1016/0092-8674(90)90428-H |
0.699 |
|
| 1990 |
Sanderson MR, Freemont PS, Rice PA, Goldman A, Hatfull GF, Grindley ND, Steitz TA. The crystal structure of the catalytic domain of the site-specific recombination enzyme gamma delta resolvase at 2.7 A resolution. Cell. 63: 1323-9. PMID 2175678 DOI: 10.1016/0092-8674(90)90427-G |
0.578 |
|
| 1990 |
Dröge P, Hatfull GF, Grindley ND, Cozzarelli NR. The two functional domains of gamma delta resolvase act on the same recombination site: implications for the mechanism of strand exchange. Proceedings of the National Academy of Sciences of the United States of America. 87: 5336-40. PMID 2164677 DOI: 10.1073/Pnas.87.14.5336 |
0.595 |
|
| 1989 |
Hatfull GF, Sanderson MR, Freemont PS, Raccuia PR, Grindley ND, Steitz TA. Preparation of heavy-atom derivatives using site-directed mutagenesis. Introduction of cysteine residues into gamma delta resolvase. Journal of Molecular Biology. 208: 661-7. PMID 2553982 DOI: 10.1016/0022-2836(89)90156-3 |
0.558 |
|
| 1989 |
Rimphanitchayakit V, Hatfull GF, Grindley ND. The 43 residue DNA binding domain of gamma delta resolvase binds adjacent major and minor grooves of DNA. Nucleic Acids Research. 17: 1035-50. PMID 2537948 DOI: 10.1093/Nar/17.3.1035 |
0.584 |
|
| 1988 |
Hatfull G, Bankier AT, Barrell BG, Farrell PJ. Sequence analysis of Raji Epstein-Barr virus DNA. Virology. 164: 334-40. PMID 2835854 DOI: 10.1016/0042-6822(88)90546-6 |
0.426 |
|
| 1988 |
Falvey E, Hatfull GF, Grindley ND. Uncoupling of the recombination and topoisomerase activities of the gamma delta resolvase by a mutation at the crossover point. Nature. 332: 861-3. PMID 2833710 DOI: 10.1038/332861A0 |
0.625 |
|
| 1987 |
Derbyshire KM, Hatfull G, Willetts N. Mobilization of the non-conjugative plasmid RSF1010: a genetic and DNA sequence analysis of the mobilization region. Molecular & General Genetics : Mgg. 206: 161-8. PMID 3033438 DOI: 10.1007/Bf00326552 |
0.433 |
|
| 1987 |
Hatfull GF, Noble SM, Grindley ND. The gamma delta resolvase induces an unusual DNA structure at the recombinational crossover point. Cell. 49: 103-10. PMID 3030563 DOI: 10.1016/0092-8674(87)90760-4 |
0.593 |
|
| 1986 |
Gill DR, Hatfull GF, Salmond GPC. A new cell division operon in Escherichia coli Mgg Molecular &Amp; General Genetics. 205: 134-145. PMID 3025556 DOI: 10.1007/Bf02428043 |
0.388 |
|
| 1986 |
Hatfull GF, Grindley ND. Analysis of gamma delta resolvase mutants in vitro: evidence for an interaction between serine-10 of resolvase and site I of res. Proceedings of the National Academy of Sciences of the United States of America. 83: 5429-33. PMID 3016704 DOI: 10.1073/Pnas.83.15.5429 |
0.65 |
|
| 1986 |
Hatfull GF, Joyce CM. Deletion of the spf (spot 42 RNA) gene of Escherichia coli Journal of Bacteriology. 166: 746-750. PMID 2940230 DOI: 10.1128/Jb.166.3.746-750.1986 |
0.351 |
|
| 1985 |
Haring V, Scholz P, Scherzinger E, Frey J, Derbyshire K, Hatfull G, Willetts NS, Bagdasarian M. Protein RepC is involved in copy number control of the broad host range plasmid RSF1010 Proceedings of the National Academy of Sciences of the United States of America. 82: 6090-6094. PMID 3898079 DOI: 10.1073/Pnas.82.18.6090 |
0.369 |
|
| 1984 |
Robinson AC, Kenan DJ, Hatfull GF, Sullivan NF, Spiegelberg R, Donachie WD. DNA sequence and transcriptional organization of essential cell division genes ftsQ and ftsA of Escherichia coli: Evidence for overlapping transcriptional units Journal of Bacteriology. 160: 546-555. PMID 6094474 |
0.704 |
|
| 1984 |
Baer R, Bankier AT, Biggin MD, Deininger PL, Farrell PJ, Gibson TJ, Hatfull G, Hudson GS, Satchwell SC, Séguin C. DNA sequence and expression of the B95-8 Epstein-Barr virus genome Nature. 310: 207-211. PMID 6087149 DOI: 10.1038/310207A0 |
0.398 |
|
| 1980 |
Begg KJ, Hatfull GF, Donachie WD. Identification of new genes in a cell envelope-cell division gene cluster of Escherichia coli: Cell division gene ftsQ Journal of Bacteriology. 144: 435-437. PMID 6998961 |
0.651 |
|
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