Emily Z. Guo - Related publications

Affiliations: 
2006-2012 Life Sciences Institute University of Michigan, Ann Arbor, Ann Arbor, MI 
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Maryam A, Khalid RR, Vedithi SC, Ece A, Çınaroğlu SS, Siddiqi AR, Blundell TL. Exploring the structural basis of conformational heterogeneity and autoinhibition of human cGMP-specific protein kinase Iα through computational modelling and molecular dynamics simulations. Computational and Structural Biotechnology Journal. 18: 1625-1638. PMID 32670503 DOI: 10.1016/j.csbj.2020.06.016   
2020 Bolgov A, Korban S, Luzik D, Zhemkov V, Kim M, Rogacheva O, Bezprozvanny I. Crystal structure of the SH3 domain of growth factor receptor-bound protein 2. Acta Crystallographica. Section F, Structural Biology Communications. 76: 263-270. PMID 32510467 DOI: 10.1107/S2053230X20007232   
2020 Bhat AS, Kinch LN, Grishin NV. β-Strand-mediated interactions of protein domains. Proteins. PMID 32543729 DOI: 10.1002/prot.25970   
2020 Visconti L, Toto A, Jarvis JA, Troilo F, Malagrinò F, De Simone A, Gianni S. Demonstration of Binding Induced Structural Plasticity in a SH2 Domain. Frontiers in Molecular Biosciences. 7: 89. PMID 32528972 DOI: 10.3389/fmolb.2020.00089   
2020 Lam WW, Sun K, Zhang H, Au SW. Crystal Structure of Flagellar Export Chaperone FliS in Complex With Flagellin and HP1076 of . Frontiers in Microbiology. 11: 787. PMID 32508757 DOI: 10.3389/fmicb.2020.00787   
2020 Vignesh R, Aradhyam GK. Change in domain cooperativity drives function of calnuc. Biochemistry. PMID 32543177 DOI: 10.1021/acs.biochem.0c00207   
2020 Cao Y, Park SJ, Im W. A Systematic Analysis of Protein-Carbohydrate Interactions in the PDB. Glycobiology. PMID 32614943 DOI: 10.1093/glycob/cwaa062   
2020 Zhu M, Ou D, Khan MH, Zhao S, Zhu Z, Niu L. Structural insights into the formation of oligomeric state by a type I Hsp40 chaperone. Biochimie. PMID 32621942 DOI: 10.1016/j.biochi.2020.06.009   
2020 Marasco M, Carlomagno T. Specificity and regulation of phosphotyrosine signaling through SH2 domains. Journal of Structural Biology: X. 4: 100026. PMID 32647828 DOI: 10.1016/j.yjsbx.2020.100026   
2020 Tomiczek B, Delewski W, Nierzwicki L, Stolarska M, Grochowina I, Schilke B, Dutkiewicz R, Uzarska MA, Ciesielski SJ, Czub J, Craig EA, Marszalek J. Two-step mechanism of J-domain action in driving Hsp70 function. Plos Computational Biology. 16: e1007913. PMID 32479549 DOI: 10.1371/journal.pcbi.1007913   
2020 Piepoli S, Alt AO, Atilgan C, Mancini EJ, Erman B. Structural analysis of the PATZ1 BTB domain homodimer. Acta Crystallographica. Section D, Structural Biology. 76: 581-593. PMID 32496219 DOI: 10.1107/S2059798320005355   
2020 Manne K, Chattopadhyay D, Agarwal V, Blom AM, Khare B, Chakravarthy S, Chang C, Ton-That H, Narayana SVL. Novel structure of the N-terminal helical domain of BibA, a group B streptococcus immunogenic bacterial adhesin. Acta Crystallographica. Section D, Structural Biology. 76: 759-770. PMID 32744258 DOI: 10.1107/S2059798320008116   
2020 Thomas C, Tampé R. Structural and Mechanistic Principles of ABC Transporters. Annual Review of Biochemistry. 89: 605-636. PMID 32569521 DOI: 10.1146/annurev-biochem-011520-105201   
