| Year |
Citation |
Score |
| 2022 |
Mahoney BJ, Takayesu A, Zhou A, Cascio D, Clubb RT. The structure of the Clostridium thermocellum RsgI9 ectodomain provides insight into the mechanism of biomass sensing. Proteins. PMID 35194841 DOI: 10.1002/prot.26326 |
0.351 |
|
| 2021 |
Martinez OE, Mahoney BJ, Goring AK, Yi SW, Tran DP, Cascio D, Phillips ML, Muthana MM, Chen X, Jung ME, Loo JA, Clubb RT. Insight into the molecular basis of substrate recognition by the wall teichoic acid glycosyltransferase TagA. The Journal of Biological Chemistry. 101464. PMID 34864059 DOI: 10.1016/j.jbc.2021.101464 |
0.324 |
|
| 2020 |
Ellis-Guardiola K, Mahoney BJ, Clubb RT. NEAr Transporter (NEAT) Domains: Unique Surface Displayed Heme Chaperones That Enable Gram-Positive Bacteria to Capture Heme-Iron From Hemoglobin. Frontiers in Microbiology. 11: 607679. PMID 33488548 DOI: 10.3389/fmicb.2020.607679 |
0.306 |
|
| 2020 |
Gosschalk JE, Chang C, Sue CK, Siegel SD, Wu C, Kattke MD, Yi SW, Damoiseaux R, Jung ME, Ton-That H, Clubb RT. A Cell-based Screen in Actinomyces oris to Identify Sortase Inhibitors. Scientific Reports. 10: 8520. PMID 32444661 DOI: 10.1038/S41598-020-65256-X |
0.307 |
|
| 2020 |
Sue CK, McConnell SA, Ellis-Guardiola K, Muroski JM, McAllister RA, Yu J, Alvarez AI, Chang C, Loo RRO, Loo JA, Ton-That H, Clubb RT. Kinetics and Optimization of the Lysine-Isopeptide Bond Forming Sortase Enzyme from . Bioconjugate Chemistry. PMID 32396336 DOI: 10.1021/Acs.Bioconjchem.0C00163 |
0.795 |
|
| 2020 |
McConnell SA, Cannon KA, Morgan C, McAllister R, Amer BR, Clubb RT, Yeates TO. Designed Protein Cages as Scaffolds for Building Multi-Enzyme Materials. Acs Synthetic Biology. PMID 31922719 DOI: 10.1021/Acssynbio.9B00407 |
0.34 |
|
| 2019 |
Ellis-Guardiola K, Clayton J, Pham C, Mahoney B, Wereszczynski J, Clubb RT. The Staphylococcus aureus IsdH receptor forms a dynamic complex with human hemoglobin that triggers heme release via two distinct hot spots. Journal of Molecular Biology. PMID 31881209 DOI: 10.1016/J.Jmb.2019.12.023 |
0.4 |
|
| 2019 |
Chang C, Wu C, Osipiuk J, Siegel SD, Zhu S, Liu X, Joachimiak A, Clubb RT, Das A, Ton-That H. Cell-to-cell interaction requires optimal positioning of a pilus tip adhesin modulated by gram-positive transpeptidase enzymes. Proceedings of the National Academy of Sciences of the United States of America. PMID 31427528 DOI: 10.1073/Pnas.1907733116 |
0.343 |
|
| 2019 |
Macdonald R, Mahoney BJ, Ellis-Guardiola K, Maresso A, Clubb RT. NMR Experiments Redefine the Hemoglobin Binding Properties of Bacterial NEAr-iron Transporter (NEAT) Domains. Protein Science : a Publication of the Protein Society. PMID 31120610 DOI: 10.1002/Pro.3662 |
0.432 |
|
| 2019 |
Tsui HS, Pham NVB, Amer BR, Bradley MC, Gosschalk JE, Gallagher-Jones M, Ibarra H, Clubb RT, Blaby-Haas CE, Clarke CF. Human COQ10A and COQ10B are distinct lipid-binding START domain proteins required for coenzyme Q function. Journal of Lipid Research. PMID 31048406 DOI: 10.1194/Jlr.M093534 |
0.353 |
|
| 2019 |
Kattke MD, Gosschalk JE, Martinez OE, Kumar G, Gale RT, Cascio D, Sawaya MR, Philips M, Brown ED, Clubb RT. Structure and mechanism of TagA, a novel membrane-associated glycosyltransferase that produces wall teichoic acids in pathogenic bacteria. Plos Pathogens. 15: e1007723. PMID 31002736 DOI: 10.1371/Journal.Ppat.1007723 |
0.372 |
|
| 2019 |
Siegel SD, Amer BR, Wu C, Sawaya MR, Gosschalk JE, Clubb RT, Ton-That H. Structure and Mechanism of LcpA, a Phosphotransferase That Mediates Glycosylation of a Gram-Positive Bacterial Cell Wall-Anchored Protein. Mbio. 10. PMID 30782654 DOI: 10.1128/Mbio.01580-18 |
0.423 |
|
| 2018 |
Macdonald R, Cascio D, Collazo MJ, Phillips ML, Clubb RT. The Shr Protein Captures Human Hemoglobin Using Two Structurally Unique Binding Domains. The Journal of Biological Chemistry. PMID 30301765 DOI: 10.1074/Jbc.Ra118.005261 |
0.504 |
|
| 2018 |
