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Bruno Samori, Professor - Publications

Affiliations: 
Biochemistry Università di Bologna, Bologna, Italy 
Area:
Atomic force microscopy, protein folding
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51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Raspadori A, Vignali V, Murello A, Giachin G, Samorì B, Tanaka M, Bustamante C, Zuccheri G, Legname G. Evidence of Orientation-Dependent Early States of Prion Protein Misfolded Structures from Single Molecule Force Spectroscopy. Biology. 11. PMID 36138837 DOI: 10.3390/biology11091358  0.469
2014 Brucale M, Schuler B, Samorì B. Single-molecule studies of intrinsically disordered proteins. Chemical Reviews. 114: 3281-317. PMID 24432838 DOI: 10.1021/Cr400297G  0.303
2012 Pivato M, De Franceschi G, Tosatto L, Frare E, Kumar D, Aioanei D, Brucale M, Tessari I, Bisaglia M, Samori B, de Laureto PP, Bubacco L. Covalent α-synuclein dimers: chemico-physical and aggregation properties. Plos One. 7: e50027. PMID 23272053 DOI: 10.1371/Journal.Pone.0050027  0.303
2012 Brucale M, Tessari I, Bubacco L, Samorì B. Single-molecule force spectroscopy of chimeric polyprotein constructs containing intrinsically disordered domains. Methods in Molecular Biology (Clifton, N.J.). 896: 47-56. PMID 22821516 DOI: 10.1007/978-1-4614-3704-8_3  0.362
2012 Aioanei D, Brucale M, Tessari I, Bubacco L, Samorì B. Worm-like Ising model for protein mechanical unfolding under the effect of osmolytes. Biophysical Journal. 102: 342-50. PMID 22339871 DOI: 10.1016/J.Bpj.2011.12.007  0.338
2011 Aioanei D, Tessari I, Bubacco L, Samorì B, Brucale M. Observing the osmophobic effect in action at the single molecule level. Proteins. 79: 2214-23. PMID 21557325 DOI: 10.1002/Prot.23045  0.362
2011 Aioanei D, Brucale M, Samorí B. Open source platform for the execution and analysis of mechanical refolding experiments. Bioinformatics (Oxford, England). 27: 423-5. PMID 21123222 DOI: 10.1093/Bioinformatics/Btq663  0.393
2009 Aioanei D, Samorì B, Brucale M. Maximum likelihood estimation of protein kinetic parameters under weak assumptions from unfolding force spectroscopy experiments. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 80: 061916. PMID 20365199 DOI: 10.1103/Physreve.80.061916  0.369
2009 Materassi D, Baschieri P, Tiribilli B, Zuccheri G, Samorì B. An open source/real-time atomic force microscope architecture to perform customizable force spectroscopy experiments. The Review of Scientific Instruments. 80: 084301. PMID 19725671 DOI: 10.1063/1.3194046  0.358
2009 Sorce B, Sabella S, Sandal M, Samorì B, Santino A, Cingolani R, Rinaldi R, Pompa PP. Single-molecule mechanical unfolding of amyloidogenic beta2-microglobulin: the force-spectroscopy approach. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 10: 1471-7. PMID 19496082 DOI: 10.1002/Cphc.200900220  0.768
2009 Sandal M, Benedetti F, Brucale M, Gomez-Casado A, Samorì B. Hooke: an open software platform for force spectroscopy. Bioinformatics (Oxford, England). 25: 1428-30. PMID 19336443 DOI: 10.1093/Bioinformatics/Btp180  0.731
2009 Carrara S, Benini L, Bhalla V, Stagni C, Ferretti A, Cavallini A, Riccò B, Samorì B. New insights for using self-assembly materials to improve the detection stability in label-free DNA-chip and immuno-sensors. Biosensors & Bioelectronics. 24: 3425-9. PMID 19121929 DOI: 10.1016/J.Bios.2008.11.014  0.309