2020 Geiger JH, Ghanbarpour A, Santos EM, Pinger CH, Assar Z, Nasr SH, Vasileiou C, Spence D, Borhan BH. Human Cellular Retinol Binding Protein II Forms a Domain-Swapped Trimer Representing a Novel Fold and a New Template for Protein Engineering. Chembiochem : a European Journal of Chemical Biology. PMID 32608180 DOI: 10.1002/cbic.202000405   
2020 Kaynak BT, Bahar I, Doruker P. Essential site scanning analysis: A new approach for detecting sites that modulate the dispersion of protein global motions. Computational and Structural Biotechnology Journal. 18: 1577-1586. PMID 32637054 DOI: 10.1016/j.csbj.2020.06.020   
2020 Lee BG, Merkel F, Allegretti M, Hassler M, Cawood C, Lecomte L, O'Reilly FJ, Sinn LR, Gutierrez-Escribano P, Kschonsak M, Bravo S, Nakane T, Rappsilber J, Aragon L, Beck M, et al. Cryo-EM structures of holo condensin reveal a subunit flip-flop mechanism. Nature Structural & Molecular Biology. PMID 32661420 DOI: 10.1038/s41594-020-0457-x   
2020 Butt BG, Scourfield EJ, Graham SC. Non-native fold of the putative VPS39 zinc finger domain. Wellcome Open Research. 5: 154. PMID 32724865 DOI: 10.12688/wellcomeopenres.16078.1   
2020 Martin-Martin I, Paige A, Valenzuela Leon PC, Gittis AG, Kern O, Bonilla B, Chagas AC, Ganesan S, Smith LB, Garboczi DN, Calvo E. ADP binding by the Culex quinquefasciatus mosquito D7 salivary protein enhances blood feeding on mammals. Nature Communications. 11: 2911. PMID 32518308 DOI: 10.1038/s41467-020-16665-z   
2020 Chang TH, Hsieh FL, Smallwood PM, Gabelli SB, Nathans J. Structure of the RECK CC domain, an evolutionary anomaly. Proceedings of the National Academy of Sciences of the United States of America. PMID 32541044 DOI: 10.1073/pnas.2006332117   
2020 Patarroyo MA, Molina-Franky J, Gómez M, Arévalo-Pinzón G, Patarroyo ME. Hotspots in and RBC Receptor-Ligand Interactions: Key Pieces for Inhibiting Malarial Parasite Invasion. International Journal of Molecular Sciences. 21. PMID 32630804 DOI: 10.3390/ijms21134729   
2020 Ye Q, West AMV, Silletti S, Corbett KD. Architecture and self-assembly of the SARS-CoV-2 nucleocapsid protein. Protein Science : a Publication of the Protein Society. PMID 32654247 DOI: 10.1002/pro.3909   
2020 Davies JR, Britton A, Liu SM, Acharya KR. High resolution crystal structures of the botulinum neurotoxin binding domains from subtypes A5 and A6. Febs Open Bio. PMID 32654405 DOI: 10.1002/2211-5463.12931   
2020 Cook EC, Creamer TP. Influence of Electrostatic Forces on the Association Kinetics and Conformational Ensemble of an Intrinsically Disordered Protein. Proteins. PMID 32654182 DOI: 10.1002/prot.25979   
2020 Medina E, Villalobos P, Hamilton GL, Komives EA, Sanabria H, Ramírez-Sarmiento CA, Babul J. Intrinsically disordered regions of the DNA-binding domain of human FoxP1 facilitate domain swapping. Journal of Molecular Biology. PMID 32735805 DOI: 10.1016/j.jmb.2020.07.017   
2020 Adhikari P, Li N, Shin M, Steinmetz NF, Twarock R, Podgornik R, Ching WY. Intra- and intermolecular atomic-scale interactions in the receptor binding domain of SARS-CoV-2 spike protein: implication for ACE2 receptor binding. Physical Chemistry Chemical Physics : Pccp. PMID 32756685 DOI: 10.1039/d0cp03145c   