McConnell SA, Amer BR, Muroski J, Fu J, Chang C, Loo RRO, Loo J, Osipiuk J, Ton-That H, Clubb RT. Protein Labeling via a Specific Lysine-Isopeptide Bond using the Pilin Polymerizing Sortase from Corynebacterium diphtheriae. Journal of the American Chemical Society. PMID 29927249 DOI: 10.1021/Jacs.8B05200 |
0.356 |
|
| 2018 |
Chang C, Amer BR, Osipiuk J, McConnell SA, Huang IH, Hsieh V, Fu J, Nguyen HH, Muroski J, Flores E, Ogorzalek Loo RR, Loo JA, Putkey JA, Joachimiak A, Das A, ... Clubb RT, et al. In vitro reconstitution of sortase-catalyzed pilus polymerization reveals structural elements involved in pilin cross-linking. Proceedings of the National Academy of Sciences of the United States of America. PMID 29844180 DOI: 10.1073/Pnas.1800954115 |
0.438 |
|
| 2018 |
Huang GL, Gosschalk JE, Kim YS, Ogorzalek Loo RR, Clubb RT. Stabilizing displayed proteins on vegetative Bacillus subtilis cells. Applied Microbiology and Biotechnology. PMID 29796970 DOI: 10.1007/S00253-018-9062-X |
0.38 |
|
| 2018 |
Sjodt M, Macdonald R, Marshall JD, Clayton J, Olson JS, Phillips ML, Gell DA, Wereszczynski J, Clubb RT. Energetics Underlying Hemin Extraction from Human Hemoglobin by. The Journal of Biological Chemistry. PMID 29540481 DOI: 10.1074/Jbc.Ra117.000803 |
0.42 |
|
| 2018 |
Anderson TD, Robson SA, Jiang XW, Malmirchegini GR, Fierobe HP, Lazazzera BA, Clubb RT. Retraction for Anderson et al., "Assembly of Minicellulosomes on the Surface of Bacillus subtilis". Applied and Environmental Microbiology. 84. PMID 29386191 DOI: 10.1128/Aem.02429-17 |
0.749 |
|
| 2018 |
Macdonald R, Cascio D, Collazo M, Phillips M, Clubb R. Shr Hemoglobin Interacting Domain 2 Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr27550 |
0.32 |
|
| 2017 |
Jacobitz AW, Kattke MD, Wereszczynski J, Clubb RT. Sortase Transpeptidases: Structural Biology and Catalytic Mechanism. Advances in Protein Chemistry and Structural Biology. 109: 223-264. PMID 28683919 DOI: 10.1016/Bs.Apcsb.2017.04.008 |
0.409 |
|
| 2017 |
Chan AH, Yi SW, Weiner EM, Amer BR, Sue CK, Wereszczynski J, Dillen CA, Senese S, Torres JZ, Andrew McCammon J, Miller LS, Jung ME, Clubb RT. NMR Structure-Based Optimization of Staphylococcus aureus Sortase A Pyridazinone Inhibitors. Chemical Biology & Drug Design. PMID 28160417 DOI: 10.1111/Cbdd.12962 |
0.75 |
|
| 2017 |
Amer BR, Sawaya MR, Liauw B, Fu J, Ton-That H, Clubb RT. Molecular Level Insight into a Unique Surface Protein Glycosylation Pathway: Structure of the Actinomyces Oris LCP Enzyme that Mediates Surface Protein Glycosylation Biophysical Journal. 112: 344a. DOI: 10.1016/J.Bpj.2016.11.1866 |
0.434 |
|
| 2016 |
Kattke MD, Chan AH, Duong A, Sexton DL, Sawaya MR, Cascio D, Elliot MA, Clubb RT. Crystal Structure of the Streptomyces coelicolor Sortase E1 Transpeptidase Provides Insight into the Binding Mode of the Novel Class E Sorting Signal. Plos One. 11: e0167763. PMID 27936128 DOI: 10.1371/Journal.Pone.0167763 |
0.382 |
|
| 2016 |
Jacobitz AW, Naziga EB, Yi SW, McConnell SA, Peterson RD, Jung ME, Clubb RT, Wereszczynski J. The "Lid" in the Streptococcus pneumoniae SrtC1 Sortase Adopts a Rigid Structure That Regulates Substrate Access to the Active Site. The Journal of Physical Chemistry. B. PMID 27109553 DOI: 10.1021/Acs.Jpcb.6B01930 |
0.425 |
|
| 2016 |
Amer BR, Macdonald R, Jacobitz AW, Liauw B, Clubb RT. Rapid addition of unlabeled silent solubility tags to proteins using a new substrate-fused sortase reagent. Journal of Biomolecular Nmr. PMID 26852413 DOI: 10.1007/S10858-016-0019-Z |
0.384 |
|
| 2015 |
Tekeste SS, Wilkinson TA, Weiner EM, Xu X, Miller JT, Le Grice SF, Clubb RT, Chow SA. Interaction Between Reverse Transcriptase and Integrase is Required for Reverse Transcription During HIV-1 Replication. Journal of Virology. PMID 26401032 DOI: 10.1128/Jvi.01471-15 |
0.77 |
|
| 2015 |
Chan AH, Yi SW, Terwilliger AL, Maresso AW, Jung ME, Clubb RT. Structure of the Bacillus anthracis Sortase A Enzyme Bound to Its Sorting Signal: A FLEXIBLE AMINO-TERMINAL APPENDAGE MODULATES SUBSTRATE ACCESS. The Journal of Biological Chemistry. 290: 25461-74. PMID 26324714 DOI: 10.1074/Jbc.M115.670984 |
0.46 |
|
| 2015 |
