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Andrew Michael Simons, Ph.D. - Publications

Affiliations: 
University of Minnesota, Twin Cities, Minneapolis, MN 
Area:
Phylogenetics of fishes, phylogeography of North American freshwater fishes, evolution of trophic morphology.
Website:
https://fwcb.cfans.umn.edu/personnel/andrew-simons
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51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Keogh SM, Pfeiffer JM, Simons AM, Edie SM. Riverine flow rate drives widespread convergence in the shell morphology of imperiled freshwater mussels. Evolution; International Journal of Organic Evolution. PMID 37862600 DOI: 10.1093/evolut/qpad190  0.331
2021 Williams KL, Evans KM, Simons AM. Tooth replacement and attachment morphology in the Pacific Leaping Blenny, Alticus arnoldorum (Blenniiformes: Blenniidae: Salariini) with a discussion on tooth function. Anatomical Record (Hoboken, N.J. : 2007). PMID 34708582 DOI: 10.1002/ar.24819  0.715
2019 Keogh SM, Simons AM. Molecules and morphology reveal 'new' widespread North American freshwater mussel species (Bivalvia: Unionidae). Molecular Phylogenetics and Evolution. PMID 31129350 DOI: 10.1016/J.Ympev.2019.05.029  0.543
2018 Gibbs S, Hundt PJ, Nelson A, Egan JP, Tongnunui P, Simons AM. Systematics of the combtooth blenny clade Omobranchus (Blenniidae: Omobranchini), with notes on early life history stages. Zootaxa. 4369: 270-280. PMID 29689891 DOI: 10.11646/Zootaxa.4369.2.7  0.451
2018 Egan JP, Bloom DD, Kuo CH, Hammer MP, Tongnunui P, Iglésias SP, Sheaves M, Grudpan C, Simons AM. Phylogenetic analysis of trophic niche evolution reveals a latitudinal herbivory gradient in Clupeoidei (herrings, anchovies, and allies). Molecular Phylogenetics and Evolution. PMID 29551522 DOI: 10.1016/J.Ympev.2018.03.011  0.474
2018 Egan JP, Gibbs S, Simons AM. Trophic niches through ontogeny in 12 species of Indo-Pacific marine Clupeoidei (herrings, sardines, and anchovies) Marine Biology. 165. DOI: 10.1007/S00227-018-3410-3  0.403
2017 Egan JP, Chew US, Kuo CH, Villarroel-Diaz V, Hundt PJ, Iwinski NG, Hammer MP, Simons AM. Diets and trophic guilds of small fishes from coastal marine habitats in western Taiwan. Journal of Fish Biology. PMID 28593647 DOI: 10.1111/Jfb.13355  0.439
2017 Hundt PJ, Hundt MJ, Staley C, Sadowsky MJ, Simons AM. The Diet and Gut Microbial Communities of Two Closely Related Combtooth Blennies, Chasmodes saburrae and Scartella cristata Copeia. 105: 249-256. DOI: 10.1643/Ci-16-505  0.449
2017 Hirt MV, Arratia G, Chen W, Mayden RL, Tang KL, Wood RM, Simons AM. Effects of gene choice, base composition and rate heterogeneity on inference and estimates of divergence times in cypriniform fishes Biological Journal of the Linnean Society. 121: 319-339. DOI: 10.1093/Biolinnean/Blw045  0.694
2016 Kim D, Hirt MV, Simons AM, Won YJ. Small fishes crossed a large mountain range: Quaternary stream capture events and freshwater fishes on both sides of the Taebaek Mountains. Integrative Zoology. PMID 27579710 DOI: 10.1111/1749-4877.12228  0.487
2016 Hundt PJ, Berendzen PB, Simons AM. Species delimitation and phylogeography of the studfish Fundulus catenatus species group (Ovalentaria: Cyprinodontiformes) Zoological Journal of the Linnean Society. 180: 461-474. DOI: 10.1111/Zoj.12485  0.798
2015 Yang L, Sado T, Vincent Hirt M, Pasco-Viel E, Arunachalam M, Li J, Wang X, Freyhof J, Saitoh K, Simons AM, Miya M, He S, Mayden RL. Phylogeny and polyploidy: resolving the classification of cyprinine fishes (Teleostei: Cypriniformes). Molecular Phylogenetics and Evolution. 85: 97-116. PMID 25698355 DOI: 10.1016/J.Ympev.2015.01.014  0.739
