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Jeffrey W. Ruberti - Publications

Affiliations: 
Mechanical and Industrial Engineering Northeastern University, Boston, MA, United States 
Area:
Biomedical Engineering, Mechanical Engineering, Chemical Engineering
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51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Siadat SM, Ruberti JW. Mechanochemistry of collagen. Acta Biomaterialia. PMID 36669548 DOI: 10.1016/j.actbio.2023.01.025  0.464
2021 Siadat SM, Silverman AA, Susilo ME, Paten JA, DiMarzio CA, Ruberti JW. Development of Fluorescently Labeled, Functional Type I Collagen Molecules. Macromolecular Bioscience. e2100144. PMID 34856056 DOI: 10.1002/mabi.202100144  0.322
2021 Alzola RP, Siadat SM, Gajjar A, Stureborg R, Ruberti JW, Delpiano J, DiMarzio CA. Method for measurement of collagen monomer orientation in fluorescence microscopy. Journal of Biomedical Optics. 26. PMID 34240588 DOI: 10.1117/1.JBO.26.7.076501  0.374
2021 Siadat SM, Silverman AA, DiMarzio CA, Ruberti JW. Measuring collagen fibril diameter with differential interference contrast microscopy. Journal of Structural Biology. 213: 107697. PMID 33545351 DOI: 10.1016/j.jsb.2021.107697  0.303
2019 Paten JA, Martin CL, Wanis JT, Siadat SM, Figueroa-Navedo AM, Ruberti JW, Deravi LF. Molecular Interactions between Collagen and Fibronectin: A Reciprocal Relationship that Regulates De Novo Fibrillogenesis Chem. 5: 2126-2145. DOI: 10.1016/J.Chempr.2019.05.011  0.466
2018 Wu PJ, Kabakova IV, Ruberti JW, Sherwood JM, Dunlop IE, Paterson C, Török P, Overby DR. Water content, not stiffness, dominates Brillouin spectroscopy measurements in hydrated materials. Nature Methods. 15: 561-562. PMID 30065366 DOI: 10.1038/S41592-018-0076-1  0.317
2018 Chen ML, Ruberti JW, Nguyen TD. Increased stiffness of collagen fibrils following cyclic tensile loading. Journal of the Mechanical Behavior of Biomedical Materials. 82: 345-354. PMID 29655120 DOI: 10.1016/J.Jmbbm.2018.03.027  0.496
2018 Chantre CO, Campbell PH, Golecki HM, Buganza AT, Capulli AK, Deravi LF, Dauth S, Sheehy SP, Paten JA, Gledhill K, Doucet YS, Abaci HE, Ahn S, Pope BD, Ruberti JW, et al. Production-scale fibronectin nanofibers promote wound closure and tissue repair in a dermal mouse model. Biomaterials. 166: 96-108. PMID 29549768 DOI: 10.1016/J.Biomaterials.2018.03.006  0.379
2018 Pouran B, Moshtagh PR, Arbabi V, Snabel J, Stoop R, Ruberti J, Malda J, Zadpoor AA, Weinans H. Non-enzymatic cross-linking of collagen type II fibrils is tuned via osmolality switch. Journal of Orthopaedic Research : Official Publication of the Orthopaedic Research Society. PMID 29334127 DOI: 10.1002/Jor.23857  0.455
2017 Paten JA, Siadat SM, Susilo ME, Ismail EN, Stoner JL, Rothstein JP, Ruberti JW. Correction to Flow-Induced Crystallization of Collagen: A Potentially Critical Mechanism in Early Tissue Formation. Acs Nano. PMID 28792727 DOI: 10.1021/Acsnano.7B05275  0.381
2017 Pouran B, Moshtagh PR, Arbabi V, Ruberti J, Zadpoor A, Weinans H. Efficacy of Chemical Processes in Collagen Fibrils of Articular Cartilage is Osmolality Dependent Osteoarthritis and Cartilage. 25: S275-S276. DOI: 10.1016/J.Joca.2017.02.467  0.386
2016 Zareian R, Susilo ME, Paten J, McLean JP, Hollmann J, Karamichos D, Messer CS, Tambe DT, Saeidi N, Zieske JD, Ruberti JW. Human corneal fibroblast pattern evolution and matrix synthesis on mechanically-biased substrates. Tissue Engineering. Part A. PMID 27600605 DOI: 10.1089/Ten.Tea.2016.0164  0.782
