James Bower - Publications

Affiliations: 
The University of Texas at San Antonio, San Antonio, TX, United States 
Area:
Computation
Website:
http://bower-lab.org/

70 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Kidd K, Davey N, Polani D, Bower JM, Steuber V. Using transfer entropy to study synaptic integration in Purkinje cells Bmc Neuroscience. 16. DOI: 10.1186/1471-2202-16-S1-P236  0.584
2014 Kidd K, Bower JM, Polani D, Davey N, Steuber V. Information theoretical analysis of differences in information transmission in cerebellar Purkinje cells across species Bmc Neuroscience. 15. DOI: 10.1186/1471-2202-15-S1-P40  0.568
2013 Kidd K, Cornelis H, Bower JM, Polani D, Davey N, Steuber V. The implications of evolutionary changes in the dendritic morphology of cerebellar Purkinje cells for information processing Bmc Neuroscience. 14. DOI: 10.1186/1471-2202-14-S1-P373  0.568
2013 Cornelis H, Bampasakis D, Steuber V, Bower JM. Interoperability in the GENESIS 3.0 Software Federation: the NEURON Simulator as an Example Bmc Neuroscience. 14. DOI: 10.1186/1471-2202-14-S1-P33  0.557
2012 Cornelis H, Rodriguez AL, Coop AD, Bower JM. Python as a federation tool for GENESIS 3.0. Plos One. 7: e29018. PMID 22276101 DOI: 10.1371/journal.pone.0029018  0.718
2012 Cornelis H, Coop AD, Bower JM. A federated design for a neurobiological simulation engine: the CBI federated software architecture. Plos One. 7: e28956. PMID 22242154 DOI: 10.1371/journal.pone.0028956  0.715
2011 Petacchi A, Kaernbach C, Ratnam R, Bower JM. Increased activation of the human cerebellum during pitch discrimination: a positron emission tomography (PET) study. Hearing Research. 282: 35-48. PMID 22000998 DOI: 10.1016/j.heares.2011.09.008  0.642
2010 Petacchi A, Kaernbach C, Ratnam R, Robin DA, Bower JM. Enhanced activation of cerebellar regions during pitch discrimination in humans: a PET study Bmc Neuroscience. 11. DOI: 10.1186/1471-2202-11-S1-P84  0.637
2010 Wang Z, Robbins K, Wang Y, Livi C, Coop AD, Santamaria F, Wenk C, Bower JM. Building an institutional base for Computational Neuroscience: the CBI at UTSA/UTHSCSA Bmc Neuroscience. 11. DOI: 10.1186/1471-2202-11-S1-P67  0.448
2010 Santamaria F, Bower JM. Hodgkin-Huxley Models Encyclopedia of Neuroscience. 1173-1180. DOI: 10.1016/B978-008045046-9.01413-3  0.45
2009 Lu H, Esquivel AV, Bower JM. 3D electron microscopic reconstruction of segments of rat cerebellar Purkinje cell dendrites receiving ascending and parallel fiber granule cell synaptic inputs. The Journal of Comparative Neurology. 514: 583-94. PMID 19363797 DOI: 10.1002/cne.22041  0.48
2007 Santamaria F, Tripp PG, Bower JM. Feedforward inhibition controls the spread of granule cell-induced Purkinje cell activity in the cerebellar cortex. Journal of Neurophysiology. 97: 248-63. PMID 17050824 DOI: 10.1152/jn.01098.2005  0.543
2007 Lu H, Lobb C, Wu Y, Bower JM. Modeling TRPC1 mediated slow EPSPs in cerebellar Purkinje cells Bmc Neuroscience. 8. DOI: 10.1186/1471-2202-8-S2-P98  0.464
2007 Cornelis H, Lu H, Esquivel A, Bower JM. Modeling a single dendritic compartment using Neurospaces and GENESIS-3 Bmc Neuroscience. 8. DOI: 10.1186/1471-2202-8-S2-P3  0.408
2006 Leergaard TB, Lillehaug S, De Schutter E, Bower JM, Bjaalie JG. Topographical organization of pathways from somatosensory cortex through the pontine nuclei to tactile regions of the rat cerebellar hemispheres. The European Journal of Neuroscience. 24: 2801-12. PMID 17156205 DOI: 10.1111/J.1460-9568.2006.05150.X  0.536