Macdonald R, Sarkar D, Amer BR, Clubb RT. Solution structure of the PhoP DNA-binding domain from Mycobacterium tuberculosis. Journal of Biomolecular Nmr. PMID 26209027 DOI: 10.1007/S10858-015-9965-0 |
0.48 |
|
| 2015 |
Dickson CF, Jacques DA, Clubb RT, Guss JM, Gell DA. The structure of haemoglobin bound to the haemoglobin receptor IsdH from Staphylococcus aureus shows disruption of the native α-globin haem pocket. Acta Crystallographica. Section D, Biological Crystallography. 71: 1295-306. PMID 26057669 DOI: 10.1107/S1399004715005817 |
0.385 |
|
| 2015 |
Sjodt M, Macdonald R, Spirig T, Chan AH, Dickson CF, Fabian M, Olson JS, Gell DA, Clubb RT. The PRE-Derived NMR Model of the 38.8-kDa Tri-Domain IsdH Protein from Staphylococcus aureus Suggests That It Adaptively Recognizes Human Hemoglobin. Journal of Molecular Biology. PMID 25687963 DOI: 10.1016/J.Jmb.2015.02.008 |
0.46 |
|
| 2015 |
Chan A, Yi SW, Jung M, Clubb R. Solution Structure of the Bacillus anthracis Sortase A-substrate Complex Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Rui/Pdb |
0.315 |
|
| 2014 |
Malmirchegini GR, Sjodt M, Shnitkind S, Sawaya MR, Rosinski J, Newton SM, Klebba PE, Clubb RT. Novel mechanism of hemin capture by Hbp2, the hemoglobin-binding hemophore from Listeria monocytogenes. The Journal of Biological Chemistry. 289: 34886-99. PMID 25315777 DOI: 10.1074/Jbc.M114.583013 |
0.836 |
|
| 2014 |
Amer BR, Clubb RT. A sweet new role for LCP enzymes in protein glycosylation. Molecular Microbiology. 94: 1197-200. PMID 25302626 DOI: 10.1111/Mmi.12825 |
0.384 |
|
| 2014 |
Jacobitz AW, Wereszczynski J, Yi SW, Amer BR, Huang GL, Nguyen AV, Sawaya MR, Jung ME, McCammon JA, Clubb RT. Structural and computational studies of the Staphylococcus aureus sortase B-substrate complex reveal a substrate-stabilized oxyanion hole. The Journal of Biological Chemistry. 289: 8891-902. PMID 24519933 DOI: 10.1074/Jbc.M113.509273 |
0.439 |
|
| 2014 |
Huang GL, Anderson TD, Clubb RT. Engineering microbial surfaces to degrade lignocellulosic biomass. Bioengineered. 5: 96-106. PMID 24430239 DOI: 10.4161/Bioe.27461 |
0.301 |
|
| 2014 |
Dickson CF, Kumar KK, Jacques DA, Malmirchegini GR, Spirig T, Mackay JP, Clubb RT, Guss JM, Gell DA. Structure of the hemoglobin-IsdH complex reveals the molecular basis of iron capture by Staphylococcus aureus. The Journal of Biological Chemistry. 289: 6728-38. PMID 24425866 DOI: 10.1074/Jbc.M113.545566 |
0.824 |
|
| 2014 |
Jacobitz AW, Wereszczynski J, Yi SW, Amer BR, Huang GL, Nguyen AV, Sawaya MR, Jung ME, McCammon JA, Clubb RT. Structural and Computational Studies of the Staphylococcus Aureus Sortase B-Substrate Complex Provide New Insight into the Mechanism of Sortase Transpeptidases Biophysical Journal. 106: 677a. DOI: 10.1016/J.Bpj.2013.11.3749 |
0.427 |
|
| 2013 |
Ran Y, Malmirchegini GR, Clubb RT, Lei B. Axial ligand replacement mechanism in heme transfer from streptococcal heme-binding protein Shp to HtsA of the HtsABC transporter. Biochemistry. 52: 6537-47. PMID 23980583 DOI: 10.1021/Bi400965U |
0.809 |
|
| 2013 |
Chan AH, Wereszczynski J, Amer BR, Yi SW, Jung ME, McCammon JA, Clubb RT. Discovery of Staphylococcus aureus sortase A inhibitors using virtual screening and the relaxed complex scheme. Chemical Biology & Drug Design. 82: 418-28. PMID 23701677 DOI: 10.1111/Cbdd.12167 |
0.33 |
|
| 2013 |
Anderson TD, Miller JI, Fierobe HP, Clubb RT. Recombinant Bacillus subtilis that grows on untreated plant biomass. Applied and Environmental Microbiology. 79: 867-76. PMID 23183968 DOI: 10.1128/Aem.02433-12 |
0.306 |
|
| 2013 |
Spirig T, Malmirchegini GR, Zhang J, Robson SA, Sjodt M, Liu M, Krishna Kumar K, Dickson CF, Gell DA, Lei B, Loo JA, Clubb RT. Staphylococcus aureus uses a novel multidomain receptor to break apart human hemoglobin and steal its heme. The Journal of Biological Chemistry. 288: 1065-78. PMID 23132864 DOI: 10.1074/Jbc.M112.419119 |
0.795 |
|
| 2012 |
