Dmitri "Mitya" Chklovskii, Ph.D. - Publications

Affiliations: 
2007-2014 HHMI Janelia Farm Research Campus, Ashburn, VA, United States 
 2014- Neuroscience Simons Foundation 
Area:
Theoretical Neuroscience, Connectomics
Website:
https://www.simonsfoundation.org/simons-center-for-data-analysis/scda-neuroscience-group-dmitri-chklovskii/

53 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Suryanarayana Deo SV, Mishra A, Shukla NK, Sandeep B. Thoracoabdominal Flap: a Simple Flap for Covering Large Post-mastectomy Soft Tissue Defects in Locally Advanced Breast Cancer. Indian Journal of Surgical Oncology. 10: 494-498. PMID 31496598 DOI: 10.1007/s13193-019-00927-4  0.36
2019 Zhu Y, Zhao X, Zhang X, Liu H. Extraction, structural and functional properties of Haematococcus pluvialis protein after pigment removal. International Journal of Biological Macromolecules. PMID 31465798 DOI: 10.1016/j.ijbiomac.2019.08.209  0.4
2017 Pehlevan C, Sengupta AM, Chklovskii DB. Why Do Similarity Matching Objectives Lead to Hebbian/Anti-Hebbian Networks? Neural Computation. 1-41. PMID 28957017 DOI: 10.1162/neco_a_01018  0.8
2017 Pehlevan C, Mohan S, Chklovskii DB. Blind Nonnegative Source Separation Using Biological Neural Networks. Neural Computation. 1-30. PMID 28777718 DOI: 10.1162/neco_a_01007  0.8
2017 Takemura SY, Nern A, Chklovskii DB, Scheffer LK, Rubin GM, Meinertzhagen IA. The comprehensive connectome of a neural substrate for 'ON' motion detection in Drosophila. Elife. 6. PMID 28432786 DOI: 10.7554/eLife.24394  0.52
2016 Mizusaki BE, Stepanyants A, Chklovskii DB, Sjöström PJ. Neocortex: a lean mean memory storage machine. Nature Neuroscience. 19: 643-4. PMID 27116387 DOI: 10.1038/nn.4292  0.88
2015 Takemura SY, Xu CS, Lu Z, Rivlin PK, Parag T, Olbris DJ, Plaza S, Zhao T, Katz WT, Umayam L, Weaver C, Hess HF, Horne JA, Nunez-Iglesias J, Aniceto R, ... ... Chklovskii DB, et al. Synaptic circuits and their variations within different columns in the visual system of Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 112: 13711-6. PMID 26483464 DOI: 10.1073/pnas.1509820112  0.92
2015 Bharioke A, Chklovskii DB. Automatic Adaptation to Fast Input Changes in a Time-Invariant Neural Circuit. Plos Computational Biology. 11: e1004315. PMID 26247884 DOI: 10.1371/journal.pcbi.1004315  0.92
2015 Pehlevan C, Hu T, Chklovskii DB. A Hebbian/Anti-Hebbian Neural Network for Linear Subspace Learning: A Derivation from Multidimensional Scaling of Streaming Data. Neural Computation. 27: 1461-95. PMID 25973548 DOI: 10.1162/NECO_a_00745  0.92
2015 Butler VJ, Branicky R, Yemini E, Liewald JF, Gottschalk A, Kerr RA, Chklovskii DB, Schafer WR. A consistent muscle activation strategy underlies crawling and swimming in Caenorhabditis elegans. Journal of the Royal Society, Interface / the Royal Society. 12: 20140963. PMID 25551155 DOI: 10.1098/rsif.2014.0963  0.92
2014 Plaza SM, Scheffer LK, Chklovskii DB. Toward large-scale connectome reconstructions. Current Opinion in Neurobiology. 25: 201-10. PMID 24598270 DOI: 10.1016/j.conb.2014.01.019  0.92
