Archana Dhasarathy, Ph.D. - Publications

Affiliations: 
2004 Texas A & M University, College Station, TX, United States 
Area:
Molecular Biology, Genetics

23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Chen H, Yan C, Dhasarathy A, Kladde M, Bai L. Investigating pioneer factor activity and its coordination with chromatin remodelers using integrated synthetic oligo assay. Star Protocols. 4: 102279. PMID 37289591 DOI: 10.1016/j.xpro.2023.102279  0.651
2022 Chen H, Kharerin H, Dhasarathy A, Kladde M, Bai L. Partitioned usage of chromatin remodelers by nucleosome-displacing factors. Cell Reports. 40: 111250. PMID 36001970 DOI: 10.1016/j.celrep.2022.111250  0.663
2022 Cooper M, Ray A, Bhattacharya A, Dhasarathy A, Takaku M. ATAC-seq Optimization for Cancer Epigenetics Research. Journal of Visualized Experiments : Jove. PMID 35848835 DOI: 10.3791/64242  0.466
2019 Schacke M, Kumar J, Colwell N, Hermanson K, Folle GA, Nechaev S, Dhasarathy A, Lafon-Hughes L. PARP-1/2 Inhibitor Olaparib Prevents or Partially Reverts EMT Induced by TGF-β in NMuMG Cells. International Journal of Molecular Sciences. 20. PMID 30691122 DOI: 10.3390/Ijms20030518  0.319
2018 Bhattacharya A, Kumar J, Hermanson K, Sun Y, Qureshi H, Perley D, Scheidegger A, Singh BB, Dhasarathy A. The calcium channel proteins ORAI3 and STIM1 mediate TGF-β induced expression. Oncotarget. 9: 29468-29483. PMID 30034631 DOI: 10.18632/Oncotarget.25672  0.323
2017 Ye Y, Lin P, Zhang W, Tan S, Zhou X, Li R, Pu Q, Koff JL, Dhasarathy A, Ma F, Deng X, Jiang J, Wu M. Correction: DNA Repair Interacts with Autophagy To Regulate Inflammatory Responses to Pulmonary Hyperoxia. Journal of Immunology (Baltimore, Md. : 1950). 199: 1207. PMID 28739596 DOI: 10.4049/Jimmunol.1700711  0.335
2017 Ye Y, Lin P, Zhang W, Tan S, Zhou X, Li R, Pu Q, Koff JL, Dhasarathy A, Ma F, Deng X, Jiang J, Wu M. Response to Comment on "DNA Repair Interacts with Autophagy To Regulate Inflammatory Responses to Pulmonary Hyperoxia". Journal of Immunology (Baltimore, Md. : 1950). 199: 381-382. PMID 28696327 DOI: 10.4049/Jimmunol.1700676  0.413
2017 Ye Y, Lin P, Zhang W, Tan S, Zhou X, Li R, Pu Q, Koff JL, Dhasarathy A, Ma F, Deng X, Jiang J, Wu M. DNA Repair Interacts with Autophagy To Regulate Inflammatory Responses to Pulmonary Hyperoxia. Journal of Immunology (Baltimore, Md. : 1950). PMID 28202616 DOI: 10.4049/Jimmunol.1601001  0.352
2015 Zarns K, Desell T, Nechaev S, Dhasarathy A. Searching the Human Genome for Snail and Slug With DNA@Home. Proceedings ... Ieee International Conference On Escience. Ieee International Conference On Escience. 2015: 429-438. PMID 26998498 DOI: 10.1109/eScience.2015.27  0.35
2015 Warns JA, Davie JR, Dhasarathy A. Connecting the dots: chromatin and alternative splicing in EMT. Biochemistry and Cell Biology = Biochimie Et Biologie Cellulaire. 1-14. PMID 26291837 DOI: 10.1139/Bcb-2015-0053  0.49
2015 Samarakkody A, Abbas A, Scheidegger A, Warns J, Nnoli O, Jokinen B, Zarns K, Kubat B, Dhasarathy A, Nechaev S. RNA polymerase II pausing can be retained or acquired during activation of genes involved in the epithelial to mesenchymal transition. Nucleic Acids Research. 43: 3938-49. PMID 25820424 DOI: 10.1093/Nar/Gkv263  0.365