Kappel K, Wereszczynski J, Clubb RT, McCammon JA. The binding mechanism, multiple binding modes, and allosteric regulation of Staphylococcus aureus Sortase A probed by molecular dynamics simulations. Protein Science : a Publication of the Protein Society. 21: 1858-71. PMID 23023444 DOI: 10.1002/Pro.2168 |
0.48 |
|
| 2012 |
Robson SA, Jacobitz AW, Phillips ML, Clubb RT. Solution structure of the sortase required for efficient production of infectious Bacillus anthracis spores. Biochemistry. 51: 7953-63. PMID 22974341 DOI: 10.1021/Bi300867T |
0.507 |
|
| 2012 |
Sam MD, Clubb RT. Preparation and optimization of protein-DNA complexes suitable for detailed NMR studies. Methods in Molecular Biology (Clifton, N.J.). 831: 219-32. PMID 22167677 DOI: 10.1007/978-1-61779-480-3_13 |
0.798 |
|
| 2012 |
Spirig T, Clubb RT. Backbone 1H, 13C and 15N resonance assignments of the 39 kDa staphylococcal hemoglobin receptor IsdH. Biomolecular Nmr Assignments. 6: 169-72. PMID 22101872 DOI: 10.1007/S12104-011-9348-8 |
0.439 |
|
| 2012 |
Spirig T, Clubb R, Malmirchegini G, Robson S. Solution structure of Staphylococcus aureus IsdH linker domain Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Lhr/Pdb |
0.35 |
|
| 2011 |
Spirig T, Weiner EM, Clubb RT. Sortase enzymes in Gram-positive bacteria. Molecular Microbiology. 82: 1044-59. PMID 22026821 DOI: 10.1111/J.1365-2958.2011.07887.X |
0.77 |
|
| 2011 |
Krishna Kumar K, Jacques DA, Pishchany G, Caradoc-Davies T, Spirig T, Malmirchegini GR, Langley DB, Dickson CF, Mackay JP, Clubb RT, Skaar EP, Guss JM, Gell DA. Structural basis for hemoglobin capture by Staphylococcus aureus cell-surface protein, IsdH. The Journal of Biological Chemistry. 286: 38439-47. PMID 21917915 DOI: 10.1074/Jbc.M111.287300 |
0.814 |
|
| 2011 |
Villareal VA, Spirig T, Robson SA, Liu M, Lei B, Clubb RT. Transient weak protein-protein complexes transfer heme across the cell wall of Staphylococcus aureus. Journal of the American Chemical Society. 133: 14176-9. PMID 21834592 DOI: 10.1021/Ja203805B |
0.78 |
|
| 2011 |
Anderson TD, Robson SA, Jiang XW, Malmirchegini GR, Fierobe HP, Lazazzera BA, Clubb RT. Assembly of minicellulosomes on the surface of Bacillus subtilis. Applied and Environmental Microbiology. 77: 4849-58. PMID 21622797 DOI: 10.1128/Aem.02599-10 |
0.794 |
|
| 2011 |
Januszyk K, Fleissner MR, Atchabahian L, Shieh FK, Altenbach C, Martin SL, Guo F, Hubbell WL, Clubb RT. Site-directed spin labeling electron paramagnetic resonance study of the ORF1 protein from a mouse L1 retrotransposon. Protein Science : a Publication of the Protein Society. 20: 1231-43. PMID 21563223 DOI: 10.1002/Pro.651 |
0.817 |
|
| 2010 |
Ramey JD, Villareal VA, Ng C, Ward SC, Xiong JP, Clubb RT, Bradley KA. Anthrax toxin receptor 1/tumor endothelial marker 8: mutation of conserved inserted domain residues overrides cytosolic control of protective antigen binding. Biochemistry. 49: 7403-10. PMID 20690680 DOI: 10.1021/Bi100887W |
0.792 |
|
| 2010 |
Robson SA, Peterson R, Bouchard LS, Villareal VA, Clubb RT. A heteronuclear zero quantum coherence Nz-exchange experiment that resolves resonance overlap and its application to measure the rates of heme binding to the IsdC protein. Journal of the American Chemical Society. 132: 9522-3. PMID 20578738 DOI: 10.1021/Ja1017865 |
0.77 |
|
| 2010 |
Senturia R, Faller M, Yin S, Loo JA, Cascio D, Sawaya MR, Hwang D, Clubb RT, Guo F. Structure of the dimerization domain of DiGeorge critical region 8. Protein Science : a Publication of the Protein Society. 19: 1354-65. PMID 20506313 DOI: 10.1002/Pro.414 |
0.408 |
|
| 2010 |
Weiner EM, Robson S, Marohn M, Clubb RT. The Sortase A enzyme that attaches proteins to the cell wall of Bacillus anthracis contains an unusual active site architecture. The Journal of Biological Chemistry. 285: 23433-43. PMID 20489200 DOI: 10.1074/Jbc.M110.135434 |
0.786 |
|
| 2010 |
Weiner E, Robson S, Marohn M, Clubb R. Solution Structure of Bacillus anthracis Sortase A (SrtA) Transpeptidase Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Kw8/Pdb |
0.722 |
|
| 2009 |
