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Andrew S. Nencka, Ph.D. - Publications

Affiliations: 
2009 Medical College of Wisconsin, Milwaukee, WI, United States 
Area:
Medical Biophysics, Applied Mathematics, Statistics
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38 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 McGarry SD, Bukowy JD, Iczkowski KA, Lowman AK, Brehler M, Bobholz S, Nencka A, Barrington A, Jacobsohn K, Unteriner J, Duvnjak P, Griffin M, Hohenwalter M, Keuter T, Huang W, et al. Radio-pathomic mapping model generated using annotations from five pathologists reliably distinguishes high-grade prostate cancer. Journal of Medical Imaging (Bellingham, Wash.). 7: 054501. PMID 32923510 DOI: 10.1117/1.Jmi.7.5.054501  0.342
2020 Muftuler LT, Arpinar VE, Koch K, Bhave S, Yang B, Kaushik S, Banerjee S, Nencka A. Optimization of hyperparameters for SMS reconstruction. Magnetic Resonance Imaging. PMID 32835848 DOI: 10.1016/J.Mri.2020.08.006  0.4
2020 Wu YC, Harezlak J, Elsaid NMH, Lin Z, Wen Q, Mustafi SM, Riggen LD, Koch KM, Nencka AS, Meier TB, Mayer AR, Wang Y, Giza CC, DiFiori JP, Guskiewicz KM, et al. Longitudinal white-matter abnormalities in sports-related concussion: A diffusion MRI study. Neurology. PMID 32641518 DOI: 10.1212/Wnl.0000000000009930  0.313
2019 Mickevicius NJ, Nencka AS, Paulson ES. Generalized simultaneous multi-orientation 2D imaging. Magnetic Resonance in Medicine. PMID 31872496 DOI: 10.1002/Mrm.28150  0.383
2019 Hagler DJ, Hatton S, Cornejo MD, Makowski C, Fair DA, Dick AS, Sutherland MT, Casey BJ, Barch DM, Harms MP, Watts R, Bjork JM, Garavan HP, Hilmer L, Pung CJ, ... ... Nencka AS, et al. Image processing and analysis methods for the Adolescent Brain Cognitive Development Study. Neuroimage. 116091. PMID 31415884 DOI: 10.1016/J.Neuroimage.2019.116091  0.381
2019 Meier T, Giraldo-Chica M, Espana L, Mayer A, Harezlak J, Nencka AS, Wang Y, Koch KM, Wu YC, Saykin AJ, Giza CC, Goldman J, DiFiori JP, Guskiewicz KK, Mihalik J, et al. Resting-state fMRI metrics in acute sport-related concussion and their association with clinical recovery: A study from the NCAA-DOD CARE Consortium. Journal of Neurotrauma. PMID 31407610 DOI: 10.1089/Neu.2019.6471  0.305
2019 Rivera Bonet CN, Hermann B, Cook CJ, Hwang G, Dabbs K, Nair V, Forseth C, Mathis J, Allen L, Almane DN, Arkush K, Birn R, Conant LL, DeYoe EA, Felton E, ... ... Nencka A, et al. Neuroanatomical correlates of personality traits in temporal lobe epilepsy: Findings from the Epilepsy Connectome Project. Epilepsy & Behavior : E&B. 98: 220-227. PMID 31387000 DOI: 10.1016/J.Yebeh.2019.07.025  0.322
2019 Olson DV, Nencka AS, Arpinar VE, Muftuler LT. Analysis of errors in diffusion kurtosis imaging caused by slice crosstalk in simultaneous multi-slice imaging. Nmr in Biomedicine. e4162. PMID 31385637 DOI: 10.1002/Nbm.4162  0.358
2019 Hwang G, Dabbs K, Conant L, Nair VA, Mathis J, Almane DN, Nencka A, Birn R, Humphries C, Raghavan M, DeYoe EA, Struck AF, Maganti R, Binder JR, Meyerand E, et al. Cognitive slowing and its underlying neurobiology in temporal lobe epilepsy. Cortex; a Journal Devoted to the Study of the Nervous System and Behavior. 117: 41-52. PMID 30927560 DOI: 10.1016/J.Cortex.2019.02.022  0.301
2019 Hwang G, Nair VA, Mathis J, Cook CJ, Mohanty R, Zhao G, Tellapragada N, Ustine C, Nwoke O, Rivera-Bonet C, Rozman M, Allen L, Forseth C, Almane DN, Kraegel P, ... Nencka A, et al. Using low-frequency oscillations to detect temporal lobe epilepsy with machine learning. Brain Connectivity. PMID 30803273 DOI: 10.1089/Brain.2018.0601  0.303