2014 Shimbo T, Du Y, Grimm SA, Dhasarathy A, Mav D, Shah RR, Shi H, Wade PA. Abstract 405: Mbd3 localizes at promoters, gene bodies and enhancers of active genes Cancer Research. 74: 405-405. DOI: 10.1158/1538-7445.Am2014-405  0.467
2013 Shimbo T, Du Y, Grimm SA, Dhasarathy A, Mav D, Shah RR, Shi H, Wade PA. MBD3 localizes at promoters, gene bodies and enhancers of active genes. Plos Genetics. 9: e1004028. PMID 24385926 DOI: 10.1371/Journal.Pgen.1004028  0.546
2013 Shimbo T, Du Y, Grimm S, Dhasarathy A, Mav D, Shah R, Shi H, Wade PA. Abstract B63: MBD3 accumulates at promoters and enhancers of active genes Cancer Research. 73. DOI: 10.1158/1538-7445.Cec13-B63  0.55
2011 Dhasarathy A, Phadke D, Mav D, Shah RR, Wade PA. The transcription factors Snail and Slug activate the transforming growth factor-beta signaling pathway in breast cancer. Plos One. 6: e26514. PMID 22028892 DOI: 10.1371/Journal.Pone.0026514  0.361
2010 Lai AY, Fatemi M, Dhasarathy A, Malone C, Sobol SE, Geigerman C, Jaye DL, Mav D, Shah R, Li L, Wade PA. DNA methylation prevents CTCF-mediated silencing of the oncogene BCL6 in B cell lymphomas. The Journal of Experimental Medicine. 207: 1939-50. PMID 20733034 DOI: 10.1084/Jem.20100204  0.553
2009 Pondugula S, Neef DW, Voth WP, Darst RP, Dhasarathy A, Reynolds MM, Takahata S, Stillman DJ, Kladde MP. Coupling phosphate homeostasis to cell cycle-specific transcription: mitotic activation of Saccharomyces cerevisiae PHO5 by Mcm1 and Forkhead proteins. Molecular and Cellular Biology. 29: 4891-905. PMID 19596791 DOI: 10.1128/Mcb.00222-09  0.708
2008 Dhasarathy A, Wade PA. The MBD protein family-reading an epigenetic mark? Mutation Research. 647: 39-43. PMID 18692077 DOI: 10.1016/J.Mrfmmm.2008.07.007  0.475
2007 Dhasarathy A, Kajita M, Wade PA. The transcription factor snail mediates epithelial to mesenchymal transitions by repression of estrogen receptor-alpha. Molecular Endocrinology (Baltimore, Md.). 21: 2907-18. PMID 17761946 DOI: 10.1210/Me.2007-0293  0.305
2005 Dhasarathy A, Kladde MP. Promoter occupancy is a major determinant of chromatin remodeling enzyme requirements. Molecular and Cellular Biology. 25: 2698-707. PMID 15767675 DOI: 10.1128/Mcb.25.7.2698-2707.2005  0.72
2004 Norwood LE, Grade SK, Cryderman DE, Hines KA, Furiasse N, Toro R, Li Y, Dhasarathy A, Kladde MP, Hendrix MJ, Kirschmann DA, Wallrath LL. Conserved properties of HP1(Hsalpha). Gene. 336: 37-46. PMID 15225874 DOI: 10.1016/J.Gene.2004.04.003  0.674
2004 Jessen WJ, Dhasarathy A, Hoose SA, Carvin CD, Risinger AL, Kladde MP. Mapping chromatin structure in vivo using DNA methyltransferases. Methods (San Diego, Calif.). 33: 68-80. PMID 15039089 DOI: 10.1016/J.Ymeth.2003.10.025  0.622
2003 Carvin CD, Dhasarathy A, Friesenhahn LB, Jessen WJ, Kladde MP. Targeted cytosine methylation for in vivo detection of protein-DNA interactions. Proceedings of the National Academy of Sciences of the United States of America. 100: 7743-8. PMID 12808133 DOI: 10.1073/Pnas.1332672100  0.622
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