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Yasser Roudi - Publications

Affiliations: 
University College London, London, United Kingdom 
 NTNU, Trondheim, Sør-Trøndelag, Norway 
Area:
Computational neuroscience
Website:
http://www.ntnu.edu/kavli/research/roudi
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49 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Schönsberg F, Roudi Y, Treves A. Efficiency of Local Learning Rules in Threshold-Linear Associative Networks. Physical Review Letters. 126: 018301. PMID 33480759 DOI: 10.1103/PhysRevLett.126.018301  0.467
2020 Tombaz T, Dunn BA, Hovde K, Cubero RJ, Mimica B, Mamidanna P, Roudi Y, Whitlock JR. Action representation in the mouse parieto-frontal network. Scientific Reports. 10: 5559. PMID 32221342 DOI: 10.1038/S41598-020-62089-6  0.75
2020 Cubero RJ, Marsili M, Roudi Y. Multiscale relevance and informative encoding in neuronal spike trains. Journal of Computational Neuroscience. PMID 31993923 DOI: 10.1007/s10827-020-00740-x  0.781
2019 Monsalve-Mercado MM, Roudi Y. Hippocampal spike-time correlations and place field overlaps during open field foraging. Hippocampus. PMID 31675168 DOI: 10.1002/hipo.23173  0.349
2019 Cubero RJ, Jo J, Marsili M, Roudi Y, Song J. Statistical criticality arises in most informative representations Journal of Statistical Mechanics: Theory and Experiment. 2019: 063402. DOI: 10.1088/1742-5468/ab16c8  0.762
2018 Cubero RJ, Marsili M, Roudi Y. Minimum Description Length Codes Are Critical. Entropy (Basel, Switzerland). 20. PMID 33265844 DOI: 10.3390/e20100755  0.761
2018 Cubero R, Marsili M, Roudi Y. Minimum Description Length Codes Are Critical Entropy. 20: 755. DOI: 10.3390/e20100755  0.764
2017 Kanter BR, Lykken CM, Avesar D, Weible A, Dickinson J, Dunn B, Borgesius NZ, Roudi Y, Kentros CG. A Novel Mechanism for the Grid-to-Place Cell Transformation Revealed by Transgenic Depolarization of Medial Entorhinal Cortex Layer II. Neuron. 93: 1480-1492.e6. PMID 28334610 DOI: 10.1016/J.Neuron.2017.03.001  0.762
2017 Battistin C, Dunn B, Roudi Y. Learning with unknowns: Analyzing biological data in the presence of hidden variables Current Opinion in Systems Biology. 1: 122-128. DOI: 10.1016/J.COISB.2016.12.010  0.753
2016 Rowland DC, Roudi Y, Moser MB, Moser EI. Ten Years of Grid Cells. Annual Review of Neuroscience. PMID 27023731 DOI: 10.1146/Annurev-Neuro-070815-013824  0.39
2016 Hertz JA, Roudi Y, Sollich P. Path integral methods for the dynamics of stochastic and disordered systems Journal of Physics a: Mathematical and Theoretical. 50: 033001. DOI: 10.1088/1751-8121/50/3/033001  0.545
2016 Bachschmid-Romano L, Battistin C, Opper M, Roudi Y. Variational perturbation and extended Plefka approaches to dynamics on random networks: the case of the kinetic Ising model Journal of Physics A. 49: 434003. DOI: 10.1088/1751-8113/49/43/434003  0.359
2016 Bulso N, Marsili M, Roudi Y. Sparse model selection in the highly under-sampled regime Journal of Statistical Mechanics: Theory and Experiment. 2016: 093404. DOI: 10.1088/1742-5468/2016/09/093404  0.356
2015 Roudi Y, Taylor G. Learning with hidden variables. Current Opinion in Neurobiology. 35: 110-118. PMID 26298193 DOI: 10.1016/J.Conb.2015.07.006  0.381
2015 Dunn B, Mørreaunet M, Roudi Y. Correlations and functional connections in a population of grid cells. Plos Computational Biology. 11: e1004052. PMID 25714908 DOI: 10.1371/Journal.Pcbi.1004052  0.73