2015 Ghedotti MJ, Barton RW, Simons AM, Davis MP. The first report of luminescent liver tissue in fishes: evolution and structure of bioluminescent organs in the deep-sea naked barracudinas (Aulopiformes: Lestidiidae). Journal of Morphology. 276: 310-8. PMID 25408205 DOI: 10.1002/Jmor.20341  0.332
2014 Echelle AA, Schwemm MR, Lang NJ, Nagle BC, Simons AM, Unmack PJ, Fisher WL, Hoagstrom CW. Molecular systematics and historical biogeography of the Nocomis biguttatus species group (Teleostei: Cyprinidae): nuclear and mitochondrial introgression and a cryptic Ozark species. Molecular Phylogenetics and Evolution. 81: 109-19. PMID 25251937 DOI: 10.1016/J.Ympev.2014.09.011  0.511
2014 Hundt PJ, Iglésias SP, Hoey AS, Simons AM. A multilocus molecular phylogeny of combtooth blennies (Percomorpha: Blennioidei: Blenniidae): multiple invasions of intertidal habitats. Molecular Phylogenetics and Evolution. 70: 47-56. PMID 24045103 DOI: 10.1016/J.Ympev.2013.09.001  0.57
2014 Halas D, Simons AM. Cryptic speciation reversal in the Etheostoma zonale (Teleostei: Percidae) species group, with an examination of the effect of recombination and introgression on species tree inference. Molecular Phylogenetics and Evolution. 70: 13-28. PMID 23994165 DOI: 10.1016/J.Ympev.2013.08.014  0.829
2013 Tang KL, Agnew MK, Hirt MV, Lumbantobing DN, Sado T, Teoh VH, Yang L, Bart HL, Harris PM, He S, Miya M, Saitoh K, Simons AM, Wood RM, Mayden RL. Limits and phylogenetic relationships of East Asian fishes in the subfamily Oxygastrinae (Teleostei: Cypriniformes: Cyprinidae). Zootaxa. 3681: 101-35. PMID 25232592 DOI: 10.11646/Zootaxa.3681.2.1  0.804
2013 Hollingsworth PR, Simons AM, Fordyce JA, Hulsey CD. Explosive diversification following a benthic to pelagic shift in freshwater fishes. Bmc Evolutionary Biology. 13: 272. PMID 24341464 DOI: 10.1186/1471-2148-13-272  0.522
2013 Hundt PJ, Simons AM, Pereira DL. Double-crested cormorants (Phalacrocorax auritus) of Leech Lake, Minnesota: Temporal variation of diets and assessment of differential prey selection in adults American Midland Naturalist. 169: 354-370. DOI: 10.1674/0003-0031-169.2.354  0.349
2012 Yang L, Arunachalam M, Sado T, Levin BA, Golubtsov AS, Freyhof J, Friel JP, Chen WJ, Hirt MV, Manickam R, Agnew MK, Simons AM, Saitoh K, Miya M, Mayden RL, et al. Molecular phylogeny of the cyprinid tribe Labeonini (Teleostei: Cypriniformes). Molecular Phylogenetics and Evolution. 65: 362-79. PMID 22728909 DOI: 10.1016/J.Ympev.2012.06.007  0.754
2012 Nagle BC, Simons AM. Rapid diversification in the North American minnow genus Nocomis. Molecular Phylogenetics and Evolution. 63: 639-49. PMID 22415015 DOI: 10.1016/J.Ympev.2012.02.013  0.573
2012 Gamble T, Colli GR, Rodrigues MT, Werneck FP, Simons AM. Phylogeny and cryptic diversity in geckos (Phyllopezus; Phyllodactylidae; Gekkota) from South America's open biomes. Molecular Phylogenetics and Evolution. 62: 943-53. PMID 22182991 DOI: 10.1016/J.Ympev.2011.11.033  0.699
2012 Yang L, Vincent Hirt M, Sado T, Arunachalam M, Manickam R, Tang KL, Simons AM, Wu HH, Mayden RL, Miya M. Phylogenetic placements of the barbin genera Discherodontus, Chagunius, and Hypselobarbus in the subfamily Cyprininae (Teleostei: Cypriniformes) and their relationships with other barbins Zootaxa. 26-40. DOI: 10.11646/Zootaxa.3586.1.5  0.801
2011 Tang KL, Agnew MK, Chen WJ, Vincent Hirt M, Raley ME, Sado T, Schneider LM, Yang L, Bart HL, He S, Liu H, Miya M, Saitoh K, Simons AM, Wood RM, et al. Phylogeny of the gudgeons (Teleostei: Cyprinidae: Gobioninae). Molecular Phylogenetics and Evolution. 61: 103-24. PMID 21672635 DOI: 10.1016/J.Ympev.2011.05.022  0.787
