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James R. Roede, Ph.D. - Publications

Affiliations: 
2009 University of Colorado Anschutz Medical Campus, Denver, Aurora, CO 
Area:
Toxicology
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42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Harris PS, McGinnis CD, Michel CR, Marentette JO, Reisdorph R, Roede JR, Fritz KS. Click chemistry-based thiol redox proteomics reveals significant cysteine reduction induced by chronic ethanol consumption. Redox Biology. 64: 102792. PMID 37390786 DOI: 10.1016/j.redox.2023.102792  0.363
2021 Harris PS, Michel CR, Yun Y, McGinnis CD, Assiri MA, Ahmadi AR, Sun Z, Roede JR, Burchill MA, Orlicky DJ, McCullough RL, Fritz KS. Proteomic Analysis of Alcohol-associated Hepatitis Reveals Glycoprotein NMB (GPNMB) as a Novel Hepatic and Serum Biomarker. Alcohol (Fayetteville, N.Y.). PMID 34923085 DOI: 10.1016/j.alcohol.2021.11.005  0.319
2021 Marentette JO, Anderson CC, Prutton KM, Jennings EQ, Rauniyar AK, Galligan JJ, Roede JR. Trisomy 21 impairs PGE2 production in dermal fibroblasts. Prostaglandins & Other Lipid Mediators. 153: 106524. PMID 33418267 DOI: 10.1016/j.prostaglandins.2020.106524  0.45
2020 Anderson CC, Khatri M, Roede JR. Time-dependent simvastatin administration enhances doxorubicin toxicity in neuroblastoma. Toxicology Reports. 7: 520-528. PMID 32368502 DOI: 10.1016/J.Toxrep.2020.03.007  0.313
2020 Kuzyk CL, Anderson CC, Roede JR. Simvastatin induces delayed apoptosis through disruption of glycolysis and mitochondrial impairment in neuroblastoma cells. Clinical and Translational Science. PMID 31917509 DOI: 10.1111/Cts.12740  0.352
2020 Galligan J, Gaffney DO, Jennings EQ, Anderson CC, Marentette JO, Shi T, Oxvig AS, Streeter MD, Johannsen M, Spiegel DA, Chapman E, Roede JR. Non‐Enzymatic Lysine Lactoylation of Glycolytic Enzymes The Faseb Journal. 34: 1-1. DOI: 10.1096/Fasebj.2020.34.S1.02010  0.479
2019 Gaffney DO, Jennings EQ, Anderson CC, Marentette JO, Shi T, Schou Oxvig AM, Streeter MD, Johannsen M, Spiegel DA, Chapman E, Roede JR, Galligan JJ. Non-enzymatic Lysine Lactoylation of Glycolytic Enzymes. Cell Chemical Biology. PMID 31767537 DOI: 10.1016/J.Chembiol.2019.11.005  0.572
2019 Aivazidis S, Jain A, Rauniyar AK, Anderson CC, Marentette JO, Orlicky DJ, Fritz KS, Harris PS, Siegel D, Maclean KN, Roede JR. SNARE proteins rescue impaired autophagic flux in Down syndrome. Plos One. 14: e0223254. PMID 31714914 DOI: 10.1371/Journal.Pone.0223254  0.339
2019 Aivazidis S, Anderson CC, Roede JR. Toxicant-mediated redox control of proteostasis in neurodegeneration. Current Opinion in Toxicology. 13: 22-34. PMID 31602419 DOI: 10.1016/J.Cotox.2018.12.007  0.38
2018 Petersen DR, Orlicky DJ, Roede JR, Shearn CT. Aberrant expression of redox regulatory proteins in patients with concomitant primary Sclerosing cholangitis/inflammatory bowel disease. Experimental and Molecular Pathology. 105: 32-36. PMID 29852184 DOI: 10.1016/J.Yexmp.2018.05.012  0.567
2018 Anderson CC, Aivazidis S, Kuzyk CL, Jain A, Roede JR. Acute maneb exposure significantly alters both glycolysis and mitochondrial function in neuroblastoma cells. Toxicological Sciences : An Official Journal of the Society of Toxicology. PMID 29767788 DOI: 10.1093/Toxsci/Kfy116  0.37
2017 Maclean KN, Jiang H, Aivazidis S, Kim E, Shearn CT, Harris PS, Petersen DR, Allen RH, Stabler SP, Roede JR. Taurine treatment prevents derangement of the hepatic γ-glutamyl cycle and methylglyoxal metabolism in a mouse model of classical homocystinuria: regulatory crosstalk between thiol and sulfinic acid metabolism. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 29101223 DOI: 10.1096/Fj.201700586R  0.601
2017 Shearn CT, Saba LM, Roede JR, Orlicky DJ, Shearn AH, Petersen DR. Differential carbonylation of proteins in end-stage human fatty and nonfatty NASH. Free Radical Biology & Medicine. PMID 28988798 DOI: 10.1016/J.Freeradbiomed.2017.10.004  0.579