2020 Hoffmann D, Diderrich R, Reithofer V, Friederichs S, Kock M, Essen LO, Mösch HU. Functional reprogramming of epithelial adhesins: the role of conserved and variable structural motifs in ligand binding. The Journal of Biological Chemistry. PMID 32669365 DOI: 10.1074/jbc.RA120.013968   
2020 Lou JW, Mazhab-Jafari MT. Steric occlusion regulates proximal interactions of acyl carrier protein domain in fungal fatty acid synthase. Communications Biology. 3: 274. PMID 32471977 DOI: 10.1038/s42003-020-0997-y   
2020 Lara J, Diacovich L, Trajtenberg F, Larrieux N, Malchiodi EL, Fernández MM, Gago G, Gramajo H, Buschiazzo A. Mycobacterium tuberculosis FasR senses long fatty acyl-CoA through a tunnel and a hydrophobic transmission spine. Nature Communications. 11: 3703. PMID 32710080 DOI: 10.1038/s41467-020-17504-x   
2020 Schubeis T, Schwarzer TS, Le Marchand T, Stanek J, Movellan KT, Castiglione K, Pintacuda G, Andreas LB. Resonance assignment of the outer membrane protein AlkL in lipid bilayers by proton-detected solid-state NMR. Biomolecular Nmr Assignments. PMID 32607893 DOI: 10.1007/s12104-020-09964-5   
2020 Masutani M, Sakurai S, Shimizu T, Ohto U. Crystal structure of TEX101, a glycoprotein essential for male fertility, reveals the presence of tandemly arranged Ly6/uPAR domains. Febs Letters. PMID 32608065 DOI: 10.1002/1873-3468.13875   
2020 Jaworek MW, Ruggiero A, Graziano G, Winter R, Vitagliano L. On the extraordinary pressure stability of the Thermotoga maritima arginine binding protein and its folded fragments - a high-pressure FTIR spectroscopy study. Physical Chemistry Chemical Physics : Pccp. 22: 11244-11248. PMID 32400824 DOI: 10.1039/d0cp01618g   
2020 Watanabe Y, Watanabe Y, Watanabe S. Structural Basis for Phosphatidylethanolamine Biosynthesis by Bacterial Phosphatidylserine Decarboxylase. Structure (London, England : 1993). PMID 32402247 DOI: 10.1016/j.str.2020.04.006   
2020 Panchamia B, Raimalani V, Prashar V, Kumar M, Ratna Prabha C. Structural and Functional Characterisation of the Domains of Ubiquitin-Activating Enzyme (E1) of Saccharomyces cerevisiae. Cell Biochemistry and Biophysics. PMID 32583128 DOI: 10.1007/s12013-020-00924-3   
2020 Mickolajczyk KJ, Olinares PDB, Niu Y, Chen N, Warrington SE, Sasaki Y, Walz T, Chait BT, Kapoor TM. Long-range intramolecular allostery and regulation in the dynein-like AAA protein Mdn1. Proceedings of the National Academy of Sciences of the United States of America. PMID 32694211 DOI: 10.1073/pnas.2002792117   
2020 Min K, Yoon HJ, Park JY, Baidya M, Dwivedi-Agnihotri H, Maharana J, Chaturvedi M, Chung KY, Shukla AK, Lee HH. Crystal Structure of β-Arrestin 2 in Complex with CXCR7 Phosphopeptide. Structure (London, England : 1993). PMID 32579945 DOI: 10.1016/j.str.2020.06.002   
2020 Dai Y, Li Y, Wang L, Peng Z, Yang J. On monomeric and multimeric structures-based protein-ligand interactions. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 32750865 DOI: 10.1109/TCBB.2020.3002776   
2020 Na I, Choi S, Son SH, Uversky VN, Kim CG. Drug Discovery Targeting the Disorder-To-Order Transition Regions through the Conformational Diversity Mimicking and Statistical Analysis. International Journal of Molecular Sciences. 21. PMID 32722024 DOI: 10.3390/ijms21155248   