2016 Susilo ME, Paten JA, Sander EA, Nguyen TD, Ruberti JW. Correction to 'Collagen network strengthening following cyclic tensile loading'. Interface Focus. 6: 20160020. PMID 27274809 DOI: 10.1098/Rsfs.2016.0020  0.301
2016 Paten JA, Siadat SM, Susilo ME, Ismail EN, Stoner JL, Rothstein JP, Ruberti JW. Flow Induced Crystallization of Collagen: A Potentially Critical Mechanism in Early Tissue Formation. Acs Nano. PMID 27070851 DOI: 10.1021/Acsnano.5B07756  0.516
2016 Wingender B, Bradley P, Saxena N, Ruberti JW, Gower L. Biomimetic organization of collagen matrices to template bone-like microstructures. Matrix Biology : Journal of the International Society For Matrix Biology. PMID 26898702 DOI: 10.1016/J.Matbio.2016.02.004  0.397
2016 Susilo ME, Paten JA, Sander EA, Nguyen TD, Ruberti JW. Collagen network strengthening following cyclic tensile loading. Interface Focus. 6: 20150088. PMID 26855760 DOI: 10.1098/Rsfs.2015.0088  0.495
2015 Tonge TK, Ruberti JW, Nguyen TD. Micromechanical Modeling Study of Mechanical Inhibition of Enzymatic Degradation of Collagen Tissues. Biophysical Journal. 109: 2689-700. PMID 26682825 DOI: 10.1016/J.Bpj.2015.10.051  0.447
2013 Karamichos D, Rich CB, Zareian R, Hutcheon AE, Ruberti JW, Trinkaus-Randall V, Zieske JD. TGF-β3 stimulates stromal matrix assembly by human corneal keratocyte-like cells. Investigative Ophthalmology & Visual Science. 54: 6612-9. PMID 24022012 DOI: 10.1167/Iovs.13-12861  0.748
2013 Kao HK, Li Q, Flynn B, Qiao X, Ruberti JW, Murphy GF, Guo L. Collagen synthesis modulated in wounds treated by pulsed radiofrequency energy. Plastic and Reconstructive Surgery. 131: 490e-8e. PMID 23542266 DOI: 10.1097/Prs.0B013E3182827636  0.715
2013 Paten JA, Tilburey GE, Molloy EA, Zareian R, Trainor CV, Ruberti JW. Utility of an optically-based, micromechanical system for printing collagen fibers. Biomaterials. 34: 2577-87. PMID 23352045 DOI: 10.1016/J.Biomaterials.2012.12.028  0.763
2013 Flynn BP, Tilburey GE, Ruberti JW. Highly sensitive single-fibril erosion assay demonstrates mechanochemical switch in native collagen fibrils. Biomechanics and Modeling in Mechanobiology. 12: 291-300. PMID 22584606 DOI: 10.1007/S10237-012-0399-2  0.777
2013 Flynn BP, Tilburey GE, Ruberti JW. Erratum to: Highly sensitive single-fibril erosion assay demonstrates mechanochemical switch in native collagen fibrils Biomechanics and Modeling in Mechanobiology. 12: 847-847. DOI: 10.1007/s10237-013-0500-5  0.732
2012 Karamichos D, Zareian R, Guo X, Hutcheon AE, Ruberti JW, Zieske JD. Novel in Vitro Model for Keratoconus Disease. Journal of Functional Biomaterials. 3: 760-775. PMID 23888249 DOI: 10.3390/Jfb3040760  0.758
2012 Mega Y, Robitaille M, Zareian R, McLean J, Ruberti J, DiMarzio C. Quantification of lamellar orientation in corneal collagen using second harmonic generation images. Optics Letters. 37: 3312-4. PMID 23381241 DOI: 10.1364/Ol.37.003312  0.758
2012 Deravi LF, Su T, Paten JA, Ruberti JW, Bertoldi K, Parker KK. Differential contributions of conformation extension and domain unfolding to properties of fibronectin nanotextiles. Nano Letters. 12: 5587-92. PMID 23043581 DOI: 10.1021/Nl302643G  0.339