2017 Assiri MA, Roy SR, Harris PS, Ali H, Liang Y, Shearn CT, Orlicky DJ, Roede JR, Hirschey MD, Backos DS, Fritz KS. Chronic Ethanol Metabolism Inhibits Hepatic Mitochondrial Superoxide Dismutase via Lysine Acetylation. Alcoholism, Clinical and Experimental Research. PMID 28804911 DOI: 10.1111/Acer.13473  0.461
2017 Aivazidis S, Coughlan CM, Rauniyar AK, Jiang H, Liggett LA, Maclean KN, Roede JR. The burden of trisomy 21 disrupts the proteostasis network in Down syndrome. Plos One. 12: e0176307. PMID 28430800 DOI: 10.1371/Journal.Pone.0176307  0.326
2016 Assiri M, Harris PS, Ali H, Liang Y, Shearn CT, Roede JR, Backos DS, Fritz KS. Chronic Ethanol Consumption Alters SOD2 Dynamics through Lysine Acetylation Free Radical Biology and Medicine. 100: S98-S99. DOI: 10.1016/J.Freeradbiomed.2016.10.247  0.369
2015 Coughlan C, Walker DI, Lohr KM, Richardson JR, Saba LM, Caudle WM, Fritz KS, Roede JR. Comparative Proteomic Analysis of Carbonylated Proteins from the Striatum and Cortex of Pesticide-Treated Mice. Parkinson's Disease. 2015: 812532. PMID 26345149 DOI: 10.1155/2015/812532  0.365
2015 Harris PS, Roy SR, Coughlan C, Orlicky DJ, Liang Y, Shearn CT, Roede JR, Fritz KS. Chronic ethanol consumption induces mitochondrial protein acetylation and oxidative stress in the kidney. Redox Biology. 6: 33-40. PMID 26177469 DOI: 10.1016/J.Redox.2015.06.021  0.486
2015 Harris PS, Roy SR, Coughlan C, Orlicky DJ, Liang Y, Shearn CT, Roede JR, Fritz KS. Chronic ethanol consumption induces mitochondrial protein acetylation and oxidative stress in the kidney Redox Biology. 6: 33-40. DOI: 10.1016/j.redox.2015.06.021  0.319
2014 Roede JR, Uppal K, Park Y, Tran V, Jones DP. Transcriptome-metabolome wide association study (TMWAS) of maneb and paraquat neurotoxicity reveals network level interactions in toxicologic mechanism. Toxicology Reports. 1: 435-444. PMID 27722094 DOI: 10.1016/J.Toxrep.2014.07.006  0.332
2014 Go YM, Uppal K, Walker DI, Tran V, Dury L, Strobel FH, Baubichon-Cortay H, Pennell KD, Roede JR, Jones DP. Mitochondrial metabolomics using high-resolution Fourier-transform mass spectrometry. Methods in Molecular Biology (Clifton, N.J.). 1198: 43-73. PMID 25270922 DOI: 10.1007/978-1-4939-1258-2_4  0.349
2014 Roede JR, Jones DP. Thiol-reactivity of the fungicide maneb. Redox Biology. 2: 651-5. PMID 24936438 DOI: 10.1016/J.Redox.2014.04.007  0.433
2014 Go YM, Roede JR, Orr M, Liang Y, Jones DP. Integrated redox proteomics and metabolomics of mitochondria to identify mechanisms of cd toxicity. Toxicological Sciences : An Official Journal of the Society of Toxicology. 139: 59-73. PMID 24496640 DOI: 10.1093/Toxsci/Kfu018  0.359
2014 Harris PS, Roy SR, Coughlan CM, Roede JR, Shearn CT, Fritz KS. Chronic Ethanol Consumption Induces Mitochondrial Protein Acetylation in the Kidney Free Radical Biology and Medicine. 76: S104. DOI: 10.1016/J.Freeradbiomed.2014.10.256  0.391
2013 Roede JR, Uppal K, Park Y, Lee K, Tran V, Walker D, Strobel FH, Rhodes SL, Ritz B, Jones DP. Serum metabolomics of slow vs. rapid motor progression Parkinson's disease: a pilot study. Plos One. 8: e77629. PMID 24167579 DOI: 10.1371/Journal.Pone.0077629  0.313
2013 Go YM, Roede JR, Walker DI, Duong DM, Seyfried NT, Orr M, Liang Y, Pennell KD, Jones DP. Selective targeting of the cysteine proteome by thioredoxin and glutathione redox systems. Molecular & Cellular Proteomics : McP. 12: 3285-96. PMID 23946468 DOI: 10.1074/Mcp.M113.030437  0.4
2012 Liang Y, Roede JR, Dikalov S, Miller NG, Dudley SC, Quyyumi A, Jones DP. Determination of ebselen-sensitive reactive oxygen metabolites (ebROM) in human serum based upon N,N'-diethyl-1,4-phenylenediamine oxidation. Clinica Chimica Acta; International Journal of Clinical Chemistry. 414: 1-6. PMID 22687643 DOI: 10.1016/J.Cca.2012.06.003  0.305