2006 Fontanini A, Bower JM. Slow-waves in the olfactory system: an olfactory perspective on cortical rhythms. Trends in Neurosciences. 29: 429-37. PMID 16842864 DOI: 10.1016/j.tins.2006.06.013  0.622
2005 Shumway C, Morissette J, Bower JM. Mechanisms underlying reorganization of fractured tactile cerebellar maps after deafferentation in developing and adult rats. Journal of Neurophysiology. 94: 2630-43. PMID 15987764 DOI: 10.1152/jn.00161.2005  0.702
2005 Lu H, Hartmann MJ, Bower JM. Correlations between purkinje cell single-unit activity and simultaneously recorded field potentials in the immediately underlying granule cell layer. Journal of Neurophysiology. 94: 1849-60. PMID 15928051 DOI: 10.1152/jn.01275.2004  0.663
2005 Fontanini A, Bower JM. Variable coupling between olfactory system activity and respiration in ketamine/xylazine anesthetized rats. Journal of Neurophysiology. 93: 3573-81. PMID 15689385 DOI: 10.1152/jn.01320.2004  0.634
2005 Santamaria F, Bower JM. Background synaptic activity modulates the response of a modeled purkinje cell to paired afferent input. Journal of Neurophysiology. 93: 237-50. PMID 15306625 DOI: 10.1152/jn.00458.2004  0.55
2003 Fontanini A, Spano P, Bower JM. Ketamine-xylazine-induced slow (< 1.5 Hz) oscillations in the rat piriform (olfactory) cortex are functionally correlated with respiration. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 23: 7993-8001. PMID 12954860  0.636
2003 Mamlouk AM, Chee-Ruiter C, Hofmann UG, Bower JM. Quantifying olfactory perception: Mapping olfactory perception space by using multidimensional scaling and self-organizing maps Neurocomputing. 52: 591-597. DOI: 10.1016/S0925-2312(02)00805-6  0.709
2002 Santamaria F, Jaeger D, De Schutter E, Bower JM. Modulatory effects of parallel fiber and molecular layer interneuron synaptic activity on purkinje cell responses to ascending segment input: a modeling study. Journal of Computational Neuroscience. 13: 217-35. PMID 12226562 DOI: 10.1023/A:1020266315730  0.724
2002 Brown IE, Bower JM. The influence of somatosensory cortex on climbing fiber responses in the lateral hemispheres of the rat cerebellum after peripheral tactile stimulation. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 22: 6819-29. PMID 12151562  0.422
2002 Freiwald WA, Stemmann H, Wannig A, Kreiter AK, Hofmann UG, Hills MD, Kovacs GTA, Kewley DT, Bower JM, Etzold A, Wilke SD, Eurich CW. Stimulus representation in rat primary visual cortex: Multi-electrode recordings with micro-machined silicon probes and estimation theory Neurocomputing. 44: 407-416. DOI: 10.1016/S0925-2312(02)00391-0  0.448
2001 Sobel N, Thomason ME, Stappen I, Tanner CM, Tetrud JW, Bower JM, Sullivan EV, Gabrieli JD. An impairment in sniffing contributes to the olfactory impairment in Parkinson's disease. Proceedings of the National Academy of Sciences of the United States of America. 98: 4154-9. PMID 11259673 DOI: 10.1073/Pnas.071061598  0.606
2001 Brown IE, Bower JM. Congruence of mossy fiber and climbing fiber tactile projections in the lateral hemispheres of the rat cerebellum. The Journal of Comparative Neurology. 429: 59-70. PMID 11086289 DOI: 10.1002/1096-9861(20000101)429:1<59::AID-CNE5>3.0.CO;2-3  0.408
2000 Hartmann MJ, Assad C, Rasnow B, Bower JM. Applications of video mixing and digital overlay to neuroethology. Methods (San Diego, Calif.). 21: 385-91. PMID 10964581 DOI: 10.1006/meth.2000.1025  0.719
