Ariel Rokem, Ph.D. - Publications

2015- eScience University of Washington, Seattle, Seattle, WA 
MRI, Vision, Data Science

41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Chandio BQ, Risacher SL, Pestilli F, Bullock D, Yeh FC, Koudoro S, Rokem A, Harezlak J, Garyfallidis E. Bundle analytics, a computational framework for investigating the shapes and profiles of brain pathways across populations. Scientific Reports. 10: 17149. PMID 33051471 DOI: 10.1038/s41598-020-74054-4  1
2019 Bressler DW, Rokem A, Silver MA. Slow Endogenous Fluctuations in Cortical Functional Magnetic Resonance Imaging Signals Correlate with Reduced Performance in a Visual Detection Task and Are Suppressed by Spatial Attention. Journal of Cognitive Neuroscience. 1-15. PMID 31560268 DOI: 10.1162/Jocn_A_01470  1
2019 Beyeler M, Nanduri D, Weiland JD, Rokem A, Boynton GM, Fine I. A model of ganglion axon pathways accounts for percepts elicited by retinal implants. Scientific Reports. 9: 9199. PMID 31235711 DOI: 10.1038/S41598-019-45416-4  0.96
2019 Keshavan A, Yeatman JD, Rokem A. Combining Citizen Science and Deep Learning to Amplify Expertise in Neuroimaging. Frontiers in Neuroinformatics. 13: 29. PMID 31139070 DOI: 10.3389/fninf.2019.00029  1
2019 Bain JS, Yeatman JD, Schurr R, Rokem A, Mezer AA. Evaluating arcuate fasciculus laterality measurements across dataset and tractography pipelines. Human Brain Mapping. PMID 31106944 DOI: 10.1002/hbm.24626  1
2019 Huber E, Henriques RN, Owen JP, Rokem A, Yeatman JD. Applying microstructural models to understand the role of white matter in cognitive development. Developmental Cognitive Neuroscience. 36: 100624. PMID 30927705 DOI: 10.1016/j.dcn.2019.100624  1
2018 Huber E, Donnelly PM, Rokem A, Yeatman JD. Rapid and widespread white matter plasticity during an intensive reading intervention. Nature Communications. 9: 2260. PMID 29884784 DOI: 10.1038/s41467-018-04627-5  1
2018 Yeatman JD, Richie-Halford A, Smith JK, Keshavan A, Rokem A. A browser-based tool for visualization and analysis of diffusion MRI data. Nature Communications. 9: 940. PMID 29507333 DOI: 10.1038/s41467-018-03297-7  1
2017 Ferizi U, Scherrer B, Schneider T, Alipoor M, Eufracio O, Fick RHJ, Deriche R, Nilsson M, Loya-Olivas AK, Rivera M, Poot DHJ, Ramirez-Manzanares A, Marroquin JL, Rokem A, Pötter C, et al. Diffusion MRI microstructure models with in vivo human brain Connectome data: results from a multi-group comparison. Nmr in Biomedicine. PMID 28643354 DOI: 10.1002/Nbm.3734  1
2017 Beyeler M, Rokem A, Boynton G, Fine I. Learning to see again: biological constraints on cortical plasticity and the implications for sight restoration technologies. Journal of Neural Engineering. PMID 28612755 DOI: 10.1088/1741-2552/aa795e  0.96
2017 Rokem A, Takemura H, Bock AS, Scherf KS, Behrmann M, Wandell BA, Fine I, Bridge H, Pestilli F. The visual white matter: The application of diffusion MRI and fiber tractography to vision science. Journal of Vision. 17: 4. PMID 28196374 DOI: 10.1167/17.2.4  1
2016 Gorgolewski KJ, Auer T, Calhoun VD, Craddock RC, Das S, Duff EP, Flandin G, Ghosh SS, Glatard T, Halchenko YO, Handwerker DA, Hanke M, Keator D, Li X, Michael Z, ... ... Rokem A, et al. The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data. 3: 160044. PMID 27326542 DOI: 10.1038/Sdata.2016.44  1