2009 Brucale M, Sandal M, Di Maio S, Rampioni A, Tessari I, Tosatto L, Bisaglia M, Bubacco L, Samorì B. Pathogenic mutations shift the equilibria of alpha-synuclein single molecules towards structured conformers. Chembiochem : a European Journal of Chemical Biology. 10: 176-83. PMID 19067456 DOI: 10.1002/Cbic.200800581  0.745
2009 Gazzola D, Samorì B. Development of the Electrochemical Biochip The International Journal of Biological Markers. 24: 184-184. DOI: 10.1177/172460080902400310  0.311
2008 Valle F, Zuccheri G, Bergia A, Ayres L, Rowan AE, Nolte RJ, Samorì B. A polymeric molecular "handle" for multiple AFM-based single-molecule force measurements. Angewandte Chemie (International Ed. in English). 47: 2431-4. PMID 18246564 DOI: 10.1002/Anie.200704526  0.362
2008 Sandal M, Valle F, Tessari I, Mammi S, Bergantino E, Musiani F, Brucale M, Bubacco L, Samorì B. Conformational equilibria in monomeric alpha-synuclein at the single-molecule level. Plos Biology. 6: e6. PMID 18198943 DOI: 10.1371/Journal.Pbio.0060006  0.761
2007 Kolaric B, Sliwa M, Brucale M, Vallée RA, Zuccheri G, Samori B, Hofkens J, De Schryver FC. Single molecule fluorescence spectroscopy of pH sensitive oligonucleotide switches. Photochemical & Photobiological Sciences : Official Journal of the European Photochemistry Association and the European Society For Photobiology. 6: 614-8. PMID 17549262 DOI: 10.1039/B618689K  0.34
2007 Valle F, Sandal M, Samorì B. The interplay between chemistry and mechanics in the transduction of a mechanical signal into a biochemical function Physics of Life Reviews. 4: 157-188. DOI: 10.1016/J.Plrev.2007.06.001  0.75
2006 Grandi F, Sandal M, Guarguaglini G, Capriotti E, Casadio R, Samorì B. Hierarchical mechanochemical switches in angiostatin. Chembiochem : a European Journal of Chemical Biology. 7: 1774-82. PMID 16991168 DOI: 10.1002/Cbic.200600227  0.761
2006 Sandal M, Grandi F, Samorì B. Single molecule force spectroscopy discovers mechanochemical switches in biology: The case of the disulfide bond Polymer. 47: 2571-2579. DOI: 10.1016/J.Polymer.2005.12.084  0.769
2006 Grandi F, Sandal M, Guarguaglini G, Capriotti E, Casadio R, Samorì B. Cover Picture: Hierarchical Mechanochemical Switches in Angiostatin (ChemBioChem 11/2006) Chembiochem. 7: 1629-1629. DOI: 10.1002/Cbic.200690033  0.725
2005 Ficarra E, Masotti D, Macii E, Benini L, Zuccheri G, Samorì B. Automatic intrinsic DNA curvature computation from AFM images. Ieee Transactions On Bio-Medical Engineering. 52: 2074-86. PMID 16366230 DOI: 10.1109/Tbme.2005.857666  0.349
2005 Samorì B, Zuccheri G, Baschieri R. Protein unfolding and refolding under force: methodologies for nanomechanics. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 6: 29-34. PMID 15688640 DOI: 10.1002/Cphc.200400343  0.385
2005 Samorì B, Zuccheri G. DNA codes for nanoscience. Angewandte Chemie (International Ed. in English). 44: 1166-81. PMID 15532060 DOI: 10.1002/Anie.200400652  0.31
2004 Giro A, Bergia A, Zuccheri G, Bink HH, Pleij CW, Samorì B. Single molecule studies of RNA secondary structure: AFM of TYMV viral RNA. Microscopy Research and Technique. 65: 235-45. PMID 15630685 DOI: 10.1002/Jemt.20123  0.319
2003 Bustanji Y, Arciola CR, Conti M, Mandello E, Montanaro L, Samorí B. Dynamics of the interaction between a fibronectin molecule and a living bacterium under mechanical force. Proceedings of the National Academy of Sciences of the United States of America. 100: 13292-7. PMID 14573699 DOI: 10.1073/Pnas.1735343100  0.339
