Shu-Bing Qian - Publications

Affiliations: 
Molecular Biology and Genetics Cornell University, Ithaca, NY, United States 
Area:
Molecular Biology, Biochemistry

57 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Mao Y, Jia L, Dong L, Shu XE, Qian SB. Start codon-associated ribosomal frameshifting mediates nutrient stress adaptation. Nature Structural & Molecular Biology. 30: 1816-1825. PMID 37957305 DOI: 10.1038/s41594-023-01119-z  0.308
2023 Zhang F, Ji Q, Chaturvedi J, Morales M, Mao Y, Meng X, Dong L, Deng J, Qian SB, Xiang Y. Human SAMD9 is a poxvirus-activatable anticodon nuclease inhibiting codon-specific protein synthesis. Science Advances. 9: eadh8502. PMID 37285440 DOI: 10.1126/sciadv.adh8502  0.302
2023 Kong S, Zhu M, Scarpin MR, Pan D, Jia L, Martinez RE, Alamos S, Vadde BVL, Garcia HG, Qian SB, Brunkard JO, Roeder AHK. DRMY1 promotes robust morphogenesis by sustaining translation of a hormone signaling protein. Biorxiv : the Preprint Server For Biology. PMID 37066395 DOI: 10.1101/2023.04.07.536060  0.333
2023 Mao Y, Jia L, Dong L, Shu XE, Qian SB. Start codon-associated ribosomal frameshifting mediates nutrient stress adaptation. Biorxiv : the Preprint Server For Biology. PMID 36824937 DOI: 10.1101/2023.02.15.528768  0.308
2022 Krokowski D, Jobava R, Szkop KJ, Chen CW, Fu X, Venus S, Guan BJ, Wu J, Gao Z, Banaszuk W, Tchorzewski M, Mu T, Ropelewski P, Merrick WC, Mao Y, ... ... Qian SB, et al. Stress-induced perturbations in intracellular amino acids reprogram mRNA translation in osmoadaptation independently of the ISR. Cell Reports. 40: 111092. PMID 35858571 DOI: 10.1016/j.celrep.2022.111092  0.391
2021 Jia L, Qian SB. Therapeutic mRNA Engineering from Head to Tail. Accounts of Chemical Research. 54: 4272-4282. PMID 34756012 DOI: 10.1021/acs.accounts.1c00541  0.347
2021 Zhang Y, Swanda RV, Nie L, Liu X, Wang C, Lee H, Lei G, Mao C, Koppula P, Cheng W, Zhang J, Xiao Z, Zhuang L, Fang B, Chen J, ... Qian SB, et al. mTORC1 couples cyst(e)ine availability with GPX4 protein synthesis and ferroptosis regulation. Nature Communications. 12: 1589. PMID 33707434 DOI: 10.1038/s41467-021-21841-w  0.396
2020 Jia L, Mao Y, Ji Q, Dersh D, Yewdell JW, Qian SB. Decoding mRNA translatability and stability from the 5' UTR. Nature Structural & Molecular Biology. PMID 32719458 DOI: 10.1038/S41594-020-0465-X  0.767
2020 Shu XE, V Swanda R, Qian SB. Nutrient Control of mRNA Translation. Annual Review of Nutrition. PMID 32631146 DOI: 10.1146/Annurev-Nutr-120919-041411  0.475
2020 Mao Y, Qian SB. Ribosome-guided piRNA production. Nature Cell Biology. 22: 141-142. PMID 32015434 DOI: 10.1038/S41556-020-0464-5  0.32
2019 Mao Y, Dong L, Liu XM, Guo J, Ma H, Shen B, Qian SB. mA in mRNA coding regions promotes translation via the RNA helicase-containing YTHDC2. Nature Communications. 10: 5332. PMID 31767846 DOI: 10.1038/S41467-019-13317-9  0.327
2019 Orr MW, Mao Y, Storz G, Qian SB. Alternative ORFs and small ORFs: shedding light on the dark proteome. Nucleic Acids Research. PMID 31504789 DOI: 10.1093/Nar/Gkz734  0.472
2019 King AP, Marker SC, Swanda RV, Woods JJ, Qian SB, Wilson JJ. A Rhenium Isonitrile Complex Induces Unfolded Protein Response-Mediated Apoptosis in Cancer Cells. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 31090971 DOI: 10.1002/Chem.201902223  0.388