2012 Saeidi N, Karmelek KP, Paten JA, Zareian R, DiMasi E, Ruberti JW. Molecular crowding of collagen: a pathway to produce highly-organized collagenous structures. Biomaterials. 33: 7366-74. PMID 22846420 DOI: 10.1016/J.Biomaterials.2012.06.041  0.815
2012 Saeidi N, Guo X, Hutcheon AE, Sander EA, Bale SS, Melotti SA, Zieske JD, Trinkaus-Randall V, Ruberti JW. Disorganized collagen scaffold interferes with fibroblast mediated deposition of organized extracellular matrix in vitro. Biotechnology and Bioengineering. 109: 2683-98. PMID 22528405 DOI: 10.1002/Bit.24533  0.77
2012 Chang SW, Flynn BP, Ruberti JW, Buehler MJ. Molecular mechanism of force induced stabilization of collagen against enzymatic breakdown. Biomaterials. 33: 3852-9. PMID 22401852 DOI: 10.1016/J.Biomaterials.2012.02.001  0.77
2012 Grytz R, Sigal IA, Ruberti JW, Meschke G, Downs JC. Lamina Cribrosa Thickening in Early Glaucoma Predicted by a Microstructure Motivated Growth and Remodeling Approach. Mechanics of Materials : An International Journal. 44: 99-109. PMID 22389541 DOI: 10.1016/J.Mechmat.2011.07.004  0.373
2012 Hadi MF, Sander EA, Ruberti JW, Barocas VH. Simulated remodeling of loaded collagen networks via strain-dependent enzymatic degradation and constant-rate fiber growth. Mechanics of Materials : An International Journal. 44: 72-82. PMID 22180691 DOI: 10.1016/J.Mechmat.2011.07.003  0.452
2011 Robitaille MC, Zareian R, Dimarzio CA, Wan KT, Ruberti JW. Small-angle light scattering to detect strain-directed collagen degradation in native tissue. Interface Focus. 1: 767-76. PMID 23050081 DOI: 10.1098/Rsfs.2011.0039  0.804
2011 Ataer-Cansizoglu E, Ghadarghadar N, Zareian R, Bas E, Ruberti JW, Erdogmus D. Motion flow analysis in cell videos using a multi-level clustering method. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 7767-70. PMID 22256139 DOI: 10.1109/IEMBS.2011.6091914  0.699
2011 Ruberti JW, Roy AS, Roberts CJ. Corneal biomechanics and biomaterials. Annual Review of Biomedical Engineering. 13: 269-95. PMID 21568714 DOI: 10.1146/Annurev-Bioeng-070909-105243  0.341
2011 Paten JA, Zareian R, Saeidi N, Melotti SA, Ruberti JW. Design and performance of an optically accessible, low-volume, mechanobioreactor for long-term study of living constructs. Tissue Engineering. Part C, Methods. 17: 775-88. PMID 21413901 DOI: 10.1089/Ten.Tec.2010.0642  0.788
2011 Saeidi N, Sander EA, Zareian R, Ruberti JW. Production of highly aligned collagen lamellae by combining shear force and thin film confinement. Acta Biomaterialia. 7: 2437-47. PMID 21362500 DOI: 10.1016/J.Actbio.2011.02.038  0.812
2011 Camp RJ, Liles M, Beale J, Saeidi N, Flynn BP, Moore E, Murthy SK, Ruberti JW. Molecular mechanochemistry: low force switch slows enzymatic cleavage of human type I collagen monomer. Journal of the American Chemical Society. 133: 4073-8. PMID 21348512 DOI: 10.1021/Ja110098B  0.815
2010 Flynn BP, Bhole AP, Saeidi N, Liles M, Dimarzio CA, Ruberti JW. Mechanical strain stabilizes reconstituted collagen fibrils against enzymatic degradation by mammalian collagenase matrix metalloproteinase 8 (MMP-8). Plos One. 5: e12337. PMID 20808784 DOI: 10.1371/Journal.Pone.0012337  0.814
2010 Zareian R, Church KP, Saeidi N, Flynn BP, Beale JW, Ruberti JW. Probing collagen/enzyme mechanochemistry in native tissue with dynamic, enzyme-induced creep. Langmuir : the Acs Journal of Surfaces and Colloids. 26: 9917-26. PMID 20429513 DOI: 10.1021/La100384E  0.763