2000 Leergaard TB, Lyngstad KA, Thompson JH, Taeymans S, Vos BP, De Schutter E, Bower JM, Bjaalie JG. Rat somatosensory cerebropontocerebellar pathways: spatial relationships of the somatotopic map of the primary somatosensory cortex are preserved in a three-dimensional clustered pontine map. The Journal of Comparative Neurology. 422: 246-66. PMID 10842230 DOI: 10.1002/(Sici)1096-9861(20000626)422:2<246::Aid-Cne7>3.0.Co;2-R  0.617
2000 Hooser SDV, Hofmann UG, Kewley DT, Bower JM. Relationship between field potentials and spike activity in rat S1: Multi-site cortical recordings and analysis Neurocomputing. 32: 591-596. DOI: 10.1016/S0925-2312(00)00216-2  0.519
1999 Vanier MC, Bower JM. A comparative survey of automated parameter-search methods for compartmental neural models. Journal of Computational Neuroscience. 7: 149-71. PMID 10515252 DOI: 10.1023/A:1008972005316  0.612
1999 Shumway CA, Morissette J, Gruen P, Bower JM. Plasticity in cerebellar tactile maps in the adult rat. The Journal of Comparative Neurology. 413: 583-92. PMID 10495444 DOI: 10.1002/(SICI)1096-9861(19991101)413:4<583::AID-CNE7>3.0.CO;2-L  0.698
1999 Hallem JS, Thompson JH, Gundappa-Sulur G, Hawkes R, Bjaalie JG, Bower JM. Spatial correspondence between tactile projection patterns and the distribution of the antigenic Purkinje cell markers anti-zebrin I and anti-zebrin II in the cerebellar folium crus IIA of the rat. Neuroscience. 93: 1083-94. PMID 10473273 DOI: 10.1016/S0306-4522(99)00144-X  0.455
1999 Gundappa-Sulur G, De Schutter E, Bower JM. Ascending granule cell axon: an important component of cerebellar cortical circuitry. The Journal of Comparative Neurology. 408: 580-96. PMID 10340507 DOI: 10.1002/(SICI)1096-9861(19990614)408:4<580::AID-CNE11>3.0.CO;2-O  0.536
1999 Jaeger D, Bower JM. Synaptic Control of Spiking in Cerebellar Purkinje Cells: Dynamic Current Clamp Based on Model Conductances The Journal of Neuroscience. 19: 6090-6101. DOI: 10.1523/JNEUROSCI.19-14-06090.1999  0.491
1998 Assad C, Rasnow B, Stoddard PK, Bower JM. The electric organ discharges of the gymnotiform fishes: II. Eigenmannia. Journal of Comparative Physiology. a, Sensory, Neural, and Behavioral Physiology. 183: 419-32. PMID 9809452 DOI: 10.1007/S003590050268  0.634
1998 Hartmann MJ, Bower JM. Oscillatory activity in the cerebellar hemispheres of unrestrained rats. Journal of Neurophysiology. 80: 1598-604. PMID 9744967 DOI: 10.1152/JN.1998.80.3.1598  0.572
1998 Crook SM, Ermentrout GB, Bower JM. Dendritic and synaptic effects in systems of coupled cortical oscillators. Journal of Computational Neuroscience. 5: 315-29. PMID 9663554 DOI: 10.1023/A:1008839112707  0.538
1998 Baldi P, Vanier MC, Bower JM. On the use of Bayesian methods for evaluating compartmental neural models. Journal of Computational Neuroscience. 5: 285-314. PMID 9663553 DOI: 10.1023/A:1008887028637  0.625
1998 Crook SM, Ermentrout GB, Bower JM. Spike frequency adaptation affects the synchronization properties of networks of cortical oscillations. Neural Computation. 10: 837-54. PMID 9573408 DOI: 10.1162/089976698300017511  0.531
1998 Sultan F, Bower JM. Quantitative Golgi study of the rat cerebellar molecular layer interneurons using principal component analysis. The Journal of Comparative Neurology. 393: 353-73. PMID 9548555 DOI: 10.1002/(SICI)1096-9861(19980413)393:3<353::AID-CNE7>3.0.CO;2-0  0.534