2012 Roede JR, Park Y, Li S, Strobel FH, Jones DP. Detailed mitochondrial phenotyping by high resolution metabolomics. Plos One. 7: e33020. PMID 22412977 DOI: 10.1371/Journal.Pone.0033020  0.364
2012 Roede JR, Go YM, Jones DP. Redox equivalents and mitochondrial bioenergetics. Methods in Molecular Biology (Clifton, N.J.). 810: 249-80. PMID 22057573 DOI: 10.1007/978-1-61779-382-0_17  0.328
2011 Kunde SS, Roede JR, Vos MB, Orr ML, Go YM, Park Y, Ziegler TR, Jones DP. Hepatic oxidative stress in fructose-induced fatty liver is not caused by sulfur amino acid insufficiency. Nutrients. 3: 987-1002. PMID 22254090 DOI: 10.3390/Nu3110987  0.395
2011 Orlicky DJ, Roede JR, Bales E, Greenwood C, Greenberg A, Petersen D, McManaman JL. Chronic ethanol consumption in mice alters hepatocyte lipid droplet properties. Alcoholism, Clinical and Experimental Research. 35: 1020-33. PMID 21535024 DOI: 10.1111/J.1530-0277.2011.01434.X  0.621
2011 Go YM, Kang SM, Roede JR, Orr M, Jones DP. Increased inflammatory signaling and lethality of influenza H1N1 by nuclear thioredoxin-1. Plos One. 6: e18918. PMID 21526215 DOI: 10.1371/Journal.Pone.0018918  0.347
2011 Fritz KS, Galligan JJ, Smathers RL, Roede JR, Shearn CT, Reigan P, Petersen DR. 4-Hydroxynonenal inhibits SIRT3 via thiol-specific modification. Chemical Research in Toxicology. 24: 651-62. PMID 21449565 DOI: 10.1021/Tx100355A  0.708
2011 Roede JR, Hansen JM, Go YM, Jones DP. Maneb and paraquat-mediated neurotoxicity: involvement of peroxiredoxin/thioredoxin system. Toxicological Sciences : An Official Journal of the Society of Toxicology. 121: 368-75. PMID 21402726 DOI: 10.1093/Toxsci/Kfr058  0.388
2011 Galligan JJ, Fritz KS, Tipney H, Smathers RL, Roede JR, Shearn CT, Hunter LE, Petersen DR. Profiling impaired hepatic endoplasmic reticulum glycosylation as a consequence of ethanol ingestion. Journal of Proteome Research. 10: 1837-47. PMID 21319786 DOI: 10.1021/Pr101101S  0.693
2011 Backos DS, Fritz KS, Roede JR, Petersen DR, Franklin CC. Posttranslational modification and regulation of glutamate-cysteine ligase by the α,β-unsaturated aldehyde 4-hydroxy-2-nonenal. Free Radical Biology & Medicine. 50: 14-26. PMID 20970495 DOI: 10.1016/J.Freeradbiomed.2010.10.694  0.619
2010 Roede JR, Jones DP. Reactive species and mitochondrial dysfunction: mechanistic significance of 4-hydroxynonenal. Environmental and Molecular Mutagenesis. 51: 380-90. PMID 20544880 DOI: 10.1002/Em.20553  0.361
2010 Fritz KS, Galligan JJ, Smathers RL, Roede JR, Shearn CT, Reigan P, Petersen DR. Reactive Aldehyde 4-Hydroxynonenal Inhibits Mitochondrial Sirt3 Deacetylase Activity Free Radical Biology and Medicine. 49: S87. DOI: 10.1016/J.Freeradbiomed.2010.10.221  0.63
2009 Stewart BJ, Roede JR, Doorn JA, Petersen DR. Lipid aldehyde-mediated cross-linking of apolipoprotein B-100 inhibits secretion from HepG2 cells. Biochimica Et Biophysica Acta. 1791: 772-80. PMID 19393338 DOI: 10.1016/J.Bbalip.2009.04.004  0.609
2009 Roede JR, Orlicky DJ, Fisher AB, Petersen DR. Overexpression of peroxiredoxin 6 does not prevent ethanol-mediated oxidative stress and may play a role in hepatic lipid accumulation. The Journal of Pharmacology and Experimental Therapeutics. 330: 79-88. PMID 19386791 DOI: 10.1124/Jpet.109.152983  0.612
2008 Roede JR, Carbone DL, Doorn JA, Kirichenko OV, Reigan P, Petersen DR. In vitro and in silico characterization of peroxiredoxin 6 modified by 4-hydroxynonenal and 4-oxononenal. Chemical Research in Toxicology. 21: 2289-99. PMID 19548352 DOI: 10.1021/Tx800244U  0.704
2008 Roede JR, Stewart BJ, Petersen DR. Decreased expression of peroxiredoxin 6 in a mouse model of ethanol consumption. Free Radical Biology & Medicine. 45: 1551-8. PMID 18852041 DOI: 10.1016/J.Freeradbiomed.2008.08.032  0.628
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