2011 Gamble T, Bauer AM, Colli GR, Greenbaum E, Jackman TR, Vitt LJ, Simons AM. Coming to America: multiple origins of New World geckos. Journal of Evolutionary Biology. 24: 231-44. PMID 21126276 DOI: 10.1111/J.1420-9101.2010.02184.X  0.667
2011 MABEE PM, GREY EA, ARRATIA G, BOGUTSKAYA N, BORON A, COBURN †M, CONWAY KW, HE S, NASEKA A, RIOS N, SIMONS A, SZLACHCIAK J, WANG X. Gill arch and hyoid arch diversity and cypriniform phylogeny: Distributed integration of morphology and web-based tools Zootaxa. 2877: 1. DOI: 10.11646/Zootaxa.2877.1.1  0.531
2010 Tang KL, Agnew MK, Hirt MV, Sado T, Schneider LM, Freyhof J, Sulaiman Z, Swartz E, Vidthayanon C, Miya M, Saitoh K, Simons AM, Wood RM, Mayden RL. Systematics of the subfamily Danioninae (Teleostei: Cypriniformes: Cyprinidae). Molecular Phylogenetics and Evolution. 57: 189-214. PMID 20553898 DOI: 10.1016/J.Ympev.2010.05.021  0.81
2010 EGGE JJD, SIMONS AM. Evolution of venom delivery structures in madtom catfishes (Siluriformes: Ictaluridae) Biological Journal of the Linnean Society. 102: 115-129. DOI: 10.1111/J.1095-8312.2010.01578.X  0.463
2009 Mayden RL, Chen WJ, Bart HL, Doosey MH, Simons AM, Tang KL, Wood RM, Agnew MK, Yang L, Hirt MV, Clements MD, Saitoh K, Sado T, Miya M, Nishida M. Reconstructing the phylogenetic relationships of the earth's most diverse clade of freshwater fishes--order Cypriniformes (Actinopterygii: Ostariophysi): a case study using multiple nuclear loci and the mitochondrial genome. Molecular Phylogenetics and Evolution. 51: 500-14. PMID 19141325 DOI: 10.1016/J.Ympev.2008.12.015  0.809
2009 EGGE JJD, SIMONS AM. Molecules, morphology, missing data and the phylogenetic position of a recently extinct madtom catfish (Actinopterygii: Ictaluridae) Zoological Journal of the Linnean Society. 155: 60-75. DOI: 10.1111/J.1096-3642.2008.00432.X  0.495
2008 Gamble T, Berendzen PB, Shaffer HB, Starkey DE, Simons AM. Species limits and phylogeography of North American cricket frogs (Acris: Hylidae). Molecular Phylogenetics and Evolution. 48: 112-25. PMID 18462953 DOI: 10.1016/J.Ympev.2008.03.015  0.825
2008 Gamble T, Simons AM, Colli GR, Vitt LJ. Tertiary climate change and the diversification of the Amazonian gecko genus Gonatodes (Sphaerodactylidae, Squamata). Molecular Phylogenetics and Evolution. 46: 269-77. PMID 17919937 DOI: 10.1016/J.Ympev.2007.08.013  0.719
2008 Berendzen PB, Simons AM, Wood RM, Dowling TE, Secor CL. Recovering cryptic diversity and ancient drainage patterns in eastern North America: historical biogeography of the Notropis rubellus species group (Teleostei: Cypriniformes). Molecular Phylogenetics and Evolution. 46: 721-37. PMID 17716926 DOI: 10.1016/J.Ympev.2007.07.008  0.797
2008 Mayden RL, Tang KL, Wood RM, Chen WJ, Agnew MK, Conway KW, Yang L, Simons AM, Bart HL, Harris PM, Li J, Wang X, Saitoh K, He S, Liu H, et al. Inferring the Tree of Life of the order Cypriniformes, the earth's most diverse clade of freshwater fishes: Implications of varied taxon and character sampling Journal of Systematics and Evolution. 46: 424-438. DOI: 10.3724/Sp.J.1002.2008.08062  0.801
2008 Berendzen PB, Gamble T, Simons AM. Phylogeography of the bigeye chub Hybopsis amblops (Teleostei: Cypriniformes): Early Pleistocene diversification and post-glacial range expansion Journal of Fish Biology. 73: 2021-2039. DOI: 10.1111/J.1095-8649.2008.02046.X  0.808
2006 Egge JJD, Simons AM. The challenge of truly cryptic diversity: diagnosis and description of a new madtom catfish (Ictaluridae: Noturus) Zoologica Scripta. 35: 581-595. DOI: 10.1111/J.1463-6409.2006.00247.X  0.526