Suree N, Yi SW, Thieu W, Marohn M, Damoiseaux R, Chan A, Jung ME, Clubb RT. Discovery and structure-activity relationship analysis of Staphylococcus aureus sortase A inhibitors. Bioorganic & Medicinal Chemistry. 17: 7174-85. PMID 19781950 DOI: 10.1016/J.Bmc.2009.08.067 |
0.739 |
|
| 2009 |
Suree N, Liew CK, Villareal VA, Thieu W, Fadeev EA, Clemens JJ, Jung ME, Clubb RT. The structure of the Staphylococcus aureus sortase-substrate complex reveals how the universally conserved LPXTG sorting signal is recognized. The Journal of Biological Chemistry. 284: 24465-77. PMID 19592495 DOI: 10.1074/Jbc.M109.022624 |
0.816 |
|
| 2009 |
Fadeev EA, Sam MD, Clubb RT. NMR structure of the amino-terminal domain of the lambda integrase protein in complex with DNA: immobilization of a flexible tail facilitates beta-sheet recognition of the major groove. Journal of Molecular Biology. 388: 682-90. PMID 19324050 DOI: 10.1016/J.Jmb.2009.03.041 |
0.849 |
|
| 2009 |
Wilkinson TA, Januszyk K, Phillips ML, Tekeste SS, Zhang M, Miller JT, Le Grice SF, Clubb RT, Chow SA. Identifying and characterizing a functional HIV-1 reverse transcriptase-binding site on integrase. The Journal of Biological Chemistry. 284: 7931-9. PMID 19150986 DOI: 10.1074/Jbc.M806241200 |
0.798 |
|
| 2009 |
Pilpa RM, Robson SA, Villareal VA, Wong ML, Phillips M, Clubb RT. Functionally distinct NEAT (NEAr Transporter) domains within the Staphylococcus aureus IsdH/HarA protein extract heme from methemoglobin. The Journal of Biological Chemistry. 284: 1166-76. PMID 18984582 DOI: 10.1074/Jbc.M806007200 |
0.831 |
|
| 2009 |
Suree N, Liew C, Villareal V, Thieu W, Fadeev E, Clemens J, Jung M, Clubb R. Solution Structure of the S. Aureus Sortase A-substrate Complex Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Kid/Pdb |
0.774 |
|
| 2008 |
Villareal VA, Pilpa RM, Robson SA, Fadeev EA, Clubb RT. The IsdC protein from Staphylococcus aureus uses a flexible binding pocket to capture heme. The Journal of Biological Chemistry. 283: 31591-600. PMID 18715872 DOI: 10.1074/Jbc.M801126200 |
0.831 |
|
| 2007 |
Suree N, Jung ME, Clubb RT. Recent advances towards new anti-infective agents that inhibit cell surface protein anchoring in Staphylococcus aureus and other gram-positive pathogens. Mini Reviews in Medicinal Chemistry. 7: 991-1000. PMID 17979801 DOI: 10.2174/138955707782110097 |
0.752 |
|
| 2007 |
Januszyk K, Li PW, Villareal V, Branciforte D, Wu H, Xie Y, Feigon J, Loo JA, Martin SL, Clubb RT. Identification and solution structure of a highly conserved C-terminal domain within ORF1p required for retrotransposition of long interspersed nuclear element-1. The Journal of Biological Chemistry. 282: 24893-904. PMID 17569664 DOI: 10.1074/Jbc.M702023200 |
0.816 |
|
| 2007 |
Abbani MA, Papagiannis CV, Sam MD, Cascio D, Johnson RC, Clubb RT. Structure of the cooperative Xis-DNA complex reveals a micronucleoprotein filament that regulates phage lambda intasome assembly. Proceedings of the National Academy of Sciences of the United States of America. 104: 2109-14. PMID 17287355 DOI: 10.1073/Pnas.0607820104 |
0.823 |
|
| 2007 |
Papagiannis CV, Sam MD, Abbani MA, Yoo D, Cascio D, Clubb RT, Johnson RC. Fis targets assembly of the Xis nucleoprotein filament to promote excisive recombination by phage lambda. Journal of Molecular Biology. 367: 328-43. PMID 17275024 DOI: 10.1016/J.Jmb.2006.12.071 |
0.825 |
|
| 2006 |
Sam MD, Abbani MA, Cascio D, Johnson RC, Clubb RT. Crystallization, dehydration and preliminary X-ray analysis of excisionase (Xis) proteins cooperatively bound to DNA. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 62: 825-8. PMID 16880568 DOI: 10.1107/S1744309106027643 |
0.789 |
|
| 2006 |
Pilpa RM, Fadeev EA, Villareal VA, Wong ML, Phillips M, Clubb RT. Solution structure of the NEAT (NEAr Transporter) domain from IsdH/HarA: the human hemoglobin receptor in Staphylococcus aureus. Journal of Molecular Biology. 360: 435-47. PMID 16762363 DOI: 10.1016/J.Jmb.2006.05.019 |
0.827 |
|
| 2006 |