2014 Rivera-Alba M, Peng H, de Polavieja GG, Chklovskii DB. Wiring economy can account for cell body placement across species and brain areas. Current Biology : Cb. 24: R109-10. PMID 24502781 DOI: 10.1016/j.cub.2013.12.012  0.92
2013 Rah JC, Bas E, Colonell J, Mishchenko Y, Karsh B, Fetter RD, Myers EW, Chklovskii DB, Svoboda K, Harris TD, Isaac JT. Thalamocortical input onto layer 5 pyramidal neurons measured using quantitative large-scale array tomography. Frontiers in Neural Circuits. 7: 177. PMID 24273494 DOI: 10.3389/fncir.2013.00177  0.92
2013 Nunez-Iglesias J, Kennedy R, Parag T, Shi J, Chklovskii DB. Machine learning of hierarchical clustering to segment 2D and 3D images. Plos One. 8: e71715. PMID 23977123 DOI: 10.1371/journal.pone.0071715  0.92
2013 Hu T, Nunez-Iglesias J, Vitaladevuni S, Scheffer L, Xu S, Bolorizadeh M, Hess H, Fetter R, Chklovskii D. Electron Microscopy Reconstruction of Brain Structure Using Sparse Representations over Learned Dictionaries. Ieee Transactions On Medical Imaging. PMID 23925366 DOI: 10.1109/TMI.2013.2276018  0.92
2013 Takemura SY, Bharioke A, Lu Z, Nern A, Vitaladevuni S, Rivlin PK, Katz WT, Olbris DJ, Plaza SM, Winston P, Zhao T, Horne JA, Fetter RD, Takemura S, Blazek K, ... ... Chklovskii DB, et al. A visual motion detection circuit suggested by Drosophila connectomics. Nature. 500: 175-81. PMID 23925240 DOI: 10.1038/nature12450  0.92
2012 Wen Q, Po MD, Hulme E, Chen S, Liu X, Kwok SW, Gershow M, Leifer AM, Butler V, Fang-Yen C, Kawano T, Schafer WR, Whitesides G, Wyart M, Chklovskii DB, et al. Proprioceptive coupling within motor neurons drives C. elegans forward locomotion. Neuron. 76: 750-61. PMID 23177960 DOI: 10.1016/j.neuron.2012.08.039  0.92
2012 Druckmann S, Chklovskii DB. Neuronal circuits underlying persistent representations despite time varying activity. Current Biology : Cb. 22: 2095-103. PMID 23084992 DOI: 10.1016/j.cub.2012.08.058  0.92
2012 Hu T, Genkin A, Chklovskii DB. A network of spiking neurons for computing sparse representations in an energy-efficient way. Neural Computation. 24: 2852-72. PMID 22920853 DOI: 10.1162/NECO_a_00353  0.92
2012 Chklovskii DB, Bargmann CI. Neuroscience. The mind of a male? Science (New York, N.Y.). 337: 416-7. PMID 22837511 DOI: 10.1126/science.1225853  0.92
2011 Rivera-Alba M, Vitaladevuni SN, Mishchenko Y, Mischenko Y, Lu Z, Takemura SY, Scheffer L, Meinertzhagen IA, Chklovskii DB, de Polavieja GG. Wiring economy and volume exclusion determine neuronal placement in the Drosophila brain. Current Biology : Cb. 21: 2000-5. PMID 22119527 DOI: 10.1016/j.cub.2011.10.022  0.92
2011 Kleinfeld D, Bharioke A, Blinder P, Bock DD, Briggman KL, Chklovskii DB, Denk W, Helmstaedter M, Kaufhold JP, Lee WC, Meyer HS, Micheva KD, Oberlaender M, Prohaska S, Reid RC, et al. Large-scale automated histology in the pursuit of connectomes. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 16125-38. PMID 22072665 DOI: 10.1523/JNEUROSCI.4077-11.2011  0.92
2011 Varshney LR, Chen BL, Paniagua E, Hall DH, Chklovskii DB. Structural properties of the Caenorhabditis elegans neuronal network. Plos Computational Biology. 7: e1001066. PMID 21304930 DOI: 10.1371/journal.pcbi.1001066  0.92