1997 Rasnow B, Assad C, Hartmann MJ, Bower JM. Applications of multimedia computers and video mixing to neuroethology. Journal of Neuroscience Methods. 76: 83-91. PMID 9334943 DOI: 10.1016/S0165-0270(97)00086-1  0.716
1997 Bhalla US, Bower JM. Multiday recordings from olfactory bulb neurons in awake freely moving rats: spatially and temporally organized variability in odorant response properties. Journal of Computational Neuroscience. 4: 221-56. PMID 9257234 DOI: 10.1023/A:1008819818970  0.588
1997 Crook SM, Ermentrout GB, Vanier MC, Bower JM. The role of axonal delay in the synchronization of networks of coupled cortical oscillators. Journal of Computational Neuroscience. 4: 161-72. PMID 9154522 DOI: 10.1023/A:1008843412952  0.708
1997 Jaeger D, De Schutter E, Bower JM. The Role of Synaptic and Voltage-Gated Currents in the Control of Purkinje Cell Spiking: A Modeling Study The Journal of Neuroscience. 17: 91-106. DOI: 10.1523/JNEUROSCI.17-01-00091.1997  0.625
1996 Morissette J, Bower JM. Contribution of somatosensory cortex to responses in the rat cerebellar granule cell layer following peripheral tactile stimulation. Experimental Brain Research. 109: 240-50. PMID 8738373 DOI: 10.1007/BF00231784  0.533
1994 De Schutter E, Bower JM. Simulated responses of cerebellar Purkinje cells are independent of the dendritic location of granule cell synaptic inputs. Proceedings of the National Academy of Sciences of the United States of America. 91: 4736-40. PMID 8197127 DOI: 10.1073/pnas.91.11.4736  0.527
1994 De Schutter E, Bower JM. An active membrane model of the cerebellar Purkinje cell II. Simulation of synaptic responses. Journal of Neurophysiology. 71: 401-19. PMID 8158238 DOI: 10.1152/JN.1994.71.1.401  0.543
1994 Jaeger D, Bower JM. Prolonged responses in rat cerebellar Purkinje cells following activation of the granule cell layer: an intracellular in vitro and in vivo investigation. Experimental Brain Research. 100: 200-14. PMID 7813659 DOI: 10.1007/BF00227191  0.515
1994 De Schutter E, Bower JM. An active membrane model of the cerebellar Purkinje cell. I. Simulation of current clamps in slice. Journal of Neurophysiology. 71: 375-400. PMID 7512629 DOI: 10.1152/JN.1994.71.1.375  0.465
1993 Gonzalez L, Shumway C, Morissette J, Bower JM. Developmental plasticity in cerebellar tactile maps: fractured maps retain a fractured organization. The Journal of Comparative Neurology. 332: 487-98. PMID 8349844 DOI: 10.1002/cne.903320408  0.695
1993 Rasnow B, Assad C, Bower JM. Phase and amplitude maps of the electric organ discharge of the weakly electric fish, Apteronotus leptorhynchus. Journal of Comparative Physiology. a, Sensory, Neural, and Behavioral Physiology. 172: 481-91. PMID 8315610 DOI: 10.1007/BF00213530  0.657
1993 Bhalla US, Bower JM. Exploring parameter space in detailed single neuron models: simulations of the mitral and granule cells of the olfactory bulb. Journal of Neurophysiology. 69: 1948-65. PMID 7688798 DOI: 10.1152/JN.1993.69.6.1948  0.588
1993 Hasselmo ME, Bower JM. Acetylcholine and memory. Trends in Neurosciences. 16: 218-22. PMID 7688162 DOI: 10.1016/0166-2236(93)90159-J  0.474
1992 Hasselmo ME, Anderson BP, Bower JM. Cholinergic modulation of cortical associative memory function. Journal of Neurophysiology. 67: 1230-46. PMID 1597709 DOI: 10.1152/Jn.1992.67.5.1230  0.468