2020 Hosford CJ, Adams MC, Niu Y, Chappie JS. The N-terminal domain of Staphylothermus marinus McrB shares structural homology with PUA-like RNA binding proteins Journal of Structural Biology. PMID 32652237 DOI: 10.1016/j.jsb.2020.107572   
2020 Holmquist M, Ihms EC, Gollnick P, Wysocki VH, Foster MP. Population distributions from native mass spectrometry titrations reveal nearest-neighbor cooperativity in the ring-shaped oligomeric protein TRAP. Biochemistry. PMID 32558551 DOI: 10.1021/acs.biochem.0c00352   
2020 Chen Z, Wasney GA, Picaud S, Filippakopoulos P, Vedadi M, D'Angiolella V, Bullock AN. Identification of a PGXPP degron motif in dishevelled and structural basis for its binding to the E3 ligase KLHL12. Open Biology. 10: 200041. PMID 32574548 DOI: 10.1098/rsob.200041   
2020 Pokotylo I, Hellal D, Bouceba T, Hernandez-Martinez M, Kravets V, Leitao L, Espinasse C, Kleiner I, Ruelland E. Deciphering the Binding of Salicylic Acid to Chloroplastic GAPDH-A1. International Journal of Molecular Sciences. 21. PMID 32630078 DOI: 10.3390/ijms21134678   
2020 Oliver RC, Potrzebowski W, Najibi SM, Nors Pedersen M, Arleth L, Mahmoudi N, André I. Assembly of Capsids from Hepatitis B Virus Core Protein Progresses through Highly Populated Intermediates in Presence and Absence of RNA. Acs Nano. PMID 32672447 DOI: 10.1021/acsnano.0c03569   
2020 Potter ZE, Lau HT, Chakraborty S, Fang L, Guttman M, Ong SE, Fowler DM, Maly DJ. Parallel Chemoselective Profiling for Mapping Protein Structure. Cell Chemical Biology. PMID 32649906 DOI: 10.1016/j.chembiol.2020.06.014   
2020 Rozza AM, Menyhárd DK, Oláh J. Gas Sensing by Bacterial H-NOX Proteins: An MD Study. Molecules (Basel, Switzerland). 25. PMID 32585836 DOI: 10.3390/molecules25122882   
2020 Vondrova L, Kolesar P, Adamus M, Nociar M, Oliver AW, Palecek JJ. A role of the Nse4 kleisin and Nse1/Nse3 KITE subunits in the ATPase cycle of SMC5/6. Scientific Reports. 10: 9694. PMID 32546830 DOI: 10.1038/s41598-020-66647-w   
2020 Stelzl LL, Mavridou DAI, Saridakis E, Gonzalez D, Baldwin AJ, Ferguson SJ, Sansom MS, Redfield C. Local frustration determines loop opening during the catalytic cycle of an oxidoreductase. Elife. 9. PMID 32568066 DOI: 10.7554/eLife.54661   
2020 Yin J, Chen KM, Clark MJ, Hijazi M, Kumari P, Bai XC, Sunahara RK, Barth P, Rosenbaum DM. Structure of a D2 dopamine receptor-G-protein complex in a lipid membrane. Nature. PMID 32528175 DOI: 10.1038/s41586-020-2379-5   
2020 Hilger D, Kumar KK, Hu H, Pedersen MF, O'Brien ES, Giehm L, Jennings C, Eskici G, Inoue A, Lerch M, Mathiesen JM, Skiniotis G, Kobilka BK. Structural insights into differences in G protein activation by family A and family B GPCRs. Science (New York, N.Y.). 369. PMID 32732395 DOI: 10.1126/science.aba3373   
2020 Song WS, Hong HJ, Yoon SI. Structural study of the flagellar junction protein FlgL from Legionella pneumophila. Biochemical and Biophysical Research Communications. 529: 513-518. PMID 32703460 DOI: 10.1016/j.bbrc.2020.06.012   
2020 Le CA, Harvey DS, Aller SG. Structural definition of polyspecific compensatory ligand recognition by P-glycoprotein. Iucrj. 7: 663-672. PMID 32695413 DOI: 10.1107/S2052252520005709