2002 Bustanji Y, Samorì B. The mechanical properties of human angiostatin can be modulated by means of its disulfide bonds: a single-molecule force-spectroscopy study. Angewandte Chemie (International Ed. in English). 41: 1546-8. PMID 19750660 DOI: 10.1002/1521-3773(20020503)41:9<1546::Aid-Anie1546>3.0.Co;2-U  0.303
2002 Scipioni A, Anselmi C, Zuccheri G, Samori B, De Santis P. Sequence-dependent DNA curvature and flexibility from scanning force microscopy images. Biophysical Journal. 83: 2408-18. PMID 12414677 DOI: 10.1016/S0006-3495(02)75254-5  0.322
2002 Sampaolese B, Bergia A, Scipioni A, Zuccheri G, Savino M, Samori B, De Santis P. Recognition of the DNA sequence by an inorganic crystal surface. Proceedings of the National Academy of Sciences of the United States of America. 99: 13566-70. PMID 12361979 DOI: 10.1073/Pnas.202471699  0.313
2002 Conti M, Donati G, Cianciolo G, Stefoni S, Samorì B. Force spectroscopy study of the adhesion of plasma proteins to the surface of a dialysis membrane: role of the nanoscale surface hydrophobicity and topography. Journal of Biomedical Materials Research. 61: 370-9. PMID 12115462 DOI: 10.1002/Jbm.10168  0.34
2002 Zuccheri G, Samorì B. Scanning force microscopy studies on the structure and dynamics of single DNA molecules. Methods in Cell Biology. 68: 357-95. PMID 12053739 DOI: 10.1016/S0091-679X(02)68018-5  0.407
2002 Nagami F, Zuccheri G, Samorì B, Kuroda R. Time-lapse imaging of conformational changes in supercoiled DNA by scanning force microscopy. Analytical Biochemistry. 300: 170-6. PMID 11779108 DOI: 10.1006/Abio.2001.5435  0.355
2001 Conti M, Bustanji Y, Falini G, Ferruti P, Stefoni S, Samorì B. The desorption process of macromolecules adsorbed on interfaces: the force spectroscopy approach. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 2: 610-3. PMID 23686879 DOI: 10.1002/1439-7641(20011015)2:10<610::Aid-Cphc610>3.0.Co;2-6  0.349
2001 Zuccheri G, Bergia A, Gallinella G, Musiani M, Samorì B. Scanning force microscopy study on a single-stranded DNA: the genome of parvovirus B19. Chembiochem : a European Journal of Chemical Biology. 2: 199-204. PMID 11828445 DOI: 10.1002/1439-7633(20010302)2:3<199::Aid-Cbic199>3.0.Co;2-8  0.374
2001 Zuccheri G, Scipioni A, Cavaliere V, Gargiulo G, De Santis P, Samorì B. Mapping the intrinsic curvature and flexibility along the DNA chain. Proceedings of the National Academy of Sciences of the United States of America. 98: 3074-9. PMID 11248034 DOI: 10.1073/Pnas.051631198  0.343
2000 Samorì B. Stretching single molecules along unbinding and unfolding pathways with the scanning force microscope. Chemistry (Weinheim An Der Bergstrasse, Germany). 6: 4249-55. PMID 11140954 DOI: 10.1002/1521-3765(20001201)6:23<4249::Aid-Chem4249>3.0.Co;2-Y  0.423
2000 Barbieri L, Valbonesi P, Righi F, Zuccheri G, Monti F, Gorini P, Samorí B, Stirpe F. Polynucleotide:Adenosine glycosidase is the sole activity of ribosome-inactivating proteins on DNA. Journal of Biochemistry. 128: 883-9. PMID 11056402 DOI: 10.1093/Oxfordjournals.Jbchem.A022827  0.317
2000 Conti M, Falini G, Samorì B. How Strong Is the Coordination Bond between a Histidine Tag and Ni - Nitrilotriacetate? An Experiment of Mechanochemistry on Single Molecules. Angewandte Chemie (International Ed. in English). 39: 215-218. PMID 10649380 DOI: 10.1002/(Sici)1521-3757(20000103)112:1<221::Aid-Ange221>3.0.Co;2-M  0.388