2018 Kaushal M, España LY, Nencka AS, Wang Y, Nelson LD, McCrea MA, Meier TB. Resting-state functional connectivity after concussion is associated with clinical recovery. Human Brain Mapping. PMID 30451340 DOI: 10.1002/Hbm.24440  0.307
2018 Cook CJ, Hwang G, Mathis J, Nair VA, Conant L, Allen L, Almane DN, Birn R, DeYoe E, Felton E, Forseth C, Humphries C, Kraegel P, Nencka A, Nwoke O, et al. Effective Connectivity Within the Default Mode Network In Left Temporal Lobe Epilepsy: Findings from the Epilepsy Connectome Project. Brain Connectivity. PMID 30398367 DOI: 10.1089/Brain.2018.0600  0.326
2018 Wang Y, Nencka AS, Meier TB, Guskiewicz K, Mihalik JP, Alison Brooks M, Saykin AJ, Koch KM, Wu YC, Nelson LD, McAllister TW, Broglio SP, McCrea MA. Cerebral blood flow in acute concussion: preliminary ASL findings from the NCAA-DoD CARE consortium. Brain Imaging and Behavior. PMID 30159767 DOI: 10.1007/S11682-018-9946-5  0.318
2018 Koch KM, Meier TB, Karr R, Nencka AS, Muftuler LT, McCrea M. Quantitative Susceptibility Mapping after Sports-Related Concussion. Ajnr. American Journal of Neuroradiology. PMID 29880474 DOI: 10.3174/Ajnr.A5692  0.34
2018 Cohen AD, Nencka AS, Wang Y. Multiband multi-echo simultaneous ASL/BOLD for task-induced functional MRI. Plos One. 13: e0190427. PMID 29389985 DOI: 10.1371/Journal.Pone.0190427  0.386
2017 Mustafi SM, Harezlak J, Koch KM, Nencka AS, Meier T, West JD, Giza CC, DiFiori J, Guskiewicz KK, Mihalik J, LaConte SM, Duma SM, Broglio SP, Saykin AJ, McCrea M, et al. Acute White-Matter Abnormalities in Sports-Related Concussion: A Diffusion Tensor Imaging Study from the NCAA-DoD CARE Consortium. Journal of Neurotrauma. PMID 29065805 DOI: 10.1089/Neu.2017.5158  0.334
2017 Nencka AS, Meier TB, Wang Y, Muftuler LT, Wu YC, Saykin AJ, Harezlak J, Brooks MA, Giza CC, Difiori J, Guskiewicz KM, Mihalik JP, LaConte SM, Duma SM, Broglio S, et al. Stability of MRI metrics in the advanced research core of the NCAA-DoD concussion assessment, research and education (CARE) consortium. Brain Imaging and Behavior. PMID 29064019 DOI: 10.1007/S11682-017-9775-Y  0.367
2017 Cohen AD, Tomasi D, Shokri-Kojori E, Nencka AS, Wang Y. Functional connectivity density mapping: comparing multiband and conventional EPI protocols. Brain Imaging and Behavior. PMID 28676985 DOI: 10.1007/S11682-017-9742-7  0.375
2017 Cohen AD, Nencka AS, Lebel RM, Wang Y. Multiband multi-echo imaging of simultaneous oxygenation and flow timeseries for resting state connectivity. Plos One. 12: e0169253. PMID 28253268 DOI: 10.1371/Journal.Pone.0169253  0.404
2015 Rowe DB, Bruce IP, Nencka AS, Hyde JS, Kociuba MC. Separation of Parallel Encoded Complex-valued Slices (SPECS) from a Single Complex-Valued Aliased Coil Image. Magnetic Resonance Imaging. PMID 26612076 DOI: 10.1016/J.Mri.2015.11.003  0.686
2015 Huettner AM, Mickevicius NJ, Ersoz A, Koch KM, Muftuler LT, Nencka AS. Wavelet Domain Radiofrequency Pulse Design Applied to Magnetic Resonance Imaging. Plos One. 10: e0141151. PMID 26517262 DOI: 10.1371/Journal.Pone.0141151  0.348
2015 Wang Y, Nelson LD, LaRoche AA, Pfaller AY, Nencka AS, Koch KM, McCrea M. Cerebral Blood Flow Alterations in Acute Sport-Related Concussion. Journal of Neurotrauma. PMID 26414315 DOI: 10.1089/Neu.2015.4072  0.311
2015 Li R, Liu X, Sidabras JW, Paulson ES, Jesmanowicz A, Nencka AS, Hudetz AG, Hyde JS. Restoring susceptibility induced MRI signal loss in rat brain at 9.4 T: A step towards whole brain functional connectivity imaging. Plos One. 10: e0119450. PMID 25844644 DOI: 10.1371/Journal.Pone.0119450  0.371
2014 Biswal B, Pawela C, Grist T, Meyerand ME, Nencka AS, DeYoe EA, Li SJ, Rowe DB, Kiviniemi V, Cox RW, Bodurka J, Ogawa S, Koretsky A, Hu X, Kim SG. Personal reflections on James S. Hyde. Brain Connectivity. 4: 631-5. PMID 25415836 DOI: 10.1089/brain.2014.1503  0.536