2010 Zareian R, Saeidi N, Ruberti JW. Strain-influenced degradation of native collagenous tissue in a very-low volume, enviromentally-controlled bioreactor Asme International Mechanical Engineering Congress and Exposition, Proceedings. 2: 113-118. DOI: 10.1115/IMECE2009-13084  0.792
2009 Saeidi N, Sander EA, Ruberti JW. Dynamic shear-influenced collagen self-assembly. Biomaterials. 30: 6581-92. PMID 19765820 DOI: 10.1016/J.Biomaterials.2009.07.070  0.74
2009 Bhole AP, Flynn BP, Liles M, Saeidi N, Dimarzio CA, Ruberti JW. Mechanical strain enhances survivability of collagen micronetworks in the presence of collagenase: implications for load-bearing matrix growth and stability. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 367: 3339-62. PMID 19657003 DOI: 10.1098/Rsta.2009.0093  0.826
2009 Bueno EM, Saeidi N, Melotti S, Ruberti JW. Effect of serum and insulin modulation on the organization and morphology of matrix synthesized by bovine corneal stromal cells. Tissue Engineering. Part A. 15: 3559-73. PMID 19480568 DOI: 10.1089/Ten.Tea.2008.0404  0.74
2009 Saeidi N, Sander E, Ruberti J. Real time observation and quantification of shear-induced collagen self-assembly Proceedings of the Asme Summer Bioengineering Conference 2009, Sbc2009. 319-320. DOI: 10.1115/SBC2009-206773  0.656
2009 Flynn BP, Bhole A, DiMarzio C, Ruberti JW. A novel, label-free method for quantifying collagen fibril formation and degradation using DIC microscopy, electromagnetic wave theory, and image processing Proceedings of the Asme Summer Bioengineering Conference 2009, Sbc2009. 571-572. DOI: 10.1115/SBC2009-206592  0.701
2009 Overby DR, Ruberti JW, Gong H, Freddo TF, Johnson M. Response to "Merchant and Heys, Effects of Variable Permeability on Aqueous Humor Outflow, Applied Mathematics and Computation 196 (2008) 371-380" Applied Mathematics and Computation. 211: 251-252. DOI: 10.1016/J.Amc.2008.12.042  0.303
2008 Ruberti JW, Zieske JD. Prelude to corneal tissue engineering - gaining control of collagen organization. Progress in Retinal and Eye Research. 27: 549-77. PMID 18775789 DOI: 10.1016/J.Preteyeres.2008.08.001  0.44
2008 Ren R, Hutcheon AE, Guo XQ, Saeidi N, Melotti SA, Ruberti JW, Zieske JD, Trinkaus-Randall V. Human primary corneal fibroblasts synthesize and deposit proteoglycans in long-term 3-D cultures. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 237: 2705-15. PMID 18624285 DOI: 10.1002/Dvdy.21606  0.72
2007 Guo X, Hutcheon AE, Melotti SA, Zieske JD, Trinkaus-Randall V, Ruberti JW. Morphologic characterization of organized extracellular matrix deposition by ascorbic acid-stimulated human corneal fibroblasts. Investigative Ophthalmology & Visual Science. 48: 4050-60. PMID 17724187 DOI: 10.1167/Iovs.06-1216  0.408
2005 Ruberti JW, Hallab NJ. Strain-controlled enzymatic cleavage of collagen in loaded matrix. Biochemical and Biophysical Research Communications. 336: 483-9. PMID 16140272 DOI: 10.1016/J.Bbrc.2005.08.128  0.485
2003 Pederson AW, Ruberti JW, Messersmith PB. Thermal assembly of a biomimetic mineral/collagen composite. Biomaterials. 24: 4881-90. PMID 14530086 DOI: 10.1016/S0142-9612(03)00369-7  0.358
2002 Gong H, Ruberti J, Overby D, Johnson M, Freddo TF. A New View of the Human Trabecular Meshwork Using Quick-freeze, Deep-etch Electron Microscopy Experimental Eye Research. 75: 347-358. DOI: 10.1006/Exer.2002.2010  0.38
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