2016 Mezer A, Rokem A, Berman S, Hastie T, Wandell BA. Evaluating quantitative proton-density-mapping methods. Human Brain Mapping. PMID 27273015 DOI: 10.1002/Hbm.23264  1
2016 Cameron Craddock R, S Margulies D, Bellec P, Nolan Nichols B, Alcauter S, A Barrios F, Burnod Y, J Cannistraci C, Cohen-Adad J, De Leener B, Dery S, Downar J, Dunlop K, R Franco A, Seligman Froehlich C, ... ... Rokem A, et al. Brainhack: a collaborative workshop for the open neuroscience community. Gigascience. 5: 16. PMID 27042293 DOI: 10.1186/S13742-016-0121-X  1
2016 Tian Q, Rokem A, Folkerth RD, Nummenmaa A, Fan Q, Edlow BL, McNab JA. Q-space truncation and sampling in diffusion spectrum imaging. Magnetic Resonance in Medicine. PMID 26762670 DOI: 10.1002/mrm.26071  1
2015 Ajina S, Pestilli F, Rokem A, Kennard C, Bridge H. Human blindsight is mediated by an intact geniculo-extrastriate pathway. Elife. 4. PMID 26485034 DOI: 10.7554/Elife.08935  1
2015 Rokem A, Yeatman JD, Pestilli F, Kay KN, Mezer A, van der Walt S, Wandell BA. Correction: Evaluating the Accuracy of Diffusion MRI Models in White Matter. Plos One. 10: e0139150. PMID 26394229 DOI: 10.1371/journal.pone.0139150  1
2015 Rokem A, Yeatman JD, Pestilli F, Kay KN, Mezer A, van der Walt S, Wandell BA. Evaluating the accuracy of diffusion MRI models in white matter. Plos One. 10: e0123272. PMID 25879933 DOI: 10.1371/journal.pone.0123272  1
2015 Takemura H, Rokem A, Winawer J, Yeatman JD, Wandell BA, Pestilli F. A Major Human White Matter Pathway Between Dorsal and Ventral Visual Cortex. Cerebral Cortex (New York, N.Y. : 1991). PMID 25828567 DOI: 10.1093/Cercor/Bhv064  1
2014 Zheng CY, Pestilli F, Rokem A. Deconvolution of High Dimensional Mixtures via Boosting, with Application to Diffusion-Weighted MRI of Human Brain. Advances in Neural Information Processing Systems. 27: 2699-2707. PMID 25684972  1
2014 Yeatman JD, Weiner KS, Pestilli F, Rokem A, Mezer A, Wandell BA. The vertical occipital fasciculus: a century of controversy resolved by in vivo measurements. Proceedings of the National Academy of Sciences of the United States of America. 111: E5214-23. PMID 25404310 DOI: 10.1073/pnas.1418503111  1
2014 Pestilli F, Yeatman JD, Rokem A, Kay KN, Wandell BA. Evaluation and statistical inference for human connectomes. Nature Methods. 11: 1058-63. PMID 25194848 DOI: 10.1038/nmeth.3098  1
2014 Garyfallidis E, Brett M, Amirbekian B, Rokem A, van der Walt S, Descoteaux M, Nimmo-Smith I. Dipy, a library for the analysis of diffusion MRI data. Frontiers in Neuroinformatics. 8: 8. PMID 24600385 DOI: 10.3389/fninf.2014.00008  1
2014 McDevitt EA, Rokem A, Silver MA, Mednick SC. Sex differences in sleep-dependent perceptual learning. Vision Research. 99: 172-9. PMID 24141074 DOI: 10.1016/j.visres.2013.10.009  1
2013 Kay KN, Rokem A, Winawer J, Dougherty RF, Wandell BA. GLMdenoise: a fast, automated technique for denoising task-based fMRI data. Frontiers in Neuroscience. 7: 247. PMID 24381539 DOI: 10.3389/Fnins.2013.00247  1
2013 Yoon JH, Sheremata SL, Rokem A, Silver MA. Windows to the soul: vision science as a tool for studying biological mechanisms of information processing deficits in schizophrenia. Frontiers in Psychology. 4: 681. PMID 24198792 DOI: 10.3389/fpsyg.2013.00681  1
2013 Rokem A, Silver MA. The benefits of cholinergic enhancement during perceptual learning are long-lasting. Frontiers in Computational Neuroscience. 7: 66. PMID 23755006 DOI: 10.3389/fncom.2013.00066  1