Naik MT, Suree N, Ilangovan U, Liew CK, Thieu W, Campbell DO, Clemens JJ, Jung ME, Clubb RT. Staphylococcus aureus Sortase A transpeptidase. Calcium promotes sorting signal binding by altering the mobility and structure of an active site loop. The Journal of Biological Chemistry. 281: 1817-26. PMID 16269411 DOI: 10.1074/Jbc.M506123200 |
0.77 |
|
| 2005 |
Pilpa RM, Clubb RT. NMR resonance assignments of the NEAT (NEAr Transporter) domain from the Staphylococcus aureus IsdH protein. Journal of Biomolecular Nmr. 33: 137. PMID 16258836 DOI: 10.1007/S10858-005-2898-2 |
0.797 |
|
| 2005 |
Jung ME, Clemens JJ, Suree N, Liew CK, Pilpa R, Campbell DO, Clubb RT. Synthesis of (2R,3S) 3-amino-4-mercapto-2-butanol, a threonine analogue for covalent inhibition of sortases. Bioorganic & Medicinal Chemistry Letters. 15: 5076-9. PMID 16169722 DOI: 10.1016/J.Bmcl.2005.07.073 |
0.766 |
|
| 2005 |
Iwahara J, Peterson RD, Clubb RT. Compensating increases in protein backbone flexibility occur when the Dead ringer AT-rich interaction domain (ARID) binds DNA: a nitrogen-15 relaxation study. Protein Science : a Publication of the Protein Society. 14: 1140-50. PMID 15802641 DOI: 10.1110/Ps.041154405 |
0.503 |
|
| 2005 |
Abbani M, Iwahara M, Clubb RT. The structure of the excisionase (Xis) protein from conjugative transposon Tn916 provides insights into the regulation of heterobivalent tyrosine recombinases. Journal of Molecular Biology. 347: 11-25. PMID 15733914 DOI: 10.1016/J.Jmb.2005.01.019 |
0.825 |
|
| 2004 |
Liew CK, Smith BT, Pilpa R, Suree N, Ilangovan U, Connolly KM, Jung ME, Clubb RT. Localization and mutagenesis of the sorting signal binding site on sortase A from Staphylococcus aureus. Febs Letters. 571: 221-6. PMID 15280046 DOI: 10.1016/J.Febslet.2004.06.070 |
0.813 |
|
| 2004 |
Comfort D, Clubb RT. A comparative genome analysis identifies distinct sorting pathways in gram-positive bacteria. Infection and Immunity. 72: 2710-22. PMID 15102780 DOI: 10.1128/Iai.72.5.2710-2722.2004 |
0.396 |
|
| 2004 |
Sam MD, Cascio D, Johnson RC, Clubb RT. Crystal structure of the excisionase-DNA complex from bacteriophage lambda. Journal of Molecular Biology. 338: 229-40. PMID 15066428 DOI: 10.1016/J.Jmb.2004.02.053 |
0.839 |
|
| 2003 |
Sam MD, Cascio D, Johnson R, Clubb RT. Crystallization and preliminary X-ray crystallographic analysis of the excisionase-DNA complex from bacteriophage lambda. Acta Crystallographica. Section D, Biological Crystallography. 59: 1238-40. PMID 12832771 DOI: 10.1107/S0907444903008606 |
0.822 |
|
| 2003 |
Warren D, Sam MD, Manley K, Sarkar D, Lee SY, Abbani M, Wojciak JM, Clubb RT, Landy A. Identification of the lambda integrase surface that interacts with Xis reveals a residue that is also critical for Int dimer formation. Proceedings of the National Academy of Sciences of the United States of America. 100: 8176-81. PMID 12832614 DOI: 10.1073/Pnas.1033041100 |
0.817 |
|
| 2003 |
Connolly KM, Smith BT, Pilpa R, Ilangovan U, Jung ME, Clubb RT. Sortase from Staphylococcus aureus does not contain a thiolate-imidazolium ion pair in its active site. The Journal of Biological Chemistry. 278: 34061-5. PMID 12824164 DOI: 10.1074/Jbc.M305245200 |
0.803 |
|
| 2003 |
Milev S, Gorfe AA, Karshikoff A, Clubb RT, Bosshard HR, Jelesarov I. Energetics of sequence-specific protein-DNA association: conformational stability of the DNA binding domain of integrase Tn916 and its cognate DNA duplex. Biochemistry. 42: 3492-502. PMID 12653553 DOI: 10.1021/Bi026936X |
0.463 |
|
| 2003 |
Milev S, Gorfe AA, Karshikoff A, Clubb RT, Bosshard HR, Jelesarov I. Energetics of sequence-specific protein-DNA association: binding of integrase Tn916 to its target DNA. Biochemistry. 42: 3481-91. PMID 12653552 DOI: 10.1021/Bi0269355 |
0.474 |
|
| 2002 |
Sam MD, Papagiannis CV, Connolly KM, Corselli L, Iwahara J, Lee J, Phillips M, Wojciak JM, Johnson RC, Clubb RT. Regulation of directionality in bacteriophage lambda site-specific recombination: structure of the Xis protein. Journal of Molecular Biology. 324: 791-805. PMID 12460578 DOI: 10.1016/S0022-2836(02)01150-6 |
0.842 |
|
| 2002 |