2006 Ray JM, Wood RM, Simons AM. Phylogeography and post-glacial colonization patterns of the rainbow darter, Etheostoma caeruleum (Teleostei: Percidae) Journal of Biogeography. 33: 1550-1558. DOI: 10.1111/J.1365-2699.2006.01540.X  0.497
2004 Gamble T, Simons AM. Comparison of harvested and nonharvested painted turtle populations Wildlife Society Bulletin. 32: 1269-1277. DOI: 10.2193/0091-7648(2004)032[1269:Cohanp]2.0.Co;2  0.557
2004 Ghedotti MJ, Simons AM, Davis MP. Morphology and Phylogeny of the Studfish Clade, Subgenus Xenisma (Teleostei: Cyprinodontiformes) Copeia. 2004: 53-61. DOI: 10.1643/Ci-02-184R2  0.406
2004 Simons AM. Phylogenetic Relationships in the Genus Erimystax (Actinopterygii: Cyprinidae) Based on the CytochromebGene Copeia. 2004: 351-356. DOI: 10.1643/Cg-02-289R2  0.525
2003 Berendzen PB, Simons AM, Wood RM. Phylogeography of the northern hogsucker, Hypentelium nigricans (Teleostei: Cypriniformes): Genetic evidence for the existence of the ancient Teays River Journal of Biogeography. 30: 1139-1152. DOI: 10.1046/J.1365-2699.2003.00888.X  0.778
2003 Simons AM, Berendzen PB, Mayden RL. Molecular systematics of North American phoxinin genera (Actinopterygii: Cyprinidae) inferred from mitochondrial 12S and 16S ribosomal RNA sequences Zoological Journal of the Linnean Society. 139: 63-80. DOI: 10.1046/J.1096-3642.2003.00076.X  0.768
2002 Mayden RL, Simons AM. Crevice spawning behavior in Dionda dichroma, with comments on the evolution of spawning modes in North American shiners (Teleostei: Cyprinidae) Reviews in Fish Biology and Fisheries. 12: 327-337. DOI: 10.1023/A:1025056809814  0.619
2001 Simons AM, Wood RM, Heath LS, Kuhajda BR, Mayden RL. Phylogenetics of Scaphirhynchus based on mitochondrial DNA sequences Transactions of the American Fisheries Society. 130: 359-366. DOI: 10.1577/1548-8659(2001)130<0359:Posbom>2.0.Co;2  0.712
2000 Simons AM, Emily Knott K, Mayden RL. Assessment of Monophyly of the Minnow GenusPteronotropis(Teleostei: Cyprinidae) Copeia. 2000: 1068-1075. DOI: 10.1643/0045-8511(2000)000[1068:Aomotm]2.0.Co;2  0.588
1999 Simons AM, Mayden RL. Phylogenetic relationships of North American cyprinids and assessment of homology of the open posterior myodome Copeia. 13-21. DOI: 10.2307/1447380  0.689
1998 Simons AM, Mayden RL. Phylogenetic relationships of the western North American phoxinins (Actinopterygii: Cyprinidae) as inferred from mitochondrial 12S and 16S ribosomal RNA sequences. Molecular Phylogenetics and Evolution. 9: 308-29. PMID 9562988 DOI: 10.1006/Mpev.1997.0467  0.741
1997 Simons AM, Mayden R. Phylogenetic Relationships of the Creek Chubs and the Spine-Fins: an Enigmatic Group of North American Cyprinid Fishes (Actinopterygii: Cyprinidae). Cladistics : the International Journal of the Willi Hennig Society. 13: 187-205. PMID 34911230 DOI: 10.1111/j.1096-0031.1997.tb00315.x  0.704
1997 Roe KJ, Simons AM, Hartfield P. Identification of a fish host of the inflated heelsplitter Potamilus inflatus (Bivalvia: Unionidae) with a description of its glochidium American Midland Naturalist. 138: 48-54. DOI: 10.2307/2426653  0.452
1997 Simons AM, Mayden RL. Phylogenetic Relationships of the Creek Chubs and the Spine-Fins: An Enigmatic Group of North American Cyprinid Fishes (Actinopterygii: Cyprinidae) Cladistics. 13: 187-205. DOI: 10.1111/J.1096-0031.1997.Tb00315.X  0.725
1991 Simons AM. Phylogenetic Relationships of the Crystal Darter, Crystallaria asprella (Teleostei: Percidae) Copeia. 1991: 927. DOI: 10.2307/1446088  0.332
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