2015 Roudi Y, Dunn B, Hertz J. Multi-neuronal activity and functional connectivity in cell assemblies. Current Opinion in Neurobiology. 32: 38-44. PMID 25463563 DOI: 10.1016/J.Conb.2014.10.011  0.79
2015 Borysov SS, Roudi Y, Balatsky AV. U.S. stock market interaction network as learned by the Boltzmann machine European Physical Journal B. 88: 1-14. DOI: 10.1140/epjb/e2015-60282-3  0.328
2015 Opper M, Roudi Y, Sollich P. Special issue on modelling and inference in the dynamics of complex interaction networks: advanced approximation techniques Journal of Physics a: Mathematical and Theoretical. 48: 230201. DOI: 10.1088/1751-8113/48/23/230201  0.331
2015 Battistin C, Hertz J, Tyrcha J, Roudi Y. Belief propagation and replicas for inference and learning in a kinetic Ising model with hidden spins Journal of Statistical Mechanics: Theory and Experiment. 2015. DOI: 10.1088/1742-5468/2015/05/P05021  0.606
2014 Moser EI, Roudi Y, Witter MP, Kentros C, Bonhoeffer T, Moser MB. Grid cells and cortical representation. Nature Reviews. Neuroscience. 15: 466-81. PMID 24917300 DOI: 10.1038/Nrn3766  0.353
2014 Roudi Y, Moser EI. Grid cells in an inhibitory network. Nature Neuroscience. 17: 639-41. PMID 24883451 DOI: 10.1038/nn.3704  0.41
2014 Moser EI, Moser MB, Roudi Y. Network mechanisms of grid cells. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 369: 20120511. PMID 24366126 DOI: 10.1098/Rstb.2012.0511  0.425
2014 Zeng HL, Hertz J, Roudi Y. L1regularization for reconstruction of a non-equilibrium Ising model Physica Scripta. 89. DOI: 10.1088/0031-8949/89/10/105002  0.602
2013 Zeng HL, Alava M, Aurell E, Hertz J, Roudi Y. Maximum likelihood reconstruction for Ising models with asynchronous updates. Physical Review Letters. 110: 210601. PMID 23745850 DOI: 10.1103/Physrevlett.110.210601  0.607
2013 Dunn B, Roudi Y. Learning and inference in a nonequilibrium Ising model with hidden nodes. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 87: 022127. PMID 23496479 DOI: 10.1103/Physreve.87.022127  0.733
2013 Bomash I, Roudi Y, Nirenberg S. A virtual retina for studying population coding. Plos One. 8: e53363. PMID 23341940 DOI: 10.1371/journal.pone.0053363  0.375
2013 Bonnevie T, Dunn B, Fyhn M, Hafting T, Derdikman D, Kubie JL, Roudi Y, Moser EI, Moser MB. Grid cells require excitatory drive from the hippocampus. Nature Neuroscience. 16: 309-17. PMID 23334581 DOI: 10.1038/Nn.3311  0.77
2013 Couey JJ, Witoelar A, Zhang SJ, Zheng K, Ye J, Dunn B, Czajkowski R, Moser MB, Moser EI, Roudi Y, Witter MP. Recurrent inhibitory circuitry as a mechanism for grid formation. Nature Neuroscience. 16: 318-24. PMID 23334580 DOI: 10.1038/Nn.3310  0.773
2013 Marsili M, Mastromatteo I, Roudi Y. On sampling and modeling complex systems Journal of Statistical Mechanics: Theory and Experiment. 2013. DOI: 10.1088/1742-5468/2013/09/P09003  0.342
2013 Tyrcha J, Roudi Y, Marsili M, Hertz J. The effect of nonstationarity on models inferred from neural data Journal of Statistical Mechanics: Theory and Experiment. 2013. DOI: 10.1088/1742-5468/2013/03/P03005  0.681
2012 Giocomo LM, Roudi Y. The neural encoding of space in parahippocampal cortices. Frontiers in Neural Circuits. 6: 53. PMID 22912603 DOI: 10.3389/Fncir.2012.00053  0.361
