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Ryan M. Summers, Ph.D. - Publications

Affiliations: 
2011 Chemical & Biochemical Engineering University of Iowa, Iowa City, IA 
Area:
Chemical Engineering, Biochemistry, Molecular Biology
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16 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Mock MB, Cyrus A, Summers RM. Biocatalytic production of 7-methylxanthine by a caffeine-degrading Escherichia coli strain. Biotechnology and Bioengineering. PMID 36059194 DOI: 10.1002/bit.28212  0.351
2020 Wrist A, Sun W, Summers RM. The theophylline aptamer: 25 years as an important tool in cellular engineering research. Acs Synthetic Biology. PMID 32142605 DOI: 10.1021/Acssynbio.9B00475  0.384
2019 Kim JH, Kim BH, Brooks S, Kang SY, Summers RM, Song HK. Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. Journal of Molecular Biology. PMID 31412262 DOI: 10.1016/J.Jmb.2019.08.004  0.475
2017 Yu CL, Brooks S, Li Y, Subramanian M, Summers R, Pope M. Rapid Proteomics to Prospect and Validate Novel Bacterial Metabolism Induced by Environmental Burden. Methods in Enzymology. 586: 379-411. PMID 28137573 DOI: 10.1016/Bs.Mie.2016.11.003  0.739
2017 Algharrawi KH, Summers RM, Subramanian M. Production of theobromine by N-demethylation of caffeine using metabolically engineered E . coli Biocatalysis and Agricultural Biotechnology. 11: 153-160. DOI: 10.1016/J.Bcab.2017.06.014  0.729
2015 Algharrawi KH, Summers RM, Gopishetty S, Subramanian M. Direct conversion of theophylline to 3-methylxanthine by metabolically engineered E. coli. Microbial Cell Factories. 14: 203. PMID 26691652 DOI: 10.1186/S12934-015-0395-1  0.713
2015 Quandt EM, Summers RM, Subramanian MV, Barrick JE. Draft Genome Sequence of the Bacterium Pseudomonas putida CBB5, Which Can Utilize Caffeine as a Sole Carbon and Nitrogen Source. Genome Announcements. 3. PMID 26067973 DOI: 10.1128/Genomea.00640-15  0.704
2015 Summers RM, Mohanty SK, Gopishetty S, Subramanian M. Genetic characterization of caffeine degradation by bacteria and its potential applications. Microbial Biotechnology. 8: 369-78. PMID 25678373 DOI: 10.1111/1751-7915.12262  0.754
2015 Yu CL, Summers RM, Li Y, Mohanty SK, Subramanian M, Pope RM. Rapid identification and quantitative validation of a caffeine-degrading pathway in Pseudomonas sp. CES. Journal of Proteome Research. 14: 95-106. PMID 25350919 DOI: 10.1021/Pr500751W  0.755
2014 Nagarajan S, Kruckeberg AL, Schmidt KH, Kroll E, Hamilton M, McInnerney K, Summers R, Taylor T, Rosenzweig F. Uncoupling reproduction from metabolism extends chronological lifespan in yeast. Proceedings of the National Academy of Sciences of the United States of America. 111: E1538-47. PMID 24706810 DOI: 10.1073/Pnas.1323918111  0.351
2014 Summers RM, Gopishetty S, Mohanty SK, Subramanian M. New genetic insights to consider coffee waste as feedstock for fuel, feed, and chemicals Central European Journal of Chemistry. 12: 1271-1279. DOI: 10.2478/S11532-014-0550-2  0.751
2013 Summers RM, Seffernick JL, Quandt EM, Yu CL, Barrick JE, Subramanian MV. Caffeine junkie: an unprecedented glutathione S-transferase-dependent oxygenase required for caffeine degradation by Pseudomonas putida CBB5. Journal of Bacteriology. 195: 3933-9. PMID 23813729 DOI: 10.1128/Jb.00585-13  0.716
2013 Quandt EM, Hammerling MJ, Summers RM, Otoupal PB, Slater B, Alnahhas RN, Dasgupta A, Bachman JL, Subramanian MV, Barrick JE. Decaffeination and measurement of caffeine content by addicted Escherichia coli with a refactored N-demethylation operon from Pseudomonas putida CBB5. Acs Synthetic Biology. 2: 301-7. PMID 23654268 DOI: 10.1021/Sb4000146  0.734
2012 Summers RM, Louie TM, Yu CL, Gakhar L, Louie KC, Subramanian M. Novel, highly specific N-demethylases enable bacteria to live on caffeine and related purine alkaloids. Journal of Bacteriology. 194: 2041-9. PMID 22328667 DOI: 10.1128/Jb.06637-11  0.763
2011 Summers RM, Louie TM, Yu CL, Subramanian M. Characterization of a broad-specificity non-haem iron N-demethylase from Pseudomonas putida CBB5 capable of utilizing several purine alkaloids as sole carbon and nitrogen source. Microbiology (Reading, England). 157: 583-92. PMID 20966097 DOI: 10.1099/Mic.0.043612-0  0.712
2009 Yu CL, Louie TM, Summers R, Kale Y, Gopishetty S, Subramanian M. Two distinct pathways for metabolism of theophylline and caffeine are coexpressed in Pseudomonas putida CBB5. Journal of Bacteriology. 191: 4624-32. PMID 19447909 DOI: 10.1128/Jb.00409-09  0.718
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