2019 Wei J, Kishton RJ, Angel M, Conn CS, Dalla-Venezia N, Marcel V, Vincent A, Catez F, Ferré S, Ayadi L, Marchand V, Dersh D, Gibbs JS, Ivanov IP, Fridlyand N, ... ... Qian SB, et al. Ribosomal Proteins Regulate MHC Class I Peptide Generation for Immunosurveillance. Molecular Cell. PMID 30712990 DOI: 10.1016/J.Molcel.2018.12.020  0.744
2019 Liu XM, Qian SB. Assembly en route. Nature Structural & Molecular Biology. PMID 30692645 DOI: 10.1038/S41594-019-0185-2  0.411
2018 Zhang X, Shu XE, Qian SB. O-GlcNAc modification of eIF4GI acts as a translational switch in heat shock response. Nature Chemical Biology. PMID 30127386 DOI: 10.1038/S41589-018-0120-6  0.362
2018 Mazor KM, Dong L, Mao Y, Swanda RV, Qian SB, Stipanuk MH. Effects of single amino acid deficiency on mRNA translation are markedly different for methionine versus leucine. Scientific Reports. 8: 8076. PMID 29795412 DOI: 10.1038/S41598-018-26254-2  0.434
2018 Zhou J, Wan J, Shu XE, Mao Y, Liu XM, Yuan X, Zhang X, Hess ME, Brüning JC, Qian SB. N6-Methyladenosine Guides mRNA Alternative Translation during Integrated Stress Response. Molecular Cell. PMID 29429926 DOI: 10.1016/J.Molcel.2018.01.019  0.432
2017 Li X, Xiong X, Zhang M, Wang K, Chen Y, Zhou J, Mao Y, Lv J, Yi D, Chen XW, Wang C, Qian SB, Yi C. Base-Resolution Mapping Reveals Distinct m(1)A Methylome in Nuclear- and Mitochondrial-Encoded Transcripts. Molecular Cell. PMID 29107537 DOI: 10.1016/J.Molcel.2017.10.019  0.301
2017 Coots RA, Liu XM, Mao Y, Dong L, Zhou J, Wan J, Zhang X, Qian SB. m(6)A Facilitates eIF4F-Independent mRNA Translation. Molecular Cell. PMID 29107534 DOI: 10.1016/J.Molcel.2017.10.002  0.437
2017 Tang L, Morris J, Wan J, Moore C, Fujita Y, Gillaspie S, Aube E, Nanda J, Marques M, Jangal M, Anderson A, Cox C, Hiraishi H, Dong L, Saito H, ... ... Qian SB, et al. Competition between translation initiation factor eIF5 and its mimic protein 5MP determines non-AUG initiation rate genome-wide. Nucleic Acids Research. PMID 28981728 DOI: 10.1093/Nar/Gkx808  0.417
2017 Moore C, Gillaspie S, Wan J, Aube E, Anderson A, Singh C, Witcher M, Topisirovic I, Qian S, Asano K. Abstract A12: Role of eIF5-mimic protein 1 (5MP1) for translational control in cancer Cancer Research. 77. DOI: 10.1158/1538-7445.Transcontrol16-A12  0.415
2016 Saikia M, Wang X, Mao Y, Wan J, Pan T, Qian SB. Codon optimality controls differential mRNA translation during amino acid starvation. Rna (New York, N.Y.). PMID 27613579 DOI: 10.1261/Rna.058180.116  0.406
2016 Liu B, Qian SB. Characterizing inactive ribosomes in translational profiling. Translation (Austin, Tex.). 4: e1138018. PMID 27335722 DOI: 10.1080/21690731.2015.1138018  0.34
2016 Qian SB. Step back for seminal translation. Nature Structural & Molecular Biology. 23: 362-3. PMID 27142320 DOI: 10.1038/Nsmb.3217  0.336
2016 Gao X, Wan J, Qian SB. Genome-Wide Profiling of Alternative Translation Initiation Sites. Methods in Molecular Biology (Clifton, N.J.). 1358: 303-16. PMID 26463392 DOI: 10.1007/978-1-4939-3067-8_19  0.419
2015 Meyer KD, Patil DP, Zhou J, Zinoviev A, Skabkin MA, Elemento O, Pestova TV, Qian SB, Jaffrey SR. 5' UTR m(6)A Promotes Cap-Independent Translation. Cell. 163: 999-1010. PMID 26593424 DOI: 10.1016/J.Cell.2015.10.012  0.412
2015 Zhou J, Wan J, Gao X, Zhang X, Jaffrey SR, Qian SB. Dynamic m(6)A mRNA methylation directs translational control of heat shock response. Nature. PMID 26458103 DOI: 10.1038/Nature15377  0.384
2015 Zhang X, Gao X, Coots RA, Conn CS, Liu B, Qian SB. Translational control of the cytosolic stress response by mitochondrial ribosomal protein L18. Nature Structural & Molecular Biology. 22: 404-10. PMID 25866880 DOI: 10.1038/Nsmb.3010  0.78