Connolly KM, Iwahara M, Clubb RT. Xis protein binding to the left arm stimulates excision of conjugative transposon Tn916. Journal of Bacteriology. 184: 2088-99. PMID 11914339 DOI: 10.1128/Jb.184.8.2088-2099.2002 |
0.695 |
|
| 2002 |
Wojciak JM, Sarkar D, Landy A, Clubb RT. Arm-site binding by lambda -integrase: solution structure and functional characterization of its amino-terminal domain. Proceedings of the National Academy of Sciences of the United States of America. 99: 3434-9. PMID 11904406 DOI: 10.1073/Pnas.052017999 |
0.813 |
|
| 2002 |
Iwahara J, Iwahara M, Daughdrill GW, Ford J, Clubb RT. The structure of the Dead ringer-DNA complex reveals how AT-rich interaction domains (ARIDs) recognize DNA. The Embo Journal. 21: 1197-209. PMID 11867548 DOI: 10.1093/Emboj/21.5.1197 |
0.51 |
|
| 2001 |
Iwahara J, Wojciak JM, Clubb RT. An efficient NMR experiment for analyzing sugar-puckering in unlabeled DNA: application to the 26-kDa dead ringer-DNA complex. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 153: 262-6. PMID 11740904 DOI: 10.1006/Jmre.2001.2448 |
0.742 |
|
| 2001 |
Wojciak JM, Clubb RT. Finding the function buried in SAND. Nature Structural Biology. 8: 568-70. PMID 11427878 DOI: 10.1038/89582 |
0.781 |
|
| 2001 |
Ilangovan U, Ton-That H, Iwahara J, Schneewind O, Clubb RT. Structure of sortase, the transpeptidase that anchors proteins to the cell wall of Staphylococcus aureus. Proceedings of the National Academy of Sciences of the United States of America. 98: 6056-61. PMID 11371637 DOI: 10.1073/Pnas.101064198 |
0.469 |
|
| 2001 |
Iwahara J, Wojciak JM, Clubb RT. Improved NMR spectra of a protein-DNA complex through rational mutagenesis and the application of a sensitivity optimized isotope-filtered NOESY experiment. Journal of Biomolecular Nmr. 19: 231-41. PMID 11330810 DOI: 10.1023/A:1011296112710 |
0.775 |
|
| 2001 |
Wojciak JM, Iwahara J, Clubb RT. The Mu repressor-DNA complex contains an immobilized 'wing' within the minor groove. Nature Structural Biology. 8: 84-90. PMID 11135677 DOI: 10.1038/83103 |
0.794 |
|
| 2000 |
Connolly KM, Ilangovan U, Wojciak JM, Iwahara M, Clubb RT. Major groove recognition by three-stranded beta-sheets: affinity determinants and conserved structural features. Journal of Molecular Biology. 300: 841-56. PMID 10891272 DOI: 10.1006/Jmbi.2000.3888 |
0.842 |
|
| 2000 |
Wojciak J, Connolly K, Clubb R. 1H, 13C, and 15N Chemical Shift Assignments for Tn916 N-terminal DNA Binding Domain complex with DNA Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr4165 |
0.815 |
|
| 1999 |
Iwahara J, Clubb RT. Letter to the Editor: 1H, 13C and 15N resonance assignments of the AT-rich interaction domain from the Dead Ringer protein. Journal of Biomolecular Nmr. 15: 85-6. PMID 20703964 DOI: 10.1023/A:1008395719491 |
0.358 |
|
| 1999 |
Iwahara J, Clubb RT. Solution structure of the DNA binding domain from Dead ringer, a sequence-specific AT-rich interaction domain (ARID). The Embo Journal. 18: 6084-94. PMID 10545119 DOI: 10.1093/Emboj/18.21.6084 |
0.533 |
|
| 1999 |
Ilangovan U, Wojciak JM, Connolly KM, Clubb RT. NMR structure and functional studies of the Mu repressor DNA-binding domain. Biochemistry. 38: 8367-76. PMID 10387082 DOI: 10.1021/Bi990530B |
0.849 |
|
| 1999 |
Connolly KM, Wojciak JM, Clubb RT. Resonance assignments of the Tn916 integrase DNA-binding domain and the integrase:DNA complex. Journal of Biomolecular Nmr. 14: 95-6. PMID 10382314 DOI: 10.1023/A:1008328323180 |
0.821 |
|
| 1999 |
Wojciak JM, Connolly KM, Clubb RT. NMR structure of the Tn916 integrase-DNA complex. Nature Structural Biology. 6: 366-73. PMID 10201406 DOI: 10.1038/7603 |
0.847 |
|
| 1998 |
Connolly KM, Wojciak JM, Clubb RT. Site-specific DNA binding using a variation of the double stranded RNA binding motif. Nature Structural Biology. 5: 546-50. PMID 9665166 DOI: 10.1038/799 |
0.847 |
|
| 1997 |
Schumacher S, Clubb RT, Cai M, Mizuuchi K, Clore GM, Gronenborn AM. Solution structure of the Mu end DNA-binding ibeta subdomain of phage Mu transposase: modular DNA recognition by two tethered domains. The Embo Journal. 16: 7532-41. PMID 9405381 DOI: 10.1093/Emboj/16.24.7532 |