2012 Sakellariou J, Roudi Y, Mezard M, Hertz J. Effect of coupling asymmetry on mean-field solutions of the direct and inverse Sherrington-Kirkpatrick model Philosophical Magazine. 92: 272-279. DOI: 10.1080/14786435.2011.634857  0.586
2011 Roudi Y, Hertz J. Mean field theory for nonequilibrium network reconstruction. Physical Review Letters. 106: 048702. PMID 21405370 DOI: 10.1103/PhysRevLett.106.048702  0.631
2011 Witoelar A, Roudi Y. Neural network reconstruction using kinetic Ising models with memory Bmc Neuroscience. 12. DOI: 10.1186/1471-2202-12-S1-P274  0.741
2011 Tyrcha J, Roudi Y, Hertz J. Network inference from non-stationary spike trains Bmc Neuroscience. 12: P150. DOI: 10.1186/1471-2202-12-S1-P150  0.335
2011 Roudi Y, Hertz J. Dynamical TAP equations for non-equilibrium Ising spin glasses Journal of Statistical Mechanics: Theory and Experiment. 2011. DOI: 10.1088/1742-5468/2011/03/P03031  0.57
2010 Hertz JA, Roudi Y, Thorning A, Tyrcha J, Aurell E, Zeng H. Inferring network connectivity using kinetic Ising models Bmc Neuroscience. 11. DOI: 10.1186/1471-2202-11-S1-P51  0.684
2009 Roudi Y, Aurell E, Hertz JA. Statistical physics of pairwise probability models. Frontiers in Computational Neuroscience. 3: 22. PMID 19949460 DOI: 10.3389/Neuro.10.022.2009  0.621
2009 Roudi Y, Tyrcha J, Hertz J. Ising model for neural data: model quality and approximate methods for extracting functional connectivity. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 79: 051915. PMID 19518488 DOI: 10.1103/PhysRevE.79.051915  0.684
2009 Roudi Y, Nirenberg S, Latham PE. Pairwise maximum entropy models for studying large biological systems: when they can work and when they can't. Plos Computational Biology. 5: e1000380. PMID 19424487 DOI: 10.1371/journal.pcbi.1000380  0.533
2009 Latham P, Roudi Y. Mutual information Scholarpedia. 4: 1658. DOI: 10.4249/scholarpedia.1658  0.416
2009 Roudi Y, Tyrcha J, Hertz J. Fast and reliable methods for extracting functional connectivity in large populations Bmc Neuroscience. 10. DOI: 10.1186/1471-2202-10-S1-O9  0.57
2008 Roudi Y, Treves A. Representing where along with what information in a model of a cortical patch. Plos Computational Biology. 4: e1000012. PMID 18369416 DOI: 10.1371/journal.pcbi.1000012  0.582
2007 Roudi Y, Latham PE. A balanced memory network. Plos Computational Biology. 3: 1679-700. PMID 17845070 DOI: 10.1371/journal.pcbi.0030141  0.593
2006 Roudi Y, Treves A. Localized activity profiles and storage capacity of rate-based autoassociative networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 73: 061904. PMID 16906861 DOI: 10.1103/PhysRevE.73.061904  0.582
2006 Roudi Y, Treves A. An evolutionary niche for quantitative theoretical analyses? Behavioral and Brain Sciences. 29: 23. DOI: 10.1017/S0140525X06329019  0.445
2005 Treves A, Roudi Y. Course 13 Of the evolution of the brain Les Houches Summer School Proceedings. 80: 641-689. DOI: 10.1016/S0924-8099(05)80019-8  0.332
2004 Roudi Y, Treves A. An associative network with spatially organized connectivity Journal of Statistical Mechanics: Theory and Experiment. DOI: 10.1088/1742-5468/2004/07/P07010  0.552
2003 Roudi Y, Treves A. Disappearance of spurious states in analog associative memories. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 67: 041906. PMID 12786395 DOI: 10.1103/Physreve.67.041906  0.486
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