2015 Gao X, Wan J, Liu B, Ma M, Shen B, Qian SB. Quantitative profiling of initiating ribosomes in vivo. Nature Methods. 12: 147-53. PMID 25486063 DOI: 10.1038/Nmeth.3208  0.426
2014 Han Y, Gao X, Liu B, Wan J, Zhang X, Qian SB. Ribosome profiling reveals sequence-independent post-initiation pausing as a signature of translation. Cell Research. 24: 842-51. PMID 24903108 DOI: 10.1038/Cr.2014.74  0.439
2014 Liu B, Qian SB. Translational reprogramming in cellular stress response. Wiley Interdisciplinary Reviews. Rna. 5: 301-15. PMID 24375939 DOI: 10.1002/Wrna.1212  0.523
2014 Wan J, Qian SB. TISdb: a database for alternative translation initiation in mammalian cells. Nucleic Acids Research. 42: D845-50. PMID 24203712 DOI: 10.1093/Nar/Gkt1085  0.377
2013 Sherman MY, Qian SB. Less is more: improving proteostasis by translation slow down. Trends in Biochemical Sciences. 38: 585-91. PMID 24126073 DOI: 10.1016/J.Tibs.2013.09.003  0.55
2013 Conn CS, Qian SB. Nutrient signaling in protein homeostasis: an increase in quantity at the expense of quality. Science Signaling. 6: ra24. PMID 23592839 DOI: 10.1126/Scisignal.2003520  0.794
2013 Liu B, Han Y, Qian SB. Cotranslational response to proteotoxic stress by elongation pausing of ribosomes. Molecular Cell. 49: 453-63. PMID 23290916 DOI: 10.1016/J.Molcel.2012.12.001  0.52
2012 Liu B, Conn CS, Qian SB. Viewing folding of nascent polypeptide chains from ribosomes. Expert Review of Proteomics. 9: 579-81. PMID 23256666 DOI: 10.1586/Epr.12.57  0.804
2012 Stern-Ginossar N, Weisburd B, Michalski A, Le VT, Hein MY, Huang SX, Ma M, Shen B, Qian SB, Hengel H, Mann M, Ingolia NT, Weissman JS. Decoding human cytomegalovirus. Science (New York, N.Y.). 338: 1088-93. PMID 23180859 DOI: 10.1126/Science.1227919  0.396
2012 Klionsky DJ, Abdalla FC, Abeliovich H, Abraham RT, Acevedo-Arozena A, Adeli K, Agholme L, Agnello M, Agostinis P, Aguirre-Ghiso JA, Ahn HJ, Ait-Mohamed O, Ait-Si-Ali S, Akematsu T, Akira S, ... ... Qian SB, et al. Guidelines for the use and interpretation of assays for monitoring autophagy. Autophagy. 8: 445-544. PMID 22966490 DOI: 10.4161/Auto.19496  0.504
2012 Lee S, Liu B, Lee S, Huang SX, Shen B, Qian SB. Global mapping of translation initiation sites in mammalian cells at single-nucleotide resolution. Proceedings of the National Academy of Sciences of the United States of America. 109: E2424-32. PMID 22927429 DOI: 10.1073/Pnas.1207846109  0.409
2012 Han Y, David A, Liu B, Magadán JG, Bennink JR, Yewdell JW, Qian SB. Monitoring cotranslational protein folding in mammalian cells at codon resolution. Proceedings of the National Academy of Sciences of the United States of America. 109: 12467-72. PMID 22802618 DOI: 10.1073/Pnas.1208138109  0.762
2011 Liu B, Qian SB. Translational regulation in nutrigenomics. Advances in Nutrition (Bethesda, Md.). 2: 511-9. PMID 22332093 DOI: 10.3945/An.111.001057  0.472
2011 Zhang X, Qian SB. Chaperone-mediated hierarchical control in targeting misfolded proteins to aggresomes. Molecular Biology of the Cell. 22: 3277-88. PMID 21775628 DOI: 10.1091/Mbc.E11-05-0388  0.507
2011 Conn CS, Qian SB. mTOR signaling in protein homeostasis: less is more? Cell Cycle (Georgetown, Tex.). 10: 1940-7. PMID 21555915 DOI: 10.4161/Cc.10.12.15858  0.779