1992 Hasselmo ME, Bower JM. Cholinergic suppression specific to intrinsic not afferent fiber synapses in rat piriform (olfactory) cortex. Journal of Neurophysiology. 67: 1222-9. PMID 1597708 DOI: 10.1152/Jn.1992.67.5.1222  0.489
1992 Wilson M, Bower JM. Cortical oscillations and temporal interactions in a computer simulation of piriform cortex. Journal of Neurophysiology. 67: 981-95. PMID 1316954 DOI: 10.1152/JN.1992.67.4.981  0.49
1992 Bhalla US, Bilitch DH, Bower JM. Rallpacks: a set of benchmarks for neuronal simulators. Trends in Neurosciences. 15: 453-8. PMID 1281353 DOI: 10.1016/0166-2236(92)90009-W  0.564
1991 Wilson MA, Bower JM. A Computer Simulation of Oscillatory Behavior in Primary Visual Cortex. Neural Computation. 3: 498-509. PMID 31167329 DOI: 10.1162/neco.1991.3.4.498  0.435
1991 Hasselmo ME, Bower JM. Selective suppression of afferent but not intrinsic fiber synaptic transmission by 2-amino-4-phosphonobutyric acid (AP4) in piriform cortex. Brain Research. 548: 248-55. PMID 1651141 DOI: 10.1016/0006-8993(91)91128-N  0.49
1990 Hasselmo ME, Bower JM. Afferent and association fiber differences in short-term potentiation in piriform (olfactory) cortex of the rat. Journal of Neurophysiology. 64: 179-90. PMID 2388064 DOI: 10.1152/Jn.1990.64.1.179  0.491
1990 Hasselmo ME, Wilson MA, Anderson BP, Bower JM. Associative memory function in piriform (olfactory) cortex: computational modeling and neuropharmacology. Cold Spring Harbor Symposia On Quantitative Biology. 55: 599-610. PMID 2132840 DOI: 10.1101/Sqb.1990.055.01.057  0.573
1990 Nelson ME, Bower JM. Brain maps and parallel computers. Trends in Neurosciences. 13: 403-8. PMID 1700511 DOI: 10.1016/0166-2236(90)90119-U  0.356
1989 Haberly LB, Bower JM. Olfactory cortex: model circuit for study of associative memory? Trends in Neurosciences. 12: 258-64. PMID 2475938 DOI: 10.1016/0166-2236(89)90025-8  0.638
1989 Paulin MG, Nelson ME, Bower JM. DYNAMICS OF COMPENSATORY EYE MOVEMENT CONTROL: AN OPTIMAL ESTIMATION ANALYSIS OF THE VESTIBULO-OCULAR REFLEX International Journal of Neural Systems. 1: 23-29. DOI: 10.1142/S0129065789000426  0.316
1986 Bower JM, Haberly LB. Facilitating and nonfacilitating synapses on pyramidal cells: a correlation between physiology and morphology. Proceedings of the National Academy of Sciences of the United States of America. 83: 1115-9. PMID 3081890 DOI: 10.1073/PNAS.83.4.1115  0.647
1984 Haberly LB, Bower JM. Analysis of association fiber system in piriform cortex with intracellular recording and staining techniques. Journal of Neurophysiology. 51: 90-112. PMID 6319624 DOI: 10.1152/JN.1984.51.1.90  0.666
1982 Haberly LB, Bower JM. Graphical methods for three-dimensional rotation of complex axonal arborizations. Journal of Neuroscience Methods. 6: 75-84. PMID 6750257 DOI: 10.1016/0165-0270(82)90017-6  0.603
1981 Bower JM, Beermann DH, Gibson JM, Shambes GM, Welker W. Principles of organization of a cerebro-cerebellar circuit. Micromapping the projections from cerebral (SI) to cerebellar (granule cell layer) tactile areas of rats. Brain, Behavior and Evolution. 18: 1-18. PMID 7237101 DOI: 10.1159/000121772  0.551
1981 Haberly LB, Bower JM. A method for rapid filling of fine-tipped micropipettes with electrolyte solutions including those containing horseradish peroxidase. Journal of Neuroscience Methods. 3: 251-4. PMID 7218853 DOI: 10.1016/0165-0270(81)90060-1  0.572
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