2013 Kay KN, Winawer J, Rokem A, Mezer A, Wandell BA. A two-stage cascade model of BOLD responses in human visual cortex. Plos Computational Biology. 9: e1003079. PMID 23737741 DOI: 10.1371/journal.pcbi.1003079  1
2012 Kosovicheva AA, Sheremata SL, Rokem A, Landau AN, Silver MA. Cholinergic enhancement reduces orientation-specific surround suppression but not visual crowding. Frontiers in Behavioral Neuroscience. 6: 61. PMID 23049505 DOI: 10.3389/fnbeh.2012.00061  1
2012 Rokem A, Landau AN, Prinzmetal W, Wallace DL, Silver MA, D'Esposito M. Modulation of inhibition of return by the dopamine D2 receptor agonist bromocriptine depends on individual DAT1 genotype. Cerebral Cortex (New York, N.Y. : 1991). 22: 1133-8. PMID 21799208 DOI: 10.1093/cercor/bhr185  1
2012 Kosovicheva AA, Sheremata SL, Rokem A, Landau AN, Silver MA. Cholinergic enhancement reduces 1 orientation-specific surround suppression but not visual crowding Frontiers in Behavioral Neuroscience 1
2011 Rokem A, Yoon JH, Ooms RE, Maddock RJ, Minzenberg MJ, Silver MA. Broader visual orientation tuning in patients with schizophrenia. Frontiers in Human Neuroscience. 5: 127. PMID 22069385 DOI: 10.3389/fnhum.2011.00127  1
2010 Rokem A, Silver MA. Cholinergic enhancement augments magnitude and specificity of visual perceptual learning in healthy humans. Current Biology : Cb. 20: 1723-8. PMID 20850321 DOI: 10.1016/j.cub.2010.08.027  1
2010 Rokem A, Landau AN, Garg D, Prinzmetal W, Silver MA. Cholinergic enhancement increases the effects of voluntary attention but does not affect involuntary attention. Neuropsychopharmacology : Official Publication of the American College of Neuropsychopharmacology. 35: 2538-44. PMID 20811340 DOI: 10.1038/npp.2010.118  1
2010 Yoon JH, Maddock RJ, Rokem A, Silver MA, Minzenberg MJ, Ragland JD, Carter CS. GABA concentration is reduced in visual cortex in schizophrenia and correlates with orientation-specific surround suppression. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 3777-81. PMID 20220012 DOI: 10.1523/JNEUROSCI.6158-09.2010  1
2009 Eyherabide HG, Rokem A, Herz AV, Samengo I. Bursts generate a non-reducible spike-pattern code. Frontiers in Neuroscience. 3: 8-14. PMID 19753092 DOI: 10.3389/neuro.01.002.2009  1
2009 Yoon JH, Rokem AS, Silver MA, Minzenberg MJ, Ursu S, Ragland JD, Carter CS. Diminished orientation-specific surround suppression of visual processing in schizophrenia. Schizophrenia Bulletin. 35: 1078-84. PMID 19620601 DOI: 10.1093/Schbul/Sbp064  1
2009 Rokem A, Silver MA. A model of encoding and decoding in V1 and MT accounts for motion perception anisotropies in the human visual system. Brain Research. 1299: 3-16. PMID 19595992 DOI: 10.1016/j.brainres.2009.07.005  1
2009 Rokem A, Ahissar M. Interactions of cognitive and auditory abilities in congenitally blind individuals. Neuropsychologia. 47: 843-8. PMID 19138693 DOI: 10.1016/j.neuropsychologia.2008.12.017  1
2008 Eyherabide HG, Rokem A, Herz AV, Samengo I. Burst firing is a neural code in an insect auditory system. Frontiers in Computational Neuroscience. 2: 3. PMID 18946533 DOI: 10.3389/neuro.10.003.2008  1
2006 Rokem A, Watzl S, Gollisch T, Stemmler M, Herz AV, Samengo I. Spike-timing precision underlies the coding efficiency of auditory receptor neurons. Journal of Neurophysiology. 95: 2541-52. PMID 16354733 DOI: 10.1152/jn.00891.2005  1
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