2011 Sun J, Conn CS, Han Y, Yeung V, Qian SB. PI3K-mTORC1 attenuates stress response by inhibiting cap-independent Hsp70 translation. The Journal of Biological Chemistry. 286: 6791-800. PMID 21177857 DOI: 10.1074/Jbc.M110.172882  0.79
2010 Qian SB, Zhang X, Sun J, Bennink JR, Yewdell JW, Patterson C. mTORC1 links protein quality and quantity control by sensing chaperone availability. The Journal of Biological Chemistry. 285: 27385-95. PMID 20605781 DOI: 10.1074/Jbc.M110.120295  0.754
2009 Qian SB, Waldron L, Choudhary N, Klevit RE, Chazin WJ, Patterson C. Engineering a ubiquitin ligase reveals conformational flexibility required for ubiquitin transfer Journal of Biological Chemistry. 284: 26797-26802. PMID 19648119 DOI: 10.1074/Jbc.M109.032334  0.503
2009 McDonough H, Charles PC, Hilliard EG, Qian SB, Min JN, Portbury A, Cyr DM, Patterson C. Stress-dependent Daxx-CHIP interaction suppresses the p53 apoptotic program. The Journal of Biological Chemistry. 284: 20649-59. PMID 19465479 DOI: 10.1074/jbc.M109.011767  0.532
2006 Qian SB, Reits E, Neefjes J, Deslich JM, Bennink JR, Yewdell JW. Tight linkage between translation and MHC class I peptide ligand generation implies specialized antigen processing for defective ribosomal products Journal of Immunology. 177: 227-233. PMID 16785518 DOI: 10.4049/Jimmunol.177.1.227  0.696
2006 Qian SB, McDonough H, Boellmann F, Cyr DM, Patterson C. CHIP-mediated stress recovery by sequential ubiquitination of substrates and Hsp70. Nature. 440: 551-5. PMID 16554822 DOI: 10.1038/Nature04600  0.579
2006 Qian SB, Princiotta MF, Bennink JR, Yewdell JW. Characterization of rapidly degraded polypeptides in mammalian cells reveals a novel layer of nascent protein quality control. The Journal of Biological Chemistry. 281: 392-400. PMID 16263705 DOI: 10.1074/Jbc.M509126200  0.796
2005 Dai Q, Qian SB, Li HH, McDonough H, Borchers C, Huang D, Takayama S, Younger JM, Ren HY, Cyr DM, Patterson C. Regulation of the cytoplasmic quality control protein degradation pathway by BAG2. The Journal of Biological Chemistry. 280: 38673-81. PMID 16169850 DOI: 10.1074/Jbc.M507986200  0.608
2005 Qian SB, Bennink JR, Yewdell JW. Quantitating defective ribosome products. Methods in Molecular Biology (Clifton, N.J.). 301: 271-81. PMID 15917638 DOI: 10.1385/1-59259-895-1:271  0.713
2004 Shaffer AL, Shapiro-Shelef M, Iwakoshi NN, Lee AH, Qian SB, Zhao H, Yu X, Yang L, Tan BK, Rosenwald A, Hurt EM, Petroulakis E, Sonenberg N, Yewdell JW, Calame K, et al. XBP1, downstream of Blimp-1, expands the secretory apparatus and other organelles, and increases protein synthesis in plasma cell differentiation. Immunity. 21: 81-93. PMID 15345222 DOI: 10.1016/J.Immuni.2004.06.010  0.645
2003 Princiotta MF, Finzi D, Qian SB, Gibbs J, Schuchmann S, Buttgereit F, Bennink JR, Yewdell JW. Quantitating protein synthesis, degradation, and endogenous antigen processing. Immunity. 18: 343-54. PMID 12648452 DOI: 10.1016/S1074-7613(03)00051-7  0.799
2002 Qian SB, Ott DE, Schubert U, Bennink JR, Yewdell JW. Fusion proteins with COOH-terminal ubiquitin are stable and maintain dual functionality in vivo. The Journal of Biological Chemistry. 277: 38818-26. PMID 12163494 DOI: 10.1074/Jbc.M205547200  0.716
2000 Qian SB, Chen SS. Blocked transport of soluble K(b) molecules containing connecting peptide segment involved in calnexin association International Immunology. 12: 1409-1416. PMID 11007758 DOI: 10.1093/Intimm/12.10.1409  0.345
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