2014 Karaman M, Nencka AS, Bruce IP, Rowe DB. Quantification of the statistical effects of spatiotemporal processing of nontask FMRI data. Brain Connectivity. 4: 649-61. PMID 25132113 DOI: 10.1089/Brain.2014.0278  0.657
2014 Jesmanowicz A, Nencka A, Hyde JS. Direct radiofrequency phase control in MRI by digital waveform playback at the Larmor frequency. Magnetic Resonance in Medicine. 71: 846-52. PMID 23468035 DOI: 10.1002/Mrm.24713  0.439
2013 Samuel EA, Babaei A, Kern M, Siwiec RM, Patel A, Nencka AS, Hyde JS, Venkatesan T, Shaker R. Su2093 Alterations in the Periaqueductal Gray Matter Resting State Functional Connectivity in Cyclic Vomiting Syndrome Gastroenterology. 144: S-555. DOI: 10.1016/S0016-5085(13)62054-5  0.305
2012 Babaei A, Douglas Ward B, Ahmad S, Patel A, Nencka A, Li SJ, Hyde J, Shaker R. Reproducibility of swallow-induced cortical BOLD positive and negative fMRI activity American Journal of Physiology - Gastrointestinal and Liver Physiology. 303: G600-G609. PMID 22766854 DOI: 10.1152/Ajpgi.00167.2012  0.324
2012 Hahn AD, Nencka AS, Rowe DB. Enhancing the utility of complex-valued functional magnetic resonance imaging detection of neurobiological processes through postacquisition estimation and correction of dynamic B(0) errors and motion. Human Brain Mapping. 33: 288-306. PMID 21305669 DOI: 10.1002/Hbm.21217  0.679
2011 Jesmanowicz A, Nencka AS, Li SJ, Hyde JS. Two-axis acceleration of functional connectivity magnetic resonance imaging by parallel excitation of phase-tagged slices and half k-space acceleration. Brain Connectivity. 1: 81-90. PMID 22432957 DOI: 10.1089/Brain.2011.0004  0.455
2011 Babaei A, Ahmad S, Patel A, Nencka AS, Shaker R. Participation of the Default Mode Network in the Cortical Control of Volitional Swallowing Gastroenterology. 140: S-367. DOI: 10.1016/S0016-5085(11)61500-X  0.363
2011 Patel A, Babaei A, Ahmad S, Nencka AS, Siwiec RM, Samuel EA, Shaker R. Reliability and Reproducibility of FMRI Activity in the Cortical Swallowing Network Gastroenterology. 140: S-367. DOI: 10.1016/S0016-5085(11)61498-4  0.362
2010 Prah DE, Paulson ES, Nencka AS, Schmainda KM. A simple method for rectified noise floor suppression: Phase-corrected real data reconstruction with application to diffusion-weighted imaging. Magnetic Resonance in Medicine. 64: 418-29. PMID 20665786 DOI: 10.1002/Mrm.22407  0.378
2009 Rowe DB, Hahn AD, Nencka AS. Functional magnetic resonance imaging brain activation directly from k-space. Magnetic Resonance Imaging. 27: 1370-81. PMID 19608365 DOI: 10.1016/J.Mri.2009.05.048  0.667
2009 Nencka AS, Hahn AD, Rowe DB. A Mathematical Model for Understanding the STatistical effects of k-space (AMMUST-k) preprocessing on observed voxel measurements in fcMRI and fMRI. Journal of Neuroscience Methods. 181: 268-82. PMID 19463854 DOI: 10.1016/J.Jneumeth.2009.05.007  0.683
2009 Hahn AD, Nencka AS, Rowe DB. Improving robustness and reliability of phase-sensitive fMRI analysis using temporal off-resonance alignment of single-echo timeseries (TOAST). Neuroimage. 44: 742-52. PMID 18992826 DOI: 10.1016/J.Neuroimage.2008.10.001  0.676
2007 Nencka AS, Rowe DB. Reducing the unwanted draining vein BOLD contribution in fMRI with statistical post-processing methods. Neuroimage. 37: 177-88. PMID 17560130 DOI: 10.1016/J.Neuroimage.2007.03.075  0.648
2007 Rowe DB, Nencka AS, Hoffmann RG. Signal and noise of Fourier reconstructed fMRI data. Journal of Neuroscience Methods. 159: 361-9. PMID 16945421 DOI: 10.1016/J.Jneumeth.2006.07.022  0.65
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