2011 Glasner D, Hu T, Nunez-Iglesias J, Scheffer L, Xu S, Hess H, Fetter R, Chklovskii D, Basri R. High resolution segmentation of neuronal tissues from low depth-resolution em imagery Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 6819: 261-272. DOI: 10.1007/978-3-642-23094-3_19  0.92
2010 Mishchenko Y, Hu T, Spacek J, Mendenhall J, Harris KM, Chklovskii DB. Ultrastructural analysis of hippocampal neuropil from the connectomics perspective. Neuron. 67: 1009-20. PMID 20869597 DOI: 10.1016/j.neuron.2010.08.014  0.92
2010 Chklovskii DB, Vitaladevuni S, Scheffer LK. Semi-automated reconstruction of neural circuits using electron microscopy. Current Opinion in Neurobiology. 20: 667-75. PMID 20833533 DOI: 10.1016/j.conb.2010.08.002  0.4
2010 Veeraraghavan A, Genkin AV, Vitaladevuni S, Scheffer L, Xu S, Hess H, Fetter R, Cantoni M, Knott G, Chklovskii D. Increasing depth resolution of electron microscopy of neural circuits using sparse tomographic reconstruction Proceedings of the Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 1767-1774. DOI: 10.1109/CVPR.2010.5539846  0.92
2009 Wen Q, Stepanyants A, Elston GN, Grosberg AY, Chklovskii DB. Maximization of the connectivity repertoire as a statistical principle governing the shapes of dendritic arbors. Proceedings of the National Academy of Sciences of the United States of America. 106: 12536-41. PMID 19622738 DOI: 10.1073/pnas.0901530106  0.92
2008 Wen Q, Chklovskii DB. A cost-benefit analysis of neuronal morphology. Journal of Neurophysiology. 99: 2320-8. PMID 18305091 DOI: 10.1152/jn.00280.2007  0.92
2008 Stepanyants A, Hirsch JA, Martinez LM, Kisvárday ZF, Ferecskó AS, Chklovskii DB. Local potential connectivity in cat primary visual cortex. Cerebral Cortex (New York, N.Y. : 1991). 18: 13-28. PMID 17420172 DOI: 10.1093/cercor/bhm027  0.92
2008 Goodhill G, Baker C, Balasubramanian V, Bazhenov M, Beck J, Becker S, Bethge M, Boahen K, Boden M, Bonin V, Bouret S, Fairhall A, Flash T, French R, Gillies A, ... ... Chklovskii D, et al. Network: Computation in Neural Systems: Editorial Network: Computation in Neural Systems. 19: 1-2. DOI: 10.1080/09548980801915409  0.92
2007 Pérez-Escudero A, de Polavieja GG. Optimally wired subnetwork determines neuroanatomy of Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America. 104: 17180-5. PMID 17942697 DOI: 10.1073/pnas.0703183104  0.88
2006 Varshney LR, Sjöström PJ, Chklovskii DB. Optimal information storage in noisy synapses under resource constraints. Neuron. 52: 409-23. PMID 17088208 DOI: 10.1016/j.neuron.2006.10.017  0.92
2006 Chen BL, Hall DH, Chklovskii DB. Wiring optimization can relate neuronal structure and function. Proceedings of the National Academy of Sciences of the United States of America. 103: 4723-8. PMID 16537428 DOI: 10.1073/pnas.0506806103  0.92
2005 Wen Q, Chklovskii DB. Segregation of the brain into gray and white matter: a design minimizing conduction delays. Plos Computational Biology. 1: e78. PMID 16389299 DOI: 10.1371/journal.pcbi.0010078  0.92
2005 Stepanyants A, Chklovskii DB. Neurogeometry and potential synaptic connectivity. Trends in Neurosciences. 28: 387-94. PMID 15935485 DOI: 10.1016/j.tins.2005.05.006  0.92