0.548 |
|
| 1997 |
Clubb RT, Schumacher S, Mizuuchi K, Gronenborn AM, Clore GM. Solution structure of the I gamma subdomain of the Mu end DNA-binding domain of phage Mu transposase. Journal of Molecular Biology. 273: 19-25. PMID 9367742 DOI: 10.1006/Jmbi.1997.1312 |
0.519 |
|
| 1996 |
Clubb RT, Mizuuchi M, Huth JR, Omichinski JG, Savilahti H, Mizuuchi K, Clore GM, Gronenborn AM. The wing of the enhancer-binding domain of Mu phage transposase is flexible and is essential for efficient transposition. Proceedings of the National Academy of Sciences of the United States of America. 93: 1146-50. PMID 8577730 DOI: 10.1073/Pnas.93.3.1146 |
0.543 |
|
| 1995 |
Clore GM, Ernst J, Clubb R, Omichinski JG, Poindexter Kennedy WM, Sakaguchi K, Appella E, Gronenborn AM. Refined solution structure of the oligomerization domain of the tumour suppressor p53 Nature Structural Biology. 2: 321-333. PMID 7796267 DOI: 10.1038/Nsb0495-321 |
0.373 |
|
| 1995 |
Clubb RT, Omichinski JG, Sakaguchi K, Appella E, Gronenborn AM, Clore GM. Backbone dynamics of the oligomerization domain of p53 determined from 15N NMR relaxation measurements. Protein Science : a Publication of the Protein Society. 4: 855-62. PMID 7663341 DOI: 10.1002/Pro.5560040505 |
0.324 |
|
| 1994 |
Clubb RT, Omichinski JG, Clore GM, Gronenborn AM. Mapping the binding surface of interleukin-8 complexed with an N-terminal fragment of the type 1 human interleukin-8 receptor. Febs Letters. 338: 93-7. PMID 8307164 DOI: 10.1016/0014-5793(94)80123-1 |
0.31 |
|
| 1994 |
Fejzo J, Etzkorn FA, Clubb RT, Shi Y, Walsh CT, Wagner G. The mutant Escherichia coli F112W cyclophilin binds cyclosporin A in nearly identical conformation as human cyclophilin. Biochemistry. 33: 5711-20. PMID 8180197 DOI: 10.1021/Bi00185A007 |
0.563 |
|
| 1994 |
Clubb RT, Ferguson SB, Walsh CT, Wagner G. Three-dimensional solution structure of Escherichia coli periplasmic cyclophilin. Biochemistry. 33: 2761-72. PMID 8130188 DOI: 10.1021/Bi00176A004 |
0.536 |
|
| 1994 |
Clubb RT, Omichinski JG, Savilahti H, Mizuuchi K, Gronenborn AM, Clore GM. A novel class of winged helix-turn-helix protein: the DNA-binding domain of Mu transposase. Structure (London, England : 1993). 2: 1041-8. PMID 7881904 DOI: 10.1016/S0969-2126(94)00107-3 |
0.548 |
|
| 1993 |
Clubb RT, Thanabal V, Fejzo J, Ferguson SB, Zydowsky L, Baker CH, Walsh CT, Wagner G. Secondary structure and backbone resonance assignments of the periplasmic cyclophilin type peptidyl-prolyl isomerase from Escherichia coli. Biochemistry. 32: 6391-401. PMID 8518284 DOI: 10.1021/Bi00076A012 |
0.532 |
|
| 1992 |
Clubb RT, Thanabal V, Wagner G. A new 3D HN(CA)HA experiment for obtaining fingerprint HN-Halpha peaks in 15N- and 13C-labeled proteins. Journal of Biomolecular Nmr. 2: 203-10. PMID 1422153 DOI: 10.1007/Bf01875531 |
0.439 |
|
| 1992 |
Clubb RT, Wagner G. A triple-resonance pulse scheme for selectively correlating amide 1HN and 15N nuclei with the 1H alpha proton of the preceding residue. Journal of Biomolecular Nmr. 2: 389-94. PMID 1324757 DOI: 10.1007/Bf01874816 |
0.421 |
|
| 1992 |
Wagner G, Thanabal V, Stockman BJ, Peng JW, Nirmala NR, Hyberts SG, Goldberg MS, Detlefsen DJ, Clubb RT, Adler M. NMR studies of structure and dynamics of isotope enriched proteins. Biopolymers. 32: 381-90. PMID 1320418 DOI: 10.1002/Bip.360320414 |
0.783 |
|
| 1992 |
Clubb RT, Thanabal V, Wagner G. A constant-time three-dimensional triple-resonance pulse scheme to correlate intraresidue 1HN, 15N, and 13C′ chemical shifts in 15N13C-labelled proteins Journal of Magnetic Resonance (1969). 97: 213-217. DOI: 10.1016/0022-2364(92)90252-3 |
0.448 |
|
| 1991 |
Clubb RT, Thanabal V, Osborne C, Wagner G. 1H and 15N resonance assignments of oxidized flavodoxin from Anacystis nidulans with 3D NMR. Biochemistry. 30: 7718-30. PMID 1907844 DOI: 10.1021/Bi00245A008 |
0.502 |
|
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