1998 Samorì B. Stretching, Tearing, and Dissecting Single Molecules of DNA. Angewandte Chemie (International Ed. in English). 37: 2198-2200. PMID 29711459 DOI: 10.1002/(Sici)1521-3773(19980904)37:16<2198::Aid-Anie2198>3.0.Co;2-Y  0.416
1998 Zuccheri G, Dame R, Aquila M, Muzzalupo I, Samorì B. Conformational fluctuations of supercoiled DNA molecules observed in real time with a scanning force microscope Applied Physics a: Materials Science & Processing. 66: S585-S589. DOI: 10.1007/S003390051206  0.652
1997 Bustamante C, Zuccheri G, Leuba SH, Yang G, Samori B. Visualization and analysis of chromatin by scanning force microscopy. Methods (San Diego, Calif.). 12: 73-83. PMID 9169197 DOI: 10.1006/Meth.1997.0449  0.477
1996 Samori B, Nigro C, Gordano A, Muzzalupo I, Quagliariello C. Trapping and Imaging Molecular Dynamics by Combining Scanning Force Microscopy with Topology Angewandte Chemie International Edition in English. 35: 529-530. DOI: 10.1002/Anie.199605291  0.331
1995 Muzzalupo I, Nigro C, Zuccheri G, Samorì B, Quagliariello C, Buttinelli M. Deposition on mica and scanning force microscopy imaging of DNA molecules whose original B structure is retained Journal of Vacuum Science & Technology a: Vacuum, Surfaces, and Films. 13: 1752-1754. DOI: 10.1116/1.579764  0.362
1994 Leuba SH, Yang G, Robert C, Samori B, van Holde K, Zlatanova J, Bustamante C. Three-dimensional structure of extended chromatin fibers as revealed by tapping-mode scanning force microscopy. Proceedings of the National Academy of Sciences of the United States of America. 91: 11621-5. PMID 7972114 DOI: 10.1073/Pnas.91.24.11621  0.461
1993 Samorí B, Siligardi G, Quagliariello C, Weisenhorn AL, Vesenka J, Bustamante CJ. Chirality of DNA supercoiling assigned by scanning force microscopy. Proceedings of the National Academy of Sciences of the United States of America. 90: 3598-601. PMID 8475108 DOI: 10.1073/Pnas.90.8.3598  0.565
1993 Samori B, Siligardi G, Quagliarello C, Weisenhorn AL, Vesenka J, Bustamante CJ. Chirality of the local supercoiling of individual DNA molecules assigned by atomic force microscopy Proceedings of Spie. 1855: 12-16. DOI: 10.1117/12.146374  0.544
1993 Samori B, Nigro C, Armentano V, Cimieri S, Zuccheri G, Quagliariello C. DNA Supercoiling Imaged in Three Dimensions by Scanning Force Microscopy Angewandte Chemie International Edition in English. 32: 1461-1463. DOI: 10.1002/Anie.199314611  0.335
1992 Erokhin V, Popov B, Samori B, Yakovlev A. Immobilization of DNA Fragments by Langmuir-Blodgett Technique Molecular Crystals and Liquid Crystals Science and Technology. Section a. Molecular Crystals and Liquid Crystals. 215: 213-220. DOI: 10.1080/10587259208038527  0.305
1991 Bustamante C, Samorì B, Builes E. Daunomycin inverts the long-range chirality of DNA condensed states. Biochemistry. 30: 5661-6. PMID 2043609 DOI: 10.1021/Bi00237A004  0.503
1988 Spada GP, Gottarelli G, Samori B, Bustamante CJ, Wells KS. A study of some lyotropic cholesteric mesophases by circular and linear dichroism and by circular intensity differential scattering Liquid Crystals. 3: 101-113. DOI: 10.1080/02678298808086353  0.443
1984 Bustamante CJ, Wells KS, Keller D, Samori B, Maestre MF, Tinoco I. The Circular Intensity Differential Scattering (CIDS) of Cholesteric and Blue Mesophases Molecular Crystals and Liquid Crystals. 111: 79-102. DOI: 10.1080/00268948408082177  0.571
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