2005 Shepherd GM, Stepanyants A, Bureau I, Chklovskii D, Svoboda K. Geometric and functional organization of cortical circuits. Nature Neuroscience. 8: 782-90. PMID 15880111 DOI: 10.1038/nn1447  0.92
2005 Song S, Sjöström PJ, Reigl M, Nelson S, Chklovskii DB. Highly nonrandom features of synaptic connectivity in local cortical circuits. Plos Biology. 3: e68. PMID 15737062 DOI: 10.1371/journal.pbio.0030068  0.92
2004 Reigl M, Alon U, Chklovskii DB. Search for computational modules in the C. elegans brain. Bmc Biology. 2: 25. PMID 15574204 DOI: 10.1186/1741-7007-2-25  0.44
2004 Chklovskii DB, Mel BW, Svoboda K. Cortical rewiring and information storage. Nature. 431: 782-8. PMID 15483599 DOI: 10.1038/nature03012  0.92
2004 Stepanyants A, Tamás G, Chklovskii DB. Class-specific features of neuronal wiring. Neuron. 43: 251-9. PMID 15260960 DOI: 10.1016/j.neuron.2004.06.013  0.92
2004 Chklovskii DB, Koulakov AA. Maps in the brain: what can we learn from them? Annual Review of Neuroscience. 27: 369-92. PMID 15217337 DOI: 10.1146/annurev.neuro.27.070203.144226  0.92
2004 Chklovskii D. Evolution as the blind engineer: Wiring minimization in the brain International Workshop On System Level Interconnect Prediction, Slip. 63.  0.92
2003 Chklovskii DB, Stepanyants A. Power-law for axon diameters at branch point. Bmc Neuroscience. 4: 18. PMID 12946281 DOI: 10.1186/1471-2202-4-18  0.92
2002 Milo R, Shen-Orr S, Itzkovitz S, Kashtan N, Chklovskii D, Alon U. Network motifs: simple building blocks of complex networks. Science (New York, N.Y.). 298: 824-7. PMID 12399590 DOI: 10.1126/science.298.5594.824  0.92
2002 Chklovskii DB, Schikorski T, Stevens CF. Wiring optimization in cortical circuits. Neuron. 34: 341-7. PMID 11988166 DOI: 10.1016/S0896-6273(02)00679-7  0.92
2002 Stepanyants A, Hof PR, Chklovskii DB. Geometry and structural plasticity of synaptic connectivity. Neuron. 34: 275-88. PMID 11970869 DOI: 10.1016/S0896-6273(02)00652-9  0.92
2001 Koulakov AA, Chklovskii DB. Orientation preference patterns in mammalian visual cortex: a wire length minimization approach. Neuron. 29: 519-27. PMID 11239440 DOI: 10.1016/S0896-6273(01)00223-9  0.92
1993 Chklovskii DB, Lee PA. Transport properties between quantum Hall plateaus. Physical Review. B, Condensed Matter. 48: 18060-18078. PMID 10008445  0.84
1993 Chklovskii DB, Matveev KA, Shklovskii BI. Ballistic conductance of interacting electrons in the quantum Hall regime. Physical Review. B, Condensed Matter. 47: 12605-12617. PMID 10005455 DOI: 10.1103/PhysRevB.47.12605  0.92
1992 Chklovskii DB, Shklovskii BI, Glazman LI. Erratum: Electrostatics of edge channels Physical Review. B, Condensed Matter. 46: 15606. PMID 10021571  0.76
1992 Chklovskii DB, Shklovskii BI, Glazman LI. Electrostatics of edge channels. Physical Review. B, Condensed Matter. 46: 4026-4034. PMID 10004131 DOI: 10.1103/PhysRevB.46.4026  0.92
1992 Chklovskii DB, Lee PA. Relaxation of nuclear spin in atomic hydrogen due to long-range orbital currents in metal walls. Physical Review. B, Condensed Matter. 45: 5240-5243. PMID 10000238  0.84
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